BLASTX nr result
ID: Rehmannia28_contig00011624
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia28_contig00011624
(639 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AJE29370.1| putative gag protein [Coffea canephora] 72 3e-27
ref|XP_010277638.1| PREDICTED: uncharacterized protein LOC104612... 49 1e-17
ref|XP_007046118.1| Uncharacterized protein TCM_011728 [Theobrom... 55 2e-15
ref|XP_007034896.1| Uncharacterized protein TCM_020722 [Theobrom... 53 7e-15
ref|XP_007026864.1| Adenine nucleotide alpha hydrolases-like sup... 52 9e-14
gb|KYP71220.1| Retrovirus-related Pol polyprotein from transposo... 44 7e-13
ref|XP_007010124.1| Uncharacterized protein TCM_043452 [Theobrom... 63 1e-12
ref|XP_011459790.1| PREDICTED: uncharacterized protein LOC105350... 42 2e-12
ref|XP_007024836.1| Leucine-rich repeat transmembrane protein ki... 48 2e-12
ref|XP_010692517.1| PREDICTED: uncharacterized protein LOC104905... 44 2e-11
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group] 40 3e-11
dbj|BAH90873.1| Os01g0116166 [Oryza sativa Japonica Group] 43 4e-11
emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group] 42 7e-11
emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group] 42 7e-11
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-... 42 9e-11
dbj|BAF27642.2| Os11g0157000 [Oryza sativa Japonica Group] 42 9e-11
emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group] 42 9e-11
emb|CAN67309.1| hypothetical protein VITISV_028165 [Vitis vinifera] 41 1e-10
emb|CAD40363.2| OSJNBa0093P23.9 [Oryza sativa Japonica Group] 41 2e-10
emb|CAH66022.1| OSIGBa0105O19.1 [Oryza sativa Indica Group] 41 2e-10
>gb|AJE29370.1| putative gag protein [Coffea canephora]
Length = 433
Score = 72.4 bits (176), Expect(3) = 3e-27
Identities = 33/56 (58%), Positives = 42/56 (75%)
Frame = -1
Query: 609 LTVSTRIDTSSRD*WILDSGCIMHVYSRRDYFDLLQLQRAGILFSGDGSICRIMGL 442
LT+S +TSSRD WILDSGC+ HV SR DYFD LQ ++AG + GDGS C++ G+
Sbjct: 269 LTISKGNNTSSRDGWILDSGCVSHVCSRLDYFDTLQRKKAGFMCLGDGSTCQVKGV 324
Score = 53.9 bits (128), Expect(3) = 3e-27
Identities = 27/38 (71%), Positives = 32/38 (84%)
Frame = -3
Query: 448 GIGVVKIKMGDGVDRTLGGVAYVPKMRMNLISWCQVDS 335
G+GVVKIKM +G R+LGGVAYVPK+R NLIS Q+DS
Sbjct: 323 GVGVVKIKMLNGEIRSLGGVAYVPKLRRNLISLNQLDS 360
Score = 43.5 bits (101), Expect(3) = 3e-27
Identities = 29/69 (42%), Positives = 34/69 (49%)
Frame = -2
Query: 323 YSAGGGVLKITRGGRVLRMREKYRNLYRLVTSRITGSGSAPEGFQGTDGCEGNPAGREDG 144
+SA GVLKIT G VL M +KY NLY L TS + Q T+G E +G
Sbjct: 365 FSAASGVLKITYGETVLLMGKKYGNLYHLNTSMDWEQNGIQKCSQITNGGERKNPAMGEG 424
