BLASTX nr result
ID: Rehmannia28_contig00014613
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia28_contig00014613
(513 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011080993.1| PREDICTED: uncharacterized protein LOC105164... 186 4e-52
ref|XP_012846533.1| PREDICTED: uncharacterized protein LOC105966... 95 1e-19
emb|CDP09774.1| unnamed protein product [Coffea canephora] 90 5e-18
ref|XP_004244605.1| PREDICTED: uncharacterized protein LOC101250... 80 2e-14
ref|XP_009350651.1| PREDICTED: uncharacterized protein LOC103942... 76 3e-13
ref|XP_009369041.1| PREDICTED: uncharacterized protein LOC103958... 76 3e-13
ref|XP_009350650.1| PREDICTED: uncharacterized protein LOC103942... 76 3e-13
ref|XP_009369040.1| PREDICTED: uncharacterized protein LOC103958... 76 3e-13
ref|XP_009785549.1| PREDICTED: uncharacterized protein LOC104233... 76 5e-13
ref|XP_015085074.1| PREDICTED: uncharacterized protein LOC107028... 74 2e-12
ref|XP_009628872.1| PREDICTED: uncharacterized protein LOC104119... 73 4e-12
ref|XP_015085075.1| PREDICTED: uncharacterized protein LOC107028... 73 6e-12
ref|XP_006352282.1| PREDICTED: uncharacterized protein LOC102596... 71 3e-11
ref|XP_002892714.1| S1 RNA-binding domain-containing protein [Ar... 70 6e-11
ref|XP_008374046.1| PREDICTED: uncharacterized protein LOC103437... 67 4e-10
ref|XP_008374045.1| PREDICTED: uncharacterized protein LOC103437... 67 4e-10
ref|NP_172740.1| Nucleic acid-binding, OB-fold-like protein [Ara... 65 2e-09
gb|AAF78485.1|AC012187_5 Contains similarity to S1 protein from ... 65 2e-09
gb|KJB52066.1| hypothetical protein B456_008G245200 [Gossypium r... 65 2e-09
ref|XP_006417193.1| hypothetical protein EUTSA_v10006889mg [Eutr... 65 2e-09
>ref|XP_011080993.1| PREDICTED: uncharacterized protein LOC105164119 [Sesamum indicum]
Length = 774
Score = 186 bits (472), Expect = 4e-52
Identities = 102/185 (55%), Positives = 127/185 (68%), Gaps = 16/185 (8%)
Frame = +1
Query: 7 NGKSSRFGMKPNLTLKMGKEPQKERFSDITLLKKPEPMTIST---EENSQSE-----IGD 162
+GKSSRF MKPNL+L+MGK PQ ERFSDITLLKKPEPMT+S EEN+ S+ IGD
Sbjct: 189 DGKSSRFSMKPNLSLQMGKNPQ-ERFSDITLLKKPEPMTVSPKSGEENAHSDSKDGNIGD 247
Query: 163 KDLKY--------DAVTLSEKPEMMNHNFSREGEQESKNELTESNFNNIVNEDNFDISSS 318
K L+Y DA L +KPE+M NF+++ EQES E + + NI N+ N IS+S
