BLASTX nr result
ID: Rehmannia28_contig00011651
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia28_contig00011651
(783 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006470122.2| PREDICTED: uncharacterized protein LOC102629... 142 8e-35
emb|CAD40782.2| OSJNBb0012E08.6 [Oryza sativa Japonica Group] 137 1e-34
gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subc... 140 3e-34
emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group] 140 3e-34
gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-... 140 3e-34
gb|ABD19042.1| reverse transcriptase, partial [Phelipanche bunge... 126 6e-34
gb|ABD18977.1| reverse transcriptase, partial [Orobanche owerinii] 126 9e-34
gb|ABD18955.1| reverse transcriptase, partial [Orobanche crenata] 125 2e-33
gb|ABD18939.1| reverse transcriptase, partial [Orobanche crenata] 125 2e-33
gb|ABD18946.1| reverse transcriptase, partial [Orobanche crenata] 125 2e-33
gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subc... 137 4e-33
gb|ABD19025.1| reverse transcriptase, partial [Orobanche cernua ... 124 5e-33
gb|ABD19090.1| reverse transcriptase, partial [Phelipanche tunet... 124 5e-33
gb|ABD18974.1| reverse transcriptase, partial [Orobanche owerinii] 124 5e-33
gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group... 136 8e-33
emb|CAA20201.1| putative transposable element [Arabidopsis thali... 135 1e-32
gb|ABD19017.1| reverse transcriptase, partial [Orobanche cernua ... 122 3e-32
emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis] 134 4e-32
emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera] 134 4e-32
gb|ABD19010.1| reverse transcriptase, partial [Orobanche cernua ... 122 4e-32
>ref|XP_006470122.2| PREDICTED: uncharacterized protein LOC102629145 [Citrus sinensis]
Length = 1521
Score = 142 bits (357), Expect = 8e-35
Identities = 70/125 (56%), Positives = 94/125 (75%), Gaps = 1/125 (0%)
Frame = -2
Query: 374 FVDSKKPDHVCLLKKSLYGLKQSPRQWNKKFDECMLSLKFKRSSYDHCLYFKE-NASVPI 198
FV S+ PDHVCLLKKSLYGLKQSPRQW +FDE M+S F R ++D C+Y+K+ ++ I
Sbjct: 29 FVSSEYPDHVCLLKKSLYGLKQSPRQWYLRFDEFMISHGFMRCNFDCCVYYKQIDSDHHI 88
Query: 197 FLLIYVDDMLLISSCIKSIEHVKNCLSAKFDMKYLGDANRILGMNIVRDRKNSTVFLNQI 18
+LL+YVDDML+ + IE +K+ L+++FDMK LG A +ILGM I RDR+ T+FL+Q
Sbjct: 89 YLLLYVDDMLIACKVREEIEALKHMLNSEFDMKDLGHAKKILGMEITRDRRKGTMFLSQK 148
Query: 17 SYVEK 3
Y+EK
Sbjct: 149 KYLEK 153
>emb|CAD40782.2| OSJNBb0012E08.6 [Oryza sativa Japonica Group]
Length = 375
Score = 137 bits (344), Expect = 1e-34
Identities = 69/124 (55%), Positives = 88/124 (70%)
Frame = -2
Query: 374 FVDSKKPDHVCLLKKSLYGLKQSPRQWNKKFDECMLSLKFKRSSYDHCLYFKENASVPIF 195
