BLASTX nr result

ID: Rehmannia28_contig00011119 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00011119
         (356 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_012830908.1| PREDICTED: pentatricopeptide repeat-containi...    68   6e-11
gb|EYU42850.1| hypothetical protein MIMGU_mgv1a0029291mg, partia...    57   4e-07
gb|KYP69223.1| Pentatricopeptide repeat-containing protein At3g5...    53   7e-06
gb|KHN37371.1| Pentatricopeptide repeat-containing protein [Glyc...    53   1e-05

>ref|XP_012830908.1| PREDICTED: pentatricopeptide repeat-containing protein At3g59040
           [Erythranthe guttata]
          Length = 630

 Score = 67.8 bits (164), Expect = 6e-11
 Identities = 33/43 (76%), Positives = 39/43 (90%)
 Frame = -1

Query: 356 SGVPPDQKSKNILLSLAKTVEEQIEAKQLVENQSINRLLNNVE 228
           SGV PDQK+KNILLSLAKT EEQ EAKQ+VE+ S++R+LNNVE
Sbjct: 485 SGVSPDQKAKNILLSLAKTAEEQTEAKQIVESLSLDRILNNVE 527


>gb|EYU42850.1| hypothetical protein MIMGU_mgv1a0029291mg, partial [Erythranthe
           guttata]
          Length = 424

 Score = 56.6 bits (135), Expect = 4e-07
 Identities = 27/35 (77%), Positives = 30/35 (85%)
 Frame = -1

Query: 356 SGVPPDQKSKNILLSLAKTVEEQIEAKQLVENQSI 252
           SGV PDQK+KNILLSLAKT EEQ EAKQ+VEN  +
Sbjct: 291 SGVSPDQKAKNILLSLAKTAEEQTEAKQIVENDDV 325


>gb|KYP69223.1| Pentatricopeptide repeat-containing protein At3g59040 family
           [Cajanus cajan]
          Length = 556

 Score = 53.1 bits (126), Expect = 7e-06
 Identities = 27/44 (61%), Positives = 34/44 (77%)
 Frame = -1

Query: 356 SGVPPDQKSKNILLSLAKTVEEQIEAKQLVENQSINRLLNNVEG 225
           SGVPPDQK+KN+LLSLA T EE+ EA +LV + S N  L+N+ G
Sbjct: 481 SGVPPDQKAKNVLLSLATTDEERKEANELVVHFSENNSLHNLNG 524


>gb|KHN37371.1| Pentatricopeptide repeat-containing protein [Glycine soja]
          Length = 523

 Score = 52.8 bits (125), Expect = 1e-05
 Identities = 26/44 (59%), Positives = 34/44 (77%)
 Frame = -1

Query: 356 SGVPPDQKSKNILLSLAKTVEEQIEAKQLVENQSINRLLNNVEG 225
           +G+PPDQK+KN+LLSLAKT EE+ EA +LV + S N  L+ V G
Sbjct: 449 NGIPPDQKAKNVLLSLAKTDEEREEANELVGHFSENNSLSKVNG 492


Top