Query: 143 SRSSLSAVN 117
LS VN
Sbjct: 425 ELRPLSRVN 433
>ref|XP_010277638.1| PREDICTED: uncharacterized protein LOC104612030 [Nelumbo nucifera]
Length = 201
Score = 48.5 bits (114), Expect(3) = 1e-17
Identities = 22/56 (39%), Positives = 34/56 (60%)
Frame = -1
Query: 609 LTVSTRIDTSSRD*WILDSGCIMHVYSRRDYFDLLQLQRAGILFSGDGSICRIMGL 442
L VS + S + W+LD GC MH++ R++YFD Q ++ ++ GD S C IM +
Sbjct: 12 LIVSEGMCYFSPNEWVLDFGCSMHIFFRKEYFDTFQERKTCVVSLGDESTCNIMSV 67
Score = 47.0 bits (110), Expect(3) = 1e-17
Identities = 23/42 (54%), Positives = 27/42 (64%)
Frame = -3
Query: 445 IGVVKIKMGDGVDRTLGGVAYVPKMRMNLISWCQVDSNSCDI 320
+G +KIKM D V TLGG YV KM NLIS Q+DS C +
Sbjct: 67 VGTMKIKMFDRVVHTLGGATYVSKMCRNLISLSQLDSKECKV 108
Score = 41.2 bits (95), Expect(3) = 1e-17
Identities = 31/93 (33%), Positives = 39/93 (41%), Gaps = 26/93 (27%)
Frame = -2
Query: 335 QQLRYSAGGGVLKITRGGRVLRMREKYRNLYRLVTSRITGSG------------------ 210
++ + A GG +KITRG VL EK + LY LV S I
Sbjct: 104 KECKVFAAGGAIKITRGDMVLMKEEKCKGLYHLVKSTIVPKTLMGCWKRNVQXSVATRRV 163
Query: 209 -------SAPEGFQGTDGCEGN-PAGREDGSRS 135
++ FQG D E P GRE+GSRS
Sbjct: 164 SFADKVETSAASFQGIDDGEKKIPIGREEGSRS 196
>ref|XP_007046118.1| Uncharacterized protein TCM_011728 [Theobroma cacao]
gi|508710053|gb|EOY01950.1| Uncharacterized protein
TCM_011728 [Theobroma cacao]
Length = 176
Score = 55.5 bits (132), Expect(3) = 2e-15
Identities = 31/47 (65%), Positives = 35/47 (74%), Gaps = 5/47 (10%)
Frame = -3
Query: 448 GIGVVKIKMGDGVDRTLGGVAYVPKMRMNLISWCQVDS-----NSCD 323
GI VVKIKM DGV R+LGGVAYVPKMR NLIS +DS ++CD
Sbjct: 47 GIRVVKIKMFDGVVRSLGGVAYVPKMRKNLISLSLLDSKGFGYSACD 93
Score = 39.3 bits (90), Expect(3) = 2e-15
Identities = 21/48 (43%), Positives = 28/48 (58%)
Frame = -1
Query: 567 WILDSGCIMHVYSRRDYFDLLQLQRAGILFSGDGSICRIMGLEW*KSK 424
W LDS H+ ++D FDLLQ AG L G+ SI ++MG+ K K
Sbjct: 7 WYLDSASATHICYQKDCFDLLQEGVAGNLTLGNKSIVKVMGIRVVKIK 54
Score = 35.0 bits (79), Expect(3) = 2e-15
Identities = 32/88 (36%), Positives = 41/88 (46%), Gaps = 19/88 (21%)
Frame = -2
Query: 323 YSAGGGVLKITRGGRVLRMREKYRNLYRLVT------SRITGSGS-------APEGFQGT 183
YSA GV+K+T+G VL + LYRL + TG GS A E +G+
Sbjct: 89 YSACDGVVKVTQGDMVLMRGNLHNGLYRLECEASKGWEQCTGDGSYQSEISFAEEVMKGS 148
Query: 182 DGCEG-----NPAGRE-DGSRSSLSAVN 117
G + N A E +GS SLS VN
Sbjct: 149 HGVDDGERTKNLASSELEGSSRSLSEVN 176
>ref|XP_007034896.1| Uncharacterized protein TCM_020722 [Theobroma cacao]
gi|508713925|gb|EOY05822.1| Uncharacterized protein
TCM_020722 [Theobroma cacao]
Length = 218
Score = 52.8 bits (125), Expect(3) = 7e-15
