BLASTX nr result
ID: Rehmannia28_contig00013600
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia28_contig00013600
(347 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011075463.1| PREDICTED: probable mediator of RNA polymera... 122 1e-30
ref|XP_011079079.1| PREDICTED: probable mediator of RNA polymera... 88 3e-18
ref|XP_015088875.1| PREDICTED: probable mediator of RNA polymera... 73 6e-13
ref|XP_009613484.1| PREDICTED: probable mediator of RNA polymera... 71 3e-12
ref|XP_004249321.1| PREDICTED: probable mediator of RNA polymera... 69 2e-11
ref|XP_006339256.1| PREDICTED: probable mediator of RNA polymera... 68 3e-11
ref|XP_009790095.1| PREDICTED: probable mediator of RNA polymera... 67 6e-11
ref|XP_010317834.1| PREDICTED: probable mediator of RNA polymera... 64 6e-10
ref|XP_010653635.1| PREDICTED: probable mediator of RNA polymera... 60 2e-08
emb|CDP19596.1| unnamed protein product [Coffea canephora] 60 2e-08
ref|XP_010653636.1| PREDICTED: probable mediator of RNA polymera... 59 8e-08
ref|XP_002517284.1| PREDICTED: probable mediator of RNA polymera... 58 2e-07
emb|CBI32806.3| unnamed protein product [Vitis vinifera] 57 3e-07
gb|EYU20814.1| hypothetical protein MIMGU_mgv1a007273mg [Erythra... 57 4e-07
ref|XP_012857448.1| PREDICTED: probable mediator of RNA polymera... 57 4e-07
gb|EYU18603.1| hypothetical protein MIMGU_mgv1a006753mg [Erythra... 55 1e-06
ref|XP_012828170.1| PREDICTED: probable mediator of RNA polymera... 55 1e-06
ref|XP_010271900.1| PREDICTED: probable mediator of RNA polymera... 53 9e-06
>ref|XP_011075463.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26b [Sesamum indicum]
Length = 471
Score = 122 bits (306), Expect = 1e-30
Identities = 64/114 (56%), Positives = 76/114 (66%)
Frame = +2
Query: 2 ENGRKRRPEKTDVPRRNFEGPDDSNAPLNNDSKGENKRNQESMLRKQAPPSKPNRPPKIE 181
E+GRK EK + E PDDS L + + E RN E +LRKQAPPSKPNRPP E
Sbjct: 291 ESGRKLNLEKINNRNWKVESPDDSRPLLPKEKRAEQMRNVEPILRKQAPPSKPNRPPGGE 350
Query: 182 SGPLKPKPPSDELGTRRPKPVVQLKAKNEIMARQKSDEGTMQKKPVPCQQEKLN 343
SGP +P+PPS E G RP+P V+ K NEI +QKSD GT+QKKP+P QQEK N
Sbjct: 351 SGPGRPRPPSSESGPGRPRPAVRPKPNNEIKVQQKSDTGTIQKKPMP-QQEKSN 403
>ref|XP_011079079.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26b [Sesamum indicum]
Length = 441
Score = 88.2 bits (217), Expect = 3e-18
Identities = 52/114 (45%), Positives = 63/114 (55%)
Frame = +2
Query: 5 NGRKRRPEKTDVPRRNFEGPDDSNAPLNNDSKGENKRNQESMLRKQAPPSKPNRPPKIES 184
N R R + ++ FE P DS+ D K E K NQES+L+KQAPP KPNR
