BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00012555
         (477 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_012845852.1| PREDICTED: replication factor C subunit 3 [E...    88   9e-18
ref|XP_012464020.1| PREDICTED: replication factor C subunit 3-li...    85   7e-17
ref|XP_012464019.1| PREDICTED: replication factor C subunit 3-li...    85   1e-16
ref|XP_011069963.1| PREDICTED: replication factor C subunit 3 [S...    85   1e-16
ref|XP_008442036.1| PREDICTED: replication factor C subunit 3 [C...    85   1e-16
gb|KDO66054.1| hypothetical protein CISIN_1g017844mg [Citrus sin...    83   1e-16
gb|KJB44483.1| hypothetical protein B456_007G255400 [Gossypium r...    84   1e-16
gb|KHG10824.1| Replication factor C subunit 3 [Gossypium arboreum]     84   2e-16
ref|XP_007029982.1| ATPase family associated with various cellul...    84   2e-16
gb|KHG16936.1| Replication factor C subunit 3 [Gossypium arboreum]     85   2e-16
ref|XP_012492457.1| PREDICTED: replication factor C subunit 3 [G...    84   2e-16
ref|XP_008237263.1| PREDICTED: replication factor C subunit 3-li...    84   2e-16
ref|XP_007029981.1| ATPase family associated with various cellul...    84   2e-16
ref|XP_006443505.1| hypothetical protein CICLE_v10020854mg [Citr...    83   2e-16
ref|XP_004144654.1| PREDICTED: replication factor C subunit 3 [C...    84   3e-16
gb|AFK46759.1| unknown [Lotus japonicus]                               81   4e-16
ref|XP_002525685.1| PREDICTED: replication factor C subunit 3 [R...    83   4e-16
ref|XP_002325862.1| hypothetical protein POPTR_0019s05640g [Popu...    83   4e-16
ref|XP_011004778.1| PREDICTED: replication factor C subunit 3 [P...    83   4e-16
gb|KDO66052.1| hypothetical protein CISIN_1g017844mg [Citrus sin...    83   4e-16

>ref|XP_012845852.1| PREDICTED: replication factor C subunit 3 [Erythranthe guttata]
           gi|604318956|gb|EYU30337.1| hypothetical protein
           MIMGU_mgv1a009049mg [Erythranthe guttata]
          Length = 354

 Score = 87.8 bits (216), Expect = 9e-18
 Identities = 43/47 (91%), Positives = 46/47 (97%)
 Frame = -3

Query: 142 QIVKVLEFIGKKEGLQLPSGFADRIAQQSNRSLRRAILSFETCRVQR 2
           +I KVLEFIGKKEGLQLPSGF+DRIAQQSNRSLRRAILSFETCRVQ+
Sbjct: 193 EIAKVLEFIGKKEGLQLPSGFSDRIAQQSNRSLRRAILSFETCRVQQ 239


>ref|XP_012464020.1| PREDICTED: replication factor C subunit 3-like isoform X2
           [Gossypium raimondii] gi|763815593|gb|KJB82445.1|
           hypothetical protein B456_013G195900 [Gossypium
           raimondii]
          Length = 303

 Score = 84.7 bits (208), Expect = 7e-17
 Identities = 41/47 (87%), Positives = 46/47 (97%)
 Frame = -3

Query: 142 QIVKVLEFIGKKEGLQLPSGFADRIAQQSNRSLRRAILSFETCRVQR 2
           QI+KV+EFIGKKEGLQLPSGFA RIA++SNRSLRRAILSFETCRVQ+
Sbjct: 142 QIIKVIEFIGKKEGLQLPSGFAARIAEKSNRSLRRAILSFETCRVQQ 188


>ref|XP_012464019.1| PREDICTED: replication factor C subunit 3-like isoform X1
           [Gossypium raimondii] gi|763815594|gb|KJB82446.1|
           hypothetical protein B456_013G195900 [Gossypium
           raimondii]
          Length = 354

 Score = 84.7 bits (208), Expect = 1e-16
 Identities = 41/47 (87%), Positives = 46/47 (97%)
 Frame = -3