Identities = 29/47 (61%), Positives = 34/47 (72%), Gaps = 5/47 (10%)
Frame = -3
Query: 448 GIGVVKIKMGDGVDRTLGGVAYVPKMRMNLISWCQVDS-----NSCD 323
G+ VVKIKM DGV +LGGVAYVPKMR NLIS +DS ++CD
Sbjct: 89 GLAVVKIKMFDGVVLSLGGVAYVPKMRKNLISLSLLDSKGYGYSACD 135
Score = 42.0 bits (97), Expect(3) = 7e-15
Identities = 24/56 (42%), Positives = 33/56 (58%)
Frame = -1
Query: 609 LTVSTRIDTSSRD*WILDSGCIMHVYSRRDYFDLLQLQRAGILFSGDGSICRIMGL 442
LT+S +D + W LDS H+ ++D FDLLQ AG L G+ SI ++MGL
Sbjct: 37 LTISEDMDANFD--WYLDSASATHICYQKDCFDLLQEGMAGNLTLGNKSIVKVMGL 90
Score = 32.7 bits (73), Expect(3) = 7e-15
Identities = 22/69 (31%), Positives = 31/69 (44%), Gaps = 6/69 (8%)
Frame = -2
Query: 323 YSAGGGVLKITRGGRVLRMREKYRNLYRLVT------SRITGSGSAPEGFQGTDGCEGNP 162
YSA GV+K+T+G VL + LYRL + TG GS + +
Sbjct: 131 YSACDGVVKVTQGDMVLMRGNLHNGLYRLECEASKGWEQCTGDGSYQSEISFVEEVMKDS 190
Query: 161 AGREDGSRS 135
G +DG R+
Sbjct: 191 HGVDDGERT 199
>ref|XP_007026864.1| Adenine nucleotide alpha hydrolases-like superfamily protein
[Theobroma cacao] gi|508715469|gb|EOY07366.1| Adenine
nucleotide alpha hydrolases-like superfamily protein
[Theobroma cacao]
Length = 434
Score = 52.4 bits (124), Expect(3) = 9e-14
Identities = 29/47 (61%), Positives = 34/47 (72%), Gaps = 5/47 (10%)
Frame = -3
Query: 448 GIGVVKIKMGDGVDRTLGGVAYVPKMRMNLISWCQVDS-----NSCD 323
G+ VVKIKM DGV R+LGGVAYVPKM NLIS +DS ++CD
Sbjct: 305 GLVVVKIKMFDGVVRSLGGVAYVPKMHKNLISLSLLDSKGYGYSACD 351
Score = 40.8 bits (94), Expect(3) = 9e-14
Identities = 25/65 (38%), Positives = 36/65 (55%)
Frame = -1
Query: 636 GDSCGSWRYLTVSTRIDTSSRD*WILDSGCIMHVYSRRDYFDLLQLQRAGILFSGDGSIC 457
GD+C LT+S +D +S W LD H+ +++ FDLLQ G L G+ SI
Sbjct: 247 GDNCD---VLTISENMDANSD--WYLDFASATHICYQKNCFDLLQEGVTGNLTLGNKSIV 301
Query: 456 RIMGL 442
++MGL
Sbjct: 302 KVMGL 306
Score = 30.4 bits (67), Expect(3) = 9e-14
Identities = 21/69 (30%), Positives = 30/69 (43%), Gaps = 6/69 (8%)
Frame = -2
Query: 323 YSAGGGVLKITRGGRVLRMREKYRNLYRLVT------SRITGSGSAPEGFQGTDGCEGNP 162
YSA GV+K+T+G VL + LY L + TG GS + +
Sbjct: 347 YSACDGVVKVTQGDMVLMRGNLHNGLYHLECEASKGWEQCTGDGSYQSEISLAEEVMKDS 406
Query: 161 AGREDGSRS 135
G +DG R+
Sbjct: 407 HGVDDGERT 415
>gb|KYP71220.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 690
Score = 43.9 bits (102), Expect(3) = 7e-13
Identities = 19/54 (35%), Positives = 31/54 (57%)
Frame = -1
Query: 603 VSTRIDTSSRD*WILDSGCIMHVYSRRDYFDLLQLQRAGILFSGDGSICRIMGL 442
+S D S+ WILDSGC H+ +D F L+ +G++ G+ + C+I G+
Sbjct: 275 ISVSSDKRSKTEWILDSGCTFHMCPYKDLFTTLEPVDSGVVLMGNDTQCKIAGI 328
