BLASTX nr result
ID: Rehmannia28_contig00012243
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia28_contig00012243
(298 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011076691.1| PREDICTED: pentatricopeptide repeat-containi... 107 2e-25
ref|XP_012833329.1| PREDICTED: pentatricopeptide repeat-containi... 103 1e-23
emb|CDO99567.1| unnamed protein product [Coffea canephora] 85 4e-19
ref|XP_009366382.1| PREDICTED: pentatricopeptide repeat-containi... 88 3e-18
ref|XP_008457507.1| PREDICTED: pentatricopeptide repeat-containi... 87 4e-18
ref|XP_007023261.1| Tetratricopeptide repeat-like superfamily pr... 87 6e-18
ref|XP_008243240.1| PREDICTED: pentatricopeptide repeat-containi... 86 9e-18
ref|XP_008338990.1| PREDICTED: pentatricopeptide repeat-containi... 86 9e-18
ref|XP_011656468.1| PREDICTED: pentatricopeptide repeat-containi... 85 3e-17
ref|XP_010556367.1| PREDICTED: pentatricopeptide repeat-containi... 84 8e-17
ref|XP_009625939.1| PREDICTED: pentatricopeptide repeat-containi... 83 1e-16
gb|KVI07648.1| Meiotic recombination, Spo11 [Cynara cardunculus ... 82 2e-16
dbj|BAT75269.1| hypothetical protein VIGAN_01310300 [Vigna angul... 80 3e-16
ref|XP_009771244.1| PREDICTED: pentatricopeptide repeat-containi... 82 3e-16
ref|XP_011464107.1| PREDICTED: pentatricopeptide repeat-containi... 81 5e-16
ref|XP_012443161.1| PREDICTED: pentatricopeptide repeat-containi... 81 7e-16
ref|XP_006468706.1| PREDICTED: pentatricopeptide repeat-containi... 80 1e-15
ref|XP_006468705.1| PREDICTED: pentatricopeptide repeat-containi... 80 1e-15
ref|XP_006448464.1| hypothetical protein CICLE_v10017589mg [Citr... 80 1e-15
ref|XP_012573934.1| PREDICTED: pentatricopeptide repeat-containi... 80 2e-15
>ref|XP_011076691.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Sesamum indicum]
Length = 529
Score = 107 bits (268), Expect = 2e-25
Identities = 53/71 (74%), Positives = 61/71 (85%)
Frame = -2
Query: 294 ELARLKVAVRDTGCKKIPGFSSIQTDDGIVEFYSFDERHSKTEEIYFALRGLTKMLRLPG 115
+LARLKVA+RDTG KK+PG+SSI TDDG VEFYSFDERHS+T+EIY ALRGLTK+LRL G
Sbjct: 446 DLARLKVAMRDTGSKKVPGWSSIDTDDGFVEFYSFDERHSRTDEIYCALRGLTKLLRLSG 505
Query: 114 CRTNEMELVQE 82
T+ EL QE
Sbjct: 506 YETDLTELGQE 516
>ref|XP_012833329.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Erythranthe guttata]
Length = 606
Score = 103 bits (256), Expect = 1e-23
Identities = 51/68 (75%), Positives = 57/68 (83%)
Frame = -2
Query: 297 DELARLKVAVRDTGCKKIPGFSSIQTDDGIVEFYSFDERHSKTEEIYFALRGLTKMLRLP 118
++LARLKVA+RDTG KK+PG SSIQTDD IVEFY FDERH KTEEIY ALRGLTK+LRL
Sbjct: 536 EDLARLKVAMRDTGSKKVPGLSSIQTDDEIVEFYCFDERHLKTEEIYCALRGLTKLLRLC 595
Query: 117 GCRTNEME 94
G E+E
Sbjct: 596 GADPTELE 603
>emb|CDO99567.1| unnamed protein product [Coffea canephora]
Length = 152
Score = 85.1 bits (209), Expect = 4e-19
Identities = 42/70 (60%), Positives = 54/70 (77%)
Frame = -2
Query: 294 ELARLKVAVRDTGCKKIPGFSSIQTDDGIVEFYSFDERHSKTEEIYFALRGLTKMLRLPG 115