FV K D+VC LK+SLYGLKQSPRQW K+FD MLS FKRS +D C+Y K PI+
Sbjct: 7 FVVPGKEDYVCKLKRSLYGLKQSPRQWYKRFDSFMLSHGFKRSEFDSCVYIKFVNGSPIY 66
Query: 194 LLIYVDDMLLISSCIKSIEHVKNCLSAKFDMKYLGDANRILGMNIVRDRKNSTVFLNQIS 15
LL+YVDDML+ + + I +K LS++FDMK LG A +ILGM I RDR + +FL+Q S
Sbjct: 67 LLLYVDDMLIAAKSKEQITTLKKQLSSEFDMKNLGAAKKILGMEITRDRNSGLLFLSQQS 126
Query: 14 YVEK 3
Y++K
Sbjct: 127 YIKK 130
>gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 140 bits (353), Expect = 3e-34
Identities = 69/124 (55%), Positives = 88/124 (70%)
Frame = -2
Query: 374 FVDSKKPDHVCLLKKSLYGLKQSPRQWNKKFDECMLSLKFKRSSYDHCLYFKENASVPIF 195
F+ K +VC LK+SLYGLKQSPRQWNK+FD MLS FKRS YD C+Y K PI+
Sbjct: 951 FIVPGKEKYVCKLKRSLYGLKQSPRQWNKRFDSFMLSHSFKRSKYDSCVYIKHVNGSPIY 1010
Query: 194 LLIYVDDMLLISSCIKSIEHVKNCLSAKFDMKYLGDANRILGMNIVRDRKNSTVFLNQIS 15
LL+YVDDML+ + I +K LS++FDMK LG A +ILGM I RDRK+ +FL+Q +
Sbjct: 1011 LLLYVDDMLIAAKSKIEITKLKKLLSSEFDMKDLGSAKKILGMEISRDRKSGLLFLSQHN 1070
Query: 14 YVEK 3
Y++K
Sbjct: 1071 YIKK 1074
>emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group]
Length = 1335
Score = 140 bits (353), Expect = 3e-34
Identities = 69/124 (55%), Positives = 88/124 (70%)
Frame = -2
Query: 374 FVDSKKPDHVCLLKKSLYGLKQSPRQWNKKFDECMLSLKFKRSSYDHCLYFKENASVPIF 195
F+ K +VC LK+SLYGLKQSPRQWNK+FD MLS FKRS YD C+Y K PI+
Sbjct: 953 FIVPGKEKYVCKLKRSLYGLKQSPRQWNKRFDSFMLSHSFKRSKYDSCVYIKHVNGSPIY 1012
Query: 194 LLIYVDDMLLISSCIKSIEHVKNCLSAKFDMKYLGDANRILGMNIVRDRKNSTVFLNQIS 15
LL+YVDDML+ + I +K LS++FDMK LG A +ILGM I RDRK+ +FL+Q +
Sbjct: 1013 LLLYVDDMLIAAKSKIEITKLKKLLSSEFDMKDLGSAKKILGMEISRDRKSGLLFLSQHN 1072
Query: 14 YVEK 3
Y++K
Sbjct: 1073 YIKK 1076
>gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group] gi|77549942|gb|ABA92739.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 1373
Score = 140 bits (353), Expect = 3e-34
Identities = 69/124 (55%), Positives = 88/124 (70%)
Frame = -2
Query: 374 FVDSKKPDHVCLLKKSLYGLKQSPRQWNKKFDECMLSLKFKRSSYDHCLYFKENASVPIF 195
F+ K +VC LK+SLYGLKQSPRQWNK+FD MLS FKRS YD C+Y K PI+
Sbjct: 951 FIVPGKEKYVCKLKRSLYGLKQSPRQWNKRFDSFMLSHSFKRSKYDSCVYIKHVNGSPIY 1010
Query: 194 LLIYVDDMLLISSCIKSIEHVKNCLSAKFDMKYLGDANRILGMNIVRDRKNSTVFLNQIS 15
LL+YVDDML+ + I +K LS++FDMK LG A +ILGM I RDRK+ +FL+Q +
Sbjct: 1011 LLLYVDDMLIAAKSKIEITKLKKLLSSEFDMKDLGSAKKILGMEISRDRKSGLLFLSQHN 1070
Query: 14 YVEK 3
Y++K
Sbjct: 1071 YIKK 1074
>gb|ABD19042.1| reverse transcriptase, partial [Phelipanche bungeana]
Length = 87
Score = 126 bits (317), Expect = 6e-34
Identities = 59/68 (86%), Positives = 62/68 (91%)
Frame = -2
Query: 374 FVDSKKPDHVCLLKKSLYGLKQSPRQWNKKFDECMLSLKFKRSSYDHCLYFKENASVPIF 195
