BLASTX nr result
ID: Rehmannia28_contig00015606
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia28_contig00015606
(738 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ALT31536.1| mediator of RNA polymerase II transcription subun... 418 e-145
ref|XP_011077190.1| PREDICTED: mediator of RNA polymerase II tra... 341 e-109
ref|XP_012846171.1| PREDICTED: mediator of RNA polymerase II tra... 326 e-104
gb|EYU29950.1| hypothetical protein MIMGU_mgv1a001668mg [Erythra... 326 e-104
ref|XP_012846170.1| PREDICTED: mediator of RNA polymerase II tra... 326 e-104
ref|XP_011070829.1| PREDICTED: mediator of RNA polymerase II tra... 317 e-100
emb|CBI27055.3| unnamed protein product [Vitis vinifera] 297 3e-92
ref|XP_002278845.1| PREDICTED: mediator of RNA polymerase II tra... 297 4e-92
gb|EPS74095.1| hypothetical protein M569_00660, partial [Genlise... 289 5e-92
ref|XP_008243186.1| PREDICTED: LOW QUALITY PROTEIN: mediator of ... 295 3e-91
gb|KDO70071.1| hypothetical protein CISIN_1g003284mg [Citrus sin... 289 3e-91
gb|KDO70072.1| hypothetical protein CISIN_1g003284mg [Citrus sin... 289 5e-91
gb|KHG24986.1| Mediator of RNA polymerase II transcription subun... 294 5e-91
ref|XP_012478636.1| PREDICTED: mediator of RNA polymerase II tra... 294 6e-91
ref|XP_009771929.1| PREDICTED: mediator of RNA polymerase II tra... 293 2e-90
ref|XP_011021763.1| PREDICTED: mediator of RNA polymerase II tra... 292 4e-90
ref|XP_007046292.1| Phytochrome and flowering time regulatory pr... 292 4e-90
gb|KJB80075.1| hypothetical protein B456_013G080300 [Gossypium r... 288 5e-90
ref|XP_007046291.1| Phytochrome and flowering time regulatory pr... 292 5e-90
ref|XP_002311445.2| hypothetical protein POPTR_0008s11650g [Popu... 293 5e-90
>gb|ALT31536.1| mediator of RNA polymerase II transcription subunit 25-like
protein, partial [Rehmannia glutinosa]
Length = 315
Score = 418 bits (1074), Expect = e-145
Identities = 210/237 (88%), Positives = 210/237 (88%), Gaps = 25/237 (10%)
Frame = +2
Query: 101 SQSVLKKNFLGTITKTGNWLRNFKQHMVPKQLIVAVEGTAAIGPFWQTIVSDYLDKIIRC 280
SQSVLKKNFLGTITKTGNWLRN KQHMVPKQLIVAVEGTAAIGPFWQTIVSDYLDKIIRC
Sbjct: 7 SQSVLKKNFLGTITKTGNWLRNSKQHMVPKQLIVAVEGTAAIGPFWQTIVSDYLDKIIRC 66
Query: 281 FCGNESLGQKPTTSQVELSLVMFNAHGSYSACLVQRSGWTKDMDIFFQWLSAI------- 439
FCGNESLGQKPTTSQVELSLVMFNAHGSYSACLVQRSGWTKDMDIFFQWLSAI
Sbjct: 67 FCGNESLGQKPTTSQVELSLVMFNAHGSYSACLVQRSGWTKDMDIFFQWLSAIPLAGGGF 126
Query: 440 ------------------PXGNQNQNVDGQRHCILVAASNPYPLPTPVYRPQPQNIEQSE 565
P GNQNQNVDGQRHCILVAASNPYPLPTPVYRPQPQNIEQSE
Sbjct: 127 NDAAIAEGLAEALTMFSSPSGNQNQNVDGQRHCILVAASNPYPLPTPVYRPQPQNIEQSE 186
Query: 566 NIETQPDNRLSDAEALAKSFAQCAISLSVICPKKLPKLRAIYNAGKRNPRAADPPVD 736
NIETQPDNRLSDAEALAKSFAQCAISLSVICPKKLPKLRAIYNAGKRNPRAADPPVD
