BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00011050
         (2084 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CDP14470.1| unnamed protein product [Coffea canephora]            262   9e-95
emb|CDP09717.1| unnamed protein product [Coffea canephora]            237   7e-89
ref|XP_013709827.1| PREDICTED: uncharacterized protein LOC106413...   215   2e-85
ref|XP_008367994.1| PREDICTED: uncharacterized protein LOC103431...   220   5e-83
ref|XP_008366311.1| PREDICTED: putative ribonuclease H protein A...   218   6e-83
ref|XP_009145555.1| PREDICTED: putative ribonuclease H protein A...   221   2e-82
ref|XP_009140270.1| PREDICTED: putative ribonuclease H protein A...   229   7e-82
ref|XP_008372934.1| PREDICTED: putative ribonuclease H protein A...   213   9e-82
ref|XP_013658143.1| PREDICTED: uncharacterized protein LOC106362...   207   3e-81
ref|XP_008355389.1| PREDICTED: putative ribonuclease H protein A...   209   9e-81
ref|XP_008367240.1| PREDICTED: putative ribonuclease H protein A...   209   9e-81
ref|XP_008387184.1| PREDICTED: putative ribonuclease H protein A...   217   1e-80
ref|XP_009113843.1| PREDICTED: putative ribonuclease H protein A...   228   2e-80
ref|XP_008356436.1| PREDICTED: putative ribonuclease H protein A...   208   2e-80
ref|XP_008391838.1| PREDICTED: uncharacterized protein LOC103454...   211   6e-80
ref|XP_008351830.1| PREDICTED: putative ribonuclease H protein A...   234   7e-80
gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japo...   214   1e-79
gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza ...   214   1e-79
gb|AAP53315.2| retrotransposon protein, putative, unclassified [...   214   1e-79
gb|ABA98491.1| retrotransposon protein, putative, unclassified [...   214   2e-79

>emb|CDP14470.1| unnamed protein product [Coffea canephora]
          Length = 660

 Score =  262 bits (670), Expect(3) = 9e-95
 Identities = 120/306 (39%), Positives = 196/306 (64%)
 Frame = +1

Query: 232  FFSRNTPNSVQDNICGMFRGIAKHHSSKYLGLPLGIGKSKKEVFRYVVDAVQGRICSWKN 411
            FFS+N P   + ++C    G+ +    KYLGLP+ I ++K+++F ++ + ++ ++  W+N
Sbjct: 18   FFSKNMPMEQRQDVCSALGGMTEMTQGKYLGLPMVISRTKEQIFGFIKENIKRKMHDWRN 77

Query: 412  MFLSTAGREVLIKAVLESLPVYVMSVFKLPIGICKEICRCFANFWWGDNVEKKHKLHWKS 591
              LSTAG+EV++KAV  ++P Y MSVFKLP  +CK+I    AN+WWG+    K+KLHW S
Sbjct: 78   KLLSTAGKEVMLKAVSMAMPTYAMSVFKLPRKLCKDISALMANYWWGE-ANGKNKLHWLS 136

Query: 592  WTKLALDKEEGGLGFHDIQLFNEALMVKQLWRVLSQPALLVSKVIKARYFPKGNFFDVEP 771
            W K++L +  GGLGF DI+ +N+AL+ KQ+WR+L++P LL+SKV++ARYFPK +     P
Sbjct: 137  WRKMSLSRNAGGLGFKDIEAYNKALLGKQVWRILTKPNLLISKVLRARYFPKDSILTCRP 196

Query: 772  TQSASWMWNCWIKLKDILRMGLRYKVGNGKSIRIWDSPWLPEAMNFKPTRTNQR*GDPVW 951
             Q+ASW+W   +  + ++  G+  ++GNG+S  IW   W+P + + +PT    +  +   
Sbjct: 197  KQNASWIWQGLLGARRVVEKGVIRRIGNGRSTSIWGHRWIPGSSSGRPTSLGPQSYNLKM 256

Query: 952  VSELLEDGGSSWNSSLVFSLFDKADAEKILKIRGMQEGKKDVLWWHLENLGSYSVKSAYS 1131
            V+EL+      W  + +F  F+++DAEKIL I     G++D  +W     G Y+V S Y 
Sbjct: 257  VNELISH--HRWKRNTIFQHFNQSDAEKILNIPLSLMGREDNYYWQHNPGGIYTVSSGYK 314

Query: 1132 KLLKDK 1149
             ++K++
Sbjct: 315  CIMKER 320



 Score =  110 bits (274), Expect(3) = 9e-95
 Identities = 51/139 (36%), Positives = 73/139 (52%), Gaps = 1/139 (0%)
 Frame = +2

Query: 1220 WKLNVKGKIKHFIWKCFSDILPSNCNLRKKWMAVDTICQICGEADETTEHIFFECRRAKI 1399
            WKLN+K K+K FIWKC +  LP    + +K    D +C++CGE  ET EH+   C+ ++ 
Sbjct: 350  WKLNIKHKVKIFIWKCITGALPVRAAIFRKTRMGDPVCRLCGEDQETVEHLMLNCQHSQQ 409

Query: 1400 IWKLSPVSWEGVCDEVHSFPIWWGKVCGVGKDACS*NRLHLTTYILWWLWKTRNLWIFQ- 1576
            +WK +P+ W+G  D+   F  WW ++            + LT  ILW LWK RN   F+ 
Sbjct: 410  VWKAAPIQWDGAMDQKGDFRRWWIRISEARTRQGGMEHIGLTAIILWQLWKERNSKEFEN 469

Query: 1577 KVLKPEKLTVDCAWAEWNE 1633
            K       T+  A  EW E
Sbjct: 470  KTSCSPARTIGKAQKEWLE 488



 Score = 26.9 bits (58), Expect(3) = 9e-95
 Identities = 13/25 (52%), Positives = 19/25 (76%), Gaps = 1/25 (4%)
 Frame = +2

Query: 182 IYKLFSGQKVNLEKSSI-FSAGIPL 253
           +Y+  SGQ +NLEKSS+ FS  +P+
Sbjct: 1   MYEEASGQLINLEKSSVFFSKNMPM 25


>emb|CDP09717.1| unnamed protein product [Coffea canephora]
          Length = 613

 Score =  237 bits (605), Expect(2) = 7e-89
 Identities = 115/266 (43%), Positives = 175/266 (65%)
 Frame = +1

Query: 349  KKEVFRYVVDAVQGRICSWKNMFLSTAGREVLIKAVLESLPVYVMSVFKLPIGICKEICR 528
            +++VF Y+ D++  R+ SWKN  LS  G+EVL+K+V  ++PVY MS FKLP  +CKE+  
Sbjct: 15   QQQVFGYIKDSISRRMNSWKNKLLSQGGKEVLLKSVSMAMPVYTMSCFKLPNKLCKEVTS 74

Query: 529  CFANFWWGDNVEKKHKLHWKSWTKLALDKEEGGLGFHDIQLFNEALMVKQLWRVLSQPAL 708
             FAN+WWG++ E ++K+HW SW +LA DK+EGGLGF ++Q FN+AL+ KQ+WRV+S+P L
Sbjct: 75   IFANYWWGES-EGRNKMHWCSWGRLARDKKEGGLGFRELQNFNKALLAKQVWRVISKPNL 133

Query: 709  LVSKVIKARYFPKGNFFDVEPTQSASWMWNCWIKLKDILRMGLRYKVGNGKSIRIWDSPW 888
            LVSKV++A+YF K + F  +  + ASW+W   + ++D +R G R K+GNGK+  IW+  W
Sbjct: 134  LVSKVLRAKYFHKESIFKCKIPKCASWIWQSLMNVRDFVRKGTRRKIGNGKATNIWEDNW 193