FVDSK P+HVCLLKK+LYGLKQSPRQWNKKFD MLSL FKRSSYD CLYFKEN +VPIF
Sbjct: 20 FVDSKNPNHVCLLKKALYGLKQSPRQWNKKFDSYMLSLDFKRSSYDPCLYFKENTTVPIF 79
Query: 194 LLIYVDDM 171
LLIYVDDM
Sbjct: 80 LLIYVDDM 87
>gb|ABD18977.1| reverse transcriptase, partial [Orobanche owerinii]
Length = 87
Score = 126 bits (316), Expect = 9e-34
Identities = 56/70 (80%), Positives = 64/70 (91%)
Frame = -2
Query: 380 LSFVDSKKPDHVCLLKKSLYGLKQSPRQWNKKFDECMLSLKFKRSSYDHCLYFKENASVP 201
+ FVD K P+HVCLLKKSLYGLKQSPRQWNKKFDECMLSLKF+RS+YDHCLY+K ++ P
Sbjct: 18 VGFVDRKHPNHVCLLKKSLYGLKQSPRQWNKKFDECMLSLKFERSNYDHCLYYKIDSENP 77
Query: 200 IFLLIYVDDM 171
+FLLIYVDDM
Sbjct: 78 VFLLIYVDDM 87
>gb|ABD18955.1| reverse transcriptase, partial [Orobanche crenata]
Length = 87
Score = 125 bits (314), Expect = 2e-33
Identities = 56/70 (80%), Positives = 63/70 (90%)
Frame = -2
Query: 380 LSFVDSKKPDHVCLLKKSLYGLKQSPRQWNKKFDECMLSLKFKRSSYDHCLYFKENASVP 201
+ FVD K P+HVCLLKKSLYGLKQSPRQWNKKFDECMLSLKF RS+YDHCLY+K ++ P
Sbjct: 18 VGFVDPKHPNHVCLLKKSLYGLKQSPRQWNKKFDECMLSLKFDRSNYDHCLYYKIDSENP 77
Query: 200 IFLLIYVDDM 171
+FLLIYVDDM
Sbjct: 78 VFLLIYVDDM 87
>gb|ABD18939.1| reverse transcriptase, partial [Orobanche crenata]
Length = 87
Score = 125 bits (314), Expect = 2e-33
Identities = 56/70 (80%), Positives = 63/70 (90%)
Frame = -2
Query: 380 LSFVDSKKPDHVCLLKKSLYGLKQSPRQWNKKFDECMLSLKFKRSSYDHCLYFKENASVP 201
+ FVD K P+HVCLLKKSLYGLKQSPRQWNKKFDECMLSLKF RS+YDHCLY+K ++ P
Sbjct: 18 VGFVDPKHPNHVCLLKKSLYGLKQSPRQWNKKFDECMLSLKFDRSNYDHCLYYKIDSENP 77
Query: 200 IFLLIYVDDM 171
+FLLIYVDDM
Sbjct: 78 VFLLIYVDDM 87
>gb|ABD18946.1| reverse transcriptase, partial [Orobanche crenata]
Length = 87
Score = 125 bits (314), Expect = 2e-33
Identities = 56/70 (80%), Positives = 63/70 (90%)
Frame = -2
Query: 380 LSFVDSKKPDHVCLLKKSLYGLKQSPRQWNKKFDECMLSLKFKRSSYDHCLYFKENASVP 201
+ FVD K P+HVCLLKKSLYGLKQSPRQWNKKFDECMLSLKF RS+YDHCLY+K ++ P
Sbjct: 18 VGFVDPKHPNHVCLLKKSLYGLKQSPRQWNKKFDECMLSLKFARSNYDHCLYYKIDSENP 77
Query: 200 IFLLIYVDDM 171
+FLLIYVDDM
Sbjct: 78 VFLLIYVDDM 87
>gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 137 bits (344), Expect = 4e-33
Identities = 68/124 (54%), Positives = 87/124 (70%)
Frame = -2
Query: 374 FVDSKKPDHVCLLKKSLYGLKQSPRQWNKKFDECMLSLKFKRSSYDHCLYFKENASVPIF 195
F+ K +VC LK+SLYGLKQSPRQWNK+FD MLS FKRS YD C+Y K PI+
Sbjct: 951 FIVPGKEKYVCKLKRSLYGLKQSPRQWNKRFDSFMLSHSFKRSKYDSCVYIKHVNGSPIY 1010
Query: 194 LLIYVDDMLLISSCIKSIEHVKNCLSAKFDMKYLGDANRILGMNIVRDRKNSTVFLNQIS 15
LL+YVDDML+ + I +K LS++FDMK LG A +IL M I RDRK+ +FL+Q +
Sbjct: 1011 LLLYVDDMLIAAKSKIEITKLKKLLSSEFDMKDLGSAKKILVMEISRDRKSGLLFLSQHN 1070