Sbjct: 187 NIETQPDNRLSDAEALAKSFAQCAISLSVICPKKLPKLRAIYNAGKRNPRAADPPVD 243
>ref|XP_011077190.1| PREDICTED: mediator of RNA polymerase II transcription subunit
25-like [Sesamum indicum]
Length = 806
Score = 341 bits (875), Expect = e-109
Identities = 170/211 (80%), Positives = 179/211 (84%), Gaps = 25/211 (11%)
Frame = +2
Query: 179 MVPKQLIVAVEGTAAIGPFWQTIVSDYLDKIIRCFCGNESLGQKPTTSQVELSLVMFNAH 358
MVPKQLIVAVEGTAA+GPFWQTIVSDYLDKIIRCFCGNES GQKP+TSQVELSLVMFNAH
Sbjct: 1 MVPKQLIVAVEGTAAVGPFWQTIVSDYLDKIIRCFCGNESTGQKPSTSQVELSLVMFNAH 60
Query: 359 GSYSACLVQRSGWTKDMDIFFQWLSAIPX-------------------------GNQNQN 463
GSY ACLVQRSGWT+DMDIFFQWLSAIP G+Q QN
Sbjct: 61 GSYCACLVQRSGWTRDMDIFFQWLSAIPFAGGGFNDAAIAEGLAEALMMFSSPNGSQIQN 120
Query: 464 VDGQRHCILVAASNPYPLPTPVYRPQPQNIEQSENIETQPDNRLSDAEALAKSFAQCAIS 643
+DGQRHCILVAASNPYPLPTPVYRPQPQN+EQS+NIE+QPDNRLSDAEALAKSFAQ IS
Sbjct: 121 MDGQRHCILVAASNPYPLPTPVYRPQPQNLEQSDNIESQPDNRLSDAEALAKSFAQFGIS 180
Query: 644 LSVICPKKLPKLRAIYNAGKRNPRAADPPVD 736
LS+ICPKKLPKLRAIYNAGKRN RAADPPVD
Sbjct: 181 LSIICPKKLPKLRAIYNAGKRNARAADPPVD 211
>ref|XP_012846171.1| PREDICTED: mediator of RNA polymerase II transcription subunit 25
isoform X2 [Erythranthe guttata]
Length = 756
Score = 326 bits (836), Expect = e-104
Identities = 161/211 (76%), Positives = 173/211 (81%), Gaps = 25/211 (11%)
Frame = +2
Query: 179 MVPKQLIVAVEGTAAIGPFWQTIVSDYLDKIIRCFCGNESLGQKPTTSQVELSLVMFNAH 358
MVPKQLIVAVEGTAAIGPFWQTIVSDYLDKIIR FCGNE GQKP T+ ELSLVMFNAH
Sbjct: 1 MVPKQLIVAVEGTAAIGPFWQTIVSDYLDKIIRSFCGNEPTGQKPATTHFELSLVMFNAH 60
Query: 359 GSYSACLVQRSGWTKDMDIFFQWLSAIPX-------------------------GNQNQN 463
GSYSACLVQRSGWTKDMDIFFQWLSAIP GNQNQN
Sbjct: 61 GSYSACLVQRSGWTKDMDIFFQWLSAIPFAGGGFNDAAIAEGLSEALMMFSSPKGNQNQN 120
Query: 464 VDGQRHCILVAASNPYPLPTPVYRPQPQNIEQSENIETQPDNRLSDAEALAKSFAQCAIS 643
V+GQRHCIL+AASNPYPLPTPV+RPQ QN E+++ +E+QPDNRLSDAE LAKSFAQCA+S
Sbjct: 121 VEGQRHCILIAASNPYPLPTPVFRPQIQNPEKNDGVESQPDNRLSDAETLAKSFAQCAVS 180
Query: 644 LSVICPKKLPKLRAIYNAGKRNPRAADPPVD 736
LSVICPK+LPKLR I+NAGKRNPRA DPPVD
Sbjct: 181 LSVICPKQLPKLRGIFNAGKRNPRAPDPPVD 211
>gb|EYU29950.1| hypothetical protein MIMGU_mgv1a001668mg [Erythranthe guttata]
Length = 757
Score = 326 bits (836), Expect = e-104
Identities = 161/211 (76%), Positives = 173/211 (81%), Gaps = 25/211 (11%)
Frame = +2
Query: 179 MVPKQLIVAVEGTAAIGPFWQTIVSDYLDKIIRCFCGNESLGQKPTTSQVELSLVMFNAH 358
MVPKQLIVAVEGTAAIGPFWQTIVSDYLDKIIR FCGNE GQKP T+ ELSLVMFNAH
Sbjct: 1 MVPKQLIVAVEGTAAIGPFWQTIVSDYLDKIIRSFCGNEPTGQKPATTHFELSLVMFNAH 60
Query: 359 GSYSACLVQRSGWTKDMDIFFQWLSAIPX-------------------------GNQNQN 463
GSYSACLVQRSGWTKDMDIFFQWLSAIP GNQNQN
Sbjct: 61 GSYSACLVQRSGWTKDMDIFFQWLSAIPFAGGGFNDAAIAEGLSEALMMFSSPKGNQNQN 120
Query: 464 VDGQRHCILVAASNPYPLPTPVYRPQPQNIEQSENIETQPDNRLSDAEALAKSFAQCAIS 643