Sbjct: 277 NPRDNRALNKNQEKQKFESPSDSSTH-PKDQKSEQKTNQESILKKQAPPCKPNR------ 329
Query: 185 GPLKPKPPSDELGTRRPKPVVQLKAKNEIMARQKSDEGTMQKKPVPCQQEKLNC 346
P+DE TRRPKP +Q K+ NE M +QK GT KKP P QQE +C
Sbjct: 330 ------LPTDESATRRPKPALQPKSNNETMIQQK---GTKPKKPSPHQQENFDC 374
>ref|XP_015088875.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26b [Solanum pennellii]
Length = 455
Score = 73.2 bits (178), Expect = 6e-13
Identities = 44/113 (38%), Positives = 66/113 (58%), Gaps = 1/113 (0%)
Frame = +2
Query: 5 NGRKRRPEKTDVPRRNFEGPDDSNAPLNNDSKGENKRNQESMLRKQAPPSKPNRPPKIES 184
NGRK ++P + + D SNA ++KGE ++ QE++++KQ +KP +P ES
Sbjct: 282 NGRKPSLGNQNIPFQKKQSADCSNAS-PKENKGEQQKKQEAVIKKQTTVAKPTKPSGGES 340
Query: 185 GPLKPKPPSDELGTRRPKPVVQLKAK-NEIMARQKSDEGTMQKKPVPCQQEKL 340
GP +P KP ++ K K NE+ +QKSD+GT+QK+PV QQ KL
Sbjct: 341 GPGRP-----------TKPALEQKLKVNEMNFQQKSDKGTIQKRPVESQQNKL 382
>ref|XP_009613484.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26b [Nicotiana tomentosiformis]
Length = 461
Score = 71.2 bits (173), Expect = 3e-12
Identities = 44/113 (38%), Positives = 66/113 (58%), Gaps = 1/113 (0%)
Frame = +2
Query: 5 NGRKRRPEKTDVPRRNFEGPDDSNAPLNNDSKGENKRNQESMLRKQAPPSKPNRPPKIES 184
NGRK + + P R + D +A +SKGE ++ QE++++KQ P +PN+P +S
Sbjct: 287 NGRKLSLDNQNNPVRKKQSADFFDAA-PKESKGEQQKKQEAVIKKQTPVMRPNKPSGGDS 345
Query: 185 GPLKPKPPSDELGTRRPKPVVQLKAK-NEIMARQKSDEGTMQKKPVPCQQEKL 340
GP +P KPV + K K +E+ +QKSD+GT+QK+PVP Q KL
Sbjct: 346 GPGRP-----------IKPVSEQKLKMSEMNFQQKSDKGTVQKRPVPSQLNKL 387
>ref|XP_004249321.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26b [Solanum lycopersicum]
Length = 455
Score = 68.9 bits (167), Expect = 2e-11
Identities = 42/113 (37%), Positives = 64/113 (56%), Gaps = 1/113 (0%)
Frame = +2
Query: 5 NGRKRRPEKTDVPRRNFEGPDDSNAPLNNDSKGENKRNQESMLRKQAPPSKPNRPPKIES 184
NGRK ++P + + D NA ++KGE ++ QE++++KQ +KP +P E
Sbjct: 282 NGRKPSLGNQNIPLQKKQSADCFNAS-PKENKGEQQKKQEAVIKKQTTVAKPTKPSGGEF 340
Query: 185 GPLKPKPPSDELGTRRPKPVVQLKAK-NEIMARQKSDEGTMQKKPVPCQQEKL 340
GP +P KP ++ K K NE+ +QKSD+GT+QK+PV QQ KL
Sbjct: 341 GPGRP-----------TKPALEQKLKVNEMNFQQKSDKGTIQKRPVASQQNKL 382
>ref|XP_006339256.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26b [Solanum tuberosum]
Length = 455
Score = 68.2 bits (165), Expect = 3e-11
Identities = 43/113 (38%), Positives = 64/113 (56%), Gaps = 1/113 (0%)
Frame = +2
Query: 5 NGRKRRPEKTDVPRRNFEGPDDSNAPLNNDSKGENKRNQESMLRKQAPPSKPNRPPKIES 184
NGRK ++P + + D NA ++KGE ++ QE++++KQ KP +P ES
Sbjct: 282 NGRKPSLGNQNIPFQKKQSADCFNAS-PKENKGEQQKKQEAVIKKQTTVVKPTKPSGGES 340