Query: 14 YVEK 3
Y++K
Sbjct: 1071 YIKK 1074
>gb|ABD19025.1| reverse transcriptase, partial [Orobanche cernua var. australiana]
Length = 87
Score = 124 bits (311), Expect = 5e-33
Identities = 55/68 (80%), Positives = 63/68 (92%)
Frame = -2
Query: 374 FVDSKKPDHVCLLKKSLYGLKQSPRQWNKKFDECMLSLKFKRSSYDHCLYFKENASVPIF 195
FVD KP+HVCLLKK++YGLKQSPR+WNKKFD M+SLKFKRSSYD CLYFK+N+SVPIF
Sbjct: 20 FVDPSKPEHVCLLKKTIYGLKQSPREWNKKFDSYMISLKFKRSSYDPCLYFKDNSSVPIF 79
Query: 194 LLIYVDDM 171
LL+YVDDM
Sbjct: 80 LLLYVDDM 87
>gb|ABD19090.1| reverse transcriptase, partial [Phelipanche tunetana]
Length = 87
Score = 124 bits (311), Expect = 5e-33
Identities = 58/68 (85%), Positives = 61/68 (89%)
Frame = -2
Query: 374 FVDSKKPDHVCLLKKSLYGLKQSPRQWNKKFDECMLSLKFKRSSYDHCLYFKENASVPIF 195
FVDSK P+HVCLLKK+LYGLKQSPRQWNKKFD MLSL FKRSSYD CLYFKEN +VPIF
Sbjct: 20 FVDSKNPNHVCLLKKALYGLKQSPRQWNKKFDSYMLSLDFKRSSYDPCLYFKENTTVPIF 79
Query: 194 LLIYVDDM 171
LLIY DDM
Sbjct: 80 LLIYEDDM 87
>gb|ABD18974.1| reverse transcriptase, partial [Orobanche owerinii]
Length = 87
Score = 124 bits (311), Expect = 5e-33
Identities = 55/70 (78%), Positives = 63/70 (90%)
Frame = -2
Query: 380 LSFVDSKKPDHVCLLKKSLYGLKQSPRQWNKKFDECMLSLKFKRSSYDHCLYFKENASVP 201
+ FVD K P+HVCLLKKSLYGLKQ+PRQWNKKFDECMLSLKF RS+YDHCLY+K ++ P
Sbjct: 18 VGFVDPKHPNHVCLLKKSLYGLKQTPRQWNKKFDECMLSLKFDRSNYDHCLYYKIDSENP 77
Query: 200 IFLLIYVDDM 171
+FLLIYVDDM
Sbjct: 78 VFLLIYVDDM 87
>gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group]
gi|53370655|gb|AAU89150.1| integrase core domain
containing protein [Oryza sativa Japonica Group]
gi|108710286|gb|ABF98081.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1322
Score = 136 bits (342), Expect = 8e-33
Identities = 68/124 (54%), Positives = 88/124 (70%)
Frame = -2
Query: 374 FVDSKKPDHVCLLKKSLYGLKQSPRQWNKKFDECMLSLKFKRSSYDHCLYFKENASVPIF 195
F+ K D+VC LK+SLYGLKQSPRQW K+FD MLS FKRS +D C+Y K PI+
Sbjct: 940 FIVPGKEDYVCKLKRSLYGLKQSPRQWYKRFDSFMLSHGFKRSEFDSCVYIKFVNGSPIY 999
Query: 194 LLIYVDDMLLISSCIKSIEHVKNCLSAKFDMKYLGDANRILGMNIVRDRKNSTVFLNQIS 15
LL+YVDDML+ + + I +K LS++FDMK LG A +ILGM I RDR + +FL+Q S
Sbjct: 1000 LLLYVDDMLIAAKSKEQITTLKKQLSSEFDMKDLGAAKKILGMEITRDRNSGLLFLSQQS 1059
Query: 14 YVEK 3
Y++K
Sbjct: 1060 YIKK 1063
>emb|CAA20201.1| putative transposable element [Arabidopsis thaliana]
gi|7268932|emb|CAB79135.1| putative transposable element
[Arabidopsis thaliana]
Length = 1308
Score = 135 bits (340), Expect = 1e-32
Identities = 69/125 (55%), Positives = 90/125 (72%), Gaps = 1/125 (0%)
Frame = -2
Query: 374 FVDSKKPDHVCLLKKSLYGLKQSPRQWNKKFDECMLSLKFKRSSYDHCLYFKE-NASVPI 198