Sbjct: 248 KSLEYGTVSAGRSDAAALRQKPELMQLNFNKKAEQESSEEYIDPSSGNIANDSNLTISNS 307
Query: 319 DNQLVTASSSNVNQFQEAGQKDYGLDKGSATELQADMWSAEKTFTSDGSSRNTNTISMDT 498
DNQ+ T++ N NQF E G++KGSATELQADMWS KTF SDG +T+ +SMD+
Sbjct: 308 DNQVATSTDGNDNQFLETSVTGSGIEKGSATELQADMWSGRKTFASDGPPGSTSAMSMDS 367
Query: 499 VLIGK 513
VLI K
Sbjct: 368 VLIEK 372
>ref|XP_012846533.1| PREDICTED: uncharacterized protein LOC105966520 [Erythranthe
guttata] gi|604318035|gb|EYU29735.1| hypothetical
protein MIMGU_mgv1a001614mg [Erythranthe guttata]
Length = 785
Score = 94.7 bits (234), Expect = 1e-19
Identities = 72/176 (40%), Positives = 92/176 (52%), Gaps = 7/176 (3%)
Frame = +1
Query: 7 NGKSSRFGMKPNLTLKMGKEPQKERFSDITLLKKPEPMTISTEE-------NSQSEIGDK 165
N K S FGMKPNLTLKMGK +ERFSD+TLLKKPEP T+S E N + GDK
Sbjct: 249 NSKYSMFGMKPNLTLKMGKVANRERFSDMTLLKKPEPRTVSEEPIDGKDVINDEVGGGDK 308
Query: 166 DLKYDAVTLSEKPEMMNHNFSREGEQESKNELTESNFNNIVNEDNFDISSSDNQLVTASS 345
L+ + TL +KPE+ + E K ELT+ + + SSSD ++S
Sbjct: 309 SLE-NGATLLQKPELTK-------KLEGKEELTK--------KPTVESSSSD----ISTS 348
Query: 346 SNVNQFQEAGQKDYGLDKGSATELQADMWSAEKTFTSDGSSRNTNTISMDTVLIGK 513
N++Q ++AG+ +Y GS ELQA M S DTVLIGK
Sbjct: 349 GNLDQSKDAGENEY----GSGIELQAPM------------------SSKDTVLIGK 382
>emb|CDP09774.1| unnamed protein product [Coffea canephora]
Length = 777
Score = 90.1 bits (222), Expect = 5e-18
Identities = 69/188 (36%), Positives = 101/188 (53%), Gaps = 21/188 (11%)
Frame = +1
Query: 13 KSSRFGMKPNLTLKMGKEPQKERFSDITLLKKPEPMTISTE---ENSQS---------EI 156
KSSR ++PNL+L+MGKEPQKERFSDITLLKKPEP+ + + EN S E
Sbjct: 195 KSSRLSIRPNLSLRMGKEPQKERFSDITLLKKPEPLKMVPDLEGENGHSGGSKAEDGRET 254
Query: 157 GDKDLKYDAVTLSEKPEMMNHNF-SREGEQESKNELTESNFNNIVNEDNFDISSSDNQLV 333
G+ +L L PE + NF S ++ S SN N + + N + ++S ++
Sbjct: 255 GNSNLD---PALLRMPEQLETNFISDRADESSGGYANRSNDVNSITDGNLNNTNSYAEI- 310
Query: 334 TASSSNVNQFQEAGQKDYGLDKGSATELQ-ADMWSAEKTFTSDGSSRNTNTI-------S 489
A+ N+NQ E+ + + SAT LQ +D+WS+ K +SD S + + S
Sbjct: 311 -AAKGNLNQALESRVTNSFEENESATGLQPSDLWSSGK--SSDSSEPSATKLAESDPGFS 367
Query: 490 MDTVLIGK 513
+D L+GK
Sbjct: 368 LDASLLGK 375
>ref|XP_004244605.1| PREDICTED: uncharacterized protein LOC101250822 [Solanum
lycopersicum]
Length = 883
Score = 79.7 bits (195), Expect = 2e-14
Identities = 64/215 (29%), Positives = 103/215 (47%), Gaps = 48/215 (22%)
Frame = +1