++ARLKVA RDTG +K+PG SS++ +DG+VEFYSFDERHS +EEIY ALRGL +L G
Sbjct: 81 DVARLKVAERDTGSRKLPGCSSVEVEDGVVEFYSFDERHSSSEEIYDALRGLMNVLLSDG 140
Query: 114 CRTNEMELVQ 85
+ +EL Q
Sbjct: 141 YVPDFVELGQ 150
>ref|XP_009366382.1| PREDICTED: pentatricopeptide repeat-containing protein At3g29230
[Pyrus x bretschneideri]
gi|694380519|ref|XP_009366383.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g29230
[Pyrus x bretschneideri]
gi|694380521|ref|XP_009366384.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g29230
[Pyrus x bretschneideri]
gi|694380523|ref|XP_009366385.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g29230
[Pyrus x bretschneideri]
gi|694380526|ref|XP_009366386.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g29230
[Pyrus x bretschneideri]
gi|694380528|ref|XP_009366387.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g29230
[Pyrus x bretschneideri]
Length = 613
Score = 87.8 bits (216), Expect = 3e-18
Identities = 44/70 (62%), Positives = 54/70 (77%)
Frame = -2
Query: 294 ELARLKVAVRDTGCKKIPGFSSIQTDDGIVEFYSFDERHSKTEEIYFALRGLTKMLRLPG 115
++ARLKV++RDTG KK PG S I+ +DG+VEFYS D+RH KTEEIY AL GLTK+LR G
Sbjct: 539 DVARLKVSMRDTGHKKFPGVSLIEVNDGVVEFYSLDKRHPKTEEIYGALMGLTKLLRSSG 598
Query: 114 CRTNEMELVQ 85
N +EL Q
Sbjct: 599 YVPNILELGQ 608
>ref|XP_008457507.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Cucumis melo]
Length = 593
Score = 87.4 bits (215), Expect = 4e-18
Identities = 41/70 (58%), Positives = 54/70 (77%)
Frame = -2
Query: 294 ELARLKVAVRDTGCKKIPGFSSIQTDDGIVEFYSFDERHSKTEEIYFALRGLTKMLRLPG 115
++ARLK+ +RDTGCKK+PG S I+ +D +VEFYS DERHS+++EIY L+GL K+LR G
Sbjct: 522 DVARLKILMRDTGCKKLPGCSLIEVNDSVVEFYSLDERHSQSQEIYGVLKGLMKLLRSFG 581
Query: 114 CRTNEMELVQ 85
N MEL Q
Sbjct: 582 YEPNIMELQQ 591
>ref|XP_007023261.1| Tetratricopeptide repeat-like superfamily protein [Theobroma cacao]
gi|508778627|gb|EOY25883.1| Tetratricopeptide
repeat-like superfamily protein [Theobroma cacao]
Length = 539
Score = 86.7 bits (213), Expect = 6e-18
Identities = 44/70 (62%), Positives = 55/70 (78%)
Frame = -2
Query: 294 ELARLKVAVRDTGCKKIPGFSSIQTDDGIVEFYSFDERHSKTEEIYFALRGLTKMLRLPG 115
++ARLKVA+RDTG KK+PG S I+ +DG+VEFYS DERH +T+EIY ALRGLTK+LR G
Sbjct: 468 DVARLKVAMRDTGRKKLPGCSLIEVNDGVVEFYSLDERHPETKEIYGALRGLTKLLRSCG 527
Query: 114 CRTNEMELVQ 85
+ EL Q
Sbjct: 528 YIPDLQELGQ 537
>ref|XP_008243240.1| PREDICTED: pentatricopeptide repeat-containing protein At3g29230
[Prunus mume]
Length = 538
Score = 86.3 bits (212), Expect = 9e-18
Identities = 40/60 (66%), Positives = 50/60 (83%)
Frame = -2
Query: 294 ELARLKVAVRDTGCKKIPGFSSIQTDDGIVEFYSFDERHSKTEEIYFALRGLTKMLRLPG 115
++ARLKVA+RDTG KK+PG S I+ +DG+VEFYS DERH +TEEIY LRGLTK+L+ G
Sbjct: 467 DVARLKVAMRDTGYKKVPGVSFIEANDGVVEFYSLDERHPETEEIYGVLRGLTKLLKSSG 526
>ref|XP_008338990.1| PREDICTED: pentatricopeptide repeat-containing protein At3g29230
[Malus domestica]
