BLASTX nr result
ID: Rehmannia28_contig00012244
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia28_contig00012244
(433 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011076691.1| PREDICTED: pentatricopeptide repeat-containi... 105 5e-24
ref|XP_012833329.1| PREDICTED: pentatricopeptide repeat-containi... 99 1e-21
emb|CDO99567.1| unnamed protein product [Coffea canephora] 83 2e-17
ref|XP_009366382.1| PREDICTED: pentatricopeptide repeat-containi... 87 2e-17
ref|XP_008243240.1| PREDICTED: pentatricopeptide repeat-containi... 86 8e-17
ref|XP_008457507.1| PREDICTED: pentatricopeptide repeat-containi... 86 8e-17
ref|XP_008338990.1| PREDICTED: pentatricopeptide repeat-containi... 86 8e-17
ref|XP_007023261.1| Tetratricopeptide repeat-like superfamily pr... 85 1e-16
ref|XP_011656468.1| PREDICTED: pentatricopeptide repeat-containi... 83 7e-16
ref|XP_009625939.1| PREDICTED: pentatricopeptide repeat-containi... 82 1e-15
ref|XP_009771244.1| PREDICTED: pentatricopeptide repeat-containi... 81 2e-15
ref|XP_011464107.1| PREDICTED: pentatricopeptide repeat-containi... 80 4e-15
dbj|BAT75269.1| hypothetical protein VIGAN_01310300 [Vigna angul... 77 9e-15
ref|XP_006468706.1| PREDICTED: pentatricopeptide repeat-containi... 79 1e-14
ref|XP_006468705.1| PREDICTED: pentatricopeptide repeat-containi... 79 1e-14
ref|XP_006448464.1| hypothetical protein CICLE_v10017589mg [Citr... 79 1e-14
ref|XP_012443161.1| PREDICTED: pentatricopeptide repeat-containi... 79 2e-14
ref|XP_010094637.1| hypothetical protein L484_009882 [Morus nota... 78 3e-14
ref|XP_012573934.1| PREDICTED: pentatricopeptide repeat-containi... 77 5e-14
ref|XP_011022226.1| PREDICTED: pentatricopeptide repeat-containi... 77 5e-14
>ref|XP_011076691.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Sesamum indicum]
Length = 529
Score = 105 bits (263), Expect = 5e-24
Identities = 52/68 (76%), Positives = 59/68 (86%)
Frame = -3
Query: 431 RLKVAVRDTGCKKIPGFSSIQTDDGIVEFYSFDERHSKTEEIYFALRGLTKMLRLSGCRT 252
RLKVA+RDTG KK+PG+SSI TDDG VEFYSFDERHS+T+EIY ALRGLTK+LRLSG T
Sbjct: 449 RLKVAMRDTGSKKVPGWSSIDTDDGFVEFYSFDERHSRTDEIYCALRGLTKLLRLSGYET 508
Query: 251 NEMELVQE 228
+ EL QE
Sbjct: 509 DLTELGQE 516
>ref|XP_012833329.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Erythranthe guttata]
Length = 606
Score = 99.4 bits (246), Expect = 1e-21
Identities = 49/64 (76%), Positives = 53/64 (82%)
Frame = -3
Query: 431 RLKVAVRDTGCKKIPGFSSIQTDDGIVEFYSFDERHSKTEEIYFALRGLTKMLRLSGCRT 252
RLKVA+RDTG KK+PG SSIQTDD IVEFY FDERH KTEEIY ALRGLTK+LRL G