V+GQRHCIL+AASNPYPLPTPV+RPQ QN E+++ +E+QPDNRLSDAE LAKSFAQCA+S
Sbjct: 121 VEGQRHCILIAASNPYPLPTPVFRPQIQNPEKNDGVESQPDNRLSDAETLAKSFAQCAVS 180
Query: 644 LSVICPKKLPKLRAIYNAGKRNPRAADPPVD 736
LSVICPK+LPKLR I+NAGKRNPRA DPPVD
Sbjct: 181 LSVICPKQLPKLRGIFNAGKRNPRAPDPPVD 211
>ref|XP_012846170.1| PREDICTED: mediator of RNA polymerase II transcription subunit 25
isoform X1 [Erythranthe guttata]
gi|604318457|gb|EYU29949.1| hypothetical protein
MIMGU_mgv1a001668mg [Erythranthe guttata]
Length = 777
Score = 326 bits (836), Expect = e-104
Identities = 161/211 (76%), Positives = 173/211 (81%), Gaps = 25/211 (11%)
Frame = +2
Query: 179 MVPKQLIVAVEGTAAIGPFWQTIVSDYLDKIIRCFCGNESLGQKPTTSQVELSLVMFNAH 358
MVPKQLIVAVEGTAAIGPFWQTIVSDYLDKIIR FCGNE GQKP T+ ELSLVMFNAH
Sbjct: 1 MVPKQLIVAVEGTAAIGPFWQTIVSDYLDKIIRSFCGNEPTGQKPATTHFELSLVMFNAH 60
Query: 359 GSYSACLVQRSGWTKDMDIFFQWLSAIPX-------------------------GNQNQN 463
GSYSACLVQRSGWTKDMDIFFQWLSAIP GNQNQN
Sbjct: 61 GSYSACLVQRSGWTKDMDIFFQWLSAIPFAGGGFNDAAIAEGLSEALMMFSSPKGNQNQN 120
Query: 464 VDGQRHCILVAASNPYPLPTPVYRPQPQNIEQSENIETQPDNRLSDAEALAKSFAQCAIS 643
V+GQRHCIL+AASNPYPLPTPV+RPQ QN E+++ +E+QPDNRLSDAE LAKSFAQCA+S
Sbjct: 121 VEGQRHCILIAASNPYPLPTPVFRPQIQNPEKNDGVESQPDNRLSDAETLAKSFAQCAVS 180
Query: 644 LSVICPKKLPKLRAIYNAGKRNPRAADPPVD 736
LSVICPK+LPKLR I+NAGKRNPRA DPPVD
Sbjct: 181 LSVICPKQLPKLRGIFNAGKRNPRAPDPPVD 211
>ref|XP_011070829.1| PREDICTED: mediator of RNA polymerase II transcription subunit
25-like [Sesamum indicum]
Length = 788
Score = 317 bits (811), Expect = e-100
Identities = 160/211 (75%), Positives = 171/211 (81%), Gaps = 25/211 (11%)
Frame = +2
Query: 179 MVPKQLIVAVEGTAAIGPFWQTIVSDYLDKIIRCFCGNESLGQKPTTSQVELSLVMFNAH 358
M PKQL+VAVEGTAAIGPFWQTIVSDYLDKIIRCF GNE GQK + + VELSLVMFNAH
Sbjct: 1 MSPKQLVVAVEGTAAIGPFWQTIVSDYLDKIIRCFFGNEPTGQKSSMTPVELSLVMFNAH 60
Query: 359 GSYSACLVQRSGWTKDMDIFFQWLSAIPX-------------------------GNQNQN 463
GSYSACLVQRSGWT+DMDIFFQWL AIP GNQNQ
Sbjct: 61 GSYSACLVQRSGWTRDMDIFFQWLQAIPFAGGGFNDAAIAEGLAEALMMFSSTSGNQNQI 120
Query: 464 VDGQRHCILVAASNPYPLPTPVYRPQPQNIEQSENIETQPDNRLSDAEALAKSFAQCAIS 643
V+GQRHCILVAASNPYPLPTPVYRPQPQN E+S+++ETQPDN LSDAE LAKSFAQ AIS
Sbjct: 121 VEGQRHCILVAASNPYPLPTPVYRPQPQNPEKSDSMETQPDNCLSDAETLAKSFAQFAIS 180
Query: 644 LSVICPKKLPKLRAIYNAGKRNPRAADPPVD 736
LSVICPK+LPKLR IYNAGKRNPRAA+PPVD
Sbjct: 181 LSVICPKQLPKLRGIYNAGKRNPRAAEPPVD 211
>emb|CBI27055.3| unnamed protein product [Vitis vinifera]
Length = 815
Score = 297 bits (760), Expect = 3e-92
Identities = 145/213 (68%), Positives = 171/213 (80%), Gaps = 27/213 (12%)
Frame = +2
Query: 179 MVPKQLIVAVEGTAAIGPFWQTIVSDYLDKIIRCFCGNESLGQKPTTSQVELSLVMFNAH 358
M KQL+VAVEGTAA+GP+WQ +VSDYLDKIIR FCGNE GQKP++S ELSLVMFNAH
