BLASTX nr result
ID: Rehmannia28_contig00011144
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia28_contig00011144
(709 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_015388800.1| PREDICTED: uncharacterized protein LOC107178... 204 3e-57
gb|KYP59043.1| Retrovirus-related Pol polyprotein from transposo... 188 3e-54
gb|KYP40443.1| Retrovirus-related Pol polyprotein from transposo... 186 7e-53
ref|XP_015386863.1| PREDICTED: uncharacterized protein LOC107177... 191 2e-52
gb|KYP64199.1| Retrovirus-related Pol polyprotein from transposo... 189 2e-51
gb|KYP61341.1| Retrovirus-related Pol polyprotein from transposo... 188 2e-51
gb|KYP46257.1| Retrovirus-related Pol polyprotein from transposo... 188 2e-51
gb|KYP38387.1| Retrovirus-related Pol polyprotein from transposo... 183 8e-51
gb|KYP68420.1| Retrovirus-related Pol polyprotein from transposo... 183 1e-50
gb|KYP65286.1| Retrovirus-related Pol polyprotein from transposo... 184 3e-50
gb|KYP64898.1| Retrovirus-related Pol polyprotein from transposo... 184 6e-50
ref|XP_015889220.1| PREDICTED: uncharacterized protein LOC107424... 184 7e-50
gb|KYP51497.1| Retrovirus-related Pol polyprotein from transposo... 183 1e-49
ref|XP_015879622.1| PREDICTED: uncharacterized protein LOC107415... 182 2e-49
gb|KYP68392.1| Retrovirus-related Pol polyprotein from transposo... 182 2e-49
gb|KYP48079.1| Retrovirus-related Pol polyprotein from transposo... 171 8e-49
gb|KYP75416.1| Retrovirus-related Pol polyprotein from transposo... 179 1e-48
gb|KYP47787.1| Retrovirus-related Pol polyprotein from transposo... 181 1e-48
gb|KYP50444.1| Retrovirus-related Pol polyprotein from transposo... 180 1e-48
gb|KYP75335.1| Retrovirus-related Pol polyprotein from transposo... 175 2e-48
>ref|XP_015388800.1| PREDICTED: uncharacterized protein LOC107178344 [Citrus sinensis]
Length = 877
Score = 204 bits (518), Expect = 3e-57
Identities = 91/147 (61%), Positives = 107/147 (72%)
Frame = +3
Query: 3 RSLVPFFTKLGVNFRHPCPYTHQQQGKAERKHLHIVELGLSLLAHATLPLKFWWHXXXXX 182
R V + ++ G+ FRHPCPY H Q K ERKH HIVE GL+LLA A LPLKFWW+
Sbjct: 591 RPFVSYLSEQGIQFRHPCPYIHHQNRKIERKHRHIVETGLTLLAQAHLPLKFWWNAFHTA 650
Query: 183 XXXINLLPTPSLQNKSPYQLLYHTPPDYTFLKVFGCSCFPYLRPYNDHKLQFRSAKCIFL 362