Query: 889  LPEAMNFKPTRTNQR*GDPVWVSELLEDGGSSWNSSLVFSLFDKADAEKILKIRGMQEGK 1068
            +P   + K T    +  +   V EL+   G  W   LV  +F++ DA++IL I     G+
Sbjct: 194  IPGNKDGKVTTVMPQSCNIRRVEELI--SGFRWRIPLVSRIFNRKDAKEILDIPISIAGR 251

Query: 1069 KDVLWWHLENLGSYSVKSAYSKLLKD 1146
            +D  +W     G+Y+V S Y  L ++
Sbjct: 252  EDSNYWLHSGSGTYTVNSGYKALCQE 277



 Score =  120 bits (302), Expect(2) = 7e-89
 Identities = 55/142 (38%), Positives = 81/142 (57%)
 Frame = +2

Query: 1220 WKLNVKGKIKHFIWKCFSDILPSNCNLRKKWMAVDTICQICGEADETTEHIFFECRRAKI 1399
            WKL VK KIKHFIW+  + +LP N  + K+    D IC  CGE +E+ EH+FF+C RA+ 
Sbjct: 305  WKLKVKSKIKHFIWRSLNGLLPVNDLVFKRIHQGDPICDGCGEQEESIEHLFFQCSRAQE 364

Query: 1400 IWKLSPVSWEGVCDEVHSFPIWWGKVCGVGKDACS*NRLHLTTYILWWLWKTRNLWIFQK 1579
            +WK++P+ W+G+ ++  +  +WW  +            + LT  ILW +WK RN W F  
Sbjct: 365  VWKMAPIQWDGLTEQTRNILVWWNSMLEATNRIEGREHVELTVNILWQIWKRRNEWKFNA 424

Query: 1580 VLKPEKLTVDCAWAEWNEFQAS 1645
              +    ++  A  EW E QAS
Sbjct: 425  KRRHPWESIKKALQEWQE-QAS 445


>ref|XP_013709827.1| PREDICTED: uncharacterized protein LOC106413636 [Brassica napus]
          Length = 1521

 Score =  215 bits (548), Expect(3) = 2e-85
 Identities = 103/272 (37%), Positives = 163/272 (59%)
 Frame = +1

Query: 313  KYLGLPLGIGKSKKEVFRYVVDAVQGRICSWKNMFLSTAGREVLIKAVLESLPVYVMSVF 492
            KYLGL    G+ K E+F Y+++ V+     W   FLS  G+E+L+KA+  ++P+Y M+VF
Sbjct: 754  KYLGLQEKFGRKKSEMFHYIIEKVKKITQGWHQKFLSPGGKEILLKAIALAMPIYSMNVF 813

Query: 493  KLPIGICKEICRCFANFWWGDNVEKKHKLHWKSWTKLALDKEEGGLGFHDIQLFNEALMV 672
            KL   IC+EI    A FWW D+ EKK  +HW SW K+ L K EGGLGF D++ FN+AL+ 
Sbjct: 814  KLTKEICEEINGILARFWW-DSGEKKG-IHWFSWKKMGLPKREGGLGFRDLENFNQALLG 871

Query: 673  KQLWRVLSQPALLVSKVIKARYFPKGNFFDVEPTQSASWMWNCWIKLKDILRMGLRYKVG 852
            KQ+WR++  P  L++++++ARYFP G+  +    + AS+ W   +  +++++ G+R+ +G
Sbjct: 872  KQVWRIMQHPECLMARILRARYFPDGDILNARLQKRASYAWKSLLHGRNLVKQGMRFIIG 931

Query: 853  NGKSIRIWDSPWLPEAMNFKPTRTNQR*GDPVWVSELLEDGGSSWNSSLVFSLFDKADAE 1032
            NG+ I +W  PW+P+     P   NQ   +   V+E      + W+   +       D +
Sbjct: 932  NGELINMWTDPWIPDHPPRPPRPLNQT-EEICKVNEFFSADRNHWDERKLRERIHPEDVD 990

Query: 1033 KILKIRGMQEGKKDVLWWHLENLGSYSVKSAY 1128
            KIL I+   + ++D++ WH    G YSVKS Y
Sbjct: 991  KILAIKISSKAQQDLMGWHYNEDGIYSVKSGY 1022



 Score = 88.6 bits (218), Expect(3) = 2e-85
 Identities = 43/126 (34%), Positives = 69/126 (54%)
 Frame = +2

Query: 1202 VREKRSWKLNVKGKIKHFIWKCFSDILPSNCNLRKKWMAVDTICQICGEADETTEHIFFE 1381
            V ++R WKL    K++HF+W+  S  LP   NL+++ +  D +CQ C + +E+  H+FFE
Sbjct: 1042 VLKQRIWKLKSPPKLQHFLWRILSQCLPVGSNLKRRHVVPDDVCQRCFQQEESELHVFFE 1101

Query: 1382 CRRAKIIWKLSPVSWEGVCDEVHSFPIWWGKVCGVGKDACS*NRLHLTTYILWWLWKTRN 1561
            C  AK+IW+ S +    +     SF     +   +G      +      +ILW LWK+RN
Sbjct: 1102 CPYAKMIWRTSGLDNAVINSSTSSFEDKIQECINIGTSTRLIHFQDQPIWILWRLWKSRN 1161

Query: 1562 LWIFQK 1579
            + IFQ+
Sbjct: 1162 MLIFQQ 1167



 Score = 64.3 bits (155), Expect(3) = 2e-85
 Identities = 37/97 (38%), Positives = 52/97 (53%)
 Frame = +2

Query: 2   LIISEVFSSLIKAAVXXXXXXXXRICKKGPMITHLLFADDSLVFCEASEDQAKALLYIFH 181
           ++ +EV S ++  A+        +I  + P + HLLFADDSL F  A+E  AK +  IF 
Sbjct: 650 ILCAEVLSHMMNVAMSERSLGGIKISIQAPAVNHLLFADDSLFFSLANERAAKKMKKIFE 709

Query: 182 IYKLFSGQKVNLEKSSIFSAGIPLILCKTIFVGCLGV 292
           +Y+  SGQ VNL KSSI        + KT     LG+
Sbjct: 710 VYEAISGQAVNLNKSSITFGSRVSPITKTKMKHILGI 746


>ref|XP_008367994.1| PREDICTED: uncharacterized protein LOC103431605 [Malus domestica]
          Length = 1647

 Score =  220 bits (560), Expect(3) = 5e-83
 Identities = 117/304 (38%), Positives = 164/304 (53%)
 Frame = +1

Query: 232  FFSRNTPNSVQDNICGMFRGIAKHHSSKYLGLPLGIGKSKKEVFRYVVDAVQGRICSWKN 411
            FF  NT   ++ NI       +K    KYLGL    G SKK VF  + D ++  +  W  
Sbjct: 725  FFGANTSKKMRANIVDSLMIQSKXGFGKYLGLQADFGHSKKAVFXEIRDKIEAXMSGWAE 784

Query: 412  MFLSTAGREVLIKAVLESLPVYVMSVFKLPIGICKEICRCFANFWWGDNVEKKHKLHWKS 591
             FLS AG+E+L+K V  +LP Y MS FKLPIG+C+++ R   N+WW  N E++  +HW S
Sbjct: 785  QFLSQAGKEILVKTVAMALPNYAMSCFKLPIGVCRDVERAIRNYWWRGN-EQRKGIHWIS 843

