BLASTX nr result

ID: Rehmannia28_contig00011351 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00011351
         (424 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011089490.1| PREDICTED: E3 ubiquitin-protein ligase RING1...    79   9e-15
gb|KVI11957.1| protein of unknown function DUF1117 [Cynara cardu...    61   3e-08
gb|KVI03626.1| protein of unknown function DUF1117 [Cynara cardu...    58   2e-07
ref|XP_008777326.1| PREDICTED: E3 ubiquitin-protein ligase RING1...    58   3e-07
emb|CDP09090.1| unnamed protein product [Coffea canephora]             57   8e-07
ref|XP_015874028.1| PREDICTED: E3 ubiquitin-protein ligase RING1...    56   1e-06
ref|XP_002283212.1| PREDICTED: E3 ubiquitin-protein ligase RING1...    54   5e-06
emb|CAN72193.1| hypothetical protein VITISV_022309 [Vitis vinifera]    54   6e-06
gb|KMZ57190.1| RING/U-box superfamily protein [Zostera marina]         54   7e-06

>ref|XP_011089490.1| PREDICTED: E3 ubiquitin-protein ligase RING1 [Sesamum indicum]
          Length = 355

 Score = 79.0 bits (193), Expect = 9e-15
 Identities = 33/46 (71%), Positives = 38/46 (82%), Gaps = 1/46 (2%)
 Frame = -3

Query: 176 YWCYQCTRIVSVL-AEDAVVCPHCRAGFVQAVDPTDFSPDLPRPFV 42
           YWCYQCTRIV+V  A DA++CPHC  GF+Q VDPTDFSP+ PR FV
Sbjct: 18  YWCYQCTRIVTVAPAHDAILCPHCHGGFIQVVDPTDFSPEPPRRFV 63


>gb|KVI11957.1| protein of unknown function DUF1117 [Cynara cardunculus var.
           scolymus]
          Length = 354

 Score = 60.8 bits (146), Expect = 3e-08
 Identities = 24/44 (54%), Positives = 34/44 (77%)
 Frame = -3

Query: 176 YWCYQCTRIVSVLAEDAVVCPHCRAGFVQAVDPTDFSPDLPRPF 45
           YWCY+CTRIV ++ +DAVVCP+C   F++AVD +  +P+  RPF
Sbjct: 7   YWCYRCTRIVRIIPQDAVVCPYCHGEFIEAVDSS--TPESRRPF 48


>gb|KVI03626.1| protein of unknown function DUF1117 [Cynara cardunculus var.
           scolymus]
          Length = 383

 Score = 58.2 bits (139), Expect = 2e-07
 Identities = 22/38 (57%), Positives = 29/38 (76%)
 Frame = -3

Query: 176 YWCYQCTRIVSVLAEDAVVCPHCRAGFVQAVDPTDFSP 63
           YWCY+CTR V + AED VVCP+C  GFV+AV+ ++  P
Sbjct: 9   YWCYRCTRFVRLPAEDTVVCPYCEGGFVEAVEASEAPP 46


>ref|XP_008777326.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Phoenix
           dactylifera]
          Length = 372

 Score = 57.8 bits (138), Expect = 3e-07
 Identities = 22/32 (68%), Positives = 26/32 (81%)
 Frame = -3

Query: 176 YWCYQCTRIVSVLAEDAVVCPHCRAGFVQAVD 81
           YWCY+C+R V VL EDAVVCPHC  GF++ VD
Sbjct: 7   YWCYRCSRFVWVLPEDAVVCPHCEGGFLEEVD 38


>emb|CDP09090.1| unnamed protein product [Coffea canephora]
          Length = 384

 Score = 56.6 bits (135), Expect = 8e-07
 Identities = 24/44 (54%), Positives = 31/44 (70%), Gaps = 2/44 (4%)
 Frame = -3

Query: 176 YWCYQCTRIVSVLAEDAVVCPHCRAGFVQAVD--PTDFSPDLPR 51
           YWCY+CTR V V AE  VVCP+C +GF++A+D  P    P+ PR
Sbjct: 12  YWCYRCTRFVRVWAEHNVVCPYCDSGFIEALDSSPPSPLPEFPR 55


>ref|XP_015874028.1| PREDICTED: E3 ubiquitin-protein ligase RING1 [Ziziphus jujuba]
          Length = 379

 Score = 56.2 bits (134), Expect = 1e-06
 Identities = 21/44 (47%), Positives = 28/44 (63%)
 Frame = -3

Query: 176 YWCYQCTRIVSVLAEDAVVCPHCRAGFVQAVDPTDFSPDLPRPF 45
           YWCY+CTR V V  +D + CP+C  GFV+ +D +  S    RPF
Sbjct: 9   YWCYRCTRFVRVWVQDNITCPYCHTGFVEEIDASPPSESTRRPF 52


>ref|XP_002283212.1| PREDICTED: E3 ubiquitin-protein ligase RING1 [Vitis vinifera]
          Length = 388

 Score = 54.3 bits (129), Expect = 5e-06
 Identities = 20/44 (45%), Positives = 32/44 (72%)
 Frame = -3

Query: 176 YWCYQCTRIVSVLAEDAVVCPHCRAGFVQAVDPTDFSPDLPRPF 45
           YWC++CTR V V A+D++VCP+C +GF++ ++ T  S +  R F
Sbjct: 9   YWCHRCTRFVRVWAQDSIVCPYCESGFLEEIEATPRSENHHRRF 52


>emb|CAN72193.1| hypothetical protein VITISV_022309 [Vitis vinifera]
          Length = 1218

 Score = 54.3 bits (129), Expect = 6e-06
 Identities = 20/44 (45%), Positives = 32/44 (72%)
 Frame = -3

Query: 176 YWCYQCTRIVSVLAEDAVVCPHCRAGFVQAVDPTDFSPDLPRPF 45
           YWC++CTR V V A+D++VCP+C +GF++ ++ T  S +  R F
Sbjct: 119 YWCHRCTRFVRVWAQDSIVCPYCESGFLEEIEATPRSENHHRRF 162


>gb|KMZ57190.1| RING/U-box superfamily protein [Zostera marina]
          Length = 460

 Score = 53.9 bits (128), Expect = 7e-06
 Identities = 22/39 (56%), Positives = 28/39 (71%), Gaps = 1/39 (2%)
 Frame = -3

Query: 176 YWCYQCTRIVSVLAEDAVVCPHCRAGFVQAVD-PTDFSP 63
           YWCY+C R V+VL+ D VVCP C +GF++  D P  FSP
Sbjct: 17  YWCYRCIRFVTVLSGDGVVCPDCDSGFLEEADAPQSFSP 55


Top