Score = 39.7 bits (91), Expect(3) = 7e-13
Identities = 18/46 (39%), Positives = 27/46 (58%)
Frame = -3
Query: 448 GIGVVKIKMGDGVDRTLGGVAYVPKMRMNLISWCQVDSNSCDIQLE 311
GIG ++IK DG +TL V ++P ++ NLIS ++S C E
Sbjct: 327 GIGTIQIKTHDGTIKTLSNVRFIPDLKRNLISLGTLESLGCKYSAE 372
Score = 37.0 bits (84), Expect(3) = 7e-13
Identities = 19/49 (38%), Positives = 27/49 (55%)
Frame = -2
Query: 326 RYSAGGGVLKITRGGRVLRMREKYRNLYRLVTSRITGSGSAPEGFQGTD 180
+YSA GGVLK+++G VL + +LY L S +TGS + D
Sbjct: 368 KYSAEGGVLKVSKGAIVLLKANRIGSLYILQGSIVTGSAAVSSSMSDKD 416
>ref|XP_007010124.1| Uncharacterized protein TCM_043452 [Theobroma cacao]
gi|508727037|gb|EOY18934.1| Uncharacterized protein
TCM_043452 [Theobroma cacao]
Length = 166
Score = 62.8 bits (151), Expect(2) = 1e-12
Identities = 33/45 (73%), Positives = 35/45 (77%)
Frame = -3
Query: 448 GIGVVKIKMGDGVDRTLGGVAYVPKMRMNLISWCQVDSNSCDIQL 314
GIGVVKIKM DGV R+LGGVAYVPKMR NLIS +DS DI L
Sbjct: 47 GIGVVKIKMFDGVVRSLGGVAYVPKMRKNLISLSLLDSKGSDITL 91
Score = 37.4 bits (85), Expect(2) = 1e-12
Identities = 18/42 (42%), Positives = 25/42 (59%)
Frame = -1
Query: 567 WILDSGCIMHVYSRRDYFDLLQLQRAGILFSGDGSICRIMGL 442
W LDS H+ ++D FDLLQ G L G+ SI ++MG+
Sbjct: 7 WYLDSASATHICYQKDCFDLLQEVVVGNLTLGNKSIVKVMGI 48
>ref|XP_011459790.1| PREDICTED: uncharacterized protein LOC105350096 [Fragaria vesca
subsp. vesca]
Length = 201
Score = 41.6 bits (96), Expect(3) = 2e-12
Identities = 24/57 (42%), Positives = 34/57 (59%)
Frame = -1
Query: 612 YLTVSTRIDTSSRD*WILDSGCIMHVYSRRDYFDLLQLQRAGILFSGDGSICRIMGL 442
+L VS T S+ WILD+G H+ RR+YFD Q + G + GDG+ R+MG+
Sbjct: 14 FLMVSKGKYTCSQRDWILDTGSSNHLCFRREYFDTFQ-EVKGFVTWGDGTRRRVMGV 69
Score = 41.2 bits (95), Expect(3) = 2e-12
Identities = 20/38 (52%), Positives = 25/38 (65%)
Frame = -3
Query: 448 GIGVVKIKMGDGVDRTLGGVAYVPKMRMNLISWCQVDS 335
G+G VK+KM DG +LG V +VP R NL S Q+DS
Sbjct: 68 GVGTVKVKMFDGAVCSLGDVVFVPTFRRNLKSLSQLDS 105
Score = 36.6 bits (83), Expect(3) = 2e-12
Identities = 32/93 (34%), Positives = 44/93 (47%), Gaps = 23/93 (24%)
Frame = -2
Query: 326 RYSAGGGVLKITRGGRVLRMREKYRNLYRLV----TSRITGSGSAPE------------- 198
R S+ GGV+K++RG VL EK +++RL+ TS++ G A E
Sbjct: 109 RVSSAGGVMKVSRGFMVLMKGEKCGSMFRLIGKTQTSKVVGKQCAQESRYLRQVLFAGIA 168
Query: 197 -----GFQ-GTDGCEGNPAGREDGSRSSLSAVN 117
FQ DG + NPA RE+ SL VN
Sbjct: 169 KRAGTSFQVSDDGEKVNPA-REEVKTRSLFRVN 200
>ref|XP_007024836.1| Leucine-rich repeat transmembrane protein kinase [Theobroma cacao]
gi|508780202|gb|EOY27458.1| Leucine-rich repeat
transmembrane protein kinase [Theobroma cacao]
Length = 1179
Score = 48.1 bits (113), Expect(3) = 2e-12