Sbjct: 540 RLKVAMRDTGSKKVPGLSSIQTDDEIVEFYCFDERHLKTEEIYCALRGLTKLLRLCGADP 599
Query: 251 NEME 240
E+E
Sbjct: 600 TELE 603
>emb|CDO99567.1| unnamed protein product [Coffea canephora]
Length = 152
Score = 82.8 bits (203), Expect = 2e-17
Identities = 41/67 (61%), Positives = 51/67 (76%)
Frame = -3
Query: 431 RLKVAVRDTGCKKIPGFSSIQTDDGIVEFYSFDERHSKTEEIYFALRGLTKMLRLSGCRT 252
RLKVA RDTG +K+PG SS++ +DG+VEFYSFDERHS +EEIY ALRGL +L G
Sbjct: 84 RLKVAERDTGSRKLPGCSSVEVEDGVVEFYSFDERHSSSEEIYDALRGLMNVLLSDGYVP 143
Query: 251 NEMELVQ 231
+ +EL Q
Sbjct: 144 DFVELGQ 150
>ref|XP_009366382.1| PREDICTED: pentatricopeptide repeat-containing protein At3g29230
[Pyrus x bretschneideri]
gi|694380519|ref|XP_009366383.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g29230
[Pyrus x bretschneideri]
gi|694380521|ref|XP_009366384.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g29230
[Pyrus x bretschneideri]
gi|694380523|ref|XP_009366385.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g29230
[Pyrus x bretschneideri]
gi|694380526|ref|XP_009366386.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g29230
[Pyrus x bretschneideri]
gi|694380528|ref|XP_009366387.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g29230
[Pyrus x bretschneideri]
Length = 613
Score = 87.0 bits (214), Expect = 2e-17
Identities = 44/67 (65%), Positives = 52/67 (77%)
Frame = -3
Query: 431 RLKVAVRDTGCKKIPGFSSIQTDDGIVEFYSFDERHSKTEEIYFALRGLTKMLRLSGCRT 252
RLKV++RDTG KK PG S I+ +DG+VEFYS D+RH KTEEIY AL GLTK+LR SG
Sbjct: 542 RLKVSMRDTGHKKFPGVSLIEVNDGVVEFYSLDKRHPKTEEIYGALMGLTKLLRSSGYVP 601
Query: 251 NEMELVQ 231
N +EL Q
Sbjct: 602 NILELGQ 608
>ref|XP_008243240.1| PREDICTED: pentatricopeptide repeat-containing protein At3g29230
[Prunus mume]
Length = 538
Score = 85.5 bits (210), Expect = 8e-17
Identities = 40/57 (70%), Positives = 48/57 (84%)
Frame = -3
Query: 431 RLKVAVRDTGCKKIPGFSSIQTDDGIVEFYSFDERHSKTEEIYFALRGLTKMLRLSG 261
RLKVA+RDTG KK+PG S I+ +DG+VEFYS DERH +TEEIY LRGLTK+L+ SG
Sbjct: 470 RLKVAMRDTGYKKVPGVSFIEANDGVVEFYSLDERHPETEEIYGVLRGLTKLLKSSG 526
>ref|XP_008457507.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Cucumis melo]
Length = 593
Score = 85.5 bits (210), Expect = 8e-17
Identities = 40/67 (59%), Positives = 51/67 (76%)
Frame = -3
Query: 431 RLKVAVRDTGCKKIPGFSSIQTDDGIVEFYSFDERHSKTEEIYFALRGLTKMLRLSGCRT 252
RLK+ +RDTGCKK+PG S I+ +D +VEFYS DERHS+++EIY L+GL K+LR G
Sbjct: 525 RLKILMRDTGCKKLPGCSLIEVNDSVVEFYSLDERHSQSQEIYGVLKGLMKLLRSFGYEP 584
Query: 251 NEMELVQ 231
N MEL Q
Sbjct: 585 NIMELQQ 591
>ref|XP_008338990.1| PREDICTED: pentatricopeptide repeat-containing protein At3g29230