Query: 185 GPLKPKPPSDELGTRRPKPVVQLKAK-NEIMARQKSDEGTMQKKPVPCQQEKL 340
GP +P KP ++ K K NE+ +QKSD+GT+QK+PV QQ KL
Sbjct: 341 GPGRP-----------IKPALEQKLKVNEMNFQQKSDKGTIQKRPVAPQQNKL 382
>ref|XP_009790095.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26b [Nicotiana sylvestris]
Length = 457
Score = 67.4 bits (163), Expect = 6e-11
Identities = 42/113 (37%), Positives = 64/113 (56%), Gaps = 1/113 (0%)
Frame = +2
Query: 5 NGRKRRPEKTDVPRRNFEGPDDSNAPLNNDSKGENKRNQESMLRKQAPPSKPNRPPKIES 184
NGRK + + P R + D +A + K E ++ QE++++KQ P +PN+P +S
Sbjct: 283 NGRKSSLDDQNNPVRKKQSADFFDAA-PKERKSEQQKKQETVIKKQTPVMRPNKPCGGDS 341
Query: 185 GPLKPKPPSDELGTRRPKPVVQLKAK-NEIMARQKSDEGTMQKKPVPCQQEKL 340
GP +P KPV + K K +E+ +QKSD+GT+ K+PVP QQ KL
Sbjct: 342 GPGRP-----------IKPVSEQKLKMSEMNFQQKSDQGTVHKRPVPTQQNKL 383
>ref|XP_010317834.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26b [Solanum lycopersicum]
Length = 260
Score = 63.9 bits (154), Expect = 6e-10
Identities = 41/113 (36%), Positives = 63/113 (55%), Gaps = 1/113 (0%)
Frame = +2
Query: 5 NGRKRRPEKTDVPRRNFEGPDDSNAPLNNDSKGENKRNQESMLRKQAPPSKPNRPPKIES 184
NGRK ++P + + D NA ++KGE ++ QE++++KQ +K +P ES
Sbjct: 90 NGRKPSLGNQNIPLQKKQSADCFNAS-PKENKGEQQKKQEAVIKKQTIVAKLTKPSGGES 148
Query: 185 GPLKPKPPSDELGTRRPKPVVQLKAK-NEIMARQKSDEGTMQKKPVPCQQEKL 340
GP +P KP ++ K K NE+ +QKS +GT+QK+PV QQ KL
Sbjct: 149 GPGRP-----------TKPALEQKLKVNEMNFQQKSHKGTIQKRPVASQQNKL 190
>ref|XP_010653635.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26b isoform X1 [Vitis vinifera]
Length = 477
Score = 60.5 bits (145), Expect = 2e-08
Identities = 40/125 (32%), Positives = 60/125 (48%), Gaps = 13/125 (10%)
Frame = +2
Query: 2 ENGRKRRPEKTDVPRRNFEGPDDSNAPLNNDSKGENKRNQESMLRKQAPPS--------- 154
ENGRK E ++ +R + PD++N + KG+ + QE +++ P +
Sbjct: 296 ENGRKPALENQNISKRKQQLPDEANGVTKD--KGQQIKKQEPVVKSNKPINTQSGFGRPQ 353
Query: 155 ----KPNRPPKIESGPLKPKPPSDELGTRRPKPVVQLKAKNEIMARQKSDEGTMQKKPVP 322
+PNRP +SGP +P PKP V K NE QKSD+ + +KPV
Sbjct: 354 EILVRPNRPSNTDSGPGRP-----------PKPGVGQKVNNETKFLQKSDKPAIHRKPVV 402
Query: 323 CQQEK 337
QQ+K
Sbjct: 403 GQQDK 407
>emb|CDP19596.1| unnamed protein product [Coffea canephora]
Length = 474
Score = 60.1 bits (144), Expect = 2e-08
Identities = 42/120 (35%), Positives = 61/120 (50%), Gaps = 7/120 (5%)
Frame = +2
Query: 2 ENGRKRRPEKTDVPRRNFEGPDDSNAPLNNDSKGENKRNQESM-------LRKQAPPSKP 160
+NGRK E VPR+ + + +P D KGE + QE++ ++KQA +KP
Sbjct: 303 DNGRKPSLENHTVPRQKQQIRGNLISP-PKDRKGEQMKKQEAVTKKQEAVMKKQAAVAKP 361
Query: 161 NRPPKIESGPLKPKPPSDELGTRRPKPVVQLKAKNEIMARQKSDEGTMQKKPVPCQQEKL 340
