BLASTX nr result
ID: Rehmannia28_contig00011880
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia28_contig00011880
(973 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CDP17738.1| unnamed protein product [Coffea canephora] 171 2e-44
ref|XP_012070606.1| PREDICTED: uncharacterized protein LOC105632... 158 1e-41
gb|KYP39598.1| Retrovirus-related Pol polyprotein from transposo... 141 7e-36
gb|AAR13295.1| retrovirus-related pol polyprotein [Phaseolus vul... 119 7e-28
gb|KYP67484.1| Retrovirus-related Pol polyprotein from transposo... 121 3e-27
ref|XP_015163237.1| PREDICTED: uncharacterized protein LOC107060... 114 1e-26
gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vu... 112 6e-24
emb|CDN96898.1| putative Ty-1 copia retrotransposon [Phaseolus v... 110 2e-23
gb|KYP77941.1| Retrovirus-related Pol polyprotein from transposo... 66 7e-09
gb|KYP62517.1| Retrovirus-related Pol polyprotein from transposo... 65 1e-08
gb|KYP36341.1| Retrovirus-related Pol polyprotein from transposo... 65 1e-08
gb|KQL05447.1| hypothetical protein SETIT_004631mg [Setaria ital... 61 2e-08
emb|CAN76612.1| hypothetical protein VITISV_040104 [Vitis vinifera] 62 2e-08
ref|XP_011000402.1| PREDICTED: uncharacterized protein LOC105107... 65 2e-08
emb|CAE04897.3| OSJNBa0042I15.19 [Oryza sativa Japonica Group] 64 8e-08
ref|XP_015068799.1| PREDICTED: uncharacterized protein LOC107013... 62 1e-07
ref|XP_008796700.1| PREDICTED: uncharacterized protein LOC103712... 63 2e-07
emb|CAN60569.1| hypothetical protein VITISV_000226 [Vitis vinifera] 57 6e-07
gb|KYP53542.1| Retrovirus-related Pol polyprotein from transposo... 58 1e-06
gb|ABD63151.1| hypothetical protein 20.t00003 [Asparagus officin... 60 1e-06
>emb|CDP17738.1| unnamed protein product [Coffea canephora]
Length = 798
Score = 171 bits (434), Expect = 2e-44
Identities = 83/116 (71%), Positives = 95/116 (81%)
Frame = +2
Query: 626 RMLVPNIRISVETFDGTGHFGMWQGEVLDCLFQQGLDIAIXXXXXXXXXXXXXXTINRLA 805
R+ + +++++VETFDGTGHFGMWQGEV+D LFQQGLDIAI TINRLA
Sbjct: 27 RIPMSSLKVAVETFDGTGHFGMWQGEVMDSLFQQGLDIAIEEKKSDDIEEKEWSTINRLA 86
Query: 806 CGTIRSCLSREQKYAFKNENSAYKLWKALEDKFLKKSGQNKLLMKKRLFRFEYRSG 973
CGTIRSCLS+EQKYAFKNE SA+KLWKALE KFLKKSGQNKLLMKK LFRF+Y+ G
Sbjct: 87 CGTIRSCLSKEQKYAFKNETSAWKLWKALEGKFLKKSGQNKLLMKKILFRFDYQPG 142
>ref|XP_012070606.1| PREDICTED: uncharacterized protein LOC105632772 [Jatropha curcas]
Length = 411
Score = 158 bits (399), Expect = 1e-41