Query: 13 KSSRFGMKPNLTLKMGKEPQKERFSDITLLKKPEPMTISTEENSQSEIGDKDLKYDAVTL 192
+SS+F +KPNLTLKMG+E + E+FSD+TLLKKPEPM IS++++ ++ G K TL
Sbjct: 269 ESSKFKIKPNLTLKMGRELKPEKFSDVTLLKKPEPMRISSDDSEKN--GQSSDKSSDATL 326
Query: 193 SEKPEMM---NHNFSREGE------------------------QESKNEL-----TESNF 276
+KPE M + + + G+ E KN L SN
Sbjct: 327 LKKPEPMRISSDDSEKNGQSSDVLPVSSDDSEDASLTEVYASSSEPKNSLLLNKPEPSNL 386
Query: 277 N---------------NIVNEDNFDISSSDNQLVTASSSNVNQFQEAGQKDYGLDKGSAT 411
N +I +E FD ++S ++L++ + S + Q ++ + + +G T
Sbjct: 387 NLKIDPNKESSEVQHPSISDESTFDAANSSSELISMAESKLRQPLQSNRSNPLEKQGFGT 446
Query: 412 EL-QADMWSAEKTFTSDGSSRNTNTISMDTVLIGK 513
Q D AE++ S+ + S+D L+GK
Sbjct: 447 GFQQTDTQPAERSSDSNTPAETGPMESLDAALLGK 481
>ref|XP_009350651.1| PREDICTED: uncharacterized protein LOC103942167 isoform X2 [Pyrus x
bretschneideri]
Length = 693
Score = 76.3 bits (186), Expect = 3e-13
Identities = 63/190 (33%), Positives = 98/190 (51%), Gaps = 25/190 (13%)
Frame = +1
Query: 19 SRFGMKPNLTLKMGKEPQKERFSDITLLKKPEPMTI-STEENSQSE--------IGDKDL 171
SR +KPNL+LKM E KE+FSD+TLL+KP+P+++ + EN Q + IGD ++
Sbjct: 203 SRLQIKPNLSLKMRIEQPKEKFSDMTLLRKPQPVSVDESSENKQEQSSDADKNVIGDAEM 262
Query: 172 --------KYDAVTLSEKPEMMNHNFSREGEQESKNELTESNFNNIVNEDNFDISSSDNQ 327
K TL EKP+ + + E NE +E+ + IV+ + SS D
Sbjct: 263 EKWREENDKVSGFTLLEKPKAT----GVKPKSEDDNEQSENGESGIVDTFEDNDSSKDLS 318
Query: 328 LVTASSSNVNQFQEA----GQKD---YGLDKGSATELQADMWSAEKTFTSDGSSRNTNT- 483
TA+S+ N +E+ GQKD GL + +++ ++ + SD S +N
Sbjct: 319 EFTATSTTRNSLEESKDGPGQKDDTLIGLQPYEQSTMESSEEVSDSSELSDTSLPVSNVD 378
Query: 484 ISMDTVLIGK 513
++MDT L GK
Sbjct: 379 LTMDTALQGK 388
>ref|XP_009369041.1| PREDICTED: uncharacterized protein LOC103958500 isoform X2 [Pyrus x
bretschneideri]
Length = 693
Score = 76.3 bits (186), Expect = 3e-13
Identities = 63/190 (33%), Positives = 98/190 (51%), Gaps = 25/190 (13%)
Frame = +1
Query: 19 SRFGMKPNLTLKMGKEPQKERFSDITLLKKPEPMTI-STEENSQSE--------IGDKDL 171
SR +KPNL+LKM E KE+FSD+TLL+KP+P+++ + EN Q + IGD ++
Sbjct: 203 SRLQIKPNLSLKMRIEQPKEKFSDMTLLRKPQPVSVDESSENKQEQSSDADKNVIGDAEM 262
Query: 172 --------KYDAVTLSEKPEMMNHNFSREGEQESKNELTESNFNNIVNEDNFDISSSDNQ 327
K TL EKP+ + + E NE +E+ + IV+ + SS D
Sbjct: 263 EKWREANDKVSGFTLLEKPKAT----GVKPKSEDDNEQSENGESGIVDTFEDNDSSKDLS 318
Query: 328 LVTASSSNVNQFQEA----GQKD---YGLDKGSATELQADMWSAEKTFTSDGSSRNTNT- 483
TA+S+ N +E+ GQKD GL + +++ ++ + SD S +N