Query: 142 QIVKVLEFIGKKEGLQLPSGFADRIAQQSNRSLRRAILSFETCRVQR 2
           QI+KV+EFIGKKEGLQLPSGFA RIA++SNRSLRRAILSFETCRVQ+
Sbjct: 193 QIIKVIEFIGKKEGLQLPSGFAARIAEKSNRSLRRAILSFETCRVQQ 239


>ref|XP_011069963.1| PREDICTED: replication factor C subunit 3 [Sesamum indicum]
          Length = 354

 Score = 84.7 bits (208), Expect = 1e-16
 Identities = 42/47 (89%), Positives = 44/47 (93%)
 Frame = -3

Query: 142 QIVKVLEFIGKKEGLQLPSGFADRIAQQSNRSLRRAILSFETCRVQR 2
           +I  VLEFI KKEGLQLPSGFADRIAQQSNRSLRRAILSFETCRVQ+
Sbjct: 193 EIANVLEFISKKEGLQLPSGFADRIAQQSNRSLRRAILSFETCRVQQ 239


>ref|XP_008442036.1| PREDICTED: replication factor C subunit 3 [Cucumis melo]
           gi|659082799|ref|XP_008442037.1| PREDICTED: replication
           factor C subunit 3 [Cucumis melo]
           gi|659082801|ref|XP_008442038.1| PREDICTED: replication
           factor C subunit 3 [Cucumis melo]
          Length = 354

 Score = 84.7 bits (208), Expect = 1e-16
 Identities = 42/47 (89%), Positives = 46/47 (97%)
 Frame = -3

Query: 142 QIVKVLEFIGKKEGLQLPSGFADRIAQQSNRSLRRAILSFETCRVQR 2
           QIVKVLEFIGKKEGLQLPSGFA RIA++S+RSLRRAILSFETCRVQ+
Sbjct: 193 QIVKVLEFIGKKEGLQLPSGFASRIAEKSSRSLRRAILSFETCRVQQ 239


>gb|KDO66054.1| hypothetical protein CISIN_1g017844mg [Citrus sinensis]
          Length = 248

 Score = 83.2 bits (204), Expect = 1e-16
 Identities = 41/47 (87%), Positives = 45/47 (95%)
 Frame = -3

Query: 142 QIVKVLEFIGKKEGLQLPSGFADRIAQQSNRSLRRAILSFETCRVQR 2
           QIVKVLEFI KKEGLQLPSGFA R+A++SNRSLRRAILSFETCRVQ+
Sbjct: 193 QIVKVLEFIAKKEGLQLPSGFATRLAEKSNRSLRRAILSFETCRVQQ 239


>gb|KJB44483.1| hypothetical protein B456_007G255400 [Gossypium raimondii]
          Length = 296

 Score = 84.0 bits (206), Expect = 1e-16
 Identities = 41/47 (87%), Positives = 46/47 (97%)
 Frame = -3

Query: 142 QIVKVLEFIGKKEGLQLPSGFADRIAQQSNRSLRRAILSFETCRVQR 2
           QIVKVLEFIGKKEGLQ+PSGFA RIA++SNR+LRRAILSFETCRVQ+
Sbjct: 135 QIVKVLEFIGKKEGLQIPSGFAARIAEKSNRNLRRAILSFETCRVQQ 181


>gb|KHG10824.1| Replication factor C subunit 3 [Gossypium arboreum]
          Length = 354

 Score = 84.3 bits (207), Expect = 2e-16
 Identities = 41/47 (87%), Positives = 46/47 (97%)
 Frame = -3

Query: 142 QIVKVLEFIGKKEGLQLPSGFADRIAQQSNRSLRRAILSFETCRVQR 2
           QIVKVLEF+GKKEGLQLPSGFA RIA++SNR+LRRAILSFETCRVQ+
Sbjct: 193 QIVKVLEFVGKKEGLQLPSGFAARIAEKSNRNLRRAILSFETCRVQQ 239


>ref|XP_007029982.1| ATPase family associated with various cellular activities (AAA)
           isoform 2, partial [Theobroma cacao]
           gi|508718587|gb|EOY10484.1| ATPase family associated
           with various cellular activities (AAA) isoform 2,
           partial [Theobroma cacao]
          Length = 321

 Score = 84.0 bits (206), Expect = 2e-16
 Identities = 40/47 (85%), Positives = 46/47 (97%)
 Frame = -3