[Malus domestica]
Length = 613
Score = 85.5 bits (210), Expect = 8e-17
Identities = 43/67 (64%), Positives = 52/67 (77%)
Frame = -3
Query: 431 RLKVAVRDTGCKKIPGFSSIQTDDGIVEFYSFDERHSKTEEIYFALRGLTKMLRLSGCRT 252
RLKV++RDTG KK PG S I+ +DG+VEFYS D+RH +TEEIY AL GLTK+LR SG
Sbjct: 542 RLKVSMRDTGHKKFPGVSLIEVNDGVVEFYSLDKRHPETEEIYGALMGLTKLLRSSGYVP 601
Query: 251 NEMELVQ 231
N +EL Q
Sbjct: 602 NILELGQ 608
>ref|XP_007023261.1| Tetratricopeptide repeat-like superfamily protein [Theobroma cacao]
gi|508778627|gb|EOY25883.1| Tetratricopeptide
repeat-like superfamily protein [Theobroma cacao]
Length = 539
Score = 84.7 bits (208), Expect = 1e-16
Identities = 43/67 (64%), Positives = 52/67 (77%)
Frame = -3
Query: 431 RLKVAVRDTGCKKIPGFSSIQTDDGIVEFYSFDERHSKTEEIYFALRGLTKMLRLSGCRT 252
RLKVA+RDTG KK+PG S I+ +DG+VEFYS DERH +T+EIY ALRGLTK+LR G
Sbjct: 471 RLKVAMRDTGRKKLPGCSLIEVNDGVVEFYSLDERHPETKEIYGALRGLTKLLRSCGYIP 530
Query: 251 NEMELVQ 231
+ EL Q
Sbjct: 531 DLQELGQ 537
>ref|XP_011656468.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|700190688|gb|KGN45892.1| hypothetical protein
Csa_6G017080 [Cucumis sativus]
Length = 538
Score = 82.8 bits (203), Expect = 7e-16
Identities = 39/67 (58%), Positives = 51/67 (76%)
Frame = -3
Query: 431 RLKVAVRDTGCKKIPGFSSIQTDDGIVEFYSFDERHSKTEEIYFALRGLTKMLRLSGCRT 252
RLK+ +RDTG KK+PG S I+ +D +VEFYS DERHS+++EIY L+GL K+LR G
Sbjct: 470 RLKILMRDTGSKKLPGCSLIEVNDSVVEFYSLDERHSQSKEIYGVLKGLMKLLRSFGYEP 529
Query: 251 NEMELVQ 231
N MEL+Q
Sbjct: 530 NMMELLQ 536
>ref|XP_009625939.1| PREDICTED: pentatricopeptide repeat-containing protein At3g29230
[Nicotiana tomentosiformis]
gi|697098282|ref|XP_009625943.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g29230
[Nicotiana tomentosiformis]
gi|697098284|ref|XP_009625945.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g29230
[Nicotiana tomentosiformis]
gi|697098286|ref|XP_009625950.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g29230
[Nicotiana tomentosiformis]
gi|697098288|ref|XP_009625956.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g29230
[Nicotiana tomentosiformis]
Length = 549
Score = 82.0 bits (201), Expect = 1e-15
Identities = 41/67 (61%), Positives = 51/67 (76%)
Frame = -3
Query: 428 LKVAVRDTGCKKIPGFSSIQTDDGIVEFYSFDERHSKTEEIYFALRGLTKMLRLSGCRTN 249
LKVA+RDTG +K+PG S I+ +D + EFY FDERHSK++EIY ALRGL K LR SG +
Sbjct: 476 LKVAMRDTGSRKVPGCSLIEVEDEVAEFYCFDERHSKSKEIYGALRGLMKALRSSGYVPD 535
Query: 248 EMELVQE 228
ME+ QE
Sbjct: 536 FMEVGQE 542
>ref|XP_009771244.1| PREDICTED: pentatricopeptide repeat-containing protein At3g29230,