Sbjct: 319 EFTATSTTRNSLEESKDGPGQKDDTLIGLQPYEQSTMESSEEVSDSSELSDTSLPVSNVD 378
Query: 484 ISMDTVLIGK 513
++MDT L GK
Sbjct: 379 LTMDTALQGK 388
>ref|XP_009350650.1| PREDICTED: uncharacterized protein LOC103942167 isoform X1 [Pyrus x
bretschneideri]
Length = 775
Score = 76.3 bits (186), Expect = 3e-13
Identities = 63/190 (33%), Positives = 98/190 (51%), Gaps = 25/190 (13%)
Frame = +1
Query: 19 SRFGMKPNLTLKMGKEPQKERFSDITLLKKPEPMTI-STEENSQSE--------IGDKDL 171
SR +KPNL+LKM E KE+FSD+TLL+KP+P+++ + EN Q + IGD ++
Sbjct: 203 SRLQIKPNLSLKMRIEQPKEKFSDMTLLRKPQPVSVDESSENKQEQSSDADKNVIGDAEM 262
Query: 172 --------KYDAVTLSEKPEMMNHNFSREGEQESKNELTESNFNNIVNEDNFDISSSDNQ 327
K TL EKP+ + + E NE +E+ + IV+ + SS D
Sbjct: 263 EKWREENDKVSGFTLLEKPKAT----GVKPKSEDDNEQSENGESGIVDTFEDNDSSKDLS 318
Query: 328 LVTASSSNVNQFQEA----GQKD---YGLDKGSATELQADMWSAEKTFTSDGSSRNTNT- 483
TA+S+ N +E+ GQKD GL + +++ ++ + SD S +N
Sbjct: 319 EFTATSTTRNSLEESKDGPGQKDDTLIGLQPYEQSTMESSEEVSDSSELSDTSLPVSNVD 378
Query: 484 ISMDTVLIGK 513
++MDT L GK
Sbjct: 379 LTMDTALQGK 388
>ref|XP_009369040.1| PREDICTED: uncharacterized protein LOC103958500 isoform X1 [Pyrus x
bretschneideri]
Length = 775
Score = 76.3 bits (186), Expect = 3e-13
Identities = 63/190 (33%), Positives = 98/190 (51%), Gaps = 25/190 (13%)
Frame = +1
Query: 19 SRFGMKPNLTLKMGKEPQKERFSDITLLKKPEPMTI-STEENSQSE--------IGDKDL 171
SR +KPNL+LKM E KE+FSD+TLL+KP+P+++ + EN Q + IGD ++
Sbjct: 203 SRLQIKPNLSLKMRIEQPKEKFSDMTLLRKPQPVSVDESSENKQEQSSDADKNVIGDAEM 262
Query: 172 --------KYDAVTLSEKPEMMNHNFSREGEQESKNELTESNFNNIVNEDNFDISSSDNQ 327
K TL EKP+ + + E NE +E+ + IV+ + SS D
Sbjct: 263 EKWREANDKVSGFTLLEKPKAT----GVKPKSEDDNEQSENGESGIVDTFEDNDSSKDLS 318
Query: 328 LVTASSSNVNQFQEA----GQKD---YGLDKGSATELQADMWSAEKTFTSDGSSRNTNT- 483
TA+S+ N +E+ GQKD GL + +++ ++ + SD S +N
Sbjct: 319 EFTATSTTRNSLEESKDGPGQKDDTLIGLQPYEQSTMESSEEVSDSSELSDTSLPVSNVD 378
Query: 484 ISMDTVLIGK 513
++MDT L GK
Sbjct: 379 LTMDTALQGK 388
>ref|XP_009785549.1| PREDICTED: uncharacterized protein LOC104233798 [Nicotiana
sylvestris]
Length = 889
Score = 75.9 bits (185), Expect = 5e-13
Identities = 59/214 (27%), Positives = 97/214 (45%), Gaps = 47/214 (21%)
Frame = +1
Query: 13 KSSRFGMKPNLTLKMGKEPQKERFSDITLLKKPEPMTISTEENSQSEIGDKDLKYDAVTL 192
+SS F ++PNLTLKMGKE + E+FSD+TLLKKPEPM I+++ + + G K+ TL
