BLASTX nr result

ID: Rehmannia28_contig00011925 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00011925
         (1606 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011097709.1| PREDICTED: probable RNA polymerase II transc...    64   3e-07
ref|XP_011097708.1| PREDICTED: probable RNA polymerase II transc...    64   3e-07

>ref|XP_011097709.1| PREDICTED: probable RNA polymerase II transcription factor B subunit
            1-1 isoform X2 [Sesamum indicum]
          Length = 592

 Score = 63.9 bits (154), Expect = 3e-07
 Identities = 34/60 (56%), Positives = 41/60 (68%)
 Frame = -3

Query: 1379 FEGAAIPDNEVCVNL*TTNTIAFHAEAGRAMHEVSVAPLSNEQLTRVETERRIKLLLENS 1200
            FE  +  D +VC      N IAFHAEAGR + + S  P++NEQL+R ETERRIKLL ENS
Sbjct: 80   FEFDSFADRDVCREF-VANAIAFHAEAGRVVPDKSAPPVNNEQLSREETERRIKLLQENS 138


>ref|XP_011097708.1| PREDICTED: probable RNA polymerase II transcription factor B subunit
            1-1 isoform X1 [Sesamum indicum]
          Length = 600

 Score = 63.9 bits (154), Expect = 3e-07
 Identities = 34/60 (56%), Positives = 41/60 (68%)
 Frame = -3

Query: 1379 FEGAAIPDNEVCVNL*TTNTIAFHAEAGRAMHEVSVAPLSNEQLTRVETERRIKLLLENS 1200
            FE  +  D +VC      N IAFHAEAGR + + S  P++NEQL+R ETERRIKLL ENS
Sbjct: 80   FEFDSFADRDVCREF-VANAIAFHAEAGRVVPDKSAPPVNNEQLSREETERRIKLLQENS 138


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