IN LPTP L NKSP++ L+H PDYT +KVFGCSC+PYLRPYN HKLQFRS +C+FL
Sbjct: 651 TYLINRLPTPILNNKSPFEKLFHKLPDYTMMKVFGCSCYPYLRPYNHHKLQFRSERCVFL 710
Query: 363 GYSSSHKGYLCWHPSNRLYIARTVLFN 443
GYSS HKGY C H S R+YI+ V F+
Sbjct: 711 GYSSLHKGYQCLHLSGRVYISNHVTFD 737
>gb|KYP59043.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 426
Score = 188 bits (478), Expect = 3e-54
Identities = 83/142 (58%), Positives = 102/142 (71%)
Frame = +3
Query: 18 FFTKLGVNFRHPCPYTHQQQGKAERKHLHIVELGLSLLAHATLPLKFWWHXXXXXXXXIN 197
+ T+ G+ R CP+TH+Q G+ ERKH HI E L+LLA+A+LPL FW IN
Sbjct: 100 YLTENGIQHRLSCPHTHEQNGRPERKHRHITETSLTLLANASLPLHFWGEAFLTATTLIN 159
Query: 198 LLPTPSLQNKSPYQLLYHTPPDYTFLKVFGCSCFPYLRPYNDHKLQFRSAKCIFLGYSSS 377
LLPTPSLQN SPYQ+L+H PPDY FLK FGC C+P LRPYN HKL F+S +C+FLGYS+
Sbjct: 160 LLPTPSLQNISPYQILFHKPPDYNFLKTFGCGCYPLLRPYNQHKLDFKSHQCLFLGYSNQ 219
Query: 378 HKGYLCWHPSNRLYIARTVLFN 443
HKGY C P+ + YI+R V FN
Sbjct: 220 HKGYKCLSPTGKCYISRHVKFN 241
>gb|KYP40443.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 488
Score = 186 bits (472), Expect = 7e-53
Identities = 83/147 (56%), Positives = 106/147 (72%)
Frame = +3
Query: 3 RSLVPFFTKLGVNFRHPCPYTHQQQGKAERKHLHIVELGLSLLAHATLPLKFWWHXXXXX 182
R+L+PFF + G+ R CPYTH Q G ER+H HIVELGL++L H+ LPL FW H
Sbjct: 132 RTLIPFFQQEGILHRLTCPYTHHQNGTVERRHRHIVELGLAMLHHSALPLNFWDHAFLTA 191
Query: 183 XXXINLLPTPSLQNKSPYQLLYHTPPDYTFLKVFGCSCFPYLRPYNDHKLQFRSAKCIFL 362
IN LP+ S+ +SPY+L+++ PDY FLK+FGCSCFP LRPYN HK+Q RS +C+FL
Sbjct: 192 TYLINRLPSSSVGFQSPYKLIHNKDPDYAFLKIFGCSCFPLLRPYNQHKIQPRSEECVFL 251
Query: 363 GYSSSHKGYLCWHPSNRLYIARTVLFN 443
GYS SHKGY C S R+YI++ V+FN
Sbjct: 252 GYSPSHKGYKCLSRSGRIYISKDVIFN 278
>ref|XP_015386863.1| PREDICTED: uncharacterized protein LOC107177515 [Citrus sinensis]
Length = 1143
Score = 191 bits (486), Expect = 2e-52
Identities = 88/147 (59%), Positives = 100/147 (68%)
Frame = +3
Query: 3 RSLVPFFTKLGVNFRHPCPYTHQQQGKAERKHLHIVELGLSLLAHATLPLKFWWHXXXXX 182
RS V + G+ FRH CPYTH Q G ERKH HI ELGL+LLA A +PLKFWW
Sbjct: 671 RSFVNYLLAEGIQFRHLCPYTHNQNGLVERKHRHITELGLTLLAQAAMPLKFWWDSFHTA 730
Query: 183 XXXINLLPTPSLQNKSPYQLLYHTPPDYTFLKVFGCSCFPYLRPYNDHKLQFRSAKCIFL 362
IN LPTP L KSPY+ L+ PDY FL+VFGCSCF +LR YN HK QF ++KC+FL
Sbjct: 731 TYIINRLPTPVLSIKSPYESLFQLSPDYKFLRVFGCSCFLFLREYNKHKFQFHTSKCVFL 790
Query: 363 GYSSSHKGYLCWHPSNRLYIARTVLFN 443