N+P ESGP +P PS + +P +QKSD+GT QK+ +P Q KL
Sbjct: 362 NKPSFGESGPGRPAKPSVDQYHMKP--------------QQKSDKGTSQKRELPSQPNKL 407
>ref|XP_010653636.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26b isoform X2 [Vitis vinifera]
Length = 476
Score = 58.5 bits (140), Expect = 8e-08
Identities = 39/124 (31%), Positives = 59/124 (47%), Gaps = 13/124 (10%)
Frame = +2
Query: 2 ENGRKRRPEKTDVPRRNFEGPDDSNAPLNNDSKGENKRNQESMLRKQAPPS--------- 154
ENGRK E ++ +R + PD++N + KG+ + QE +++ P +
Sbjct: 296 ENGRKPALENQNISKRKQQLPDEANGVTKD--KGQQIKKQEPVVKSNKPINTQSGFGRPQ 353
Query: 155 ----KPNRPPKIESGPLKPKPPSDELGTRRPKPVVQLKAKNEIMARQKSDEGTMQKKPVP 322
+PNRP +SGP +P PKP V K NE QKSD+ + +KPV
Sbjct: 354 EILVRPNRPSNTDSGPGRP-----------PKPGVGQKVNNETKFLQKSDKPAIHRKPVV 402
Query: 323 CQQE 334
QQ+
Sbjct: 403 GQQD 406
>ref|XP_002517284.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26b [Ricinus communis]
gi|223543547|gb|EEF45077.1| conserved hypothetical
protein [Ricinus communis]
Length = 473
Score = 57.8 bits (138), Expect = 2e-07
Identities = 38/115 (33%), Positives = 56/115 (48%)
Frame = +2
Query: 2 ENGRKRRPEKTDVPRRNFEGPDDSNAPLNNDSKGENKRNQESMLRKQAPPSKPNRPPKIE 181
ENGRK E+ ++P+R P ++N + D+K R QE+M KPN+P
Sbjct: 308 ENGRKSSLEQKNIPKRKEHTPSEANV-VAKDNKSHQSRRQEAM-------RKPNKPSTTV 359
Query: 182 SGPLKPKPPSDELGTRRPKPVVQLKAKNEIMARQKSDEGTMQKKPVPCQQEKLNC 346
SGP +P K V+ KA NE ++K+D+ Q+K QQ+K C
Sbjct: 360 SGPGRP-----------TKQSVEQKANNESKIQRKTDKLVTQRKLPGGQQDKFKC 403
>emb|CBI32806.3| unnamed protein product [Vitis vinifera]
Length = 337
Score = 57.0 bits (136), Expect = 3e-07
Identities = 39/107 (36%), Positives = 48/107 (44%), Gaps = 12/107 (11%)
Frame = +2
Query: 53 FEGPDDSNAPLNNDSKGENKRN--------QESMLRKQAPPS----KPNRPPKIESGPLK 196
F+G DD P NN N+ N Q RKQ P +PNRP +SGP +
Sbjct: 172 FDGMDDDGNPRNNGEFNRNRENGRKPALENQNISKRKQQLPDEANVRPNRPSNTDSGPGR 231
Query: 197 PKPPSDELGTRRPKPVVQLKAKNEIMARQKSDEGTMQKKPVPCQQEK 337
P PKP V K NE QKSD+ + +KPV QQ+K
Sbjct: 232 P-----------PKPGVGQKVNNETKFLQKSDKPAIHRKPVVGQQDK 267
>gb|EYU20814.1| hypothetical protein MIMGU_mgv1a007273mg [Erythranthe guttata]
Length = 413
Score = 56.6 bits (135), Expect = 4e-07
Identities = 41/104 (39%), Positives = 54/104 (51%), Gaps = 7/104 (6%)
Frame = +2
Query: 53 FEGPDDSNAPLNNDSKGENKRN------QESMLRKQAPPSKPNRPPKIESGPLKPKPPSD 214
F+G DD+ P N+ +N+ N +ES+L KQ P KP+ P ESGP +PK
Sbjct: 264 FDGIDDNGNPQNSGEFDKNRENGRERSIEESVLNKQVRPVKPSGPHNGESGPGRPK---- 319
Query: 215 ELGTRRPKPVVQLKAKNEIMARQKSDEGTMQKKPVP-CQQEKLN 343
V L++K +QKSD +QKKPVP QQ KLN