Identities = 77/117 (65%), Positives = 86/117 (73%)
Frame = +2
Query: 623 GRMLVPNIRISVETFDGTGHFGMWQGEVLDCLFQQGLDIAIXXXXXXXXXXXXXXTINRL 802
GR +V N R +VE FDGTGHFG+WQ E+LD LFQQGLD+AI TINRL
Sbjct: 17 GRNVVSNARFTVEIFDGTGHFGIWQSELLDALFQQGLDVAIEEEKPTKMEESEWRTINRL 76
Query: 803 ACGTIRSCLSREQKYAFKNENSAYKLWKALEDKFLKKSGQNKLLMKKRLFRFEYRSG 973
ACGTIRSCLSREQKY F E SA KLWKALE+KFLKK+ QNKL MK +L+RF Y SG
Sbjct: 77 ACGTIRSCLSREQKYVFSKETSANKLWKALEEKFLKKNNQNKLFMKNKLYRFNYVSG 133
>gb|KYP39598.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 350
Score = 141 bits (356), Expect = 7e-36
Identities = 73/106 (68%), Positives = 76/106 (71%)
Frame = +2
Query: 656 VETFDGTGHFGMWQGEVLDCLFQQGLDIAIXXXXXXXXXXXXXXTINRLACGTIRSCLSR 835
VE FDG+GHFGMWQ EVLD LFQQGLDI I T+NRLACGTIRSCLSR
Sbjct: 2 VEIFDGSGHFGMWQSEVLDALFQQGLDITIEGKKPESMGEEDWKTLNRLACGTIRSCLSR 61
Query: 836 EQKYAFKNENSAYKLWKALEDKFLKKSGQNKLLMKKRLFRFEYRSG 973
EQKYAF E SA KL LE+KFLKKS QNKL MKKRLFRF Y G
Sbjct: 62 EQKYAFCKETSASKLMTELEEKFLKKSSQNKLHMKKRLFRFTYIPG 107
>gb|AAR13295.1| retrovirus-related pol polyprotein [Phaseolus vulgaris]
Length = 324
Score = 119 bits (299), Expect = 7e-28
Identities = 60/83 (72%), Positives = 64/83 (77%)
Frame = +2
Query: 725 QGLDIAIXXXXXXXXXXXXXXTINRLACGTIRSCLSREQKYAFKNENSAYKLWKALEDKF 904
+GLDIAI INRLACGTIRSCLSREQKY KNE SA+KLWKALEDKF
Sbjct: 13 KGLDIAIEGEKPKEVEEKDWSIINRLACGTIRSCLSREQKYVVKNETSAHKLWKALEDKF 72
Query: 905 LKKSGQNKLLMKKRLFRFEYRSG 973
LKKSGQNKLLMKKRLFRF+Y+ G
Sbjct: 73 LKKSGQNKLLMKKRLFRFDYQQG 95
>gb|KYP67484.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 561
Score = 121 bits (303), Expect = 3e-27
Identities = 64/95 (67%), Positives = 66/95 (69%)
Frame = +2
Query: 689 MWQGEVLDCLFQQGLDIAIXXXXXXXXXXXXXXTINRLACGTIRSCLSREQKYAFKNENS 868
MWQ EVLD LFQQGLDI I T+NRLACGTIRSCLSREQKYAF E S
Sbjct: 1 MWQSEVLDALFQQGLDITIEGKKPESMGEEDWKTLNRLACGTIRSCLSREQKYAFCKETS 60
Query: 869 AYKLWKALEDKFLKKSGQNKLLMKKRLFRFEYRSG 973
A KL LE+KFLKKS QNKL MKKRLFRF Y G
Sbjct: 61 ASKLMTELEEKFLKKSSQNKLHMKKRLFRFTYIPG 95
>ref|XP_015163237.1| PREDICTED: uncharacterized protein LOC107060176 [Solanum tuberosum]
Length = 239
Score = 114 bits (285), Expect = 1e-26
Identities = 59/95 (62%), Positives = 65/95 (68%)
Frame = +2
Query: 689 MWQGEVLDCLFQQGLDIAIXXXXXXXXXXXXXXTINRLACGTIRSCLSREQKYAFKNENS 868
MWQGEVLD LFQQGLDIAI TIN +ACGTIRS L+REQKY + E S
Sbjct: 1 MWQGEVLDVLFQQGLDIAIEEKKLDSVGEEDWKTINCVACGTIRSYLAREQKYPYTKETS 60