GYS HKGY C HPS R YIA VLF+
Sbjct: 791 GYSPLHKGYKCLHPSGRTYIASHVLFD 817
>gb|KYP64199.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1408
Score = 189 bits (479), Expect = 2e-51
Identities = 86/147 (58%), Positives = 106/147 (72%)
Frame = +3
Query: 3 RSLVPFFTKLGVNFRHPCPYTHQQQGKAERKHLHIVELGLSLLAHATLPLKFWWHXXXXX 182
R+L+ FF + G+ R CPYTH Q G ER+H HIVELGL++L H+TLPL FW H
Sbjct: 634 RALISFFQQEGILHRLTCPYTHHQNGTVERRHRHIVELGLAMLHHSTLPLNFWDHAFLTA 693
Query: 183 XXXINLLPTPSLQNKSPYQLLYHTPPDYTFLKVFGCSCFPYLRPYNDHKLQFRSAKCIFL 362
IN LP+ S+ +SPY+L++H PDYTFLKVFGCSCFP LRPYN HKLQ RS +C+FL
Sbjct: 694 TYLINRLPSSSVGFQSPYKLIHHKDPDYTFLKVFGCSCFPLLRPYNQHKLQPRSEECVFL 753
Query: 363 GYSSSHKGYLCWHPSNRLYIARTVLFN 443
GYS HKGY C S R+YI++ V+FN
Sbjct: 754 GYSPLHKGYKCLSKSGRIYISKDVIFN 780
>gb|KYP61341.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1073
Score = 188 bits (478), Expect = 2e-51
Identities = 84/147 (57%), Positives = 105/147 (71%)
Frame = +3
Query: 3 RSLVPFFTKLGVNFRHPCPYTHQQQGKAERKHLHIVELGLSLLAHATLPLKFWWHXXXXX 182
RS + ++G+ R CP+TH Q G AERKH HIVELGL+L+A A LP++FW H
Sbjct: 297 RSFTTYLNEVGIQHRLICPHTHHQNGVAERKHRHIVELGLTLMAQAELPMQFWDHSFLTA 356
Query: 183 XXXINLLPTPSLQNKSPYQLLYHTPPDYTFLKVFGCSCFPYLRPYNDHKLQFRSAKCIFL 362
IN LP+ S+QN PY L+H PPDY L++FGCSCFP+LRPYN HKLQFRS +C+FL
Sbjct: 357 VYLINRLPSSSIQNAVPYHKLFHQPPDYLSLRIFGCSCFPHLRPYNKHKLQFRSQECVFL 416
Query: 363 GYSSSHKGYLCWHPSNRLYIARTVLFN 443
GYS+SHKGY C RLYI++ V+FN
Sbjct: 417 GYSTSHKGYKCLAADGRLYISKDVVFN 443
>gb|KYP46257.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1408
Score = 188 bits (478), Expect = 2e-51
Identities = 84/147 (57%), Positives = 105/147 (71%)
Frame = +3
Query: 3 RSLVPFFTKLGVNFRHPCPYTHQQQGKAERKHLHIVELGLSLLAHATLPLKFWWHXXXXX 182
RS + ++G+ R CP+TH Q G AERKH HIVELGL+L+A A LP++FW H
Sbjct: 632 RSFTTYLNEVGIQHRLICPHTHHQNGVAERKHRHIVELGLTLMAQAELPMQFWDHSFLTA 691
Query: 183 XXXINLLPTPSLQNKSPYQLLYHTPPDYTFLKVFGCSCFPYLRPYNDHKLQFRSAKCIFL 362
IN LP+ S+QN PY L+H PPDY L++FGCSCFP+LRPYN HKLQFRS +C+FL
Sbjct: 692 VYLINRLPSSSIQNAVPYHKLFHQPPDYLSLRIFGCSCFPHLRPYNKHKLQFRSQECVFL 751
Query: 363 GYSSSHKGYLCWHPSNRLYIARTVLFN 443
GYS+SHKGY C RLYI++ V+FN
Sbjct: 752 GYSTSHKGYKCLAADGRLYISKDVVFN 778
>gb|KYP38387.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 600