Sbjct: 280 ESSNFKIRPNLTLKMGKERKPEKFSDVTLLKKPEPMRINSDSSENN--GQSSDKFSDATL 337
Query: 193 SEKPEMMNHNFSREGE--------------------------QESKNEL----------- 261
+KPE M+ N + ESKN L
Sbjct: 338 LKKPEPMSINSDNSEDNGQSSDILPVASNDTADSSLKVYASTNESKNSLLLNKPEVSNLN 397
Query: 262 ---------TESNFNNIVNEDNFDISSSDNQLVTASSSNVNQFQEAGQKDYGLDKGSAT- 411
+E +++E+ + ++ ++ + + + ++Q ++ ++GS T
Sbjct: 398 LKIDQNQGSSEDQRTGVLDENTLNAANVSSEHTSVAENKLDQPLQSSISKPLDEQGSETG 457
Query: 412 ELQADMWSAEKTFTSDGSSRNTNTISMDTVLIGK 513
Q D W AE++ S N S+D L+GK
Sbjct: 458 SQQTDTWPAERS-----SDSNKPMESLDAALLGK 486
>ref|XP_015085074.1| PREDICTED: uncharacterized protein LOC107028503 isoform X1 [Solanum
pennellii]
Length = 941
Score = 74.3 bits (181), Expect = 2e-12
Identities = 46/108 (42%), Positives = 66/108 (61%), Gaps = 3/108 (2%)
Frame = +1
Query: 13 KSSRFGMKPNLTLKMGKEPQKERFSDITLLKKPEPMTIS---TEENSQSEIGDKDLKYDA 183
+SS+F +KPNLTLKMG+E + E+FSD+TLLKKPEPM IS +E+N QS D
Sbjct: 269 ESSKFKIKPNLTLKMGRELKPEKFSDVTLLKKPEPMRISSDDSEKNGQSSDNSSD----- 323
Query: 184 VTLSEKPEMMNHNFSREGEQESKNELTESNFNNIVNEDNFDISSSDNQ 327
TL +KPE M + S + E+ ++ S+ + + ISS D++
Sbjct: 324 ATLLKKPEPMRIS-SDDSEKNGQSSDKSSDATLLKKPEPMRISSDDSE 370
>ref|XP_009628872.1| PREDICTED: uncharacterized protein LOC104119148 [Nicotiana
tomentosiformis]
Length = 900
Score = 73.2 bits (178), Expect = 4e-12
Identities = 44/116 (37%), Positives = 66/116 (56%), Gaps = 3/116 (2%)
Frame = +1
Query: 13 KSSRFGMKPNLTLKMGKEPQKERFSDITLLKKPEPM---TISTEENSQSEIGDKDLKYDA 183
+SS F ++PNLTLKM KEP+ E+FSD+TLLKKPEPM ++S+E N QS K+
Sbjct: 311 ESSNFKIRPNLTLKMSKEPKSEKFSDVTLLKKPEPMRINSVSSENNGQSSD-----KFSD 365
Query: 184 VTLSEKPEMMNHNFSREGEQESKNELTESNFNNIVNEDNFDISSSDNQLVTASSSN 351
L +KPE M + + + +++ S+ + ++D D S + T S N
Sbjct: 366 AALLKKPEPMTMSINSDNSEKNGQ---SSDILPVASDDTTDSSLTAVYASTNESKN 418
>ref|XP_015085075.1| PREDICTED: uncharacterized protein LOC107028503 isoform X2 [Solanum
pennellii]
Length = 912
Score = 72.8 bits (177), Expect = 6e-12
Identities = 45/127 (35%), Positives = 72/127 (56%)
Frame = +1
Query: 13 KSSRFGMKPNLTLKMGKEPQKERFSDITLLKKPEPMTISTEENSQSEIGDKDLKYDAVTL 192
+SS+F +KPNLTLKMG+E + E+FSD+TLLKKPEPM IS++++ ++ G K TL
Sbjct: 269 ESSKFKIKPNLTLKMGRELKPEKFSDVTLLKKPEPMRISSDDSEKN--GQSSDKSSDATL 326
Query: 193 SEKPEMMNHNFSREGEQESKNELTESNFNNIVNEDNFDISSSDNQLVTASSSNVNQFQEA 372
+KPE M S + +++ +S+ ++ + ++S N SS+V