Sbjct: 1 MAEKQLVVAVEGTAAMGPYWQAVVSDYLDKIIRYFCGNELAGQKPSSSNFELSLVMFNAH 60
Query: 359 GSYSACLVQRSGWTKDMDIFFQWLSAIPX--------------------------GNQNQ 460
GSY +CLVQRSGWT+D+D+F QWLSA+P G+Q Q
Sbjct: 61 GSYCSCLVQRSGWTRDVDLFLQWLSALPFAGGGFNDAAIAEGLAEALMMFSVAANGSQTQ 120
Query: 461 -NVDGQRHCILVAASNPYPLPTPVYRPQPQNIEQSENIETQPDNRLSDAEALAKSFAQCA 637
NVDGQRHCILVAA+NPYPLPTPVY+PQ QN+EQ+E+IE+Q ++RLSDAEA+AKSFAQC+
Sbjct: 121 QNVDGQRHCILVAANNPYPLPTPVYQPQMQNMEQNESIESQTESRLSDAEAVAKSFAQCS 180
Query: 638 ISLSVICPKKLPKLRAIYNAGKRNPRAADPPVD 736
+SLSVICPK+LPKL++IYNAGKRNPR ADPPVD
Sbjct: 181 VSLSVICPKQLPKLKSIYNAGKRNPRVADPPVD 213
>ref|XP_002278845.1| PREDICTED: mediator of RNA polymerase II transcription subunit 25
[Vitis vinifera]
Length = 827
Score = 297 bits (760), Expect = 4e-92
Identities = 145/213 (68%), Positives = 171/213 (80%), Gaps = 27/213 (12%)
Frame = +2
Query: 179 MVPKQLIVAVEGTAAIGPFWQTIVSDYLDKIIRCFCGNESLGQKPTTSQVELSLVMFNAH 358
M KQL+VAVEGTAA+GP+WQ +VSDYLDKIIR FCGNE GQKP++S ELSLVMFNAH
Sbjct: 1 MAEKQLVVAVEGTAAMGPYWQAVVSDYLDKIIRYFCGNELAGQKPSSSNFELSLVMFNAH 60
Query: 359 GSYSACLVQRSGWTKDMDIFFQWLSAIPX--------------------------GNQNQ 460
GSY +CLVQRSGWT+D+D+F QWLSA+P G+Q Q
Sbjct: 61 GSYCSCLVQRSGWTRDVDLFLQWLSALPFAGGGFNDAAIAEGLAEALMMFSVAANGSQTQ 120
Query: 461 -NVDGQRHCILVAASNPYPLPTPVYRPQPQNIEQSENIETQPDNRLSDAEALAKSFAQCA 637
NVDGQRHCILVAA+NPYPLPTPVY+PQ QN+EQ+E+IE+Q ++RLSDAEA+AKSFAQC+
Sbjct: 121 QNVDGQRHCILVAANNPYPLPTPVYQPQMQNMEQNESIESQTESRLSDAEAVAKSFAQCS 180
Query: 638 ISLSVICPKKLPKLRAIYNAGKRNPRAADPPVD 736
+SLSVICPK+LPKL++IYNAGKRNPR ADPPVD
Sbjct: 181 VSLSVICPKQLPKLKSIYNAGKRNPRVADPPVD 213
>gb|EPS74095.1| hypothetical protein M569_00660, partial [Genlisea aurea]
Length = 527
Score = 289 bits (739), Expect = 5e-92
Identities = 144/211 (68%), Positives = 164/211 (77%), Gaps = 25/211 (11%)
Frame = +2
Query: 179 MVPKQLIVAVEGTAAIGPFWQTIVSDYLDKIIRCFCGNESLGQKPTTSQVELSLVMFNAH 358
MV KQLI+AVEGTA++GPFW+TI+SDYLDKIIR CG+E +GQKP + VELSLVMFNAH
Sbjct: 1 MVTKQLIIAVEGTASLGPFWKTILSDYLDKIIRFLCGSEPVGQKPPNTHVELSLVMFNAH 60
Query: 359 GSYSACLVQRSGWTKDMDIFFQWLSAI-------------------------PXGNQNQN 463
G YSA LVQRSGWTKDMD++FQWLSAI P GNQNQN
Sbjct: 61 GPYSAFLVQRSGWTKDMDLYFQWLSAIPFSGGGFNDAAITEGLSEVLMMFSSPNGNQNQN 120
Query: 464 VDGQRHCILVAASNPYPLPTPVYRPQPQNIEQSENIETQPDNRLSDAEALAKSFAQCAIS 643
+ QRHCILV+ASNPYPLPTPVYRPQ N E++EN+E+Q +N LSDAE LAKSF QC IS
Sbjct: 121 AEVQRHCILVSASNPYPLPTPVYRPQ-MNQEKTENVESQAENHLSDAETLAKSFPQCGIS 179
Query: 644 LSVICPKKLPKLRAIYNAGKRNPRAADPPVD 736
LSVICPK+LPKLR IYNAGK+NPRA DPPV+
Sbjct: 180 LSVICPKQLPKLRGIYNAGKQNPRAGDPPVE 210
>ref|XP_008243186.1| PREDICTED: LOW QUALITY PROTEIN: mediator of RNA polymerase II
transcription subunit 25 [Prunus mume]
Length = 868
Score = 295 bits (756), Expect = 3e-91
