BLASTX nr result
ID: Rehmannia28_contig00011197
seq
BLASTX 2.2.26 [Sep-21-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Rehmannia28_contig00011197 (939 letters) Database: ./nr 84,704,028 sequences; 31,038,470,784 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|KYP35691.1| Retrovirus-related Pol polyprotein from transposo... 254 3e-73 gb|KYP37030.1| Retrovirus-related Pol polyprotein from transposo... 254 3e-73 ref|XP_007010872.1| Uncharacterized protein TCM_044860 [Theobrom... 234 3e-70 gb|KYP34804.1| Retrovirus-related Pol polyprotein from transposo... 226 1e-68 gb|KYP78651.1| Retrovirus-related Pol polyprotein from transposo... 225 2e-68 gb|KYP68949.1| Retrovirus-related Pol polyprotein from transposo... 220 2e-67 gb|KYP77860.1| Retrovirus-related Pol polyprotein from transposo... 224 1e-66 gb|KYP58030.1| Retrovirus-related Pol polyprotein from transposo... 223 3e-66 gb|KYP59243.1| Copia protein [Cajanus cajan] 222 6e-66 emb|CAN74302.1| hypothetical protein VITISV_031363 [Vitis vinifera] 224 8e-66 gb|KYP32635.1| Retrovirus-related Pol polyprotein from transposo... 219 8e-66 emb|CAN70466.1| hypothetical protein VITISV_019286 [Vitis vinifera] 227 9e-66 gb|ABD32582.1| Integrase, catalytic region; Zinc finger, CCHC-ty... 233 1e-65 gb|KYP33754.1| Retrovirus-related Pol polyprotein from transposo... 229 5e-65 gb|KYP64004.1| Retrovirus-related Pol polyprotein from transposo... 229 6e-65 emb|CAN60490.1| hypothetical protein VITISV_030841 [Vitis vinifera] 229 1e-64 gb|KYP32507.1| Retrovirus-related Pol polyprotein from transposo... 222 1e-64 gb|KYP31061.1| Retrovirus-related Pol polyprotein from transposo... 217 2e-64 emb|CAN76317.1| hypothetical protein VITISV_012360 [Vitis vinifera] 229 2e-64 gb|KYP46031.1| Retrovirus-related Pol polyprotein from transposo... 225 2e-64 >gb|KYP35691.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan] gi|1012326694|gb|KYP38474.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan] Length = 1482 Score = 254 bits (650), Expect = 3e-73 Identities = 127/286 (44%), Positives = 172/286 (60%), Gaps = 1/286 (0%) Frame = -3 Query: 856 QEKSVKIQGSKGAKVIFGGNEAPGEIRGTGSIKKNGLE-ITDVAYVEGLNFNLLSISQLC 680 + K + +Q +G V +G N G I G+GS+ N I +V YVEGL +NLLSISQLC Sbjct: 488 KSKFISLQEKEGGSVTYGDNNK-GRILGSGSVGNNSNTLIENVLYVEGLKYNLLSISQLC 546 Query: 679 DKGYNVGFNMGVCQIKDAESNEIVLQGSRQKNMYVVDWSTATPSTCLLAKSTAESSWLWH 500 DK YN+ FN C + D ESNE++L G R N+Y++D ++ ++CL + +WLWH Sbjct: 547 DKNYNISFNNQCCMVCDKESNEVLLIGKRVNNIYILDLEHSSSNSCLTSHDNV--TWLWH 604 Query: 499 KKLSHLNFKTINKLARSHLVEGLPDSVYKKESICDACQMGKQIXXXXXXXXXXXSTRILH 320 ++++H+N +N+LA LV GLP + K+ +CDACQ GKQ ++R L Sbjct: 605 RRIAHINADQLNRLASKDLVSGLPKIKFSKQGLCDACQKGKQTRASFKSKKVMSTSRPLE 664 Query: 319 LLHMDLFGPVEPASISGKKYTLVVVDDYSRYTWTIFMCKKKETLQKLPQLMKRVQNEKSQ 140 LLHMDLFGP S+ G Y LV++DDYSR+TW F+ K + + KR+QNEK Sbjct: 665 LLHMDLFGPSRTKSLGGNTYALVLIDDYSRFTWVAFISHKDNAFKAFRIISKRIQNEKDL 724 Query: 139 TIIKIRSDRGTEFVNGIITQYCIENGIAHELSTARTPQQNGVAERR 2 I +RSD G EF N +C ENGI H S RTPQQNGV ER+ Sbjct: 725 KIKSLRSDHGGEFQNESFQTFCEENGINHNFSVPRTPQQNGVVERK 770 >gb|KYP37030.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan] gi|1012344001|gb|KYP55193.