Sbjct: 327 LKKPEPM--RISSDDSEKNGQSSDKSSDATLLKKPEPMRTNSGNSEKNGQSSDVLPVSSD 384
Query: 373 GQKDYGL 393
+D L
Sbjct: 385 DSEDASL 391
>ref|XP_006352282.1| PREDICTED: uncharacterized protein LOC102596782 [Solanum tuberosum]
Length = 912
Score = 70.9 bits (172), Expect = 3e-11
Identities = 44/119 (36%), Positives = 69/119 (57%), Gaps = 6/119 (5%)
Frame = +1
Query: 13 KSSRFGMKPNLTLKMGKEPQKERFSDITLLKKPEPMTISTEENSQSEIGDKDLKYDAVTL 192
+SS+F +KPNLTLKMGKE + E+FSD+TLLKKPEPM IS++++ ++ G K TL
Sbjct: 269 ESSKFKIKPNLTLKMGKELKPEKFSDVTLLKKPEPMRISSDDSEKN--GQSSDKPSDATL 326
Query: 193 SEKPEMM---NHNFSREGEQESKNE---LTESNFNNIVNEDNFDISSSDNQLVTASSSN 351
+K E M + N + G+ K+ L + +N N + + + ++ SS +
Sbjct: 327 LKKLEPMRISSDNSEKNGQSSDKSSDATLLKKPEPMRINSGNSEKNGQSSDVLPVSSDD 385
>ref|XP_002892714.1| S1 RNA-binding domain-containing protein [Arabidopsis lyrata subsp.
lyrata] gi|297338556|gb|EFH68973.1| S1 RNA-binding
domain-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 768
Score = 69.7 bits (169), Expect = 6e-11
Identities = 50/153 (32%), Positives = 75/153 (49%), Gaps = 19/153 (12%)
Frame = +1
Query: 13 KSSRFGMKPNLTLKMGKEPQKERFSDITLLKKPEPMTI-STEENSQSEI----------G 159
+ S+ +KPNLTLKM E + ERFSD+TLLKKPEP+++ + EE+S+ ++ G
Sbjct: 188 EESKLRLKPNLTLKMRNERENERFSDMTLLKKPEPVSVDAAEESSEDKVIPDGLTMEEGG 247
Query: 160 DKDLKYDAVTLSEKPEMMN--HNFSREGEQESKNELTESNFNNI------VNEDNFDISS 315
+D+ Y TL EKPE + N E E +E N+I +N D +
Sbjct: 248 QEDVTYSEYTLLEKPEARSKPENIKEEVGDSRAVESSEIENNSIQKPEARPEPENVDNNV 307
Query: 316 SDNQLVTASSSNVNQFQEAGQKDYGLDKGSATE 414
D+ + +S N Q + GS+ E
Sbjct: 308 GDSGAMESSEIENNSIPTEMQLNCERSSGSSEE 340
>ref|XP_008374046.1| PREDICTED: uncharacterized protein LOC103437355 isoform X2 [Malus
domestica]
Length = 775
Score = 67.4 bits (163), Expect = 4e-10
Identities = 58/190 (30%), Positives = 92/190 (48%), Gaps = 25/190 (13%)
Frame = +1
Query: 19 SRFGMKPNLTLKMGKEPQKERFSDITLLKKPEPMTISTEENSQSE---------IGDKDL 171
SR +KPNL+LKM E KE+FSD+TLL+KP+P+++ ++ E IGD ++
Sbjct: 203 SRLQIKPNLSLKMRIEQPKEKFSDMTLLRKPQPVSVDESSENKQEXSSDVDENVIGDAEM 262
Query: 172 --------KYDAVTLSEKPEMMNHNFSREGEQESKNELTESNFNNIVNEDNFDISSSDNQ 327
K TL EKP + + NE +E+ ++IV+ + SS D
Sbjct: 263 EKWREENDKVSGFTLLEKPXAT----GVKTKSXDDNEQSENGESSIVDTVEDNDSSKDLS 318
Query: 328 LVTASSSNVNQFQEA----GQKD---YGLDKGSATELQADMWSAEKTFTSDGSSRNTNT- 483