Score = 183 bits (464), Expect = 8e-51
Identities = 81/147 (55%), Positives = 105/147 (71%)
Frame = +3
Query: 3 RSLVPFFTKLGVNFRHPCPYTHQQQGKAERKHLHIVELGLSLLAHATLPLKFWWHXXXXX 182
R L F + G+ R CP+TH Q G ER+H+H+VELGL++L HA+LPLKFW H
Sbjct: 263 RPLTSFLQQHGIIHRLTCPHTHHQNGIVERRHIHVVELGLAMLHHASLPLKFWDHGFLTA 322
Query: 183 XXXINLLPTPSLQNKSPYQLLYHTPPDYTFLKVFGCSCFPYLRPYNDHKLQFRSAKCIFL 362
IN LP+ S+ ++SPY L++H PDY FLK+FGCSCFP LRPYN HK+Q RS +C+FL
Sbjct: 323 TYLINRLPSSSIGHQSPYHLIHHKEPDYQFLKIFGCSCFPLLRPYNQHKIQPRSEECLFL 382
Query: 363 GYSSSHKGYLCWHPSNRLYIARTVLFN 443
GYS +HKGY C S R+YI++ V+FN
Sbjct: 383 GYSPTHKGYKCLSKSGRIYISKDVVFN 409
>gb|KYP68420.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 653
Score = 183 bits (465), Expect = 1e-50
Identities = 81/147 (55%), Positives = 103/147 (70%)
Frame = +3
Query: 3 RSLVPFFTKLGVNFRHPCPYTHQQQGKAERKHLHIVELGLSLLAHATLPLKFWWHXXXXX 182
RS + ++G+ R CP+TH + G ERKH HI+ELGL+LLA A LP++FW H
Sbjct: 502 RSFTNYLNEVGIQHRLICPHTHHRNGVVERKHRHIIELGLTLLAQAELPMQFWDHAFLTG 561
Query: 183 XXXINLLPTPSLQNKSPYQLLYHTPPDYTFLKVFGCSCFPYLRPYNDHKLQFRSAKCIFL 362
IN LP+ S+QN PY L+H PPDY L++FGCSCFP+LRPYN HKLQFRS +C+F+
Sbjct: 562 VYLINRLPSSSIQNAIPYHKLFHQPPDYLSLRIFGCSCFPHLRPYNKHKLQFRSQECVFV 621
Query: 363 GYSSSHKGYLCWHPSNRLYIARTVLFN 443
GYS+SHKGY C RLYI+ V+FN
Sbjct: 622 GYSTSHKGYKCLAADERLYISNDVVFN 648
>gb|KYP65286.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
[Cajanus cajan]
Length = 904
Score = 184 bits (468), Expect = 3e-50
Identities = 83/147 (56%), Positives = 105/147 (71%)
Frame = +3
Query: 3 RSLVPFFTKLGVNFRHPCPYTHQQQGKAERKHLHIVELGLSLLAHATLPLKFWWHXXXXX 182
R+L+PFF + G+ R CPYTH Q G ER+H HIVE GL++L H+ LPL FW H
Sbjct: 601 RTLIPFFQQEGILHRLTCPYTHYQNGTVERRHRHIVEFGLAMLHHSALPLNFWDHAFLTA 660
Query: 183 XXXINLLPTPSLQNKSPYQLLYHTPPDYTFLKVFGCSCFPYLRPYNDHKLQFRSAKCIFL 362
IN LP+ S+ +SPY+L+++ PDY FLKVFGCSCFP LRPYN HK+Q RS +C+FL
Sbjct: 661 TCLINRLPSSSVGFQSPYKLIHNKDPDYAFLKVFGCSCFPLLRPYNQHKIQPRSEECVFL 720
Query: 363 GYSSSHKGYLCWHPSNRLYIARTVLFN 443
GYS SHKGY C S R+YI++ V+FN
Sbjct: 721 GYSPSHKGYKCLSRSGRIYISKDVIFN 747
>gb|KYP64898.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1007
Score = 184 bits (467), Expect = 6e-50
Identities = 80/142 (56%), Positives = 100/142 (70%)
Frame = +3