Identities = 145/213 (68%), Positives = 166/213 (77%), Gaps = 27/213 (12%)
Frame = +2
Query: 179 MVPKQLIVAVEGTAAIGPFWQTIVSDYLDKIIRCFCGNESLGQKPTTSQVELSLVMFNAH 358
M KQLIVAVEGTAA+GP+W T++SDYLDKIIRCFCGNE GQKP+TS VELSLV F H
Sbjct: 1 MAEKQLIVAVEGTAAMGPYWSTVISDYLDKIIRCFCGNELNGQKPSTSTVELSLVTFYTH 60
Query: 359 GSYSACLVQRSGWTKDMDIFFQWLSAIPX--------------------------GNQNQ 460
GSY CLVQRSGWT+D+D+F QWLSAIP GNQNQ
Sbjct: 61 GSYCGCLVQRSGWTRDLDLFLQWLSAIPFSGGGFSDAAIAEGLSEALMMFPTVQNGNQNQ 120
Query: 461 -NVDGQRHCILVAASNPYPLPTPVYRPQPQNIEQSENIETQPDNRLSDAEALAKSFAQCA 637
NVD Q+HCIL+AASNP+PLPTPVYRPQ QN+EQ+E+I+ Q +NRL DAEA+AKSF QC+
Sbjct: 121 QNVDCQKHCILIAASNPHPLPTPVYRPQLQNLEQNESIDAQTENRLYDAEAVAKSFPQCS 180
Query: 638 ISLSVICPKKLPKLRAIYNAGKRNPRAADPPVD 736
+SLSVICPK+LPKLRAIYNAGKRNPR ADPP+D
Sbjct: 181 VSLSVICPKQLPKLRAIYNAGKRNPRVADPPID 213
>gb|KDO70071.1| hypothetical protein CISIN_1g003284mg [Citrus sinensis]
Length = 601
Score = 289 bits (739), Expect = 3e-91
Identities = 146/213 (68%), Positives = 163/213 (76%), Gaps = 27/213 (12%)
Frame = +2
Query: 179 MVPKQLIVAVEGTAAIGPFWQTIVSDYLDKIIRCFCGNESLGQKPTTSQVELSLVMFNAH 358
M KQLIVAVEGTAA+GP+WQ+IVSDYL+KIIRCFC NE GQK + S VELSLV FN H
Sbjct: 1 MSEKQLIVAVEGTAAMGPYWQSIVSDYLEKIIRCFCVNELAGQKTSASNVELSLVTFNTH 60
Query: 359 GSYSACLVQRSGWTKDMDIFFQWLSAIPX--------------------------GNQNQ 460
GSY ACLVQRSGWTKD+DIF WLS IP G+QNQ
Sbjct: 61 GSYCACLVQRSGWTKDVDIFLHWLSTIPFAGGGFNDAAIAEGLSEALMMFSVAPNGSQNQ 120
Query: 461 -NVDGQRHCILVAASNPYPLPTPVYRPQPQNIEQSENIETQPDNRLSDAEALAKSFAQCA 637
NVDGQRHCILVAASNP+PLPTPVYRPQ QN++Q+EN E Q ++RLSDAE +AKSF QC+
Sbjct: 121 QNVDGQRHCILVAASNPHPLPTPVYRPQMQNLDQNENNEAQAESRLSDAETVAKSFVQCS 180
Query: 638 ISLSVICPKKLPKLRAIYNAGKRNPRAADPPVD 736
+SLSVICPK+LPKL AIYNA KRNPRAADPPVD
Sbjct: 181 VSLSVICPKQLPKLTAIYNAAKRNPRAADPPVD 213
>gb|KDO70072.1| hypothetical protein CISIN_1g003284mg [Citrus sinensis]
Length = 619
Score = 289 bits (739), Expect = 5e-91
Identities = 146/213 (68%), Positives = 163/213 (76%), Gaps = 27/213 (12%)
Frame = +2
Query: 179 MVPKQLIVAVEGTAAIGPFWQTIVSDYLDKIIRCFCGNESLGQKPTTSQVELSLVMFNAH 358
M KQLIVAVEGTAA+GP+WQ+IVSDYL+KIIRCFC NE GQK + S VELSLV FN H
Sbjct: 1 MSEKQLIVAVEGTAAMGPYWQSIVSDYLEKIIRCFCVNELAGQKTSASNVELSLVTFNTH 60
Query: 359 GSYSACLVQRSGWTKDMDIFFQWLSAIPX--------------------------GNQNQ 460
GSY ACLVQRSGWTKD+DIF WLS IP G+QNQ
Sbjct: 61 GSYCACLVQRSGWTKDVDIFLHWLSTIPFAGGGFNDAAIAEGLSEALMMFSVAPNGSQNQ 120
Query: 461 -NVDGQRHCILVAASNPYPLPTPVYRPQPQNIEQSENIETQPDNRLSDAEALAKSFAQCA 637
NVDGQRHCILVAASNP+PLPTPVYRPQ QN++Q+EN E Q ++RLSDAE +AKSF QC+
Sbjct: 121 QNVDGQRHCILVAASNPHPLPTPVYRPQMQNLDQNENNEAQAESRLSDAETVAKSFVQCS 180
Query: 638 ISLSVICPKKLPKLRAIYNAGKRNPRAADPPVD 736
+SLSVICPK+LPKL AIYNA KRNPRAADPPVD
Sbjct: 181 VSLSVICPKQLPKLTAIYNAAKRNPRAADPPVD 213