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan] Length = 1530 Score = 254 bits (650), Expect = 3e-73 Identities = 127/286 (44%), Positives = 172/286 (60%), Gaps = 1/286 (0%) Frame = -3 Query: 856 QEKSVKIQGSKGAKVIFGGNEAPGEIRGTGSIKKNGLE-ITDVAYVEGLNFNLLSISQLC 680 + K + +Q +G V +G N G I G+GS+ N I +V YVEGL +NLLSISQLC Sbjct: 536 KSKFISLQEKEGGSVTYGDNNK-GRILGSGSVGNNSNTLIENVLYVEGLKYNLLSISQLC 594 Query: 679 DKGYNVGFNMGVCQIKDAESNEIVLQGSRQKNMYVVDWSTATPSTCLLAKSTAESSWLWH 500 DK YN+ FN C + D ESNE++L G R N+Y++D ++ ++CL + +WLWH Sbjct: 595 DKNYNISFNNQCCMVCDKESNEVLLIGKRVNNIYILDLEHSSSNSCLTSHDNV--TWLWH 652 Query: 499 KKLSHLNFKTINKLARSHLVEGLPDSVYKKESICDACQMGKQIXXXXXXXXXXXSTRILH 320 ++++H+N +N+LA LV GLP + K+ +CDACQ GKQ ++R L Sbjct: 653 RRIAHINADQLNRLASKDLVSGLPKIKFSKQGLCDACQKGKQTRASFKSKKVMSTSRPLE 712 Query: 319 LLHMDLFGPVEPASISGKKYTLVVVDDYSRYTWTIFMCKKKETLQKLPQLMKRVQNEKSQ 140 LLHMDLFGP S+ G Y LV++DDYSR+TW F+ K + + KR+QNEK Sbjct: 713 LLHMDLFGPSRTKSLGGNTYALVLIDDYSRFTWVAFISHKDNAFKAFRIISKRIQNEKDL 772 Query: 139 TIIKIRSDRGTEFVNGIITQYCIENGIAHELSTARTPQQNGVAERR 2 I +RSD G EF N +C ENGI H S RTPQQNGV ER+ Sbjct: 773 KIKSLRSDHGGEFQNESFQTFCEENGINHNFSVPRTPQQNGVVERK 818 >ref|XP_007010872.1| Uncharacterized protein TCM_044860 [Theobroma cacao] gi|508727785|gb|EOY19682.1| Uncharacterized protein TCM_044860 [Theobroma cacao] Length = 505 Score = 234 bits (598), Expect = 3e-70 Identities = 119/278 (42%), Positives = 170/278 (61%), Gaps = 3/278 (1%) Frame = -3 Query: 826 KGAKVIFGGNEAPGEIRGTGSIKKNG-LEITDVAYVEGLNFNLLSISQLCDKGYNVGFNM 650 KG + FG +++ G I G G++ KN +I+ V V+GL N LSISQLCDKG V F+ Sbjct: 15 KGRTISFG-DDSKGRIHGIGTVGKNSQTQISHVLLVKGLKHNFLSISQLCDKGLRVCFDS 73 Query: 649 GVCQIKDAESNEIVLQGSRQKNMYVV--DWSTATPSTCLLAKSTAESSWLWHKKLSHLNF 476 C++ D +N+I G+R KNM+V+ + CL+A + +S WLWH++L H++ Sbjct: 74 TKCEVIDMSTNKISFIGNRLKNMHVIFLEVLKVNSEVCLIANAENDS-WLWHRRLGHVSM 132 Query: 475 KTINKLARSHLVEGLPDSVYKKESICDACQMGKQIXXXXXXXXXXXSTRILHLLHMDLFG 296 T++KL + +L+ GL + ++ + ICDACQ+GKQ+ ++R L LLH+DLFG Sbjct: 133 NTMSKLIKKNLITGLLELKFENDRICDACQLGKQVRTSFKSKKIVSTSRPLELLHIDLFG 192 Query: 295 PVEPASISGKKYTLVVVDDYSRYTWTIFMCKKKETLQKLPQLMKRVQNEKSQTIIKIRSD 116 P+ S+ GK Y V+VDDYSRYTW F+ K LQ K+V+NEK I+ I+SD Sbjct: 193 PISTTSLGGKSYGFVIVDDYSRYTWVYFLAHKNAALQAFLSHYKKVENEKGLAIVSIKSD 252 Query: 115 RGTEFVNGIITQYCIENGIAHELSTARTPQQNGVAERR 2 G EF N ++C E G+ H S RTPQQNGV ER+ Sbjct: 253 HGGEFENDEFEKFCNEKGLDHNCSAPRTPQQNGVVERK 290 >gb|KYP34804.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial [Cajanus cajan] Length = 364 Score = 226 bits (577), Expect = 1e-68 Identities = 127/295 (43%), Positives = 173/295 (58%), Gaps = 5/295 (1%) Frame = -3 Query: 871 TYDRKQEKSVKIQGSKGAKVIFGGNEAPGEIRGTGSIKKNG--LEITDVAYVEGLNFNLL 698 T D + S+K++ V +G N G I G G+I + I +V VEGL NLL Sbjct: 12 TGDPSKFSSLKLKNE--GFVTYGDNNK-GRILGHGNIGNSSSLTLIENVLLVEGLKHNLL 68 Query: 697 SISQLCDKGYNVGFNMGVCQIKDAESNEIVLQGSRQKNMYVVDW--STATPST-CLLAKS 527 SISQL DKG+ + F+ C I D ++ EI G R N+Y++D S A +T CL+ K Sbjct: 69 SISQLSDKGFKIEFDNTCCLICDKKTKEIRFNGKRIDNIYMLDLEHSIAISNTMCLITKE 128 Query: 526 TAESSWLWHKKLSHLNFKTINKLARSHLVEGLPDSVYKKESICDACQMGKQIXXXXXXXX 347 ++ WLWH++ +H++ +NKL+R LV GLP + K+ +CDACQ GKQ+ Sbjct: 129 --DNIWLWHRRAAHIHMDHLNKLSRKELVIGLPKLKFSKDKLCDACQKGKQVKARFKSKN 186 Query: 346 XXXSTRILHLLHMDLFGPVEPASISGKKYTLVVVDDYSRYTWTIFMCKKKETLQKLPQLM 167 +TR L L+HMDLFGP S+SG Y LV+VDDYSR+TW +F+ K E + + Sbjct: 187 HISTTRPLQLIHMDLFGPSRTMSLSGNYYGLVIVDDYSRFTWVMFLASKNEAFNAIKKFS 246 Query: 166 KRVQNEKSQTIIKIRSDRGTEFVNGIITQYCIENGIAHELSTARTPQQNGVAERR 2 K QNEK+ I IRSD G EF N + ++C E+GI H S RTPQQNGV ER+ Sbjct: 247 KLFQNEKNTNITSIRSDHGDEFQNILFQKFCEEHGINHNFSAPRTPQQNGVVERK 301 >gb|KYP78651.