Query: 869 AYKLWKALEDKFLKKSGQNKLLMKKRLFRFEYRSG 973
A KLW +LE KFLKK+ QNKL MK+RL RF Y G
Sbjct: 61 ANKLWNSLEGKFLKKNSQNKLYMKRRLLRFTYIPG 95
>gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris]
Length = 867
Score = 112 bits (280), Expect = 6e-24
Identities = 57/76 (75%), Positives = 58/76 (76%)
Frame = +2
Query: 689 MWQGEVLDCLFQQGLDIAIXXXXXXXXXXXXXXTINRLACGTIRSCLSREQKYAFKNENS 868
MWQGEVLD LFQQGLDIAI INRLACGTIRSCLSREQKYA KNE S
Sbjct: 1 MWQGEVLDSLFQQGLDIAIEGEKPKEVEEKDWSIINRLACGTIRSCLSREQKYAVKNETS 60
Query: 869 AYKLWKALEDKFLKKS 916
A+KLWKALEDKFLKKS
Sbjct: 61 AHKLWKALEDKFLKKS 76
>emb|CDN96898.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris]
Length = 813
Score = 110 bits (276), Expect = 2e-23
Identities = 56/76 (73%), Positives = 57/76 (75%)
Frame = +2
Query: 689 MWQGEVLDCLFQQGLDIAIXXXXXXXXXXXXXXTINRLACGTIRSCLSREQKYAFKNENS 868
MWQGEVLD LFQQGLD AI INRLACGTIRSCLSREQKYA KNE S
Sbjct: 1 MWQGEVLDSLFQQGLDFAIEGEKPKEVEEKDWSIINRLACGTIRSCLSREQKYAVKNETS 60
Query: 869 AYKLWKALEDKFLKKS 916
A+KLWKALEDKFLKKS
Sbjct: 61 AHKLWKALEDKFLKKS 76
>gb|KYP77941.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 270
Score = 65.9 bits (159), Expect = 7e-09
Identities = 39/111 (35%), Positives = 53/111 (47%), Gaps = 1/111 (0%)
Frame = +2
Query: 644 IRISVETFDGTGHFGMWQGEVLDCLFQQGLDIAIXXXXXXXXXXXXXX-TINRLACGTIR 820
++ V FDG F +WQ + D L QQGLD+A+ TI + A TIR
Sbjct: 4 LKFEVPLFDGRTDFTLWQCTIQDYLVQQGLDLALQDEKKPSEIKESDWSTIQKKAVSTIR 63
Query: 821 SCLSREQKYAFKNENSAYKLWKALEDKFLKKSGQNKLLMKKRLFRFEYRSG 973
L+ + K E S KLW LE KF K+ N+L+MK L+ + G
Sbjct: 64 LALAPQIKVTVLKETSPKKLWDTLESKFASKTLTNRLMMKMDLYSLKMEEG 114
>gb|KYP62517.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 267
Score = 65.5 bits (158), Expect = 1e-08
Identities = 37/103 (35%), Positives = 50/103 (48%)
Frame = +2
Query: 644 IRISVETFDGTGHFGMWQGEVLDCLFQQGLDIAIXXXXXXXXXXXXXXTINRLACGTIRS 823
+++ V FDG F +WQ + D L QQGLD A+ TI + A TIR
Sbjct: 4 MKLDVPLFDGRIDFSLWQCTIQDYLVQQGLDCALEEEKPREMKDSEWSTIQKKAVSTIRL 63
Query: 824 CLSREQKYAFKNENSAYKLWKALEDKFLKKSGQNKLLMKKRLF 952
L+ + K E S KLW LE KF + N+L+MK L+
Sbjct: 64 ALAPQIKVTVLKETSPRKLWNLLESKFASTTLTNRLMMKMDLY 106
>gb|KYP36341.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan] gi|1012341223|gb|KYP52429.1|
Retrovirus-related Pol polyprotein from transposon TNT
1-94 [Cajanus cajan]
Length = 267
Score = 65.1 bits (157), Expect = 1e-08
Identities = 37/103 (35%), Positives = 50/103 (48%)
Frame = +2