>gb|KHG24986.1| Mediator of RNA polymerase II transcription subunit 25 [Gossypium
arboreum]
Length = 828
Score = 294 bits (752), Expect = 5e-91
Identities = 147/213 (69%), Positives = 165/213 (77%), Gaps = 27/213 (12%)
Frame = +2
Query: 179 MVPKQLIVAVEGTAAIGPFWQTIVSDYLDKIIRCFCGNESLGQKPTTSQVELSLVMFNAH 358
M KQLIVAVEGTAA+GP+WQ I+SDYL+KIIRCFC NE GQK TTS VELSLV FN H
Sbjct: 1 MAEKQLIVAVEGTAAMGPYWQIILSDYLEKIIRCFCSNEFAGQKNTTSNVELSLVAFNTH 60
Query: 359 GSYSACLVQRSGWTKDMDIFFQWLSAIPX--------------------------GNQNQ 460
GSY ACLVQRSGWTKD+DIF QWLSAIP GNQ
Sbjct: 61 GSYCACLVQRSGWTKDVDIFLQWLSAIPFSGGGFNDAAIAEGLSEALMMFPIAANGNQTH 120
Query: 461 NV-DGQRHCILVAASNPYPLPTPVYRPQPQNIEQSENIETQPDNRLSDAEALAKSFAQCA 637
+ DGQRHCILVAASNPYPLPTPVYRPQ QN+EQSEN+E+Q ++RLSDAE +AKSF QC+
Sbjct: 121 QIADGQRHCILVAASNPYPLPTPVYRPQTQNLEQSENMESQTESRLSDAETVAKSFPQCS 180
Query: 638 ISLSVICPKKLPKLRAIYNAGKRNPRAADPPVD 736
+SLSVICPK+L KL+AIY+AGKRNPRA+DPPVD
Sbjct: 181 VSLSVICPKQLSKLKAIYSAGKRNPRASDPPVD 213
>ref|XP_012478636.1| PREDICTED: mediator of RNA polymerase II transcription subunit 25
isoform X2 [Gossypium raimondii]
gi|763763083|gb|KJB30337.1| hypothetical protein
B456_005G138200 [Gossypium raimondii]
Length = 834
Score = 294 bits (752), Expect = 6e-91
Identities = 147/213 (69%), Positives = 165/213 (77%), Gaps = 27/213 (12%)
Frame = +2
Query: 179 MVPKQLIVAVEGTAAIGPFWQTIVSDYLDKIIRCFCGNESLGQKPTTSQVELSLVMFNAH 358
M KQLIVAVEGTAA+GP+WQ I+SDYL+KIIRCFC NE GQK TTS VELSLV FN H
Sbjct: 1 MAEKQLIVAVEGTAAMGPYWQIILSDYLEKIIRCFCSNEFAGQKNTTSNVELSLVTFNTH 60
Query: 359 GSYSACLVQRSGWTKDMDIFFQWLSAIPX--------------------------GNQNQ 460
GSY ACLVQRSGWTKD+DIF QWLSAIP GNQ
Sbjct: 61 GSYCACLVQRSGWTKDVDIFLQWLSAIPFSGGGFNDAAIAEGLSEALMMFPIAANGNQTH 120
Query: 461 NV-DGQRHCILVAASNPYPLPTPVYRPQPQNIEQSENIETQPDNRLSDAEALAKSFAQCA 637
+ DGQRHCILVAASNPYPLPTPVYRPQ QN+EQSEN+E+Q ++RLSDAE +AKSF QC+
Sbjct: 121 QIADGQRHCILVAASNPYPLPTPVYRPQTQNLEQSENMESQTESRLSDAETVAKSFPQCS 180
Query: 638 ISLSVICPKKLPKLRAIYNAGKRNPRAADPPVD 736
+SLSVICPK+L KL+AIY+AGKRNPRA+DPPVD
Sbjct: 181 VSLSVICPKQLSKLKAIYSAGKRNPRASDPPVD 213
>ref|XP_009771929.1| PREDICTED: mediator of RNA polymerase II transcription subunit
25-like [Nicotiana sylvestris]
Length = 828
Score = 293 bits (749), Expect = 2e-90
Identities = 144/209 (68%), Positives = 167/209 (79%), Gaps = 26/209 (12%)
Frame = +2
Query: 188 KQLIVAVEGTAAIGPFWQTIVSDYLDKIIRCFCGNESLGQKPTTSQVELSLVMFNAHGSY 367
KQLIVAVEGTAA+GPFW TIVSDYLDKIIR F G ES QKP+ + VE+SLVMFNAHGSY
Sbjct: 5 KQLIVAVEGTAALGPFWHTIVSDYLDKIIRSFFGAESTSQKPSAANVEVSLVMFNAHGSY 64
Query: 368 SACLVQRSGWTKDMDIFFQWLSAIPX-------------------------GNQNQ-NVD 469
SACLVQRSGWT+DMDIFFQWLSAIP GNQ+Q N++
Sbjct: 65 SACLVQRSGWTRDMDIFFQWLSAIPFSGGGFSDAAVAEGLGEALMMFSSPNGNQSQQNME 124
Query: 470 GQRHCILVAASNPYPLPTPVYRPQPQNIEQSENIETQPDNRLSDAEALAKSFAQCAISLS 649