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan] Length = 348 Score = 225 bits (574), Expect = 2e-68 Identities = 119/272 (43%), Positives = 163/272 (59%), Gaps = 5/272 (1%) Frame = -3 Query: 802 GNEAPGEIRGTGSIKKNGLE--ITDVAYVEGLNFNLLSISQLCDKGYNVGFNMGVCQIKD 629 G+ G+I G G+I + I +V VEGL NLLSISQL DKG+ + F+ C I D Sbjct: 22 GDNNKGKILGHGNIGNSSSSTLIENVLLVEGLKHNLLSISQLSDKGFKIEFDNTCCLICD 81 Query: 628 AESNEIVLQGSRQKNMYVVDWS---TATPSTCLLAKSTAESSWLWHKKLSHLNFKTINKL 458 + EI G R N+Y++D T + + CL+ K E+ WLWH++ +H++ +NKL Sbjct: 82 KLTKEIRFIGKRIDNIYMLDLEHSITISNTKCLITKE--ENIWLWHRRAAHIHMDHLNKL 139 Query: 457 ARSHLVEGLPDSVYKKESICDACQMGKQIXXXXXXXXXXXSTRILHLLHMDLFGPVEPAS 278 +R LV GLP + K+ +CDACQ GKQ+ ++R L L+HMDLFGP+ S Sbjct: 140 SRKELVIGLPKLKFSKDKLCDACQKGKQVKASFKSKNQISTSRPLQLIHMDLFGPLRTMS 199 Query: 277 ISGKKYTLVVVDDYSRYTWTIFMCKKKETLQKLPQLMKRVQNEKSQTIIKIRSDRGTEFV 98 + G Y LV++DDYSR+TW +F+ K E + K VQNEK+ I IRSD G EF Sbjct: 200 LGGNYYGLVILDDYSRFTWVMFLAYKSEAFNAFKKFAKLVQNEKNINITSIRSDHGGEFQ 259 Query: 97 NGIITQYCIENGIAHELSTARTPQQNGVAERR 2 N + ++C E+GI H ST RTPQQNGV ER+ Sbjct: 260 NVLFRKFCEEHGINHNFSTPRTPQQNGVVERK 291 >gb|KYP68949.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial [Cajanus cajan] Length = 267 Score = 220 bits (561), Expect = 2e-67 Identities = 111/247 (44%), Positives = 151/247 (61%), Gaps = 1/247 (0%) Frame = -3 Query: 742 ITDVAYVEGLNFNLLSISQLCDKGYNVGFNMGVCQIKDAESNEIVLQGSRQKNMYVVDW- 566 I +V VEGL +LLS+SQLCDKG++V F+ C I+ + + G R N+Y + Sbjct: 1 IENVLLVEGLKHSLLSVSQLCDKGFSVSFDSQKCLIEHKNDKNVKIVGFRVNNVYKIKIE 60 Query: 565 STATPSTCLLAKSTAESSWLWHKKLSHLNFKTINKLARSHLVEGLPDSVYKKESICDACQ 386 + + S CL++K+ + SWLWHK+++H+N + +NKL LV GLP ++K +CDACQ Sbjct: 61 NNSNHSQCLMSKN--DESWLWHKRIAHINMEHLNKLISKDLVIGLPKIKFEKNKLCDACQ 118 Query: 385 MGKQIXXXXXXXXXXXSTRILHLLHMDLFGPVEPASISGKKYTLVVVDDYSRYTWTIFMC 206 GKQ+ ++R L LLHMDLFGP S G Y LV+VDD+SRYTWT+F+ Sbjct: 119 KGKQVKVSFKPNNIVTTSRPLKLLHMDLFGPSRTMSFGGSYYGLVLVDDFSRYTWTLFLA 178 Query: 205 KKKETLQKLPQLMKRVQNEKSQTIIKIRSDRGTEFVNGIITQYCIENGIAHELSTARTPQ 26 K +T + K +QN+K+ I+ IRSD G EF N +C ENGI H S RTPQ Sbjct: 179 HKSDTFGVFGKFAKLIQNKKNLKIVSIRSDHGKEFENKDFDLFCEENGIEHNFSAPRTPQ 238 Query: 25 QNGVAER 5 QNGV ER Sbjct: 239 QNGVVER 245 >gb|KYP77860.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan] Length = 455 Score = 224 bits (571), Expect = 1e-66 Identities = 119/275 (43%), Positives = 161/275 (58%), Gaps = 2/275 (0%) Frame = -3 Query: 826 KGAKVIFGGNEAPGEIRGTGSIKKN-GLEITDVAYVEGLNFNLLSISQLCDKGYNVGFNM 650 K +K I G+ G+I GTG++ + I DV YVEGL +NLLSISQLCDK +NV FN Sbjct: 14 KESKTITYGDNNKGKILGTGTVGNSYNTLIEDVLYVEGLKYNLLSISQLCDKNFNVSFNN 73 Query: 649 GVCQIKDAESNEIVLQGSRQKNMYVVDW-STATPSTCLLAKSTAESSWLWHKKLSHLNFK 473 C + D +NE + G R N+Y++ + A+ TCL S + +WLWH+++SHLN