Query: 15 PFFTKLGVNFRHPCPYTHQQQGKAERKHLHIVELGLSLLAHATLPLKFWWHXXXXXXXXI 194
P+ + G+ R CP+THQQ G ERKH HI E GL+LLA A+LPL FW I
Sbjct: 231 PYLKQNGIIHRLSCPHTHQQNGSPERKHRHITETGLTLLAQASLPLSFWGEAFLTATSLI 290
Query: 195 NLLPTPSLQNKSPYQLLYHTPPDYTFLKVFGCSCFPYLRPYNDHKLQFRSAKCIFLGYSS 374
N+LPTP+L N SPY++L+H PDY FLK+FGC+C+P LRPYN HK F+S +C+FLGYS
Sbjct: 291 NMLPTPNLDNASPYEMLFHKAPDYKFLKIFGCACYPLLRPYNPHKFDFKSQQCLFLGYSP 350
Query: 375 SHKGYLCWHPSNRLYIARTVLF 440
SHKGY+C PS + YI+R V F
Sbjct: 351 SHKGYICLSPSGKRYISRNVKF 372
>ref|XP_015889220.1| PREDICTED: uncharacterized protein LOC107424043 [Ziziphus jujuba]
Length = 1270
Score = 184 bits (467), Expect = 7e-50
Identities = 80/147 (54%), Positives = 102/147 (69%)
Frame = +3
Query: 3 RSLVPFFTKLGVNFRHPCPYTHQQQGKAERKHLHIVELGLSLLAHATLPLKFWWHXXXXX 182
R +P+ ++G+ FRH CPY HQQ G+AERKH HIVE+GLS LA A +PL +WW
Sbjct: 766 RCFLPYLQQVGIKFRHSCPYMHQQNGRAERKHRHIVEVGLSFLAQAHMPLLYWWEAFTSA 825
Query: 183 XXXINLLPTPSLQNKSPYQLLYHTPPDYTFLKVFGCSCFPYLRPYNDHKLQFRSAKCIFL 362
IN LPT L SP++LL+ PDY FLKVFG +CFP+LRP+ +HK QF + KC+F+
Sbjct: 826 VYVINRLPTAILDFHSPFELLFKKVPDYDFLKVFGSACFPFLRPFQNHKFQFHTEKCVFI 885
Query: 363 GYSSSHKGYLCWHPSNRLYIARTVLFN 443
GYS HKGY C S ++YIAR+V FN
Sbjct: 886 GYSDDHKGYKCMSSSGKIYIARSVNFN 912
>gb|KYP51497.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 872
Score = 183 bits (464), Expect = 1e-49
Identities = 82/147 (55%), Positives = 105/147 (71%)
Frame = +3
Query: 3 RSLVPFFTKLGVNFRHPCPYTHQQQGKAERKHLHIVELGLSLLAHATLPLKFWWHXXXXX 182
R+L+PF + G+ R CPY H Q G ER+H HI+ELGL++L H+ LPLKFW H
Sbjct: 263 RTLIPFLQQEGILHRLTCPYMHHQNGTVERRHRHIIELGLAMLHHSALPLKFWDHAFLTA 322
Query: 183 XXXINLLPTPSLQNKSPYQLLYHTPPDYTFLKVFGCSCFPYLRPYNDHKLQFRSAKCIFL 362
IN LP+ S+ +SPY+L+++ PDY FLKVFGCSCFP LRPYN HK+Q RS +C+FL
Sbjct: 323 TYLINRLPSSSVGFQSPYKLIHNKDPDYAFLKVFGCSCFPLLRPYNQHKIQPRSEECLFL 382
Query: 363 GYSSSHKGYLCWHPSNRLYIARTVLFN 443
GYS SHKGY C S R+YI++ V+FN
Sbjct: 383 GYSPSHKGYKCLSRSGRIYISKDVIFN 409
>ref|XP_015879622.1| PREDICTED: uncharacterized protein LOC107415746 [Ziziphus jujuba]
Length = 884
Score = 182 bits (462), Expect = 2e-49
Identities = 81/137 (59%), Positives = 100/137 (72%)
Frame = +3
Query: 33 GVNFRHPCPYTHQQQGKAERKHLHIVELGLSLLAHATLPLKFWWHXXXXXXXXINLLPTP 212
G+ FRHP P+TH Q GKAERKH HI E+GLSLLA A + LK+WW IN PT