G++HC+L++ASNPYPLPTPVYRPQ Q +EQ+EN ETQ D+RLSDAE +AK+F QC++SLS
Sbjct: 125 GKKHCLLISASNPYPLPTPVYRPQMQKLEQNENTETQTDSRLSDAETVAKAFPQCSVSLS 184
Query: 650 VICPKKLPKLRAIYNAGKRNPRAADPPVD 736
VICPK+L KLRA+YNAGKRNPRAADPP+D
Sbjct: 185 VICPKQLSKLRAVYNAGKRNPRAADPPID 213
>ref|XP_011021763.1| PREDICTED: mediator of RNA polymerase II transcription subunit
25-like [Populus euphratica]
Length = 857
Score = 292 bits (748), Expect = 4e-90
Identities = 144/213 (67%), Positives = 167/213 (78%), Gaps = 27/213 (12%)
Frame = +2
Query: 179 MVPKQLIVAVEGTAAIGPFWQTIVSDYLDKIIRCFCGNESLGQKPTTSQVELSLVMFNAH 358
M KQLIVAVEGTAA+GPFW IVSDYL+KIIRC+CGNE+ GQKP TS EL+LV FN+H
Sbjct: 1 MADKQLIVAVEGTAAMGPFWSIIVSDYLEKIIRCYCGNETSGQKPPTSSAELALVTFNSH 60
Query: 359 GSYSACLVQRSGWTKDMDIFFQWLSAIPX--------------------------GNQNQ 460
GSYSACLVQRSGWT+D+DIF WLSAIP GNQ Q
Sbjct: 61 GSYSACLVQRSGWTRDVDIFLHWLSAIPFAGGGFNDAAIAEGLSEALMMFPIAPNGNQTQ 120
Query: 461 -NVDGQRHCILVAASNPYPLPTPVYRPQPQNIEQSENIETQPDNRLSDAEALAKSFAQCA 637
N+DGQR+CIL+AASNP+PLPTPVYRPQ QN+EQ+ENI+ Q ++RLSDAE +AKSF QC+
Sbjct: 121 PNIDGQRNCILIAASNPHPLPTPVYRPQIQNLEQTENIDAQNESRLSDAETVAKSFPQCS 180
Query: 638 ISLSVICPKKLPKLRAIYNAGKRNPRAADPPVD 736
+SLSVICPK+LPKL++IYNAGKRN RAADPPVD
Sbjct: 181 VSLSVICPKQLPKLKSIYNAGKRNSRAADPPVD 213
>ref|XP_007046292.1| Phytochrome and flowering time regulatory protein isoform 2
[Theobroma cacao] gi|508710227|gb|EOY02124.1|
Phytochrome and flowering time regulatory protein
isoform 2 [Theobroma cacao]
Length = 860
Score = 292 bits (748), Expect = 4e-90
Identities = 147/213 (69%), Positives = 165/213 (77%), Gaps = 27/213 (12%)
Frame = +2
Query: 179 MVPKQLIVAVEGTAAIGPFWQTIVSDYLDKIIRCFCGNESLGQKPTTSQVELSLVMFNAH 358
M +QLIVAVEGTAA+GP+WQT+VSDYLDKIIRCF +E GQK +TS VEL+LV FN H
Sbjct: 1 MAERQLIVAVEGTAAMGPYWQTVVSDYLDKIIRCFSSSELTGQKTSTSNVELALVTFNTH 60
Query: 359 GSYSACLVQRSGWTKDMDIFFQWLSAIPX--------------------------GNQNQ 460
GSY ACLVQRSGWTKD+DIF QWLSAIP GNQ Q
Sbjct: 61 GSYCACLVQRSGWTKDVDIFLQWLSAIPFSGGGFNDAAIAEGLSEALMMFPIAPNGNQTQ 120
Query: 461 -NVDGQRHCILVAASNPYPLPTPVYRPQPQNIEQSENIETQPDNRLSDAEALAKSFAQCA 637
NVDGQRHCILVAASNPYPLPTPVYRPQ QN+EQ+ENIE Q ++RLSDAE +AKSFAQC+
Sbjct: 121 QNVDGQRHCILVAASNPYPLPTPVYRPQIQNLEQTENIEAQTESRLSDAETVAKSFAQCS 180
Query: 638 ISLSVICPKKLPKLRAIYNAGKRNPRAADPPVD 736
+SLSVICPK+L KL+ IY+AGKRNPRA DPPVD
Sbjct: 181 VSLSVICPKQLSKLKTIYSAGKRNPRAPDPPVD 213
>gb|KJB80075.1| hypothetical protein B456_013G080300 [Gossypium raimondii]
Length = 683
Score = 288 bits (737), Expect = 5e-90
Identities = 146/213 (68%), Positives = 162/213 (76%), Gaps = 27/213 (12%)
Frame = +2
Query: 179 MVPKQLIVAVEGTAAIGPFWQTIVSDYLDKIIRCFCGNESLGQKPTTSQVELSLVMFNAH 358
M KQLIVAVEGTAA+GP+W +VSDYLDKIIRCFC +E GQK +TS VE SLV FN H