TA+S+ N +E+ GQKD GL +++ ++ + SD +N
Sbjct: 319 EFTAASTTRNSLEESKDGPGQKDDTLIGLQPYEQXTVESSEELSDSSELSDKXLPVSNVD 378
Query: 484 ISMDTVLIGK 513
+ +DT L GK
Sbjct: 379 LMIDTALQGK 388
>ref|XP_008374045.1| PREDICTED: uncharacterized protein LOC103437355 isoform X1 [Malus
domestica]
Length = 778
Score = 67.4 bits (163), Expect = 4e-10
Identities = 58/190 (30%), Positives = 92/190 (48%), Gaps = 25/190 (13%)
Frame = +1
Query: 19 SRFGMKPNLTLKMGKEPQKERFSDITLLKKPEPMTISTEENSQSE---------IGDKDL 171
SR +KPNL+LKM E KE+FSD+TLL+KP+P+++ ++ E IGD ++
Sbjct: 203 SRLQIKPNLSLKMRIEQPKEKFSDMTLLRKPQPVSVDESSENKQEXSSDVDENVIGDAEM 262
Query: 172 --------KYDAVTLSEKPEMMNHNFSREGEQESKNELTESNFNNIVNEDNFDISSSDNQ 327
K TL EKP + + NE +E+ ++IV+ + SS D
Sbjct: 263 EKWREENDKVSGFTLLEKPXAT----GVKTKSXDDNEQSENGESSIVDTVEDNDSSKDLS 318
Query: 328 LVTASSSNVNQFQEA----GQKD---YGLDKGSATELQADMWSAEKTFTSDGSSRNTNT- 483
TA+S+ N +E+ GQKD GL +++ ++ + SD +N
Sbjct: 319 EFTAASTTRNSLEESKDGPGQKDDTLIGLQPYEQXTVESSEELSDSSELSDKXLPVSNVD 378
Query: 484 ISMDTVLIGK 513
+ +DT L GK
Sbjct: 379 LMIDTALQGK 388
>ref|NP_172740.1| Nucleic acid-binding, OB-fold-like protein [Arabidopsis thaliana]
gi|15028377|gb|AAK76665.1| putative heat shock factor
protein hsf8 [Arabidopsis thaliana]
gi|25055005|gb|AAN71967.1| putative heat shock factor
protein hsf8 [Arabidopsis thaliana]
gi|225897916|dbj|BAH30290.1| hypothetical protein
[Arabidopsis thaliana] gi|332190809|gb|AEE28930.1|
Nucleic acid-binding, OB-fold-like protein [Arabidopsis
thaliana]
Length = 767
Score = 65.5 bits (158), Expect = 2e-09
Identities = 50/169 (29%), Positives = 77/169 (45%), Gaps = 16/169 (9%)
Frame = +1
Query: 13 KSSRFGMKPNLTLKMGKEPQKERFSDITLLKKPEPMTISTEENSQSEIGDKDLK------ 174
+ S+ +KPNLTLKM E + ERFSD+TLL+KPEP+++ EE + D ++
Sbjct: 193 EESKLRLKPNLTLKMRNERENERFSDMTLLRKPEPVSVVAEEEDKPLSDDLTMEEGEQEG 252
Query: 175 --YDAVTLSEKPEMMNHNFSREGEQESKNELTESNF-NNIVNE-------DNFDISSSDN 324
Y TL EKPE + E E + S NN + + +N + +D+
Sbjct: 253 GTYSQYTLLEKPEARLQPVNVEEEVGDSGGVESSEIVNNSIQKPEARPELENIEKEVADS 312
Query: 325 QLVTASSSNVNQFQEAGQKDYGLDKGSATELQADMWSAEKTFTSDGSSR 471
++ +S N + +L ++M S EKT SD R
Sbjct: 313 GVLESSEIENNSIP------------TEMQLNSEMSSEEKTINSDPLER 349
>gb|AAF78485.1|AC012187_5 Contains similarity to S1 protein from Homo sapiens gb|U27517 and
contains a S1 RNA binding PF|00575 domain. EST