partial [Nicotiana sylvestris]
Length = 659
Score = 81.3 bits (199), Expect = 2e-15
Identities = 41/67 (61%), Positives = 51/67 (76%)
Frame = -3
Query: 428 LKVAVRDTGCKKIPGFSSIQTDDGIVEFYSFDERHSKTEEIYFALRGLTKMLRLSGCRTN 249
LKVA+RDTG +K+PG S I+ +D + EFY FDERHSK++EIY ALRGL K LR SG +
Sbjct: 586 LKVAMRDTGSRKVPGCSLIEVEDEVSEFYCFDERHSKSKEIYGALRGLMKALRSSGYVPD 645
Query: 248 EMELVQE 228
ME+ QE
Sbjct: 646 FMEVGQE 652
>ref|XP_011464107.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
[Fragaria vesca subsp. vesca]
gi|764582280|ref|XP_011464108.1| PREDICTED:
pentatricopeptide repeat-containing protein At1g08070
[Fragaria vesca subsp. vesca]
gi|764582284|ref|XP_011464109.1| PREDICTED:
pentatricopeptide repeat-containing protein At1g08070
[Fragaria vesca subsp. vesca]
Length = 538
Score = 80.5 bits (197), Expect = 4e-15
Identities = 40/65 (61%), Positives = 49/65 (75%)
Frame = -3
Query: 431 RLKVAVRDTGCKKIPGFSSIQTDDGIVEFYSFDERHSKTEEIYFALRGLTKMLRLSGCRT 252
RLKVAVRDTG KK PG SSI+ D G+VEF S D+RH +T++IY L GLTK+LR SG
Sbjct: 470 RLKVAVRDTGYKKFPGVSSIEADHGVVEFCSLDKRHQETQDIYETLEGLTKLLRSSGYVP 529
Query: 251 NEMEL 237
+ +EL
Sbjct: 530 DILEL 534
>dbj|BAT75269.1| hypothetical protein VIGAN_01310300 [Vigna angularis var.
angularis]
Length = 227
Score = 77.4 bits (189), Expect = 9e-15
Identities = 37/65 (56%), Positives = 49/65 (75%)
Frame = -3
Query: 431 RLKVAVRDTGCKKIPGFSSIQTDDGIVEFYSFDERHSKTEEIYFALRGLTKMLRLSGCRT 252
RLK+A+RDTG KK+PG S I +D +VEFYS DERH +TE IY L+GLT +LRL+G
Sbjct: 159 RLKIAMRDTGFKKLPGCSVIGCNDSVVEFYSLDERHPETESIYRTLKGLTTLLRLNGYVP 218
Query: 251 NEMEL 237
N +++
Sbjct: 219 NLVDV 223
>ref|XP_006468706.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070,
chloroplastic isoform X2 [Citrus sinensis]
Length = 538
Score = 79.3 bits (194), Expect = 1e-14
Identities = 37/57 (64%), Positives = 47/57 (82%)
Frame = -3
Query: 431 RLKVAVRDTGCKKIPGFSSIQTDDGIVEFYSFDERHSKTEEIYFALRGLTKMLRLSG 261
R+KVA+RDTG KK+PG SSI+ ++ +V FYS D+RH KTEEIY L+GLTK+LR SG
Sbjct: 470 RIKVAMRDTGFKKLPGCSSIEVNEVVVNFYSLDKRHPKTEEIYETLKGLTKLLRSSG 526
>ref|XP_006468705.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070,
chloroplastic isoform X1 [Citrus sinensis]
Length = 587
Score = 79.3 bits (194), Expect = 1e-14
Identities = 37/57 (64%), Positives = 47/57 (82%)
Frame = -3
Query: 431 RLKVAVRDTGCKKIPGFSSIQTDDGIVEFYSFDERHSKTEEIYFALRGLTKMLRLSG 261
R+KVA+RDTG KK+PG SSI+ ++ +V FYS D+RH KTEEIY L+GLTK+LR SG
Sbjct: 519 RIKVAMRDTGFKKLPGCSSIEVNEVVVNFYSLDKRHPKTEEIYETLKGLTKLLRSSG 575
>ref|XP_006448464.1| hypothetical protein CICLE_v10017589mg [Citrus clementina]