Sbjct: 1 MAEKQLIVAVEGTAAMGPYWHIVVSDYLDKIIRCFCSSELTGQKNSTSNVEFSLVTFNTH 60
Query: 359 GSYSACLVQRSGWTKDMDIFFQWLSAIPX--------------------------GNQN- 457
GSY ACLVQRSGWTKD+DIF QWLSAIP GNQ
Sbjct: 61 GSYCACLVQRSGWTKDVDIFLQWLSAIPFSGGGFNDAAIAEGLSEALMMFPIASNGNQTP 120
Query: 458 QNVDGQRHCILVAASNPYPLPTPVYRPQPQNIEQSENIETQPDNRLSDAEALAKSFAQCA 637
QNVDGQRHCILVAASNPYPLPTPVYRPQ QN+EQ EN E Q ++ LSDAE +A+SFAQC+
Sbjct: 121 QNVDGQRHCILVAASNPYPLPTPVYRPQIQNLEQVENSEAQTESCLSDAETVARSFAQCS 180
Query: 638 ISLSVICPKKLPKLRAIYNAGKRNPRAADPPVD 736
+SLSVICPK+L KL+AIY+AGKRNPRAADPPVD
Sbjct: 181 VSLSVICPKQLAKLKAIYSAGKRNPRAADPPVD 213
>ref|XP_007046291.1| Phytochrome and flowering time regulatory protein isoform 1
[Theobroma cacao] gi|508710226|gb|EOY02123.1|
Phytochrome and flowering time regulatory protein
isoform 1 [Theobroma cacao]
Length = 871
Score = 292 bits (748), Expect = 5e-90
Identities = 147/213 (69%), Positives = 165/213 (77%), Gaps = 27/213 (12%)
Frame = +2
Query: 179 MVPKQLIVAVEGTAAIGPFWQTIVSDYLDKIIRCFCGNESLGQKPTTSQVELSLVMFNAH 358
M +QLIVAVEGTAA+GP+WQT+VSDYLDKIIRCF +E GQK +TS VEL+LV FN H
Sbjct: 1 MAERQLIVAVEGTAAMGPYWQTVVSDYLDKIIRCFSSSELTGQKTSTSNVELALVTFNTH 60
Query: 359 GSYSACLVQRSGWTKDMDIFFQWLSAIPX--------------------------GNQNQ 460
GSY ACLVQRSGWTKD+DIF QWLSAIP GNQ Q
Sbjct: 61 GSYCACLVQRSGWTKDVDIFLQWLSAIPFSGGGFNDAAIAEGLSEALMMFPIAPNGNQTQ 120
Query: 461 -NVDGQRHCILVAASNPYPLPTPVYRPQPQNIEQSENIETQPDNRLSDAEALAKSFAQCA 637
NVDGQRHCILVAASNPYPLPTPVYRPQ QN+EQ+ENIE Q ++RLSDAE +AKSFAQC+
Sbjct: 121 QNVDGQRHCILVAASNPYPLPTPVYRPQIQNLEQTENIEAQTESRLSDAETVAKSFAQCS 180
Query: 638 ISLSVICPKKLPKLRAIYNAGKRNPRAADPPVD 736
+SLSVICPK+L KL+ IY+AGKRNPRA DPPVD
Sbjct: 181 VSLSVICPKQLSKLKTIYSAGKRNPRAPDPPVD 213
>ref|XP_002311445.2| hypothetical protein POPTR_0008s11650g [Populus trichocarpa]
gi|550332870|gb|EEE88812.2| hypothetical protein
POPTR_0008s11650g [Populus trichocarpa]
Length = 896
Score = 293 bits (749), Expect = 5e-90
Identities = 146/213 (68%), Positives = 165/213 (77%), Gaps = 27/213 (12%)
Frame = +2
Query: 179 MVPKQLIVAVEGTAAIGPFWQTIVSDYLDKIIRCFCGNESLGQKPTTSQVELSLVMFNAH 358
M KQLIVAVEGTAA+GPFW IVSDYL+KIIRC+CGNE+ GQKP TS ELSLV FN+H
Sbjct: 1 MADKQLIVAVEGTAAMGPFWSIIVSDYLEKIIRCYCGNETSGQKPPTSSAELSLVTFNSH 60
Query: 359 GSYSACLVQRSGWTKDMDIFFQWLSAIPX--------------------------GNQNQ 460
GSYSACLVQRSGWT+D+DIF WLSAIP GNQ Q
Sbjct: 61 GSYSACLVQRSGWTRDVDIFLHWLSAIPFAGGGFNDAAIAEGLSEALMMFPITPNGNQTQ 120
Query: 461 -NVDGQRHCILVAASNPYPLPTPVYRPQPQNIEQSENIETQPDNRLSDAEALAKSFAQCA 637
N DGQR+CIL+AASNP+PLPTPVYRPQ QN+EQ+ENI+ Q ++RLSDAE +AKSF QC+
Sbjct: 121 PNTDGQRNCILIAASNPHPLPTPVYRPQIQNLEQTENIDAQNESRLSDAETVAKSFPQCS 180
Query: 638 ISLSVICPKKLPKLRAIYNAGKRNPRAADPPVD 736
+SLSVICPK+LPKLR IYNAGKRN RAADPPVD
Sbjct: 181 VSLSVICPKQLPKLRLIYNAGKRNSRAADPPVD 213