Identities = 24/32 (75%), Positives = 27/32 (84%)
Frame = -3
Query: 448 GIGVVKIKMGDGVDRTLGGVAYVPKMRMNLIS 353
G+ VVKIKM DGV R+L G+AYVPKMR NLIS
Sbjct: 1075 GLEVVKIKMFDGVVRSLDGMAYVPKMRKNLIS 1106
Score = 46.6 bits (109), Expect(3) = 2e-12
Identities = 30/71 (42%), Positives = 40/71 (56%)
Frame = -1
Query: 636 GDSCGSWRYLTVSTRIDTSSRD*WILDSGCIMHVYSRRDYFDLLQLQRAGILFSGDGSIC 457
GD C LT+S +D +S W L+S H+ ++D FDLLQ AG L G+ SI
Sbjct: 1017 GDDCD---VLTISENMDANSY--WYLNSASATHICYQKDCFDLLQEGVAGNLTLGNKSIV 1071
Query: 456 RIMGLEW*KSK 424
++MGLE K K
Sbjct: 1072 KVMGLEVVKIK 1082
Score = 24.3 bits (51), Expect(3) = 2e-12
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -2
Query: 323 YSAGGGVLKITRGGRVLRMREKYRNLYRL 237
YSA GV+K+T+ VL + LY L
Sbjct: 1117 YSACDGVVKVTQRDMVLMRGNLHNGLYHL 1145
>ref|XP_010692517.1| PREDICTED: uncharacterized protein LOC104905624 [Beta vulgaris
subsp. vulgaris]
Length = 2676
Score = 43.5 bits (101), Expect(3) = 2e-11
Identities = 22/41 (53%), Positives = 27/41 (65%)
Frame = -3
Query: 448 GIGVVKIKMGDGVDRTLGGVAYVPKMRMNLISWCQVDSNSC 326
GIG V I M DG RTL V +VP+M+ NLIS +D+N C
Sbjct: 332 GIGSVDITMFDGTVRTLSKVRHVPEMKKNLISLGTLDNNGC 372
Score = 38.1 bits (87), Expect(3) = 2e-11
Identities = 15/46 (32%), Positives = 26/46 (56%)
Frame = -1
Query: 579 SRD*WILDSGCIMHVYSRRDYFDLLQLQRAGILFSGDGSICRIMGL 442
S+ WI+DSGC HV +D F + G + G+ + C+++G+
Sbjct: 288 SKSEWIMDSGCSFHVTPYKDMFTSYEEFNGGTVTMGNNATCKVVGI 333
Score = 33.9 bits (76), Expect(3) = 2e-11
Identities = 19/49 (38%), Positives = 25/49 (51%)
Frame = -2
Query: 326 RYSAGGGVLKITRGGRVLRMREKYRNLYRLVTSRITGSGSAPEGFQGTD 180
+Y A GGVL + RG VL K +LY L S ++GS + G D
Sbjct: 373 KYIAEGGVLNVIRGALVLMKGIKRGSLYVLQGSMVSGSANVSTGTMSDD 421
>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1241
Score = 40.4 bits (93), Expect(3) = 3e-11
Identities = 19/37 (51%), Positives = 26/37 (70%)
Frame = -3
Query: 448 GIGVVKIKMGDGVDRTLGGVAYVPKMRMNLISWCQVD 338
GIG V+IKM DG RTL V ++P ++ +LIS C +D
Sbjct: 249 GIGTVQIKMFDGCIRTLLDVRHIPNLKRSLISLCTLD 285
Score = 38.9 bits (89), Expect(3) = 3e-11
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = -1
Query: 573 D*WILDSGCIMHVYSRRDYFDLLQLQRAGILFSGDGSICRIMGL 442
D WILD+ C H+ RD+F + + G + GD + C + G+
Sbjct: 207 DQWILDTACTYHMCPNRDWFATYEAVQGGTVLMGDDTPCEVAGI 250
Score = 35.8 bits (81), Expect(3) = 3e-11
Identities = 18/42 (42%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Frame = -2
Query: 326 RYSAGGGVLKITRGGRVLRMRE-KYRNLYRLVTSRITGSGSA 204
+YS G G+LK+T+G V+ + KY NLY L + I G+ +A
Sbjct: 290 KYSGGDGILKVTKGSLVVMKADIKYANLYHLRGTTILGNVAA 331