F + + D VCLLKKSLYGLKQ+PRQWNKKF MLSL+F RS +D C+Y KE N +
Sbjct: 954 FEVNPEKDQVCLLKKSLYGLKQAPRQWNKKFHAFMLSLQFARSEHDSCVYVKEVNPGEFV 1013
Query: 197 FLLIYVDDMLLISSCIKSIEHVKNCLSAKFDMKYLGDANRILGMNIVRDRKNSTVFLNQI 18
+LL+YVDDMLL + I +K LS KF+MK +G A+RILG++I+R+RK T+ L+Q
Sbjct: 1014 YLLLYVDDMLLAAKSKSEISKLKEALSLKFEMKDMGAASRILGIDIIRNRKEGTLRLSQT 1073
Query: 17 SYVEK 3
YV+K
Sbjct: 1074 RYVDK 1078
>gb|ABD19017.1| reverse transcriptase, partial [Orobanche cernua var. australiana]
Length = 87
Score = 122 bits (306), Expect = 3e-32
Identities = 54/69 (78%), Positives = 63/69 (91%)
Frame = -2
Query: 377 SFVDSKKPDHVCLLKKSLYGLKQSPRQWNKKFDECMLSLKFKRSSYDHCLYFKENASVPI 198
SFVD K P+HVCLLKKS+YGLKQSPRQWNKKFDE MLSLKF RS+YDHCLY++ ++ +P+
Sbjct: 19 SFVDPKFPNHVCLLKKSIYGLKQSPRQWNKKFDEYMLSLKFSRSNYDHCLYYRIDSKIPV 78
Query: 197 FLLIYVDDM 171
FLLIYVDDM
Sbjct: 79 FLLIYVDDM 87
>emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis]
Length = 1334
Score = 134 bits (337), Expect = 4e-32
Identities = 66/120 (55%), Positives = 89/120 (74%), Gaps = 1/120 (0%)
Frame = -2
Query: 359 KPDHVCLLKKSLYGLKQSPRQWNKKFDECMLSLKFKRSSYDHCLYFKENASVPI-FLLIY 183
K D+VCLL KSLYGLKQSPRQW ++FD+ M+S ++RS YD C+YF + + +LL+Y
Sbjct: 953 KEDYVCLLHKSLYGLKQSPRQWYRRFDDFMVSKGYRRSRYDSCVYFGGSDQGGVAYLLLY 1012
Query: 182 VDDMLLISSCIKSIEHVKNCLSAKFDMKYLGDANRILGMNIVRDRKNSTVFLNQISYVEK 3
VDDML+ S IE +KN L A+F+MK LG+A RILGM+I+RDR T+FL+Q Y++K
Sbjct: 1013 VDDMLIASKYKSEIERLKNLLKAEFEMKDLGNAKRILGMDIIRDRSAGTLFLSQGKYIKK 1072
>emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera]
Length = 1643
Score = 134 bits (337), Expect = 4e-32
Identities = 69/128 (53%), Positives = 91/128 (71%), Gaps = 4/128 (3%)
Frame = -2
Query: 374 FVDSKKPDHVCLLKKSLYGLKQSPRQWNKKFDECMLSLKFKRSSYDHCLYFKENASVP-- 201
FVDS+K DHVC LKKSLYGLKQSPRQW K+FD M+S +F R+ YD C+YFK ++P
Sbjct: 1249 FVDSEKSDHVCFLKKSLYGLKQSPRQWYKRFDAFMVSHEFMRNQYDSCVYFK---TLPDG 1305
Query: 200 --IFLLIYVDDMLLISSCIKSIEHVKNCLSAKFDMKYLGDANRILGMNIVRDRKNSTVFL 27
I+LL+YVDDML+ + I +K LS++F+MK LG A +ILGM I RDR +++
Sbjct: 1306 SFIYLLLYVDDMLIAAKNRAEINKLKQLLSSEFEMKDLGAAKKILGMEIWRDRDAGLLYV 1365
Query: 26 NQISYVEK 3
+Q Y+EK
Sbjct: 1366 SQQKYIEK 1373
>gb|ABD19010.1| reverse transcriptase, partial [Orobanche cernua var. desertorum]
Length = 87
Score = 122 bits (305), Expect = 4e-32
Identities = 55/70 (78%), Positives = 62/70 (88%)
Frame = -2
Query: 380 LSFVDSKKPDHVCLLKKSLYGLKQSPRQWNKKFDECMLSLKFKRSSYDHCLYFKENASVP 201
+ FVD K P+HVCLLKKSLYGLKQSPRQWNKKFDE MLSLKF RS+YDHCLY+K ++ P
Sbjct: 18 IGFVDPKHPNHVCLLKKSLYGLKQSPRQWNKKFDEYMLSLKFVRSNYDHCLYYKTDSKNP 77
Query: 200 IFLLIYVDDM 171
+FLLIYVDDM
Sbjct: 78 VFLLIYVDDM 87