Query: 592  WTKLALDKEEGGLGFHDIQLFNEALMVKQLWRVLSQPALLVSKVIKARYFPKGNFFDVEP 771
              +L   K+ GGLGF DIQ  N A + K  WR+   P  L++ V++ +YFP  +F +   
Sbjct: 844  XDRLMKQKKAGGLGFKDIQCVNLAFLAKIGWRITLNPMSLLASVLRDKYFPGKSFGEXPK 903

Query: 772  TQSASWMWNCWIKLKDILRMGLRYKVGNGKSIRIWDSPWLPEAMNFKPTRTNQR*GDPVW 951
             ++ S  W    + + +L +GLR++VGNGKSI I + PW P+   FK    N        
Sbjct: 904  GKNTSXGWKGLFEARKVLNLGLRWRVGNGKSINIREDPWFPKPATFKVRPRNNL--VETM 961

Query: 952  VSELLEDGGSSWNSSLVFSLFDKADAEKILKIRGMQEGKKDVLWWHLENLGSYSVKSAYS 1131
            VS+L++     W + L+ + F + D   IL I     G  D L WH    G YSVKS YS
Sbjct: 962  VSDLIDSDTKIWRTDLIANGFHRDDVSTILIIPLSHAGSNDRLVWHYATNGIYSVKSGYS 1021

Query: 1132 KLLK 1143
              LK
Sbjct: 1022 MALK 1025



 Score = 85.1 bits (209), Expect(3) = 5e-83
 Identities = 47/144 (32%), Positives = 74/144 (51%), Gaps = 2/144 (1%)
 Frame = +2

Query: 1220 WKLNVKGKIKHFIWKCFSDILPSNCNLRKKWMAVDTICQICGEADETTEHIFFECRRAKI 1399
            W+L V  KI+ FIW+C ++ L    NL+++ M VD +C +C   +ET  H+FF C  + +
Sbjct: 1054 WRLQVPHKIRIFIWRCCNNALAVRRNLKRRHMRVDNVCGVCXAVNETENHLFFRCEISHV 1113

Query: 1400 IWKLSPVSWEGVCDEVHSFPIWWGKVCGVGKDACS*NRL-HLTTYILWWLWKTRNLWIFQ 1576
             W  SP+       E   F   W   C   KD    + + H   + LW LWK RN  +F+
Sbjct: 1114 FWFCSPLHLNSHVLEGRDFLESWCNFCDQVKDRIDADDIXHDFAFGLWRLWKNRNDVVFK 1173

Query: 1577 KVLKPEKLTVDCAWAE-WNEFQAS 1645
             + + + L +  AW +   E++AS
Sbjct: 1174 GIYR-QPLDILEAWKKSTGEYKAS 1196



 Score = 55.1 bits (131), Expect(3) = 5e-83
 Identities = 28/78 (35%), Positives = 45/78 (57%)
 Frame = +2

Query: 2   LIISEVFSSLIKAAVXXXXXXXXRICKKGPMITHLLFADDSLVFCEASEDQAKALLYIFH 181
           L+ +E    LI+  +        +I   G  +THL FADDS+VF  AS ++A++++ +  
Sbjct: 648 LLCTEGLXMLIRRGLERGVLHGFKISXAGAPLTHLFFADDSVVFGNASVEEAESIVEVLK 707

Query: 182 IYKLFSGQKVNLEKSSIF 235
            Y   SGQ++NL K S+F
Sbjct: 708 TYARGSGQEINLTKXSVF 725


>ref|XP_008366311.1| PREDICTED: putative ribonuclease H protein At1g65750 [Malus
            domestica]
          Length = 812

 Score =  218 bits (556), Expect(3) = 6e-83
 Identities = 118/304 (38%), Positives = 172/304 (56%)
 Frame = +1

Query: 232  FFSRNTPNSVQDNICGMFRGIAKHHSSKYLGLPLGIGKSKKEVFRYVVDAVQGRICSWKN 411
            +F    P   +  I      + K    +YLGL    G SKK VF  V +A+ GRI  W  
Sbjct: 294  YFGNQCPRQQRRLIESCTNFVGKETFGRYLGLSADFGASKKAVFEGVREALDGRINGWAE 353

Query: 412  MFLSTAGREVLIKAVLESLPVYVMSVFKLPIGICKEICRCFANFWWGDNVEKKHKLHWKS 591
             FLS AG+EV+IKAV  +LP Y MS FKLP+ +CKE+    ANFWW  + EK + +HW S
Sbjct: 354  QFLSPAGKEVMIKAVAIALPNYAMSCFKLPVNLCKEMESNIANFWWRGSREK-NGMHWIS 412

Query: 592  WTKLALDKEEGGLGFHDIQLFNEALMVKQLWRVLSQPALLVSKVIKARYFPKGNFFDVEP 771
            W K+   K+ GGLGF D+  FN A + K  WR+L+ P  L+SK++K +YFP+ +F + + 
Sbjct: 413  WEKMKRRKKVGGLGFRDLLSFNLAYLAKIGWRILTNPLSLLSKILKXKYFPECSFMEAKV 472

Query: 772  TQSASWMWNCWIKLKDILRMGLRYKVGNGKSIRIWDSPWLPEAMNFKPTRTNQR*GDPVW 951
             + ++W W   ++ K IL  G R++VG+G SIR+   PWLP    F+    ++    PV 
Sbjct: 473  GKRSTWGWKGIMQGKKILERGRRWRVGDGSSIRVKYDPWLPRPHTFRV--ISKHLDMPVM 530

Query: 952  VSELLEDGGSSWNSSLVFSLFDKADAEKILKIRGMQEGKKDVLWWHLENLGSYSVKSAYS 1131
            V +L+     SW   LV   F++ ++  IL I    EG  D + WH  + G Y+VK+ Y 
Sbjct: 531  VKDLINPVTGSWMVDLVKGCFEEEESNIILGIPTSLEGCNDRIIWHHTSNGDYTVKTGYG 590

Query: 1132 KLLK 1143
             +++
Sbjct: 591  IVME 594



 Score = 85.1 bits (209), Expect(3) = 6e-83
 Identities = 44/143 (30%), Positives = 74/143 (51%), Gaps = 1/143 (0%)
 Frame = +2

Query: 1220 WKLNVKGKIKHFIWKCFSDILPSNCNLRKKWMAVDTICQICGEADETTEHIFFECRRAKI 1399
            W+L V  K+K+FIW+C +  L +  NL ++ M V+T C +CG+A ET  H+FFEC  +++
Sbjct: 623  WRLKVPNKMKYFIWRCCTSSLAARGNLHRRRMRVNTTCVLCGDAKETEHHLFFECEFSRV 682

Query: 1400 IWKLSPVSWEGVCDEVHSFPIWWGKVCG-VGKDACS*NRLHLTTYILWWLWKTRNLWIFQ 1576
             W   P+  +        F   W  +C    K+      L    +I+W +WK RN  +F+
Sbjct: 683  FWFSCPLQLDIKLATRKDFGDCWYSLCNRFRKEKNHELILQECVFIMWRIWKCRNDLLFK 742

Query: 1577 KVLKPEKLTVDCAWAEWNEFQAS 1645
                    +V+   ++  E++AS
Sbjct: 743  GTEANPMESVNVVRSQIMEYRAS 765



 Score = 56.2 bits (134), Expect(3) = 6e-83
 Identities = 26/78 (33%), Positives = 45/78 (57%)
 Frame = +2