>dbj|BAH90873.1| Os01g0116166 [Oryza sativa Japonica Group]
Length = 778
Score = 43.1 bits (100), Expect(3) = 4e-11
Identities = 19/37 (51%), Positives = 27/37 (72%)
Frame = -3
Query: 448 GIGVVKIKMGDGVDRTLGGVAYVPKMRMNLISWCQVD 338
GIG V+IKM DG RTL V ++P ++ +LIS+C +D
Sbjct: 306 GIGTVQIKMFDGCIRTLSDVRHIPNLKRSLISFCTLD 342
Score = 38.9 bits (89), Expect(3) = 4e-11
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = -1
Query: 573 D*WILDSGCIMHVYSRRDYFDLLQLQRAGILFSGDGSICRIMGL 442
D WILD+ C H+ RD+F + + G + GD + C + G+
Sbjct: 264 DQWILDTACTYHMCPNRDWFATYETVQGGTVLMGDDTPCEVAGI 307
Score = 32.3 bits (72), Expect(3) = 4e-11
Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = -2
Query: 326 RYSAGGGVLKITRGGRVLRMRE-KYRNLYRLVTSRITGSGSA 204
+YS G G+LK+T+G V+ + K NLY L + I G+ +A
Sbjct: 347 KYSGGDGILKVTKGSLVVMKADIKSANLYHLRGTTILGNVAA 388
>emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group]
Length = 1205
Score = 42.0 bits (97), Expect(3) = 7e-11
Identities = 19/37 (51%), Positives = 26/37 (70%)
Frame = -3
Query: 448 GIGVVKIKMGDGVDRTLGGVAYVPKMRMNLISWCQVD 338
GIG V+IKM DG RTL V ++P ++ +LIS C +D
Sbjct: 325 GIGTVQIKMFDGCIRTLSDVRHIPNLKRSLISLCTLD 361
Score = 39.7 bits (91), Expect(3) = 7e-11
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = -1
Query: 573 D*WILDSGCIMHVYSRRDYFDLLQLQRAGILFSGDGSICRIMGL 442
D WILD+ C H+ RD+F ++ + G + GD + C + G+
Sbjct: 283 DQWILDTACTYHMCPNRDWFATYEVVQGGTVLMGDDTPCEVAGI 326
Score = 32.0 bits (71), Expect(3) = 7e-11
Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = -2
Query: 326 RYSAGGGVLKITRGGRVLRMRE-KYRNLYRLVTSRITGS 213
+YS G G+LK+T+G V+ + K NLY L + I G+
Sbjct: 366 KYSGGDGILKVTKGSLVVMKADIKSANLYHLQGTTILGN 404
>emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group]
Length = 1037
Score = 42.0 bits (97), Expect(3) = 7e-11
Identities = 19/37 (51%), Positives = 26/37 (70%)
Frame = -3
Query: 448 GIGVVKIKMGDGVDRTLGGVAYVPKMRMNLISWCQVD 338
GIG V+IKM DG RTL V ++P ++ +LIS C +D
Sbjct: 157 GIGTVQIKMFDGCIRTLSDVRHIPNLKRSLISLCTLD 193
Score = 39.7 bits (91), Expect(3) = 7e-11
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = -1
Query: 573 D*WILDSGCIMHVYSRRDYFDLLQLQRAGILFSGDGSICRIMGL 442
D WILD+ C H+ RD+F ++ + G + GD + C + G+
Sbjct: 115 DQWILDTACTYHMCPNRDWFATYEVVQGGTVLMGDDTPCEVAGI 158
Score = 32.0 bits (71), Expect(3) = 7e-11
Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = -2
Query: 326 RYSAGGGVLKITRGGRVLRMRE-KYRNLYRLVTSRITGS 213
+YS G G+LK+T+G V+ + K NLY L + I G+
Sbjct: 198 KYSGGDGILKVTKGSLVVMKADIKSANLYHLQGTTILGN 236