Query: 142 QIVKVLEFIGKKEGLQLPSGFADRIAQQSNRSLRRAILSFETCRVQR 2
           QI+KVLEF+GKKEGLQLPSGFA RIA+++NRSLRRAILSFETCRVQ+
Sbjct: 193 QIIKVLEFVGKKEGLQLPSGFAARIAEKTNRSLRRAILSFETCRVQQ 239


>gb|KHG16936.1| Replication factor C subunit 3 [Gossypium arboreum]
          Length = 441

 Score = 84.7 bits (208), Expect = 2e-16
 Identities = 41/47 (87%), Positives = 46/47 (97%)
 Frame = -3

Query: 142 QIVKVLEFIGKKEGLQLPSGFADRIAQQSNRSLRRAILSFETCRVQR 2
           QI+KV+EFIGKKEGLQLPSGFA RIA++SNRSLRRAILSFETCRVQ+
Sbjct: 193 QIIKVIEFIGKKEGLQLPSGFAARIAEKSNRSLRRAILSFETCRVQQ 239


>ref|XP_012492457.1| PREDICTED: replication factor C subunit 3 [Gossypium raimondii]
           gi|763777359|gb|KJB44482.1| hypothetical protein
           B456_007G255400 [Gossypium raimondii]
          Length = 354

 Score = 84.0 bits (206), Expect = 2e-16
 Identities = 41/47 (87%), Positives = 46/47 (97%)
 Frame = -3

Query: 142 QIVKVLEFIGKKEGLQLPSGFADRIAQQSNRSLRRAILSFETCRVQR 2
           QIVKVLEFIGKKEGLQ+PSGFA RIA++SNR+LRRAILSFETCRVQ+
Sbjct: 193 QIVKVLEFIGKKEGLQIPSGFAARIAEKSNRNLRRAILSFETCRVQQ 239


>ref|XP_008237263.1| PREDICTED: replication factor C subunit 3-like [Prunus mume]
          Length = 354

 Score = 84.0 bits (206), Expect = 2e-16
 Identities = 42/47 (89%), Positives = 45/47 (95%)
 Frame = -3

Query: 142 QIVKVLEFIGKKEGLQLPSGFADRIAQQSNRSLRRAILSFETCRVQR 2
           QIVKVLEFIGKKEGLQLPSGF  RIA++SNRSLRRAILSFETCRVQ+
Sbjct: 193 QIVKVLEFIGKKEGLQLPSGFPARIAEKSNRSLRRAILSFETCRVQQ 239


>ref|XP_007029981.1| ATPase family associated with various cellular activities (AAA)
           isoform 1 [Theobroma cacao] gi|508718586|gb|EOY10483.1|
           ATPase family associated with various cellular
           activities (AAA) isoform 1 [Theobroma cacao]
          Length = 354

 Score = 84.0 bits (206), Expect = 2e-16
 Identities = 40/47 (85%), Positives = 46/47 (97%)
 Frame = -3

Query: 142 QIVKVLEFIGKKEGLQLPSGFADRIAQQSNRSLRRAILSFETCRVQR 2
           QI+KVLEF+GKKEGLQLPSGFA RIA+++NRSLRRAILSFETCRVQ+
Sbjct: 193 QIIKVLEFVGKKEGLQLPSGFAARIAEKTNRSLRRAILSFETCRVQQ 239


>ref|XP_006443505.1| hypothetical protein CICLE_v10020854mg [Citrus clementina]
           gi|557545767|gb|ESR56745.1| hypothetical protein
           CICLE_v10020854mg [Citrus clementina]
          Length = 295

 Score = 83.2 bits (204), Expect = 2e-16
 Identities = 41/47 (87%), Positives = 45/47 (95%)
 Frame = -3

Query: 142 QIVKVLEFIGKKEGLQLPSGFADRIAQQSNRSLRRAILSFETCRVQR 2
           QIVKVLEFI KKEGLQLPSGFA R+A++SNRSLRRAILSFETCRVQ+
Sbjct: 193 QIVKVLEFIAKKEGLQLPSGFATRLAEKSNRSLRRAILSFETCRVQQ 239