Query: 2   LIISEVFSSLIKAAVXXXXXXXXRICKKGPMITHLLFADDSLVFCEASEDQAKALLYIFH 181
           LI +E  S++++           R+   G  I+HL FADD+++FC+A+E + + +L +  
Sbjct: 217 LICAEGLSAVLRKREEQGYLHGIRVTPDGMQISHLFFADDAVIFCKATEVEVRGILEVLQ 276

Query: 182 IYKLFSGQKVNLEKSSIF 235
            Y   SGQ +N EK S++
Sbjct: 277 CYAAASGQIINREKCSLY 294


>ref|XP_009145555.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica rapa]
          Length = 900

 Score =  221 bits (564), Expect(3) = 2e-82
 Identities = 103/275 (37%), Positives = 166/275 (60%), Gaps = 3/275 (1%)
 Frame = +1

Query: 313  KYLGLPLGIGKSKKEVFRYVVDAVQGRICSWKNMFLSTAGREVLIKAVLESLPVYVMSVF 492
            KYLGLP  +G  K E+F Y+++ V+    SWK  +LST G+EVL+KA+  ++P++ M++F
Sbjct: 282  KYLGLPEQVGSKKSEMFAYIIEKVKSVTQSWKQRYLSTGGKEVLLKAIAVAMPIFSMNIF 341

Query: 493  KLPIGICKEICRCFANFWWGDNVEKKHKLHWKSWTKLALDKEEGGLGFHDIQLFNEALMV 672
            +LP  +C EI    A FWWG   +K   LHW SW ++++ K EGGLGF D+++FN+AL+ 
Sbjct: 342  RLPKEVCAEINAVLAKFWWGAGDKKG--LHWYSWDRVSVPKREGGLGFKDLEIFNQALLS 399

Query: 673  KQLWRVLSQPALLVSKVIKARYFPKGNFFDVEPTQSASWMWNCWIKLKDILRMGLRYKVG 852
            KQ+WRV+  P  L+++++KARYFP+ +  + +  + AS+ W   +  +D++  G+RY +G
Sbjct: 400  KQVWRVMQHPHCLMARILKARYFPEEDILNAKLKKKASYPWKSILHGRDLINKGMRYIIG 459

Query: 853  NGKSIRIWDSPWLPEAMNFKPTRTNQR*GD---PVWVSELLEDGGSSWNSSLVFSLFDKA 1023
            +G  + +W  PW+P+     P R+ +  G       V E     G  WN   +  +    
Sbjct: 460  DGSLVNMWTDPWIPD----HPPRSPRARGVYQLEEKVREYFNTTGDQWNEQKLREMIIDE 515

Query: 1024 DAEKILKIRGMQEGKKDVLWWHLENLGSYSVKSAY 1128
            D +KIL ++     ++D+L WH    G Y+VKS Y
Sbjct: 516  DVDKILALKISPVAQQDLLGWHYNEDGIYTVKSGY 550



 Score = 72.4 bits (176), Expect(3) = 2e-82
 Identities = 43/129 (33%), Positives = 69/129 (53%), Gaps = 3/129 (2%)
 Frame = +2

Query: 1202 VREKRSWKLNVKGKIKHFIWKCFSDILPSNCNLRKKWMAVDTICQICGEADETTEHIFFE 1381
            V + + WK     K+KHF+W+  S  L +  NL+++ +  +  C+ C  A ET +HIFFE
Sbjct: 570  VLKHKVWKTKAPAKLKHFLWRVLSRSLATGNNLKRRHIIQNDQCRRCCLAIETADHIFFE 629

Query: 1382 CRRAKIIWKLSPVSWEGVCDEVHSFPIWWGKVCGVGKDACS*NRLH---LTTYILWWLWK 1552
            C  AKIIW+ S VS   + +   +      K+    + + S    H   L  ++LW +WK
Sbjct: 630  CPYAKIIWRASGVSNLIINNSSSTLE---EKIEACLQCSLSTRLSHMQDLPFWLLWRIWK 686

Query: 1553 TRNLWIFQK 1579
            +RN  IF++
Sbjct: 687  SRNTLIFRQ 695



 Score = 63.9 bits (154), Expect(3) = 2e-82
 Identities = 35/77 (45%), Positives = 45/77 (58%)
 Frame = +2

Query: 2   LIISEVFSSLIKAAVXXXXXXXXRICKKGPMITHLLFADDSLVFCEASEDQAKALLYIFH 181
           ++ +EV S L+  A+        +I    P + HLLFADDSL F  A+E  AK L  IF 
Sbjct: 178 ILCAEVLSHLMTRAMMDRSLLGVKISNNAPAVNHLLFADDSLFFSLANERAAKKLKTIFS 237

Query: 182 IYKLFSGQKVNLEKSSI 232
           IY+  SGQ +NL KSSI
Sbjct: 238 IYEAVSGQAINLTKSSI 254


>ref|XP_009140270.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica rapa]
          Length = 866

 Score =  229 bits (584), Expect(3) = 7e-82
 Identities = 114/294 (38%), Positives = 172/294 (58%), Gaps = 4/294 (1%)
 Frame = +1

Query: 259  VQDNICGMFRGIAKHHSS----KYLGLPLGIGKSKKEVFRYVVDAVQGRICSWKNMFLST 426
            V+D +    R +   H+     KYLG+P   G+ K E+ +YV + V+ +   W+N FLS 
Sbjct: 227  VKDQVKTQMRHLLGIHNEGGGGKYLGIPEQFGRKKAEILKYVTEKVKTKTQGWQNKFLSP 286

Query: 427  AGREVLIKAVLESLPVYVMSVFKLPIGICKEICRCFANFWWGDNVEKKHKLHWKSWTKLA 606
             G+EVLIK+V  +  VY M+ FKLP  +C+EI    A FWWG +   K  +HW +W +++
Sbjct: 287  GGKEVLIKSVASATSVYPMNTFKLPKSVCEEINNILATFWWGKDDGSKG-MHWFAWNRMS 345

Query: 607  LDKEEGGLGFHDIQLFNEALMVKQLWRVLSQPALLVSKVIKARYFPKGNFFDVEPTQSAS 786
            L K+EGG+GF DI+ FN+AL+ KQ WR+L++P  L+++V+K RYFP  +  +   T+  S
Sbjct: 346  LPKKEGGMGFRDIEKFNDALLGKQAWRILTKPNSLMARVMKGRYFPSTSILNARETRQNS 405

Query: 787  WMWNCWIKLKDILRMGLRYKVGNGKSIRIWDSPWLPEAMNFKPTRTNQR*GDPVWVSELL 966
            ++W   +  KD+L  G+R  +GNG +I  W  PWLP      P     + G+   VS+ +
Sbjct: 406  YIWRSILHGKDLLTKGVRCVIGNGNTIDTWTDPWLPTNPPRAPVPIFDQHGNSK-VSDFM 464

Query: 967  EDGGSSWNSSLVFSLFDKADAEKILKIRGMQEGKKDVLWWHLENLGSYSVKSAY 1128
              G   WN  L+ +  ++ADAE+IL I+     + D L WH    G Y+VKS Y
Sbjct: 465  HRGLKEWNEELIRNTMNQADAEEILAIKLCSSDEDDQLVWHYNKTGDYTVKSGY 518



 Score = 72.0 bits (175), Expect(3) = 7e-82
 Identities = 46/144 (31%), Positives = 72/144 (50%), Gaps = 4/144 (2%)
 Frame = +2

Query: 1220 WKLNVKGKIKHFIWKCFSDILPSNCNLRKKWMAVDTICQICGEADETTEHIFFECRRAKI 1399
            WKLN   K+K F+WK  +  LP   NL+++ +     C  C + +ET +H+FF+C  A+ 
Sbjct: 544  WKLNTAPKVKQFMWKMITLSLPLGKNLQRRHITNSVKCPHCYQ-EETADHLFFDCINAQC 602