>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
sativa Japonica Group] gi|77548751|gb|ABA91548.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 2340
Score = 42.0 bits (97), Expect(3) = 9e-11
Identities = 19/37 (51%), Positives = 26/37 (70%)
Frame = -3
Query: 448 GIGVVKIKMGDGVDRTLGGVAYVPKMRMNLISWCQVD 338
GIG V+IKM DG RTL V ++P ++ +LIS C +D
Sbjct: 547 GIGTVQIKMFDGCIRTLSDVRHIPNLKRSLISLCTLD 583
Score = 38.9 bits (89), Expect(3) = 9e-11
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = -1
Query: 573 D*WILDSGCIMHVYSRRDYFDLLQLQRAGILFSGDGSICRIMGL 442
D WIL++ CI H+ RD+F + + G + GD + C + G+
Sbjct: 505 DQWILNTACIYHMCPNRDWFATYEAVQVGTVLMGDDTPCEVAGI 548
Score = 32.3 bits (72), Expect(3) = 9e-11
Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = -2
Query: 326 RYSAGGGVLKITRGGRVLRMRE-KYRNLYRLVTSRITGSGSA 204
+YS G G+LK+T+G V+ + K NLY L + I G+ +A
Sbjct: 588 KYSGGDGILKVTKGSLVVMKADIKSANLYHLRGTTILGNVAA 629
>dbj|BAF27642.2| Os11g0157000 [Oryza sativa Japonica Group]
Length = 1601
Score = 42.0 bits (97), Expect(3) = 9e-11
Identities = 19/37 (51%), Positives = 26/37 (70%)
Frame = -3
Query: 448 GIGVVKIKMGDGVDRTLGGVAYVPKMRMNLISWCQVD 338
GIG V+IKM DG RTL V ++P ++ +LIS C +D
Sbjct: 340 GIGTVQIKMFDGCIRTLSDVRHIPNLKRSLISLCTLD 376
Score = 38.9 bits (89), Expect(3) = 9e-11
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = -1
Query: 573 D*WILDSGCIMHVYSRRDYFDLLQLQRAGILFSGDGSICRIMGL 442
D WIL++ CI H+ RD+F + + G + GD + C + G+
Sbjct: 298 DQWILNTACIYHMCPNRDWFATYEAVQVGTVLMGDDTPCEVAGI 341
Score = 32.3 bits (72), Expect(3) = 9e-11
Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = -2
Query: 326 RYSAGGGVLKITRGGRVLRMRE-KYRNLYRLVTSRITGSGSA 204
+YS G G+LK+T+G V+ + K NLY L + I G+ +A
Sbjct: 381 KYSGGDGILKVTKGSLVVMKADIKSANLYHLRGTTILGNVAA 422
>emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]
Length = 1181
Score = 42.0 bits (97), Expect(3) = 9e-11
Identities = 19/37 (51%), Positives = 26/37 (70%)
Frame = -3
Query: 448 GIGVVKIKMGDGVDRTLGGVAYVPKMRMNLISWCQVD 338
GIG V+IKM DG RTL V ++P ++ +LIS C +D
Sbjct: 340 GIGTVQIKMFDGCIRTLSDVRHIPNLKRSLISLCTLD 376
Score = 39.7 bits (91), Expect(3) = 9e-11
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = -1
Query: 573 D*WILDSGCIMHVYSRRDYFDLLQLQRAGILFSGDGSICRIMGL 442
D WILD+ C H+ RD+F ++ + G + GD + C + G+
Sbjct: 298 DQWILDTACTYHMCPNRDWFATYEVVQGGTVLMGDDTPCEVAGI 341
Score = 31.6 bits (70), Expect(3) = 9e-11
Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = -2
Query: 326 RYSAGGGVLKITRGGR-VLRMREKYRNLYRLVTSRITGS 213
+YS G G+LK+T+G V++ K NLY L + I G+