gb|F15427, gb|F15428 comes from this gene [Arabidopsis
thaliana]
Length = 775
Score = 65.5 bits (158), Expect = 2e-09
Identities = 50/169 (29%), Positives = 77/169 (45%), Gaps = 16/169 (9%)
Frame = +1
Query: 13 KSSRFGMKPNLTLKMGKEPQKERFSDITLLKKPEPMTISTEENSQSEIGDKDLK------ 174
+ S+ +KPNLTLKM E + ERFSD+TLL+KPEP+++ EE + D ++
Sbjct: 193 EESKLRLKPNLTLKMRNERENERFSDMTLLRKPEPVSVVAEEEDKPLSDDLTMEEGEQEG 252
Query: 175 --YDAVTLSEKPEMMNHNFSREGEQESKNELTESNF-NNIVNE-------DNFDISSSDN 324
Y TL EKPE + E E + S NN + + +N + +D+
Sbjct: 253 GTYSQYTLLEKPEARLQPVNVEEEVGDSGGVESSEIVNNSIQKPEARPELENIEKEVADS 312
Query: 325 QLVTASSSNVNQFQEAGQKDYGLDKGSATELQADMWSAEKTFTSDGSSR 471
++ +S N + +L ++M S EKT SD R
Sbjct: 313 GVLESSEIENNSIP------------TEMQLNSEMSSEEKTINSDPLER 349
>gb|KJB52066.1| hypothetical protein B456_008G245200 [Gossypium raimondii]
Length = 681
Score = 65.1 bits (157), Expect = 2e-09
Identities = 54/177 (30%), Positives = 93/177 (52%), Gaps = 10/177 (5%)
Frame = +1
Query: 13 KSSRFGMKPNLTLKMGKEPQKERFSDITLLKKPEPMTIST----EENSQSEIG---DKDL 171
+ SRF MK NL+L+M E KE+F+D+TLL+KPEPM++ T +++S +G +K++
Sbjct: 119 RPSRFRMKSNLSLRMRNEKAKEQFTDMTLLRKPEPMSVDTSIDEKQDSDDIVGVEKEKEV 178
Query: 172 KYDAV---TLSEKPEMMNHNFSREGEQESKNELTESNFNNIVNEDNFDISSSDNQLVTAS 342
+ D + TL +KPE ++ ++ GE+ + E E V + F+ + L +A+
Sbjct: 179 E-DGIGDFTLLKKPEQLSVT-TKIGEEVEQFEDLE------VEAERFEAEIEAHMLASAT 230
Query: 343 SSNVNQFQEAGQKDYGLDKGSATELQADMWSAEKTFTSDGSSRNTNTISMDTVLIGK 513
S+V + EAG M SAE++ + + ++SM+ L GK
Sbjct: 231 KSSVEEASEAGHGLIPKKPEIEDHSLIGMQSAERS-NRVSTEESGISLSMEAALQGK 286
>ref|XP_006417193.1| hypothetical protein EUTSA_v10006889mg [Eutrema salsugineum]
gi|557094964|gb|ESQ35546.1| hypothetical protein
EUTSA_v10006889mg [Eutrema salsugineum]
Length = 746
Score = 65.1 bits (157), Expect = 2e-09
Identities = 49/131 (37%), Positives = 67/131 (51%), Gaps = 15/131 (11%)
Frame = +1
Query: 13 KSSRFGMKPNLTLKMGKEPQKERFSDITLLKKPEPMTIST-EENSQSEI---------GD 162
+ S+ +KPNLTLKM E + ERFSD+TLL+KPEP+ + EENS ++ G+
Sbjct: 199 EESKLRLKPNLTLKMRNERENERFSDMTLLRKPEPLNVDAGEENSGDKLPSDGLTMEEGE 258
Query: 163 KDL-KYDAVTLSEKPEMM--NHNFSREGEQESKNELTESNFNNIVNED--NFDISSSDNQ 327
+D Y TL EKPE N E EL E +I E N +ISS ++
Sbjct: 259 QDEGVYSEYTLLEKPEPRPEPENVEEEAGDSGAVELPEIENTSIPTEMQLNSEISSGSSE 318
Query: 328 LVTASSSNVNQ 360
T +S V +
Sbjct: 319 EKTINSDPVER 329