Query: 1400 IWKLSPVSWEGVCDEVHSFPIWWGKVCGVGKDACS*NRL-HLTTYILWWLWKTRNLWIFQ 1576
            IW+ S     G+     +       +  + +DA   + L  L  +ILW +WK RN  IFQ
Sbjct: 603  IWRASGYPNSGLLRSQVTLEAKLSLL--LNQDATIPDHLKQLPWWILWRIWKDRNKMIFQ 660

Query: 1577 KVLKPEKLTVDCAW---AEWNEFQ 1639
            + L   +  +  A+    EW E Q
Sbjct: 661  QKLTHWRYLLQAAYQDTKEWMEAQ 684



 Score = 55.1 bits (131), Expect(3) = 7e-82
 Identities = 30/77 (38%), Positives = 41/77 (53%)
 Frame = +2

Query: 2   LIISEVFSSLIKAAVXXXXXXXXRICKKGPMITHLLFADDSLVFCEASEDQAKALLYIFH 181
           ++ +EV S ++  A         +I    P + HLLFADDSL F  A+    +A+  I  
Sbjct: 145 ILCAEVLSHMMTRAAMKRKIQGIKISTHSPSVNHLLFADDSLFFSLANPKNGRAIKQILQ 204

Query: 182 IYKLFSGQKVNLEKSSI 232
            Y+  SGQ VNL KSSI
Sbjct: 205 QYEKVSGQAVNLNKSSI 221


>ref|XP_008372934.1| PREDICTED: putative ribonuclease H protein At1g65750 [Malus
            domestica]
          Length = 961

 Score =  213 bits (542), Expect(3) = 9e-82
 Identities = 110/302 (36%), Positives = 162/302 (53%)
 Frame = +1

Query: 235  FSRNTPNSVQDNICGMFRGIAKHHSSKYLGLPLGIGKSKKEVFRYVVDAVQGRICSWKNM 414
            FS  T   V+  I  +    ++    KYLGL    G SKK VF  + + ++ R+  W   
Sbjct: 301  FSPKTKKRVKKEIVHVLNIQSREGFGKYLGLQADFGLSKKAVFGEIRERIESRMVGWAEQ 360

Query: 415  FLSTAGREVLIKAVLESLPVYVMSVFKLPIGICKEICRCFANFWWGDNVEKKHKLHWKSW 594
            FLS AG+E+LIKAV  ++P Y MS FKLPIG+CK+I +   N+WW  + ++K  +HW +W
Sbjct: 361  FLSQAGKEILIKAVAMAMPNYAMSCFKLPIGVCKDIEKAVRNYWWRGSGDRKG-IHWVAW 419

Query: 595  TKLALDKEEGGLGFHDIQLFNEALMVKQLWRVLSQPALLVSKVIKARYFPKGNFFDVEPT 774
             K+   K  GGLGF DIQ FN AL+ K  WR+  QP  L++ V++ +YFP   F +    
Sbjct: 420  EKIRSQKRNGGLGFKDIQCFNLALLAKIGWRITLQPBSLJANVLREKYFPGKTFREASGG 479

Query: 775  QSASWMWNCWIKLKDILRMGLRYKVGNGKSIRIWDSPWLPEAMNFKPTRTNQR*GDPVWV 954
            +  SW W    + + +L  G+R++VG+G  I I + PW P+   FK           + V
Sbjct: 480  RGTSWGWKGIFEARKVLDKGIRWRVGDGNCINIREDPWFPKPSTFKARVXEGL--QAIMV 537

Query: 955  SELLEDGGSSWNSSLVFSLFDKADAEKILKIRGMQEGKKDVLWWHLENLGSYSVKSAYSK 1134
             +L++ G   W + +V   F + D   IL I   + G  D L WH    G Y+V++ Y  
Sbjct: 538  RDLIDPGSREWKTDMVKGGFLEKDVTSILSIPLSRYGMSDXLIWHHXRNGEYTVRTGYGV 597

Query: 1135 LL 1140
             L
Sbjct: 598  AL 599



 Score = 84.7 bits (208), Expect(3) = 9e-82
 Identities = 46/126 (36%), Positives = 64/126 (50%), Gaps = 5/126 (3%)
 Frame = +2

Query: 1220 WKLNVKGKIKHFIWKCFSDILPSNCNLRKKWMAVDTICQICGEADETTEHIFFECRRAKI 1399
            W L V  K+K F+WKC ++ L    NL+++ + V   C+ C + DET  H+FF C  + I
Sbjct: 629  WNLEVPNKMKFFVWKCCNNALAVRRNLKRRXLRVXNFCEGCMQPDETENHLFFRCEISHI 688

Query: 1400 IWKLSPVSWEGVCDEVHSFPIWWGKVCG--VGKDACS*NRLHLT---TYILWWLWKTRNL 1564
             W  SP+    +  E + F   WG  CG   GK+    N   L     + LW LWK RN 
Sbjct: 689  FWFCSPLQINSLELEGNDFLASWGSFCGRVKGKE----NEXELMQEFVFGLWHLWKNRND 744

Query: 1565 WIFQKV 1582
             IF+ V
Sbjct: 745  LIFKGV 750



 Score = 58.2 bits (139), Expect(3) = 9e-82
 Identities = 31/77 (40%), Positives = 44/77 (57%)
 Frame = +2

Query: 2   LIISEVFSSLIKAAVXXXXXXXXRICKKGPMITHLLFADDSLVFCEASEDQAKALLYIFH 181
           L+ +E FS LI+  +        R+   G  I+HL FADDS++FC AS + A  +  I  
Sbjct: 223 LLCTEGFSXLIRKGLENGSLHGIRVSPTGRPISHLFFADDSVLFCNASVEDAXGVGEILR 282

Query: 182 IYKLFSGQKVNLEKSSI 232
            Y   SGQ++N+ KSSI
Sbjct: 283 AYASGSGQEINMTKSSI 299


>ref|XP_013658143.1| PREDICTED: uncharacterized protein LOC106362852 [Brassica napus]
          Length = 1350

 Score =  207 bits (527), Expect(3) = 3e-81
 Identities = 97/272 (35%), Positives = 155/272 (56%)
 Frame = +1

Query: 313  KYLGLPLGIGKSKKEVFRYVVDAVQGRICSWKNMFLSTAGREVLIKAVLESLPVYVMSVF 492
            KYLGLP   G  K E+F Y+++ V+    SWK   LS  G+EVL+K++  +LP+Y M+VF
Sbjct: 729  KYLGLPEQFGSKKGEMFAYIIEKVKSVTQSWKQKHLSPGGKEVLLKSIALALPIYSMNVF 788

Query: 493  KLPIGICKEICRCFANFWWGDNVEKKHKLHWKSWTKLALDKEEGGLGFHDIQLFNEALMV 672
            +LP  +C+ I    A FWWG    K   +HW SW ++ + K EGGLGF D++ FN+AL+ 
Sbjct: 789  RLPKEVCELINNLLAKFWWGKGDRKG--MHWYSWKRVCVPKREGGLGFRDLETFNQALLG 846

Query: 673  KQLWRVLSQPALLVSKVIKARYFPKGNFFDVEPTQSASWMWNCWIKLKDILRMGLRYKVG 852
            KQ+WR+L  P+ L+++++KARYFP     +      AS+ W   +  K+++  G++Y +G
Sbjct: 847  KQVWRILQHPSCLMARILKARYFPDCTILEAVQKTKASYAWKSILYGKELVTKGMKYVIG 906