Sbjct: 373 GILFRHPYPHTHAQNGKAERKHRHITEVGLSLLAQAHMTLKYWWEAFSSAVYLINRTPTT 432
Query: 213 SLQNKSPYQLLYHTPPDYTFLKVFGCSCFPYLRPYNDHKLQFRSAKCIFLGYSSSHKGYL 392
L KSP+Q +Y+ PDY FL VFGC+C+PYLRPY+ KLQFR++KC+F+GYS+ HKGY
Sbjct: 433 VLDYKSPFQKVYNQVPDYGFLTVFGCACYPYLRPYHTQKLQFRTSKCVFVGYSTEHKGYK 492
Query: 393 CWHPSNRLYIARTVLFN 443
HPS RLY+A++V FN
Sbjct: 493 YMHPSGRLYVAKSVKFN 509
>gb|KYP68392.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 1085
Score = 182 bits (463), Expect = 2e-49
Identities = 83/147 (56%), Positives = 102/147 (69%)
Frame = +3
Query: 3 RSLVPFFTKLGVNFRHPCPYTHQQQGKAERKHLHIVELGLSLLAHATLPLKFWWHXXXXX 182
RS + ++G+ R C +TH Q G ERKH HIVELGL+LLA A LP++FW H
Sbjct: 504 RSFTNYLNEVGIQHRLICRHTHHQNGVVERKHRHIVELGLTLLAQAELPMQFWDHAFLTG 563
Query: 183 XXXINLLPTPSLQNKSPYQLLYHTPPDYTFLKVFGCSCFPYLRPYNDHKLQFRSAKCIFL 362
IN LP+ S+QN PY L+H PPDY L++FGCSCFP+LRPYN HKLQFRS +C+FL
Sbjct: 564 VYLINRLPSSSIQNVVPYHKLFHQPPDYLSLRIFGCSCFPHLRPYNKHKLQFRSQECVFL 623
Query: 363 GYSSSHKGYLCWHPSNRLYIARTVLFN 443
GYS+SHKGY C RLYI+ V+FN
Sbjct: 624 GYSTSHKGYKCLAADERLYISNDVVFN 650
>gb|KYP48079.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 302
Score = 171 bits (432), Expect = 8e-49
Identities = 82/145 (56%), Positives = 100/145 (68%)
Frame = +3
Query: 9 LVPFFTKLGVNFRHPCPYTHQQQGKAERKHLHIVELGLSLLAHATLPLKFWWHXXXXXXX 188
L + LGVN R CP+T Q G ERKH HIVELGL+L +HA+LPLKFW
Sbjct: 146 LPKYLKDLGVNHRVICPHTPHQNGVIERKHRHIVELGLTL-SHASLPLKFWDSTFCTAVY 204
Query: 189 XINLLPTPSLQNKSPYQLLYHTPPDYTFLKVFGCSCFPYLRPYNDHKLQFRSAKCIFLGY 368
IN LPT SL+ PY +L+ PDYTFLK FGC+CFP LRPYN HKL FRS +C+FLGY
Sbjct: 205 LINRLPTASLKYVVPYTILFKQSPDYTFLKTFGCACFPLLRPYNKHKLDFRSHECVFLGY 264
Query: 369 SSSHKGYLCWHPSNRLYIARTVLFN 443
S+SHKGY C P +++I++ V+FN
Sbjct: 265 STSHKGYKCLSPIGKIFISKDVVFN 289
>gb|KYP75416.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 785
Score = 179 bits (455), Expect = 1e-48
Identities = 79/146 (54%), Positives = 105/146 (71%)
Frame = +3
Query: 3 RSLVPFFTKLGVNFRHPCPYTHQQQGKAERKHLHIVELGLSLLAHATLPLKFWWHXXXXX 182
RS + + G+ R CP+TH Q G ERKH HIVELGL++LA A LP++FW H
Sbjct: 536 RSFTSYLAQNGIQHRLICPHTHHQNGVVERKHRHIVELGLTMLAQAHLPMQFWDHAFLTS 595
Query: 183 XXXINLLPTPSLQNKSPYQLLYHTPPDYTFLKVFGCSCFPYLRPYNDHKLQFRSAKCIFL 362
IN LP+ S+QN P++ L+H PDY FL++FGCSCFP+LRPYN +KLQFRS +C+FL