gi|557551075|gb|ESR61704.1| hypothetical protein
CICLE_v10017589mg [Citrus clementina]
Length = 611
Score = 79.3 bits (194), Expect = 1e-14
Identities = 37/57 (64%), Positives = 47/57 (82%)
Frame = -3
Query: 431 RLKVAVRDTGCKKIPGFSSIQTDDGIVEFYSFDERHSKTEEIYFALRGLTKMLRLSG 261
R+KVA+RDTG KK+PG SSI+ ++ +V FYS D+RH KTEEIY L+GLTK+LR SG
Sbjct: 543 RIKVAMRDTGFKKLPGCSSIEVNEVVVNFYSLDKRHPKTEEIYETLKGLTKLLRSSG 599
>ref|XP_012443161.1| PREDICTED: pentatricopeptide repeat-containing protein At3g29230
[Gossypium raimondii] gi|823220913|ref|XP_012443162.1|
PREDICTED: pentatricopeptide repeat-containing protein
At3g29230 [Gossypium raimondii]
gi|763789609|gb|KJB56605.1| hypothetical protein
B456_009G127200 [Gossypium raimondii]
Length = 600
Score = 79.0 bits (193), Expect = 2e-14
Identities = 38/57 (66%), Positives = 46/57 (80%)
Frame = -3
Query: 431 RLKVAVRDTGCKKIPGFSSIQTDDGIVEFYSFDERHSKTEEIYFALRGLTKMLRLSG 261
RLKVA+RDTG KK+PG SSI+ +D +VEFYS DE H +T+EIY ALRGLTK+ R G
Sbjct: 532 RLKVAMRDTGYKKVPGCSSIEVNDCVVEFYSLDESHPETKEIYGALRGLTKLCRSCG 588
>ref|XP_010094637.1| hypothetical protein L484_009882 [Morus notabilis]
gi|587867025|gb|EXB56456.1| hypothetical protein
L484_009882 [Morus notabilis]
Length = 538
Score = 78.2 bits (191), Expect = 3e-14
Identities = 41/65 (63%), Positives = 49/65 (75%)
Frame = -3
Query: 431 RLKVAVRDTGCKKIPGFSSIQTDDGIVEFYSFDERHSKTEEIYFALRGLTKMLRLSGCRT 252
RLKVA+RDTG +K+PG S I+ + +VEFYS DERH +TEEIY AL GLTK+LR S T
Sbjct: 470 RLKVAMRDTGFEKVPGCSLIELNGTVVEFYSLDERHPETEEIYGALTGLTKLLRSSRYVT 529
Query: 251 NEMEL 237
MEL
Sbjct: 530 ALMEL 534
>ref|XP_012573934.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
isoform X2 [Cicer arietinum]
Length = 538
Score = 77.4 bits (189), Expect = 5e-14
Identities = 37/67 (55%), Positives = 49/67 (73%)
Frame = -3
Query: 431 RLKVAVRDTGCKKIPGFSSIQTDDGIVEFYSFDERHSKTEEIYFALRGLTKMLRLSGCRT 252
RLK+A+RDTG +K+PG S I+ +D +VEFYS DERHS+TE IY L+GLT +LR G
Sbjct: 470 RLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHSETESIYRVLKGLTILLRAHGYVP 529
Query: 251 NEMELVQ 231
N ++ Q
Sbjct: 530 NIRDVAQ 536
>ref|XP_011022226.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Populus euphratica]
Length = 538
Score = 77.4 bits (189), Expect = 5e-14
Identities = 40/65 (61%), Positives = 48/65 (73%)
Frame = -3
Query: 431 RLKVAVRDTGCKKIPGFSSIQTDDGIVEFYSFDERHSKTEEIYFALRGLTKMLRLSGCRT 252
RLKVA+RDTG KK+PG S I+ +D +VEFYS DERH + E+IY LR LTK+LR SG
Sbjct: 470 RLKVAMRDTGFKKLPGCSLIEVNDYLVEFYSLDERHPEKEQIYGTLRTLTKLLRSSGYVP 529
Query: 251 NEMEL 237
MEL
Sbjct: 530 GLMEL 534