Query: 853  NGKSIRIWDSPWLPEAMNFKPTRTNQR*GDPVWVSELLEDGGSSWNSSLVFSLFDKADAE 1032
            +G    +W  PW+P+     P   +        V +    G + W+ S +       D E
Sbjct: 907  DGSHANMWTDPWIPDHPPRPPRALDNSSVTDCKVRDFFVVGRNEWDVSKLREDVVHEDVE 966

Query: 1033 KILKIRGMQEGKKDVLWWHLENLGSYSVKSAY 1128
            +IL+++     ++D++ WH    G Y+VKS Y
Sbjct: 967  RILRLKISPHAQQDLMGWHYNEDGLYTVKSGY 998



 Score = 87.4 bits (215), Expect(3) = 3e-81
 Identities = 50/148 (33%), Positives = 79/148 (53%), Gaps = 3/148 (2%)
 Frame = +2

Query: 1205 REKRSWKLNVKGKIKHFIWKCFSDILPSNCNLRKKWMAVDTICQICGEADETTEHIFFEC 1384
            +++R WK  V  KIKHF+WK  S  LP+  NL+++ +    +C+ CG  DET  H+FF C
Sbjct: 1019 QKQRIWKTKVPSKIKHFVWKMLSKSLPTGENLKRRHVTQQALCRRCGLEDETEHHLFFNC 1078

Query: 1385 RRAKIIWKLSPVSWEGVCDEVHSFPIWWGKVCGVGKDACS*NRLHLTT---YILWWLWKT 1555
              A+ +W+ S +S   +     +F     K+    + + S    HL     +ILW LWK+
Sbjct: 1079 PYAQCVWRASGISNMIITSTTTTFE---EKIEACLQCSTSVRLSHLQDLPWWILWRLWKS 1135

Query: 1556 RNLWIFQKVLKPEKLTVDCAWAEWNEFQ 1639
            RN  IFQ+     +  +  A A+ NE++
Sbjct: 1136 RNQMIFQQKGYHWQNVIKYAKADANEWK 1163



 Score = 59.3 bits (142), Expect(3) = 3e-81
 Identities = 35/97 (36%), Positives = 49/97 (50%)
 Frame = +2

Query: 2   LIISEVFSSLIKAAVXXXXXXXXRICKKGPMITHLLFADDSLVFCEASEDQAKALLYIFH 181
           ++ +EV S ++  A+        +I  + P + HLLFADDSL F  A+   A  L  IF 
Sbjct: 625 ILCAEVLSHMMNQAMANRSLLGIKIANQAPPVNHLLFADDSLFFSLANRRAALKLKSIFK 684

Query: 182 IYKLFSGQKVNLEKSSIFSAGIPLILCKTIFVGCLGV 292
           +Y+  SGQ +NL KSSI          KT     LG+
Sbjct: 685 LYEEVSGQSINLSKSSILFGSKVQAHTKTQMRNLLGI 721


>ref|XP_008355389.1| PREDICTED: putative ribonuclease H protein At1g65750 [Malus
            domestica]
          Length = 883

 Score =  209 bits (533), Expect(3) = 9e-81
 Identities = 111/299 (37%), Positives = 162/299 (54%)
 Frame = +1

Query: 232  FFSRNTPNSVQDNICGMFRGIAKHHSSKYLGLPLGIGKSKKEVFRYVVDAVQGRICSWKN 411
            FF  +T   ++  I        K    KYLGL    G SKK VF  + D ++ R+  W  
Sbjct: 222  FFGTSTSKRIKKRIGNTLGIPHKDGFGKYLGLQADFGLSKKAVFXEIRDKMEARLAGWSE 281

Query: 412  MFLSTAGREVLIKAVLESLPVYVMSVFKLPIGICKEICRCFANFWWGDNVEKKHKLHWKS 591
             FLS AG+EVLIKAV   LP + MS FKLPIG+C+++ +   ++WW  N +K+   HW S
Sbjct: 282  QFLSQAGKEVLIKAVAMXLPNFAMSCFKLPIGVCRDMEKAVRSYWWRGNSQKRG-CHWAS 340

Query: 592  WTKLALDKEEGGLGFHDIQLFNEALMVKQLWRVLSQPALLVSKVIKARYFPKGNFFDVEP 771
            W KL   K  GGLGF DIQ FN A + K  WR++  P  L++ V++ +Y+P   F D   
Sbjct: 341  WDKLMKQKSAGGLGFKDIQCFNLAFLAKIGWRLIQNPTSLLANVLRDKYYPGKCFKDAGK 400

Query: 772  TQSASWMWNCWIKLKDILRMGLRYKVGNGKSIRIWDSPWLPEAMNFKPTRTNQR*GDPVW 951
             ++ SW W    + + +L+ G+R++VG+G+SI I   PWLP    F     +    + + 
Sbjct: 401  GRNTSWGWKGIFESRTVLQHGVRWRVGDGESINIRKDPWLPTPTTFLAKPLDNL--EEIK 458

Query: 952  VSELLEDGGSSWNSSLVFSLFDKADAEKILKIRGMQEGKKDVLWWHLENLGSYSVKSAY 1128
            V +L++    SW   ++   F++ +A  IL I   + G  D L WH    G YSVK+ Y
Sbjct: 459  VRDLIDPISKSWKEGVITEGFNREEARTILSIPLSKSGCLDRLVWHYTVNGDYSVKTGY 517



 Score = 79.0 bits (193), Expect(3) = 9e-81
 Identities = 47/137 (34%), Positives = 66/137 (48%), Gaps = 1/137 (0%)
 Frame = +2

Query: 1211 KRSWKLNVKGKIKHFIWKCFSDILPSNCNLRKKWMAVDTICQICGEADETTEHIFFECRR 1390
            KR WKL V  KIK F+WKC +  L    NL+++ + V+ IC +C   DE+  H+FF+C  
Sbjct: 548  KRIWKLQVPNKIKFFLWKCCNKALAVRHNLQRRQIRVENICGVCNTFDESENHLFFQCDF 607

Query: 1391 AKIIWKLSPVSWEGVCDEVHSFPIWWGKVCGVGKDACS*NR-LHLTTYILWWLWKTRNLW 1567
            +   W  SP+           F   W K+C   K+       L    + LW LWK RN  
Sbjct: 608  SHRFWFGSPLHINSHELAGADFLENWDKICTSTKNMDKAEEILQEVAFGLWRLWKNRNDV 667

Query: 1568 IFQKVLKPEKLTVDCAW 1618
            +F  V + + L V   W
Sbjct: 668  VFNGVHR-QHLEVMMLW 683



 Score = 63.9 bits (154), Expect(3) = 9e-81
 Identities = 34/78 (43%), Positives = 48/78 (61%)
 Frame = +2

Query: 2   LIISEVFSSLIKAAVXXXXXXXXRICKKGPMITHLLFADDSLVFCEASEDQAKALLYIFH 181
           LI +E FSSLIK  +        R    G  +THL FADDS++F  A+ ++A+ ++ I +
Sbjct: 145 LICTEGFSSLIKKGMECGVLHGYRFTPNGSPLTHLFFADDSVLFGNATVEEAQGVVDILN 204

Query: 182 IYKLFSGQKVNLEKSSIF 235
            Y   SGQ++NL KSSIF
Sbjct: 205 TYAXGSGQEINLSKSSIF 222


>ref|XP_008367240.1| PREDICTED: putative ribonuclease H protein At1g65750 [Malus
            domestica]
          Length = 806