Sbjct: 74 ECCLVCDKSTNETLFIGKRINNIYILHLVNNASNITCL--SSIDDLTWLWHRRISHLNLD 131 Query: 472 TINKLARSHLVEGLPDSVYKKESICDACQMGKQIXXXXXXXXXXXSTRILHLLHMDLFGP 293 +N+LA +LVEGLP + KE +CDA Q GKQ ++R+L LLHMDLFGP Sbjct: 132 QLNRLASKNLVEGLPKIKFLKEGLCDAYQNGKQSRIYFKNKKIVSTSRLLELLHMDLFGP 191 Query: 292 VEPASISGKKYTLVVVDDYSRYTWTIFMCKKKETLQKLPQLMKRVQNEKSQTIIKIRSDR 113 S+ G Y V++DD+SR+TW F+ K + + KR+QNE I +RS Sbjct: 192 SRTMSLGGNTYGFVIIDDFSRFTWVAFLSHKYNAFKNFKIIAKRIQNENDLEIKSLRSQH 251 Query: 112 GTEFVNGIITQYCIENGIAHELSTARTPQQNGVAE 8 G EF N +C ++GI ST RTPQQN V E Sbjct: 252 GCEFQNEKFQTFCEKHGINQNFSTPRTPQQNRVVE 286 >gb|KYP58030.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial [Cajanus cajan] Length = 446 Score = 223 bits (567), Expect = 3e-66 Identities = 121/295 (41%), Positives = 171/295 (57%), Gaps = 5/295 (1%) Frame = -3 Query: 871 TYDRKQEKSVKIQGSKGAKVIFGGNEAPGEIRGTGSIKKNGLE--ITDVAYVEGLNFNLL 698 T D + S+K++ V +G N G I G G++ + + I +V V+GL NLL Sbjct: 12 TEDPSKFSSLKLKNE--GHVTYGDNNK-GRILGHGNVGNSSSQTLIENVLLVDGLKHNLL 68 Query: 697 SISQLCDKGYNVGFNMGVCQIKDAESNEIVLQGSRQKNMYVVDWSTA---TPSTCLLAKS 527 SISQL DKG+ + F+ C I D ++ EI G R N+Y++D + + + CL+ + Sbjct: 69 SISQLSDKGFKIEFDNTCCLICDKKTKEIRFIGKRIDNIYMLDLENSIAISNTKCLITQE 128 Query: 526 TAESSWLWHKKLSHLNFKTINKLARSHLVEGLPDSVYKKESICDACQMGKQIXXXXXXXX 347 ++ WLWH++ +H++ +NKL+R LV LP + K+ +CDACQ GKQ+ Sbjct: 129 --DNIWLWHRRAAHIHMDHLNKLSRKELVVELPKLKFSKDKLCDACQKGKQVKASFKSKN 186 Query: 346 XXXSTRILHLLHMDLFGPVEPASISGKKYTLVVVDDYSRYTWTIFMCKKKETLQKLPQLM 167 +TR L L+HMDLFGP S+ G Y LV+VDDYSRYTW +F+ K + + Sbjct: 187 QISTTRPLQLIHMDLFGPSRTMSLGGNYYGLVIVDDYSRYTWVMFLANKNDAFNAFRKFA 246 Query: 166 KRVQNEKSQTIIKIRSDRGTEFVNGIITQYCIENGIAHELSTARTPQQNGVAERR 2 K VQNEKS I IRSD G EF N + ++C E+GI H S RTPQQNGV ER+ Sbjct: 247 KLVQNEKSSNITSIRSDHGGEFQNIMFQKFCEEHGINHNFSAPRTPQQNGVVERK 301 >gb|KYP59243.1| Copia protein [Cajanus cajan] Length = 445 Score = 222 bits (565), Expect = 6e-66 Identities = 116/283 (40%), Positives = 164/283 (57%), Gaps = 2/283 (0%) Frame = -3 Query: 844 VKIQGSKGAKVIFGGNEAPGEIRGTGSIKKN-GLEITDVAYVEGLNFNLLSISQLCDKGY 668 + + + V +G N +I G I N +V VEGL +LLS+SQLCDKG+ Sbjct: 9 IDLTPKRSGHVTYGDNNRE-KILGIEKIGTNFSTSKENVLLVEGLKHSLLSVSQLCDKGF 67 Query: 667 NVGFNMGVCQIKDAESNEIVLQGSRQKNMYVVDW-STATPSTCLLAKSTAESSWLWHKKL 491 ++ F+ C I+ + ++ + G R N+Y + + S CL++K+ + SWLWHK++ Sbjct: 68 SISFDSQKCLIEHKDDKQVKIVGFRINNVYKIRIENNPKHSQCLMSKN--DESWLWHKRI 125 Query: 490 SHLNFKTINKLARSHLVEGLPDSVYKKESICDACQMGKQIXXXXXXXXXXXSTRILHLLH 311 +H+N + +NKL +LV GLP ++K +CD CQ GKQ+ +TR L LLH Sbjct: 126 AHINMEHLNKLISKNLVIGLPKIKFEKNKLCDVCQKGKQVKISFKSKNIVTTTRPLELLH 185 Query: 310 MDLFGPVEPASISGKKYTLVVVDDYSRYTWTIFMCKKKETLQKLPQLMKRVQNEKSQTII 131 MDLFGP S G Y LV+VDD+SRYTWT+F+ K +T + K +QN+K+ I+ Sbjct: 186 MDLFGPSRTMSFGGSYYGLVLVDDFSRYTWTLFLANKSDTFSVFRKFAKLIQNKKNLKIV 245 Query: 130 KIRSDRGTEFVNGIITQYCIENGIAHELSTARTPQQNGVAERR 2 IRSD G EF N +C ENGI H S RTPQQNGV ER+ Sbjct: 246 SIRSDHGKEFENKDFDLFCEENGIEHNFSAPRTPQQNGVVERK 288 >emb|CAN74302.1| hypothetical protein VITISV_031363 [Vitis vinifera] Length = 556 Score = 224 bits (572), Expect = 8e-66 Identities = 125/277 (45%), Positives = 160/277 (57%), Gaps = 2/277 (0%) Frame = -3 Query: 826 