Sbjct: 320 ----------VALQSK----VQQKSDGDAVQKKPVPNHQQAKLN 349
>ref|XP_012857448.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26b [Erythranthe guttata]
Length = 429
Score = 56.6 bits (135), Expect = 4e-07
Identities = 41/104 (39%), Positives = 54/104 (51%), Gaps = 7/104 (6%)
Frame = +2
Query: 53 FEGPDDSNAPLNNDSKGENKRN------QESMLRKQAPPSKPNRPPKIESGPLKPKPPSD 214
F+G DD+ P N+ +N+ N +ES+L KQ P KP+ P ESGP +PK
Sbjct: 280 FDGIDDNGNPQNSGEFDKNRENGRERSIEESVLNKQVRPVKPSGPHNGESGPGRPK---- 335
Query: 215 ELGTRRPKPVVQLKAKNEIMARQKSDEGTMQKKPVP-CQQEKLN 343
V L++K +QKSD +QKKPVP QQ KLN
Sbjct: 336 ----------VALQSK----VQQKSDGDAVQKKPVPNHQQAKLN 365
>gb|EYU18603.1| hypothetical protein MIMGU_mgv1a006753mg [Erythranthe guttata]
Length = 433
Score = 55.1 bits (131), Expect = 1e-06
Identities = 39/115 (33%), Positives = 54/115 (46%), Gaps = 2/115 (1%)
Frame = +2
Query: 5 NGRKRRPEKTDVPRRNFEGPDDSNAPLNNDSKGENKRNQESMLRKQA--PPSKPNRPPKI 178
+GR KTD R + + + E K+ E+ML++Q PPS+ NRPP
Sbjct: 277 SGRNPNLVKTDARRSSLDERKERKIV-------EEKKAPEAMLKRQQCPPPSRTNRPP-- 327
Query: 179 ESGPLKPKPPSDELGTRRPKPVVQLKAKNEIMARQKSDEGTMQKKPVPCQQEKLN 343
PS E G RPKP + Q ++ G +Q+KP+P QQEKLN
Sbjct: 328 ---------PSSESGPGRPKPAA--------IKPQANNNGAIQRKPMPTQQEKLN 365
>ref|XP_012828170.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26b [Erythranthe guttata]
Length = 455
Score = 55.1 bits (131), Expect = 1e-06
Identities = 39/115 (33%), Positives = 54/115 (46%), Gaps = 2/115 (1%)
Frame = +2
Query: 5 NGRKRRPEKTDVPRRNFEGPDDSNAPLNNDSKGENKRNQESMLRKQA--PPSKPNRPPKI 178
+GR KTD R + + + E K+ E+ML++Q PPS+ NRPP
Sbjct: 299 SGRNPNLVKTDARRSSLDERKERKIV-------EEKKAPEAMLKRQQCPPPSRTNRPP-- 349
Query: 179 ESGPLKPKPPSDELGTRRPKPVVQLKAKNEIMARQKSDEGTMQKKPVPCQQEKLN 343
PS E G RPKP + Q ++ G +Q+KP+P QQEKLN
Sbjct: 350 ---------PSSESGPGRPKPAA--------IKPQANNNGAIQRKPMPTQQEKLN 387
>ref|XP_010271900.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26b [Nelumbo nucifera]
gi|720050840|ref|XP_010271901.1| PREDICTED: probable
mediator of RNA polymerase II transcription subunit 26b
[Nelumbo nucifera]
Length = 440
Score = 52.8 bits (125), Expect = 9e-06
Identities = 33/115 (28%), Positives = 57/115 (49%)
Frame = +2
Query: 2 ENGRKRRPEKTDVPRRNFEGPDDSNAPLNNDSKGENKRNQESMLRKQAPPSKPNRPPKIE 181
ENGRK + ++PRR + P +N L ++KG+ + K P K +P +
Sbjct: 278 ENGRKMSLDNHNIPRRKQQPPHGANM-LTKENKGQQ-------VHKLEPVIKQTKPFATD 329
Query: 182 SGPLKPKPPSDELGTRRPKPVVQLKAKNEIMARQKSDEGTMQKKPVPCQQEKLNC 346
+GP +P PK ++ +A NE ++QK + +Q++P+ QQ+K C
Sbjct: 330 TGPGRP-----------PKLSLEHRANNETKSQQKPESMGIQRRPIASQQDKSKC 373