 Score =  209 bits (533), Expect(3) = 9e-81
 Identities = 111/299 (37%), Positives = 162/299 (54%)
 Frame = +1

Query: 232  FFSRNTPNSVQDNICGMFRGIAKHHSSKYLGLPLGIGKSKKEVFRYVVDAVQGRICSWKN 411
            FF  +T   ++  I        K    KYLGL    G SKK VF  + D ++ R+  W  
Sbjct: 194  FFGTSTSKRIKKRIGNTLGIPHKDGFGKYLGLQADFGLSKKAVFXEIRDKMEARLAGWSE 253

Query: 412  MFLSTAGREVLIKAVLESLPVYVMSVFKLPIGICKEICRCFANFWWGDNVEKKHKLHWKS 591
             FLS AG+EVLIKAV   LP + MS FKLPIG+C+++ +   ++WW  N +K+   HW S
Sbjct: 254  QFLSQAGKEVLIKAVAMXLPNFAMSCFKLPIGVCRDMEKAVRSYWWRGNSQKRG-CHWAS 312

Query: 592  WTKLALDKEEGGLGFHDIQLFNEALMVKQLWRVLSQPALLVSKVIKARYFPKGNFFDVEP 771
            W KL   K  GGLGF DIQ FN A + K  WR++  P  L++ V++ +Y+P   F D   
Sbjct: 313  WDKLMKQKSAGGLGFKDIQCFNLAFLAKIGWRLIQNPTSLLANVLRDKYYPGKCFKDAGK 372

Query: 772  TQSASWMWNCWIKLKDILRMGLRYKVGNGKSIRIWDSPWLPEAMNFKPTRTNQR*GDPVW 951
             ++ SW W    + + +L+ G+R++VG+G+SI I   PWLP    F     +    + + 
Sbjct: 373  GRNTSWGWKGIFESRTVLQHGVRWRVGDGESINIRKDPWLPTPTTFLAKPLDNL--EEIK 430

Query: 952  VSELLEDGGSSWNSSLVFSLFDKADAEKILKIRGMQEGKKDVLWWHLENLGSYSVKSAY 1128
            V +L++    SW   ++   F++ +A  IL I   + G  D L WH    G YSVK+ Y
Sbjct: 431  VRDLIDPISKSWKEGVITEGFNREEARTILSIPLSKSGCLDRLVWHYTVNGDYSVKTGY 489



 Score = 79.0 bits (193), Expect(3) = 9e-81
 Identities = 47/137 (34%), Positives = 66/137 (48%), Gaps = 1/137 (0%)
 Frame = +2

Query: 1211 KRSWKLNVKGKIKHFIWKCFSDILPSNCNLRKKWMAVDTICQICGEADETTEHIFFECRR 1390
            KR WKL V  KIK F+WKC +  L    NL+++ + V+ IC +C   DE+  H+FF+C  
Sbjct: 520  KRIWKLQVPNKIKFFLWKCCNKALAVRHNLQRRQIRVENICGVCNTFDESENHLFFQCDF 579

Query: 1391 AKIIWKLSPVSWEGVCDEVHSFPIWWGKVCGVGKDACS*NR-LHLTTYILWWLWKTRNLW 1567
            +   W  SP+           F   W K+C   K+       L    + LW LWK RN  
Sbjct: 580  SHRFWFGSPLHINSHELAGADFLENWDKICTSTKNMDKAEEILQEVAFGLWRLWKNRNDV 639

Query: 1568 IFQKVLKPEKLTVDCAW 1618
            +F  V + + L V   W
Sbjct: 640  VFNGVHR-QHLEVMMLW 655



 Score = 63.9 bits (154), Expect(3) = 9e-81
 Identities = 35/78 (44%), Positives = 49/78 (62%)
 Frame = +2

Query: 2   LIISEVFSSLIKAAVXXXXXXXXRICKKGPMITHLLFADDSLVFCEASEDQAKALLYIFH 181
           LI +E FSSLIK  +        R    G  +THL FADDS++F  A+ ++A+ ++ I +
Sbjct: 117 LICTEGFSSLIKKGMEXGVLHGYRFTPNGSPLTHLFFADDSVLFGNATVEEAQGVVDILN 176

Query: 182 IYKLFSGQKVNLEKSSIF 235
            Y   SGQ++NL KSSIF
Sbjct: 177 TYAXGSGQEINLSKSSIF 194


>ref|XP_008387184.1| PREDICTED: putative ribonuclease H protein At1g65750 [Malus
            domestica]
          Length = 887

 Score =  217 bits (553), Expect(3) = 1e-80
 Identities = 119/300 (39%), Positives = 168/300 (56%), Gaps = 1/300 (0%)
 Frame = +1

Query: 232  FFSRNTPNSVQDNICGMFRGIAKHHSSKYLGLPLGIGKSKKEVFRYVVDAVQGRICSWKN 411
            +F    P   +  I      +      +YLGL    G SKK VF  V +A++GRI  W  
Sbjct: 309  YFGNQCPRKQRRLIESCTNFVGNETFGRYLGLSADFGASKKVVFEGVREALEGRINGWAE 368

Query: 412  MFLSTAGREVLIKAVLESLPVYVMSVFKLPIGICKEICRCFANFWWGDNVEKKHKLHWKS 591
             FLS AG+EV+IK V  +LP Y MS FKLP+ +CKE+    ANFWW  + EK + +HW S
Sbjct: 369  QFLSPAGKEVMIKTVAMALPNYAMSCFKLPVNLCKEMETNIANFWWRGSREK-NGMHWIS 427

Query: 592  WTKLALDKEEGGLGFHDIQLFNEALMVKQLWRVLSQPALLVSKVIKARYFPKGNFFDVEP 771
            W K+   K+ GGLGF DI  FN A + K  WR+L+ P  L+ K++K +YFP+ +F + + 
Sbjct: 428  WEKMKRRKKVGGLGFRDILSFNLAYLTKIGWRILTNPLSLLGKILKEKYFPECSFMEAKV 487

Query: 772  TQSASWMWNCWIKLKDILRMGLRYKVGNGKSIRIWDSPWLPEAMNFKPTRTNQR*GD-PV 948
             + +SW W   ++ K IL  G R++VG+G SIR+   PWLP    F   R N    D PV
Sbjct: 488  GKRSSWGWKGIMQGKRILERGRRWRVGDGSSIRVKIDPWLPRPHTF---RVNSNHPDMPV 544

Query: 949  WVSELLEDGGSSWNSSLVFSLFDKADAEKILKIRGMQEGKKDVLWWHLENLGSYSVKSAY 1128
             V +L++    SW   LV   F++ ++  IL I    EG  D + WH  + G Y+V++ Y
Sbjct: 545  MVKDLIDPVTGSWMVELVKGCFEEEESNIILGIPTXLEGCDDRIIWHXTSNGDYTVRTGY 604



 Score = 80.5 bits (197), Expect(3) = 1e-80
 Identities = 40/120 (33%), Positives = 61/120 (50%), Gaps = 1/120 (0%)
 Frame = +2

Query: 1220 WKLNVKGKIKHFIWKCFSDILPSNCNLRKKWMAVDTICQICGEADETTEHIFFECRRAKI 1399
            W+L V  K+K FIW+C    L    NL ++ M V+T C +CG+A ET  H+FFEC  +++
Sbjct: 638  WRLEVPNKMKFFIWRCCXSSLAVRGNLHRRRMRVNTACVLCGDARETEHHLFFECEFSRV 697