KGAKVIFGGNEAPGEIRGTGSIKKNGLE--ITDVAYVEGLNFNLLSISQLCDKGYNVGFN 653 KG V FG NE G I G +I NG I V V+GL NLLSISQLCDKG+ V F Sbjct: 155 KGGYVTFGDNEK-GRIIGQDNIG-NGTSSLIESVLLVDGLKHNLLSISQLCDKGFKVIFE 212 Query: 652 MGVCQIKDAESNEIVLQGSRQKNMYVVDWSTATPSTCLLAKSTAESSWLWHKKLSHLNFK 473 C IKD ++++ + G R N+Y ++ S + S + SWLWH++L H N Sbjct: 213 ASHCIIKDIQNDKTIFMGXRCDNVYAINISKYDGHDRCFS-SMHDQSWLWHRRLGHANMD 271 Query: 472 TINKLARSHLVEGLPDSVYKKESICDACQMGKQIXXXXXXXXXXXSTRILHLLHMDLFGP 293 I++L + LV GLP ++K+ +C+ CQMGKQI +TR L LLHMDLFGP Sbjct: 272 LISQLNKDELVRGLPKINFQKDKVCEXCQMGKQIKNSFKNKXFISTTRPLELLHMDLFGP 331 Query: 292 VEPASISGKKYTLVVVDDYSRYTWTIFMCKKKETLQKLPQLMKRVQNEKSQTIIKIRSDR 113 S+ GK Y +VDD+SRYTW F+ +K E ++ + +VQNEK TI IRS Sbjct: 332 SRTPSLGGKSYAFFIVDDFSRYTWVFFLSQKNEAFYEVSKFCNKVQNEKGFTITCIRSYH 391 Query: 112 GTEFVNGIITQYCIENGIAHELSTARTPQQNGVAERR 2 G EF N YC E+GI H S RTPQQNGV ER+ Sbjct: 392 GREFQNIDFEDYCNEHGINHNFSAPRTPQQNGVVERK 428 >gb|KYP32635.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial [Cajanus cajan] Length = 375 Score = 219 bits (559), Expect = 8e-66 Identities = 125/295 (42%), Positives = 171/295 (57%), Gaps = 5/295 (1%) Frame = -3 Query: 871 TYDRKQEKSVKIQGSKGAKVIFGGNEAPGEIRGTGSIKKNG--LEITDVAYVEGLNFNLL 698 T D + S+K++ V +G N G I G G+I + I +V VEGL NLL Sbjct: 12 TGDPSKFSSLKLKNE--GNVTYGDNNK-GRILGHGNIGNSSSLTLIENVLLVEGLKHNLL 68 Query: 697 SISQLCDKGYNVGFNMGVCQIKDAESNEIVLQGSRQKNMYVVDW--STATPST-CLLAKS 527 SISQL DKG+ + F+ C I D ++ EI G R N+Y++D S A +T CL+ K Sbjct: 69 SISQLSDKGFKIEFDNTCCLICDKKTKEIRFIGKRIDNIYMLDLEHSIAISNTKCLITKE 128 Query: 526 TAESSWLWHKKLSHLNFKTINKLARSHLVEGLPDSVYKKESICDACQMGKQIXXXXXXXX 347 ++ WLWH++ +H++ +NKL+R LV GLP + K+ +CDACQ GKQ+ Sbjct: 129 --DNIWLWHRRAAHIHMDHLNKLSRKELVIGLPKLKFSKDKLCDACQKGKQVKASFKRKN 186 Query: 346 XXXSTRILHLLHMDLFGPVEPASISGKKYTLVVVDDYSRYTWTIFMCKKKETLQKLPQLM 167 +TR L L+HMDLFG S+ G Y LV+VDDYSR+TW +F+ K E + Sbjct: 187 QISTTRPLQLIHMDLFGFSRTRSLGGNYYGLVIVDDYSRFTWVMFLVNKNEAFNAFKKFS 246 Query: 166 KRVQNEKSQTIIKIRSDRGTEFVNGIITQYCIENGIAHELSTARTPQQNGVAERR 2 K VQNEK+ I IRSD G EF + ++C E+GI+H S RTPQQNGV ER+ Sbjct: 247 KLVQNEKNLNITSIRSDHGGEFQKILFQKFCEEHGISHNFSAPRTPQQNGVVERK 301 >emb|CAN70466.1| hypothetical protein VITISV_019286 [Vitis vinifera] Length = 689 Score = 227 bits (579), Expect = 9e-66 Identities = 126/289 (43%), Positives = 164/289 (56%), Gaps = 2/289 (0%) Frame = -3 Query: 862 RKQEKSVKIQGSKGAKVIFGGNEAPGEIRGTGSIKKNGLE--ITDVAYVEGLNFNLLSIS 689 R + K + KG V FG N + G I G +I NG I V V+ L NLLSIS Sbjct: 3 RDESKFAFLTKRKGGYVTFGDN-SKGRIIGQDNIG-NGTSSLIESVLLVDSLKHNLLSIS 60 Query: 688 QLCDKGYNVGFNMGVCQIKDAESNEIVLQGSRQKNMYVVDWSTATPSTCLLAKSTAESSW 509 QLCDK + V F C IKD ++++ + G R N+Y ++ S + S + SW Sbjct: 61 QLCDKCFKVIFETSHCIIKDIQNDKTIFMGHRCDNVYAINISKYDGHDRCFS-SMHDQSW 119 Query: 508 LWHKKLSHLNFKTINKLARSHLVEGLPDSVYKKESICDACQMGKQIXXXXXXXXXXXSTR 329 LWH++L H N I++L + LV GLP ++K +C+ACQMGKQI +TR Sbjct: 120 LWHRRLGHANMDLISQLNKDELVRGLPKINFQKHKVCEACQMGKQIKNSFKNKNFFSTTR 179 Query: 328 ILHLLHMDLFGPVEPASISGKKYTLVVVDDYSRYTWTIFMCKKKETLQKLPQLMKRVQNE 149 L LLHMDLFGP S+ GK Y V+VDD+SRYTW +F+ +K ET + + ++QNE Sbjct: 180 PLELLHMDLFGPPRTPSLGGKSYAFVIVDDFSRYTWVLFLSQKNETFYEFSKFCNKIQNE 239 Query: 148 KSQTIIKIRSDRGTEFVNGIITQYCIENGIAHELSTARTPQQNGVAERR 