Length = 613
Score = 86.3 bits (212), Expect = 9e-18
Identities = 43/70 (61%), Positives = 54/70 (77%)
Frame = -2
Query: 294 ELARLKVAVRDTGCKKIPGFSSIQTDDGIVEFYSFDERHSKTEEIYFALRGLTKMLRLPG 115
++ARLKV++RDTG KK PG S I+ +DG+VEFYS D+RH +TEEIY AL GLTK+LR G
Sbjct: 539 DVARLKVSMRDTGHKKFPGVSLIEVNDGVVEFYSLDKRHPETEEIYGALMGLTKLLRSSG 598
Query: 114 CRTNEMELVQ 85
N +EL Q
Sbjct: 599 YVPNILELGQ 608
>ref|XP_011656468.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|700190688|gb|KGN45892.1| hypothetical protein
Csa_6G017080 [Cucumis sativus]
Length = 538
Score = 84.7 bits (208), Expect = 3e-17
Identities = 40/70 (57%), Positives = 54/70 (77%)
Frame = -2
Query: 294 ELARLKVAVRDTGCKKIPGFSSIQTDDGIVEFYSFDERHSKTEEIYFALRGLTKMLRLPG 115
++ARLK+ +RDTG KK+PG S I+ +D +VEFYS DERHS+++EIY L+GL K+LR G
Sbjct: 467 DVARLKILMRDTGSKKLPGCSLIEVNDSVVEFYSLDERHSQSKEIYGVLKGLMKLLRSFG 526
Query: 114 CRTNEMELVQ 85
N MEL+Q
Sbjct: 527 YEPNMMELLQ 536
>ref|XP_010556367.1| PREDICTED: pentatricopeptide repeat-containing protein At3g29230
[Tarenaya hassleriana]
Length = 518
Score = 83.6 bits (205), Expect = 8e-17
Identities = 40/72 (55%), Positives = 55/72 (76%), Gaps = 2/72 (2%)
Frame = -2
Query: 297 DELARLKVAVRDTGCKKIPGFSSIQTDDGIVEFYSFDERHSKTEEIYFALRGLTKMLRLP 118
+++ARLK+A+RDTG KK+PG S I+TDDG+VEFYS E+H ++EEIY L+GL K+LR P
Sbjct: 446 EDVARLKLAMRDTGVKKVPGISLIETDDGLVEFYSSGEKHPQSEEIYKVLKGLMKLLRTP 505
Query: 117 GC--RTNEMELV 88
E+E+V
Sbjct: 506 AFVPEVEEIEIV 517
>ref|XP_009625939.1| PREDICTED: pentatricopeptide repeat-containing protein At3g29230
[Nicotiana tomentosiformis]
gi|697098282|ref|XP_009625943.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g29230
[Nicotiana tomentosiformis]
gi|697098284|ref|XP_009625945.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g29230
[Nicotiana tomentosiformis]
gi|697098286|ref|XP_009625950.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g29230
[Nicotiana tomentosiformis]
gi|697098288|ref|XP_009625956.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g29230
[Nicotiana tomentosiformis]
Length = 549
Score = 82.8 bits (203), Expect = 1e-16
Identities = 41/71 (57%), Positives = 53/71 (74%)
Frame = -2
Query: 294 ELARLKVAVRDTGCKKIPGFSSIQTDDGIVEFYSFDERHSKTEEIYFALRGLTKMLRLPG 115
++A LKVA+RDTG +K+PG S I+ +D + EFY FDERHSK++EIY ALRGL K LR G
Sbjct: 472 DVAELKVAMRDTGSRKVPGCSLIEVEDEVAEFYCFDERHSKSKEIYGALRGLMKALRSSG 531
Query: 114 CRTNEMELVQE 82
+ ME+ QE
Sbjct: 532 YVPDFMEVGQE 542
>gb|KVI07648.1| Meiotic recombination, Spo11 [Cynara cardunculus var. scolymus]
Length = 841
Score = 82.4 bits (202), Expect = 2e-16
Identities = 38/55 (69%), Positives = 47/55 (85%)
Frame = -2
Query: 297 DELARLKVAVRDTGCKKIPGFSSIQTDDGIVEFYSFDERHSKTEEIYFALRGLTK 133
D++AR KVA+R+TG KK+PG S I+ DDG+VEFY+FDERH+KTEEIY LRGL K
Sbjct: 781 DDVARSKVAMRNTGGKKLPGCSLIEVDDGVVEFYAFDERHAKTEEIYTVLRGLMK 835
>dbj|BAT75269.1| hypothetical protein VIGAN_01310300 [Vigna angularis var.