Query: 644 IRISVETFDGTGHFGMWQGEVLDCLFQQGLDIAIXXXXXXXXXXXXXXTINRLACGTIRS 823
+++ V FDG F +WQ + D L QQGLD A+ TI + A TIR
Sbjct: 4 MKLDVPLFDGRIDFSLWQCTIQDYLVQQGLDCALEEEKPCEMKDSEWSTIQKKAVSTIRL 63
Query: 824 CLSREQKYAFKNENSAYKLWKALEDKFLKKSGQNKLLMKKRLF 952
L+ + K E S KLW LE KF + N+L+MK L+
Sbjct: 64 ALAPQIKVTVLKETSPRKLWNLLEGKFASTTLTNRLMMKMDLY 106
>gb|KQL05447.1| hypothetical protein SETIT_004631mg [Setaria italica]
Length = 98
Score = 60.8 bits (146), Expect = 2e-08
Identities = 35/91 (38%), Positives = 47/91 (51%)
Frame = +2
Query: 656 VETFDGTGHFGMWQGEVLDCLFQQGLDIAIXXXXXXXXXXXXXXTINRLACGTIRSCLSR 835
V+ FDG G+F +W+ +D L QQ L A+ + A TIR LS
Sbjct: 8 VDKFDGKGNFNVWKCVAIDVLVQQWLIDALERIKSESTTAEEWKVMEWKAASTIRLYLSD 67
Query: 836 EQKYAFKNENSAYKLWKALEDKFLKKSGQNK 928
E KY+ ENS+ KLWK LED ++ KS N+
Sbjct: 68 EVKYSVIKENSSKKLWKRLEDLYMAKSLTNR 98
>emb|CAN76612.1| hypothetical protein VITISV_040104 [Vitis vinifera]
Length = 127
Score = 61.6 bits (148), Expect = 2e-08
Identities = 33/113 (29%), Positives = 53/113 (46%)
Frame = +2
Query: 635 VPNIRISVETFDGTGHFGMWQGEVLDCLFQQGLDIAIXXXXXXXXXXXXXXTINRLACGT 814
+ + + V FDG G+F +WQ V D L QQG+ A+ + T
Sbjct: 4 ISSAKFDVVKFDGFGNFDLWQRRVKDLLVQQGMVKALYGKQPEGMNNMDWKDLEVKVAAT 63
Query: 815 IRSCLSREQKYAFKNENSAYKLWKALEDKFLKKSGQNKLLMKKRLFRFEYRSG 973
IR CL+ + Y +E S +W LE +++ K NKL +K++L+ + G
Sbjct: 64 IRLCLADDVMYHVMDEESPTAIWLKLESQYMSKLLTNKLYLKQKLYGLKMAEG 116
>ref|XP_011000402.1| PREDICTED: uncharacterized protein LOC105107971 [Populus
euphratica]
Length = 450
Score = 65.5 bits (158), Expect = 2e-08
Identities = 29/52 (55%), Positives = 40/52 (76%)
Frame = +2
Query: 818 RSCLSREQKYAFKNENSAYKLWKALEDKFLKKSGQNKLLMKKRLFRFEYRSG 973
RS + ++QKYAF +NSA +LW+ALEDKF+KKS N L +KKR F F+++ G
Sbjct: 30 RSLMGKDQKYAFSEQNSAKELWQALEDKFMKKSIDNCLYLKKRNFHFQHKKG 81
>emb|CAE04897.3| OSJNBa0042I15.19 [Oryza sativa Japonica Group]
Length = 478
Score = 63.9 bits (154), Expect = 8e-08
Identities = 35/117 (29%), Positives = 57/117 (48%)
Frame = +2
Query: 623 GRMLVPNIRISVETFDGTGHFGMWQGEVLDCLFQQGLDIAIXXXXXXXXXXXXXXTINRL 802
G++ ++ + FDG G+FG+WQ V D L QQ + A+ +
Sbjct: 81 GKLAPTCMKFDLVKFDGFGNFGLWQTRVKDLLAQQEVSKALKGVKPAKMEDDDCEEMQLQ 140
Query: 803 ACGTIRSCLSREQKYAFKNENSAYKLWKALEDKFLKKSGQNKLLMKKRLFRFEYRSG 973
A TIR CLS + Y E S +W+ LE +F+ K+ NK +K++L+ + + G
Sbjct: 141 AAATIRRCLSDQIMYHVMEETSPKIIWEKLEAQFMSKTLTNKRYLKQKLYGLKMQEG 197
>ref|XP_015068799.1| PREDICTED: uncharacterized protein LOC107013393 [Solanum pennellii]