Sbjct: 596 VYLINRLPSSSIQNDVPFRKLFHQLPDYNFLRIFGCSCFPHLRPYNKNKLQFRSQECVFL 655
Query: 363 GYSSSHKGYLCWHPSNRLYIARTVLF 440
GYS+SHKGY C P+ R++I++ V+F
Sbjct: 656 GYSTSHKGYKCLAPTGRIFISKDVVF 681
>gb|KYP47787.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1299
Score = 181 bits (458), Expect = 1e-48
Identities = 82/145 (56%), Positives = 102/145 (70%)
Frame = +3
Query: 9 LVPFFTKLGVNFRHPCPYTHQQQGKAERKHLHIVELGLSLLAHATLPLKFWWHXXXXXXX 188
L+PF K G+ R CPYTH Q G ER H HI ELGL++L HA+LPLKFW H
Sbjct: 684 LIPFLQKEGIVHRLTCPYTHHQNGMVERLHRHIFELGLAMLHHASLPLKFWDHAFLTAGY 743
Query: 189 XINLLPTPSLQNKSPYQLLYHTPPDYTFLKVFGCSCFPYLRPYNDHKLQFRSAKCIFLGY 368
IN LP+ S+ + SPYQL++H DY FLK+FGCSCFP LRPYN +K+Q RS +C+FLGY
Sbjct: 744 LINRLPSSSIDHHSPYQLIHHKELDYQFLKIFGCSCFPLLRPYNQYKIQPRSEECLFLGY 803
Query: 369 SSSHKGYLCWHPSNRLYIARTVLFN 443
S +HKGY C S R+YI++ V+FN
Sbjct: 804 SLTHKGYKCLSKSGRIYISKDVVFN 828
>gb|KYP50444.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1165
Score = 180 bits (457), Expect = 1e-48
Identities = 79/147 (53%), Positives = 101/147 (68%)
Frame = +3
Query: 3 RSLVPFFTKLGVNFRHPCPYTHQQQGKAERKHLHIVELGLSLLAHATLPLKFWWHXXXXX 182
+SL K G+ R CPYT Q G+AERKH H+VE GL+LLA A +PL +WW
Sbjct: 498 KSLSKVLIKTGIQLRESCPYTSAQNGRAERKHRHVVESGLTLLAQAKMPLHYWWEAFSTA 557
Query: 183 XXXINLLPTPSLQNKSPYQLLYHTPPDYTFLKVFGCSCFPYLRPYNDHKLQFRSAKCIFL 362
IN LPT ++NKSPYQ L+ PDYT +K FGC+C+P L+PYN HKLQF + KC+FL
Sbjct: 558 VFLINRLPTQVIKNKSPYQQLFDKNPDYTAMKTFGCACYPCLKPYNQHKLQFHTTKCVFL 617
Query: 363 GYSSSHKGYLCWHPSNRLYIARTVLFN 443
GYS SHKGY C + + R++I+R V+FN
Sbjct: 618 GYSGSHKGYKCLNSTGRIFISRHVVFN 644
>gb|KYP75335.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 537
Score = 175 bits (444), Expect = 2e-48
Identities = 77/146 (52%), Positives = 104/146 (71%)
Frame = +3
Query: 3 RSLVPFFTKLGVNFRHPCPYTHQQQGKAERKHLHIVELGLSLLAHATLPLKFWWHXXXXX 182
RS + + G+ R CP+TH Q G ERKH HIVELGL++LA A LP++FW H
Sbjct: 172 RSFTSYLAQNGIQHRLICPHTHHQNGIVERKHRHIVELGLTMLAQAHLPMQFWDHAFLTS 231
Query: 183 XXXINLLPTPSLQNKSPYQLLYHTPPDYTFLKVFGCSCFPYLRPYNDHKLQFRSAKCIFL 362
IN LP+ S+Q+ P++ L+H PDY FL++FGCSCFP+LRPYN +KLQ RS +C+FL
Sbjct: 232 VYLINRLPSSSIQHDVPFRKLFHQLPDYNFLRIFGCSCFPHLRPYNKNKLQLRSQECVFL 291
Query: 363 GYSSSHKGYLCWHPSNRLYIARTVLF 440
GYS+SHKGY C P+ R++I++ V+F
Sbjct: 292 GYSTSHKGYKCLAPTGRIFISKDVIF 317