angularis]
Length = 227
Score = 79.7 bits (195), Expect = 3e-16
Identities = 38/69 (55%), Positives = 52/69 (75%)
Frame = -2
Query: 297 DELARLKVAVRDTGCKKIPGFSSIQTDDGIVEFYSFDERHSKTEEIYFALRGLTKMLRLP 118
+++ARLK+A+RDTG KK+PG S I +D +VEFYS DERH +TE IY L+GLT +LRL
Sbjct: 155 EDVARLKIAMRDTGFKKLPGCSVIGCNDSVVEFYSLDERHPETESIYRTLKGLTTLLRLN 214
Query: 117 GCRTNEMEL 91
G N +++
Sbjct: 215 GYVPNLVDV 223
>ref|XP_009771244.1| PREDICTED: pentatricopeptide repeat-containing protein At3g29230,
partial [Nicotiana sylvestris]
Length = 659
Score = 82.0 bits (201), Expect = 3e-16
Identities = 41/71 (57%), Positives = 53/71 (74%)
Frame = -2
Query: 294 ELARLKVAVRDTGCKKIPGFSSIQTDDGIVEFYSFDERHSKTEEIYFALRGLTKMLRLPG 115
++A LKVA+RDTG +K+PG S I+ +D + EFY FDERHSK++EIY ALRGL K LR G
Sbjct: 582 DVAELKVAMRDTGSRKVPGCSLIEVEDEVSEFYCFDERHSKSKEIYGALRGLMKALRSSG 641
Query: 114 CRTNEMELVQE 82
+ ME+ QE
Sbjct: 642 YVPDFMEVGQE 652
>ref|XP_011464107.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
[Fragaria vesca subsp. vesca]
gi|764582280|ref|XP_011464108.1| PREDICTED:
pentatricopeptide repeat-containing protein At1g08070
[Fragaria vesca subsp. vesca]
gi|764582284|ref|XP_011464109.1| PREDICTED:
pentatricopeptide repeat-containing protein At1g08070
[Fragaria vesca subsp. vesca]
Length = 538
Score = 81.3 bits (199), Expect = 5e-16
Identities = 40/68 (58%), Positives = 51/68 (75%)
Frame = -2
Query: 294 ELARLKVAVRDTGCKKIPGFSSIQTDDGIVEFYSFDERHSKTEEIYFALRGLTKMLRLPG 115
++ARLKVAVRDTG KK PG SSI+ D G+VEF S D+RH +T++IY L GLTK+LR G
Sbjct: 467 DVARLKVAVRDTGYKKFPGVSSIEADHGVVEFCSLDKRHQETQDIYETLEGLTKLLRSSG 526
Query: 114 CRTNEMEL 91
+ +EL
Sbjct: 527 YVPDILEL 534
>ref|XP_012443161.1| PREDICTED: pentatricopeptide repeat-containing protein At3g29230
[Gossypium raimondii] gi|823220913|ref|XP_012443162.1|
PREDICTED: pentatricopeptide repeat-containing protein
At3g29230 [Gossypium raimondii]
gi|763789609|gb|KJB56605.1| hypothetical protein
B456_009G127200 [Gossypium raimondii]
Length = 600
Score = 80.9 bits (198), Expect = 7e-16
Identities = 39/60 (65%), Positives = 49/60 (81%)
Frame = -2