>ref|XP_004144654.1| PREDICTED: replication factor C subunit 3 [Cucumis sativus]
           gi|700199742|gb|KGN54900.1| hypothetical protein
           Csa_4G579870 [Cucumis sativus]
          Length = 354

 Score = 83.6 bits (205), Expect = 3e-16
 Identities = 41/47 (87%), Positives = 45/47 (95%)
 Frame = -3

Query: 142 QIVKVLEFIGKKEGLQLPSGFADRIAQQSNRSLRRAILSFETCRVQR 2
           QI KVLE+IGKKEGLQLPSGFA RIA++SNRSLRRAILSFETCRVQ+
Sbjct: 193 QIFKVLEYIGKKEGLQLPSGFASRIAEKSNRSLRRAILSFETCRVQQ 239


>gb|AFK46759.1| unknown [Lotus japonicus]
          Length = 201

 Score = 80.9 bits (198), Expect = 4e-16
 Identities = 39/47 (82%), Positives = 45/47 (95%)
 Frame = -3

Query: 142 QIVKVLEFIGKKEGLQLPSGFADRIAQQSNRSLRRAILSFETCRVQR 2
           QIV+V+EFIGKKEGLQ PSGFA RIA++SNR+LRRAILSFETCRVQ+
Sbjct: 40  QIVEVIEFIGKKEGLQFPSGFAARIAEKSNRNLRRAILSFETCRVQQ 86


>ref|XP_002525685.1| PREDICTED: replication factor C subunit 3 [Ricinus communis]
           gi|223534985|gb|EEF36668.1| replication factor C / DNA
           polymerase III gamma-tau subunit, putative [Ricinus
           communis]
          Length = 342

 Score = 83.2 bits (204), Expect = 4e-16
 Identities = 40/47 (85%), Positives = 45/47 (95%)
 Frame = -3

Query: 142 QIVKVLEFIGKKEGLQLPSGFADRIAQQSNRSLRRAILSFETCRVQR 2
           QIVKVLEFIGKKEGLQLP GFA R+A++SNRSLRRA+LSFETCRVQ+
Sbjct: 194 QIVKVLEFIGKKEGLQLPHGFAARVAEKSNRSLRRAVLSFETCRVQQ 240


>ref|XP_002325862.1| hypothetical protein POPTR_0019s05640g [Populus trichocarpa]
           gi|222862737|gb|EEF00244.1| hypothetical protein
           POPTR_0019s05640g [Populus trichocarpa]
          Length = 353

 Score = 83.2 bits (204), Expect = 4e-16
 Identities = 42/47 (89%), Positives = 44/47 (93%)
 Frame = -3

Query: 142 QIVKVLEFIGKKEGLQLPSGFADRIAQQSNRSLRRAILSFETCRVQR 2
           QIVKVLEFIGKKEGLQLP GFA RIA +SNRSLRRAILSFETCRVQ+
Sbjct: 193 QIVKVLEFIGKKEGLQLPPGFAARIADKSNRSLRRAILSFETCRVQQ 239


>ref|XP_011004778.1| PREDICTED: replication factor C subunit 3 [Populus euphratica]
          Length = 354

 Score = 83.2 bits (204), Expect = 4e-16
 Identities = 42/47 (89%), Positives = 44/47 (93%)
 Frame = -3

Query: 142 QIVKVLEFIGKKEGLQLPSGFADRIAQQSNRSLRRAILSFETCRVQR 2
           QIVKVLEFIGKKEGLQLP GFA RIA +SNRSLRRAILSFETCRVQ+
Sbjct: 193 QIVKVLEFIGKKEGLQLPPGFAARIADKSNRSLRRAILSFETCRVQQ 239


>gb|KDO66052.1| hypothetical protein CISIN_1g017844mg [Citrus sinensis]
          Length = 354

 Score = 83.2 bits (204), Expect = 4e-16
 Identities = 41/47 (87%), Positives = 45/47 (95%)
 Frame = -3

Query: 142 QIVKVLEFIGKKEGLQLPSGFADRIAQQSNRSLRRAILSFETCRVQR 2
           QIVKVLEFI KKEGLQLPSGFA R+A++SNRSLRRAILSFETCRVQ+
Sbjct: 193 QIVKVLEFIAKKEGLQLPSGFATRLAEKSNRSLRRAILSFETCRVQQ 239