Length = 296
Score = 62.4 bits (150), Expect = 1e-07
Identities = 30/58 (51%), Positives = 37/58 (63%)
Frame = +2
Query: 632 LVPNIRISVETFDGTGHFGMWQGEVLDCLFQQGLDIAIXXXXXXXXXXXXXXTINRLA 805
+V N + +VETFDG+GHFGMW+GEVLD LFQQ L IAI + N+LA
Sbjct: 27 IVSNAKFAVETFDGSGHFGMWKGEVLDVLFQQSLAIAIEEKKLDSHNDDHITSFNKLA 84
>ref|XP_008796700.1| PREDICTED: uncharacterized protein LOC103712082 [Phoenix
dactylifera]
Length = 2199
Score = 63.2 bits (152), Expect = 2e-07
Identities = 36/115 (31%), Positives = 55/115 (47%)
Frame = +2
Query: 629 MLVPNIRISVETFDGTGHFGMWQGEVLDCLFQQGLDIAIXXXXXXXXXXXXXXTINRLAC 808
M N++ E FDG G+F +WQ V D L QQ + + + +A
Sbjct: 382 MASSNLKADFEKFDGKGNFILWQQRVKDLLIQQRIYKVLVKKRPKKISIEDWEELEEIAF 441
Query: 809 GTIRSCLSREQKYAFKNENSAYKLWKALEDKFLKKSGQNKLLMKKRLFRFEYRSG 973
TIR CL+ + E +A +LW+ LE+ ++ KS NKL +KK+L+ G
Sbjct: 442 STIRMCLADQVLPEICLETTAKELWERLENTYMGKSMTNKLWLKKQLYSLRMPEG 496
>emb|CAN60569.1| hypothetical protein VITISV_000226 [Vitis vinifera]
Length = 105
Score = 57.0 bits (136), Expect = 6e-07
Identities = 31/102 (30%), Positives = 48/102 (47%)
Frame = +2
Query: 635 VPNIRISVETFDGTGHFGMWQGEVLDCLFQQGLDIAIXXXXXXXXXXXXXXTINRLACGT 814
+ + + V F+G+G+FG+WQ V D L QQG+ A+ + T
Sbjct: 4 ISSAKFDVVKFNGSGNFGLWQRRVKDLLVQQGMVKALYEKQPEGMDDMDWKDLEAKVEAT 63
Query: 815 IRSCLSREQKYAFKNENSAYKLWKALEDKFLKKSGQNKLLMK 940
IR CL + Y +E S +W LE +++ S NKL +K
Sbjct: 64 IRLCLVDDVMYHVMDEESPTTIWLKLESRYMSMSLTNKLYLK 105
>gb|KYP53542.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 197
Score = 58.2 bits (139), Expect = 1e-06
Identities = 35/109 (32%), Positives = 50/109 (45%)
Frame = +2
Query: 647 RISVETFDGTGHFGMWQGEVLDCLFQQGLDIAIXXXXXXXXXXXXXXTINRLACGTIRSC 826
+ + FDG +F +WQ V D L QQGLD A+ I + A TIR
Sbjct: 7 KFEIPLFDGKTNFMIWQCTVQDILVQQGLDQALEDEKPSNINEREWSQIQKKAVSTIRLA 66
Query: 827 LSREQKYAFKNENSAYKLWKALEDKFLKKSGQNKLLMKKRLFRFEYRSG 973
L+ E K E + LW+ LE + KS N+L +K L++ + G
Sbjct: 67 LTPEIKCNVLKETTPKALWEKLESIYASKSLTNRLCLKMELYQLKMEIG 115
>gb|ABD63151.1| hypothetical protein 20.t00003 [Asparagus officinalis]
Length = 1011
Score = 60.5 bits (145), Expect = 1e-06
Identities = 28/61 (45%), Positives = 39/61 (63%)
Frame = +2
Query: 791 INRLACGTIRSCLSREQKYAFKNENSAYKLWKALEDKFLKKSGQNKLLMKKRLFRFEYRS 970
+NR CG IRSCL +E KY S K+W+ L +K+L KS +N+L + +RLFRF+
Sbjct: 836 MNRNTCGVIRSCLEQELKYDVIGVTSVMKMWEILNNKYLTKSVENRLHLLRRLFRFQMSR 895
Query: 971 G 973
G
Sbjct: 896 G 896