Query: 294 ELARLKVAVRDTGCKKIPGFSSIQTDDGIVEFYSFDERHSKTEEIYFALRGLTKMLRLPG 115
++ARLKVA+RDTG KK+PG SSI+ +D +VEFYS DE H +T+EIY ALRGLTK+ R G
Sbjct: 529 DVARLKVAMRDTGYKKVPGCSSIEVNDCVVEFYSLDESHPETKEIYGALRGLTKLCRSCG 588
>ref|XP_006468706.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070,
chloroplastic isoform X2 [Citrus sinensis]
Length = 538
Score = 80.1 bits (196), Expect = 1e-15
Identities = 37/60 (61%), Positives = 49/60 (81%)
Frame = -2
Query: 294 ELARLKVAVRDTGCKKIPGFSSIQTDDGIVEFYSFDERHSKTEEIYFALRGLTKMLRLPG 115
++AR+KVA+RDTG KK+PG SSI+ ++ +V FYS D+RH KTEEIY L+GLTK+LR G
Sbjct: 467 DVARIKVAMRDTGFKKLPGCSSIEVNEVVVNFYSLDKRHPKTEEIYETLKGLTKLLRSSG 526
>ref|XP_006468705.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070,
chloroplastic isoform X1 [Citrus sinensis]
Length = 587
Score = 80.1 bits (196), Expect = 1e-15
Identities = 37/60 (61%), Positives = 49/60 (81%)
Frame = -2
Query: 294 ELARLKVAVRDTGCKKIPGFSSIQTDDGIVEFYSFDERHSKTEEIYFALRGLTKMLRLPG 115
++AR+KVA+RDTG KK+PG SSI+ ++ +V FYS D+RH KTEEIY L+GLTK+LR G
Sbjct: 516 DVARIKVAMRDTGFKKLPGCSSIEVNEVVVNFYSLDKRHPKTEEIYETLKGLTKLLRSSG 575
>ref|XP_006448464.1| hypothetical protein CICLE_v10017589mg [Citrus clementina]
gi|557551075|gb|ESR61704.1| hypothetical protein
CICLE_v10017589mg [Citrus clementina]
Length = 611
Score = 80.1 bits (196), Expect = 1e-15
Identities = 37/60 (61%), Positives = 49/60 (81%)
Frame = -2
Query: 294 ELARLKVAVRDTGCKKIPGFSSIQTDDGIVEFYSFDERHSKTEEIYFALRGLTKMLRLPG 115
++AR+KVA+RDTG KK+PG SSI+ ++ +V FYS D+RH KTEEIY L+GLTK+LR G
Sbjct: 540 DVARIKVAMRDTGFKKLPGCSSIEVNEVVVNFYSLDKRHPKTEEIYETLKGLTKLLRSSG 599
>ref|XP_012573934.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
isoform X2 [Cicer arietinum]
Length = 538
Score = 79.7 bits (195), Expect = 2e-15
Identities = 38/70 (54%), Positives = 52/70 (74%)
Frame = -2
Query: 294 ELARLKVAVRDTGCKKIPGFSSIQTDDGIVEFYSFDERHSKTEEIYFALRGLTKMLRLPG 115
++ARLK+A+RDTG +K+PG S I+ +D +VEFYS DERHS+TE IY L+GLT +LR G
Sbjct: 467 DVARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHSETESIYRVLKGLTILLRAHG 526
Query: 114 CRTNEMELVQ 85
N ++ Q
Sbjct: 527 YVPNIRDVAQ 536