2 K TI IRSD G EF N YC E+GI H S RTPQQNGV ER+ Sbjct: 240 KGFTITCIRSDHGREFENIDFEDYCNEHGINHNFSALRTPQQNGVVERK 288 >gb|ABD32582.1| Integrase, catalytic region; Zinc finger, CCHC-type; Peptidase aspartic, catalytic [Medicago truncatula] Length = 1715 Score = 233 bits (593), Expect = 1e-65 Identities = 115/274 (41%), Positives = 168/274 (61%) Frame = -3 Query: 823 GAKVIFGGNEAPGEIRGTGSIKKNGLEITDVAYVEGLNFNLLSISQLCDKGYNVGFNMGV 644 G +V FGGN+ G+I GTG+I + + I +V V+GL NLLSISQ CD GY+V F+ Sbjct: 695 GGEVKFGGNQT-GKIIGTGTIGNSSISINNVWLVDGLKHNLLSISQFCDNGYDVTFSKTN 753 Query: 643 CQIKDAESNEIVLQGSRQKNMYVVDWSTATPSTCLLAKSTAESSWLWHKKLSHLNFKTIN 464 C + + + I +G R +N+Y +++S + S + W+WHK+L H N++ I+ Sbjct: 754 CTLVNKDDKSITFKGKRVENVYKINFSDLADQKVVCLLSMNDKKWVWHKRLGHANWRLIS 813 Query: 463 KLARSHLVEGLPDSVYKKESICDACQMGKQIXXXXXXXXXXXSTRILHLLHMDLFGPVEP 284 K+++ LV+GLP+ Y +++C ACQ GK + ++R L LLH+DLFGPV Sbjct: 814 KISKLQLVKGLPNIDYHSDALCGACQKGKIVKSSFKSKDIVSTSRPLELLHIDLFGPVNT 873 Query: 283 ASISGKKYTLVVVDDYSRYTWTIFMCKKKETLQKLPQLMKRVQNEKSQTIIKIRSDRGTE 104 AS+ G KY LV+VDDYSR+TW F+ K + ++Q+EK I+K+RSD G E Sbjct: 874 ASLYGSKYGLVIVDDYSRWTWVKFIKSKDYACEVFSSFCTQIQSEKELKILKVRSDHGGE 933 Query: 103 FVNGIITQYCIENGIAHELSTARTPQQNGVAERR 2 F N +C ++GI HE S+ RTPQQNGV ER+ Sbjct: 934 FENEPFELFCEKHGILHEFSSPRTPQQNGVVERK 967 >gb|KYP33754.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan] Length = 1011 Score = 229 bits (585), Expect = 5e-65 Identities = 121/285 (42%), Positives = 166/285 (58%), Gaps = 2/285 (0%) Frame = -3 Query: 850 KSVKIQGSKGAKVIFGGNEAPGEIRGTGSIKKN-GLEITDVAYVEGLNFNLLSISQLCDK 674 K + + V +G N G+I G G I N I +V V+GL +LLS+SQLCDK Sbjct: 7 KFIDFTPKRSGHVTYGDNNR-GKILGIGKIGTNFSTSIENVLLVDGLKHSLLSVSQLCDK 65 Query: 673 GYNVGFNMGVCQIKDAESNEIVLQGSRQKNMYVVDW-STATPSTCLLAKSTAESSWLWHK 497 G++V F+ C I+ ++ + G R N+Y + + S CL++K+ + SWLWHK Sbjct: 66 GFSVSFDSQKCLIEHKNDKQVKIVGFRINNVYKIKIENNPKHSQCLMSKN--DESWLWHK 123 Query: 496 KLSHLNFKTINKLARSHLVEGLPDSVYKKESICDACQMGKQIXXXXXXXXXXXSTRILHL 317 +++H+N + +NKL LV GLP ++K +CDACQ GKQ+ +TR L L Sbjct: 124 RIAHINMEHLNKLISKDLVIGLPKIKFEKNKLCDACQKGKQVKVSFKPKNIVTTTRPLEL 183 Query: 316 LHMDLFGPVEPASISGKKYTLVVVDDYSRYTWTIFMCKKKETLQKLPQLMKRVQNEKSQT 137 LHMDLFGP S G Y LV+VDD+SRYTWT+F+ K +T + K +QN+K+ Sbjct: 184 LHMDLFGPSRTMSFGGSYYGLVLVDDFSRYTWTLFLANKSDTFGVFRKFAKLIQNKKNLK 243 Query: 136 IIKIRSDRGTEFVNGIITQYCIENGIAHELSTARTPQQNGVAERR 2 I+ IRSD G EF N +C ENGI H S RTPQQNGV ER+ Sbjct: 244 IVSIRSDHGKEFENKDFDLFCEENGIEHNFSAPRTPQQNGVVERK 288 >gb|KYP64004.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial [Cajanus cajan] Length = 1021 Score = 229 bits (585), Expect = 6e-65 Identities = 121/285 (42%), Positives = 166/285 (58%), Gaps = 2/285 (0%) Frame = -3 Query: 850 KSVKIQGSKGAKVIFGGNEAPGEIRGTGSIKKN-GLEITDVAYVEGLNFNLLSISQLCDK 674 K + + V +G N G+I G G I N I +V V+GL +LLS+SQLCDK Sbjct: 17 KFIDFTPKRSGHVTYGDNNR-GKILGIGKIGTNFSTSIENVLLVDGLKHSLLSVSQLCDK 75 Query: 673 GYNVGFNMGVCQIKDAESNEIVLQGSRQKNMYVVDW-STATPSTCLLAKSTAESSWLWHK 497 G++V F+ C I+ ++ + G R N+Y + + S CL++K+ + SWLWHK Sbjct: 76 GFSVSFDSQKCLIEHKNDKQVKIVGFRINNVYKIKIENNPKHSQCLMSKN--DESWLWHK 133 Query: 496 KLSHLNFKTINKLARSHLVEGLPDSVYKKESICDACQMGKQIXXXXXXXXXXXSTRILHL 317 +++H+N + +NKL LV