Sbjct: 381 KYSGGDGILKVTKGSLVVMKASIKSANLYHLQGTTILGN 419
>emb|CAN67309.1| hypothetical protein VITISV_028165 [Vitis vinifera]
Length = 344
Score = 40.8 bits (94), Expect(3) = 1e-10
Identities = 20/41 (48%), Positives = 26/41 (63%)
Frame = -3
Query: 448 GIGVVKIKMGDGVDRTLGGVAYVPKMRMNLISWCQVDSNSC 326
GI ++IKM G+ RTL V +VPK+ NLI +DSN C
Sbjct: 275 GIHXIQIKMHGGIIRTLTNVRHVPKLNKNLIFLRTLDSNGC 315
Score = 40.0 bits (92), Expect(3) = 1e-10
Identities = 18/48 (37%), Positives = 27/48 (56%)
Frame = -1
Query: 585 TSSRD*WILDSGCIMHVYSRRDYFDLLQLQRAGILFSGDGSICRIMGL 442
T+S D WILDSGC H+ D+F Q G + G+ C+++G+
Sbjct: 229 TNSDDEWILDSGCSYHMSPNGDWFSTYQPIDGGKVLMGNKVACKVVGI 276
Score = 32.0 bits (71), Expect(3) = 1e-10
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = -2
Query: 323 YSAGGGVLKITRGGRVLRMREKYRNLY 243
Y AGGGVL++++GG V+ +K LY
Sbjct: 317 YKAGGGVLRVSKGGLVVMNGKKINGLY 343
>emb|CAD40363.2| OSJNBa0093P23.9 [Oryza sativa Japonica Group]
Length = 944
Score = 40.8 bits (94), Expect(3) = 2e-10
Identities = 18/37 (48%), Positives = 26/37 (70%)
Frame = -3
Query: 448 GIGVVKIKMGDGVDRTLGGVAYVPKMRMNLISWCQVD 338
GIG+V+IKM DG TL V ++P ++ +LIS C +D
Sbjct: 172 GIGIVQIKMFDGCISTLSDVRHIPNLKRSLISLCTLD 208
Score = 38.9 bits (89), Expect(3) = 2e-10
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = -1
Query: 573 D*WILDSGCIMHVYSRRDYFDLLQLQRAGILFSGDGSICRIMGL 442
D WILD+ C H+ RD+F + + G + GD + C + G+
Sbjct: 130 DQWILDTACTYHMCPNRDWFATYEAVQGGTVLMGDDTPCEVAGI 173
Score = 32.3 bits (72), Expect(3) = 2e-10
Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = -2
Query: 326 RYSAGGGVLKITRGGRVLRMRE-KYRNLYRLVTSRITGSGSA 204
+YS G G+LK+T+G V+ + K NLY L + I G+ +A
Sbjct: 213 KYSGGDGILKVTKGSLVVMKADIKSANLYHLRGTTILGNVAA 254
>emb|CAH66022.1| OSIGBa0105O19.1 [Oryza sativa Indica Group]
Length = 944
Score = 40.8 bits (94), Expect(3) = 2e-10
Identities = 18/37 (48%), Positives = 26/37 (70%)
Frame = -3
Query: 448 GIGVVKIKMGDGVDRTLGGVAYVPKMRMNLISWCQVD 338
GIG+V+IKM DG TL V ++P ++ +LIS C +D
Sbjct: 172 GIGIVQIKMFDGCISTLSDVRHIPNLKRSLISLCTLD 208
Score = 38.9 bits (89), Expect(3) = 2e-10
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = -1
Query: 573 D*WILDSGCIMHVYSRRDYFDLLQLQRAGILFSGDGSICRIMGL 442
D WILD+ C H+ RD+F + + G + GD + C + G+
Sbjct: 130 DQWILDTACTYHMCPNRDWFATYEAVQGGTVLMGDDTPCEVAGI 173
Score = 32.3 bits (72), Expect(3) = 2e-10
Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = -2
Query: 326 RYSAGGGVLKITRGGRVLRMRE-KYRNLYRLVTSRITGSGSA 204
+YS G G+LK+T+G V+ + K NLY L + I G+ +A
Sbjct: 213 KYSGGDGILKVTKGSLVVMKADIKSANLYHLRGTTILGNVAA 254