GLP ++K +CDACQ GKQ+ +TR L L Sbjct: 134 RIAHINMEHLNKLISKDLVIGLPKIKFEKNKLCDACQKGKQVKVSFKPKNIVTTTRPLEL 193 Query: 316 LHMDLFGPVEPASISGKKYTLVVVDDYSRYTWTIFMCKKKETLQKLPQLMKRVQNEKSQT 137 LHMDLFGP S G Y LV+VDD+SRYTWT+F+ K +T + K +QN+K+ Sbjct: 194 LHMDLFGPSRTMSFGGSYYGLVLVDDFSRYTWTLFLANKSDTFGVFRKFAKLIQNKKNLK 253 Query: 136 IIKIRSDRGTEFVNGIITQYCIENGIAHELSTARTPQQNGVAERR 2 I+ IRSD G EF N +C ENGI H S RTPQQNGV ER+ Sbjct: 254 IVSIRSDHGKEFENKDFDLFCEENGIEHNFSAPRTPQQNGVVERK 298 >emb|CAN60490.1| hypothetical protein VITISV_030841 [Vitis vinifera] Length = 1000 Score = 229 bits (583), Expect = 1e-64 Identities = 125/277 (45%), Positives = 165/277 (59%), Gaps = 2/277 (0%) Frame = -3 Query: 826 KGAKVIFGGNEAPGEIRGTGSIKKNGLE--ITDVAYVEGLNFNLLSISQLCDKGYNVGFN 653 KG V FG N A G I G G+I NG I V V+GL NLLSISQLCDKG+ V F Sbjct: 557 KGGYVTFGDN-AKGRIIGQGNIG-NGTSSLIESVLLVDGLKHNLLSISQLCDKGFKVIFE 614 Query: 652 MGVCQIKDAESNEIVLQGSRQKNMYVVDWSTATPSTCLLAKSTAESSWLWHKKLSHLNFK 473 C IKD ++N+ + G R +N+Y ++ S + S + SWLWH++L H N Sbjct: 615 ASHCIIKDIQNNKTIFMGHRCENVYGINISKYDGHDRCFS-SMHDQSWLWHRRLGHANMD 673 Query: 472 TINKLARSHLVEGLPDSVYKKESICDACQMGKQIXXXXXXXXXXXSTRILHLLHMDLFGP 293 I++L + LV GLP + ++K+ + +ACQMGKQI ++R L LLHMDLFGP Sbjct: 674 LISQLNKDELVRGLPKTNFQKDKVYEACQMGKQIKNTFKNKNFISTSRPLELLHMDLFGP 733 Query: 292 VEPASISGKKYTLVVVDDYSRYTWTIFMCKKKETLQKLPQLMKRVQNEKSQTIIKIRSDR 113 S+ GK Y V+VDD+SRYTW +F+ +K E + + +VQN+K TI IRSD Sbjct: 734 SRTPSLRGKSYAYVIVDDFSRYTWVLFLSQKSEAFYEFSKFCNKVQNKKGFTITCIRSDH 793 Query: 112 GTEFVNGIITQYCIENGIAHELSTARTPQQNGVAERR 2 G EF N +YC ++GI H S RTPQQNGV ER+ Sbjct: 794 GREFENFDFEEYCNKHGINHNFSALRTPQQNGVVERK 830 >gb|KYP32507.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan] Length = 588 Score = 222 bits (566), Expect = 1e-64 Identities = 122/295 (41%), Positives = 171/295 (57%), Gaps = 5/295 (1%) Frame = -3 Query: 871 TYDRKQEKSVKIQGSKGAKVIFGGNEAPGEIRGTGSIKKNGLE--ITDVAYVEGLNFNLL 698 T D + S+K++ V +G N G+I G G++ + I +V V+GL NLL Sbjct: 2 TGDPSKFSSLKLKNE--GYVTYGDNNK-GKILGHGNVGNPSSQTLIENVLLVDGLKHNLL 58 Query: 697 SISQLCDKGYNVGFNMGVCQIKDAESNEIVLQGSRQKNMYVVDWS---TATPSTCLLAKS 527 SISQL DKG+ + F+ C I D +S EI G R N+Y++D T + + CL+ + Sbjct: 59 SISQLSDKGFKIEFDNTCCLICDKKSKEIRFIGKRIDNIYMLDLEHSITMSNTKCLITQE 118 Query: 526 TAESSWLWHKKLSHLNFKTINKLARSHLVEGLPDSVYKKESICDACQMGKQIXXXXXXXX 347 E+ WLWH++ +H++ +NKL+R LV GLP + K+ +CDACQ GKQ+ Sbjct: 119 --ENIWLWHRRAAHIHMDHLNKLSRKELVVGLPKLKFGKDKLCDACQKGKQVKASFKSKN 176 Query: 346 XXXSTRILHLLHMDLFGPVEPASISGKKYTLVVVDDYSRYTWTIFMCKKKETLQKLPQLM 167 ++R L L+HMDLFGP S+ G Y LV+V+DYSRYTW +F+ K + + Sbjct: 177 QISTSRPLQLIHMDLFGPSRTMSLGGNYYDLVIVEDYSRYTWVMFLTNKNDAFNAFRKFA 236 Query: 166 KRVQNEKSQTIIKIRSDRGTEFVNGIITQYCIENGIAHELSTARTPQQNGVAERR 2 K VQNEK I IRSD G EF N + ++C E+GI H S RTPQQNGV ER+ Sbjct: 237 KLVQNEKCSNITSIRSDHGGEFQNMMFRKFCEEHGINHNFSAPRTPQQNGVVERK 291 >gb|KYP31061.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan] Length = 413 Score = 217 bits (553), Expect = 2e-64 Identities = 125/295 (42%), Positives = 172/295 (58%), Gaps = 5/295 (1%) Frame = -3 Query: 871 TYDRKQEKSVKIQGSKGAKVIFGGNEAPGEIRGTGSIKKNGLE--ITDVAYVEGLNFNLL 698 T D + S+K++ V +G N G+I G G+I + I +V VEGL NLL Sbjct: 2 TGDPSKFSSMKLKNE--GFVTYGDNNK-GKILGHGNIGNSSSSTLIENVLLVEGLKHNLL 58 Query: 697 SISQLCDKGYNVGFNMGVCQIKDAESNEIVLQGSRQKNMYVV--DWSTATPST-CLLAKS 527 SISQL DKG+ + F+ C I D + EI G R N+Y++ + S T +T CL+ K Sbjct: 59 SISQLSDKGFKIEFDNTCCLIYDKLTKEIRFIGKRIDNIYMLYLEHSITTSNTKCLITKE 118 Query: 526 TAESSWLWHKKLSHLNFKTINKLARSHLVEGLPDSVYKKESICDACQMGKQIXXXXXXXX 347 ++ W+WH++ +H++ +NKL+R LV LP + K+ +CDACQ GKQ+ Sbjct: 119 --DNIWIWHRRAAHIDMDHLNKLSRKELVIVLPKLKFSKDKLCDACQKGKQVNTSFKSKN 176 Query: 346 XXXSTRILHLLHMDLFGPVEPASISGKKYTLVVVDDYSRYTWTIFMCKKKETLQKLPQLM 167 ++R L L+HMDLFGP SI G Y LV+VDDYSR+TW +F+ K E + Sbjct: 177 QISTSRPLQLIHMDLFGPSRTISIGGNYYGLVIVDDYSRFTWVMFLENKIEAFNGFKKFA 236 Query: 166 KRVQNEKSQTIIKIRSDRGTEFVNGIITQYCIENGIAHELSTARTPQQNGVAERR 2 K VQNEK+ I IRSD G EF N + ++C E+GI H ST RTPQQNGV ER+ Sbjct: 237 KLVQNEKNTNITSIRSDHGGEFQNILFQKFCEEHGINHNYSTPRTPQQNGVVERK 291 >emb|CAN76317.1| hypothetical protein VITISV_012360 [Vitis vinifera] Length = 1409 Score = 229 bits (584), Expect = 2e-64 Identities = 126/278 (45%), Positives = 164/278 (58%), Gaps = 3/278 (1%) Frame = -3 Query: 826 KGAKVIFGGNEAPGEIRGTGSIKKNGLE--ITDVAYVEGLNFNLLSISQLCDKGYNVGFN 653 KG V FG N + G I G G+I NG I V V+GL +N+LSISQLCDKG+ V F Sbjct: 488 KGGYVTFGEN-SKGMIIGQGNIG-NGTSSLIESVLLVDGLKYNILSISQLCDKGFKVIFE 545 Query: 652 MGVCQIKDAESNEIVLQGSRQKNMYVVDWSTATP-STCLLAKSTAESSWLWHKKLSHLNF 476 C IKD ++++ + G R N+Y ++ S C +K + SWLWH++L H N Sbjct: 546 ASHCIIKDIQNDKTIFMGHRCDNVYAINISKYDGHDRCFSSKH--DQSWLWHRRLGHANM 603 Query: 475 KTINKLARSHLVEGLPDSVYKKESICDACQMGKQIXXXXXXXXXXXSTRILHLLHMDLFG 296 I++L + LV GLP ++K+ +C+ACQMGKQI +TR L LLHMDLFG Sbjct: 604 DLISQLNKDELVRGLPKINFQKDKVCEACQMGKQIKNSFKNKNFILTTRPLELLHMDLFG 663 Query: 295 PVEPASISGKKYTLVVVDDYSRYTWTIFMCKKKETLQKLPQLMKRVQNEKSQTIIKIRSD 116 S+ GK Y V+VDD+SRYTW +F+ +K E + + +VQNEK TI IRSD Sbjct: 664 LSRTPSLGGKSYAFVIVDDFSRYTWVLFLSQKNEAFYEFSKFCNKVQNEKGFTITCIRSD 723 Query: 115 RGTEFVNGIITQYCIENGIAHELSTARTPQQNGVAERR 2 G EF N YC E+GI H S RTPQQNGV ER+ Sbjct: 724 HGREFENIDFEGYCNEHGINHNFSAPRTPQQNGVVERK 761 >gb|KYP46031.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan] Length = 772 Score = 225 bits (573), Expect = 2e-64 Identities = 127/295 (43%), Positives = 172/295 (58%), Gaps = 5/295 (1%) Frame = -3 Query: 871 TYDRKQEKSVKIQGSKGAKVIFGGNEAPGEIRGTGSIKKNGLE--ITDVAYVEGLNFNLL 698 T D + S+K++ V +G N G+I G G++ + I +V V+GL NLL Sbjct: 2 TGDPSKFSSLKLKNE--GYVTYGDNNK-GKILGHGNVGNPSSQTLIENVLLVDGLKHNLL 58 Query: 697 SISQLCDKGYNVGFNMGVCQIKDAESNEIVLQGSRQKNMYVVDW--STATPST-CLLAKS 527 SISQL DKG+ + F+ C I D +S EI G R N+Y++D S A +T CL+ + Sbjct: 59 SISQLSDKGFKIEFDNTCCLICDKKSKEIRFIGKRIDNIYMLDLEHSIAISNTKCLITQE 118 Query: 526 TAESSWLWHKKLSHLNFKTINKLARSHLVEGLPDSVYKKESICDACQMGKQIXXXXXXXX 347 E+ WLWH++ +H++ +NKL+R LV GLP + KE +CDACQ GKQ+ Sbjct: 119 --ENIWLWHRRAAHIHMDHLNKLSRKELVIGLPKLKFGKEKLCDACQKGKQVKASFKSKN 176 Query: 346 XXXSTRILHLLHMDLFGPVEPASISGKKYTLVVVDDYSRYTWTIFMCKKKETLQKLPQLM 167 +TR L L+HMDLFGP S+ G Y LV+VDDYSRYTW +F+ K + + Sbjct: 177 QISTTRPLQLIHMDLFGPSRTMSLGGNYYGLVIVDDYSRYTWVMFLANKNDAFNAFRKFA 236 Query: 166 KRVQNEKSQTIIKIRSDRGTEFVNGIITQYCIENGIAHELSTARTPQQNGVAERR 2 K VQNEK I IRSD G EF N + ++C E+GI H S RTPQQNGV ER+ Sbjct: 237 KLVQNEKCSNITSIRSDHGGEFQNMMFQKFCEEHGINHNFSAPRTPQQNGVVERK 291