Query: 1400 IWKLSPVSWEGVCDEVHSFPIWWGKVCG-VGKDACS*NRLHLTTYILWWLWKTRNLWIFQ 1576
             W   P+  +        F   W  +C    K+      L    +I+W +WK RN  +F+
Sbjct: 698  FWFSCPLQLDITFASGKEFGDCWHXLCNRFRKEKNHVLILQECVFIMWRIWKCRNDLMFK 757



 Score = 54.3 bits (129), Expect(3) = 1e-80
 Identities = 25/78 (32%), Positives = 46/78 (58%)
 Frame = +2

Query: 2   LIISEVFSSLIKAAVXXXXXXXXRICKKGPMITHLLFADDSLVFCEASEDQAKALLYIFH 181
           LI +E  S++++           R+  +G  I+HL FADD+++FC+A+E + + +L + +
Sbjct: 232 LICAEGLSAMLRKREEHGSLHGIRVTPEGMQISHLFFADDAVIFCKATEVEVREILEVLN 291

Query: 182 IYKLFSGQKVNLEKSSIF 235
            Y   SGQ +N  K S++
Sbjct: 292 CYAEASGQIINRAKCSLY 309


>ref|XP_009113843.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica rapa]
          Length = 896

 Score =  228 bits (581), Expect(3) = 2e-80
 Identities = 113/295 (38%), Positives = 173/295 (58%), Gaps = 5/295 (1%)
 Frame = +1

Query: 259  VQDNICGMFRGIAKHHSS----KYLGLPLGIGKSKKEVFRYVVDAVQGRICSWKNMFLST 426
            V+D +    R I   H+     KYLG+P   G+ K E   YVV  V+ +   W + FLS 
Sbjct: 256  VKDQVKTQMRNILGIHNEGGGGKYLGIPEQFGRKKTENLEYVVATVKAKTNGWHHRFLSP 315

Query: 427  AGREVLIKAVLESLPVYVMSVFKLPIGICKEICRCFANFWWGDNVEKKHKLHWKSWTKLA 606
             G+EVL K++  + PVY M+VFK+P  +C +I    A FWWG +   K  +HW +W +++
Sbjct: 316  GGKEVLTKSIASATPVYPMNVFKMPKKVCDDINNTLAQFWWGKSDGSKG-MHWFAWQRMS 374

Query: 607  LDKEEGGLGFHDIQLFNEALMVKQLWRVLSQPALLVSKVIKARYFPKGNFFDVEPTQSAS 786
            L K+EGG+GF D + FN+AL+ KQ+WR+L +P  L+++V+K +YFP  N       + +S
Sbjct: 375  LPKKEGGMGFRDFEKFNDALLAKQVWRILIKPNSLMARVLKGKYFPNSNILKAGTKKQSS 434

Query: 787  WMWNCWIKLKDILRMGLRYKVGNGKSIRIWDSPWLPEAMNFKPTRTNQR*GDPVW-VSEL 963
            ++WN  +  + +L+ GLR+ +GNG+S+ +W  PWLP +    P   +Q   +P+  VSEL
Sbjct: 435  YIWNSLLHGQALLKRGLRFIIGNGESVSLWADPWLPTSPPRSPIPKDQ--SNPMTKVSEL 492

Query: 964  LEDGGSSWNSSLVFSLFDKADAEKILKIRGMQEGKKDVLWWHLENLGSYSVKSAY 1128
            ++   + WN  L+     +ADAE+IL ++       D L WH    G YSVKS Y
Sbjct: 493  MKQNQTGWNEELIRHTIVEADAEEILSMKLCAYADTDPLVWHYNKSGEYSVKSGY 547



 Score = 72.4 bits (176), Expect(3) = 2e-80
 Identities = 43/143 (30%), Positives = 70/143 (48%), Gaps = 4/143 (2%)
 Frame = +2

Query: 1220 WKLNVKGKIKHFIWKCFSDILPSNCNLRKKWMAVDTICQICGEADETTEHIFFECRRAKI 1399
            WKL    K++HF+WK  +  LP   NL+++ +     C  C + +ETTEH+FFEC  A+ 
Sbjct: 573  WKLPTAPKLQHFLWKMVTSSLPLGSNLQRRHVTTSVKCPHC-QQEETTEHLFFECFYAQR 631

Query: 1400 IWKLS----PVSWEGVCDEVHSFPIWWGKVCGVGKDACS*NRLHLTTYILWWLWKTRNLW 1567
            IW+ S     + ++              K+  +       +  HL  +ILW +WK RN  
Sbjct: 632  IWRASGLPHNIFYQAQSTLEDKLMALLQKIPNLPD-----HLRHLPWWILWRIWKCRNKM 686

Query: 1568 IFQKVLKPEKLTVDCAWAEWNEF 1636
            IFQ+     + T+  A+ +  E+
Sbjct: 687  IFQQTSIHWRTTLQSAYFDTKEW 709



 Score = 51.2 bits (121), Expect(3) = 2e-80
 Identities = 29/77 (37%), Positives = 40/77 (51%)
 Frame = +2

Query: 2   LIISEVFSSLIKAAVXXXXXXXXRICKKGPMITHLLFADDSLVFCEASEDQAKALLYIFH 181
           ++ + V S L+  A         +I  +   + HLLFADDSL F  A+    +A+  I  
Sbjct: 174 ILCANVLSHLMTKAAADRKIQGMKISTQSTAVNHLLFADDSLFFTLANPKNGRAIKRILS 233

Query: 182 IYKLFSGQKVNLEKSSI 232
            Y+  SGQ VNL KSSI
Sbjct: 234 QYERISGQAVNLSKSSI 250


>ref|XP_008356436.1| PREDICTED: putative ribonuclease H protein At1g65750 [Malus
            domestica]
          Length = 1089

 Score =  208 bits (530), Expect(3) = 2e-80
 Identities = 115/299 (38%), Positives = 161/299 (53%)
 Frame = +1

Query: 232  FFSRNTPNSVQDNICGMFRGIAKHHSSKYLGLPLGIGKSKKEVFRYVVDAVQGRICSWKN 411
            FFS  T N ++  I        K    KYLGL    G SKK VF  V D V  R+  W  
Sbjct: 428  FFSPKTSNRIKMEIEETLGIQCKQGFGKYLGLQADFGLSKKVVFAEVRDKVXARLXGWTE 487

Query: 412  MFLSTAGREVLIKAVLESLPVYVMSVFKLPIGICKEICRCFANFWWGDNVEKKHKLHWKS 591
             FLS  G+EVLIKAV  +LP Y MS FKLPIG+C+++ +   NFW   N ++K  +HW S
Sbjct: 488  QFLSQXGKEVLIKAVAMALPNYAMSCFKLPIGVCRDVEKAIXNFWXKGNDQRKX-VHWVS 546

Query: 592  WTKLALDKEEGGLGFHDIQLFNEALMVKQLWRVLSQPALLVSKVIKARYFPKGNFFDVEP 771
            W ++   K+ GGLGF DIQ FN A + K  WR+   P+ +++ V + +Y P  +F +   
Sbjct: 547  WERVTKQKKSGGLGFKDIQCFNLAFLAKIGWRLSLNPSSJLASVFRDKYHPGRSFNEAGR 606

Query: 772  TQSASWMWNCWIKLKDILRMGLRYKVGNGKSIRIWDSPWLPEAMNFKPTRTNQR*GDPVW 951
             ++ SW W        +L+ G+R++VGNG  I I +  W P+   F+         D   
Sbjct: 607  GKNTSWGWKGIFXAXKVLQNGIRWRVGNGXCINIREDXWFPKPSTFRIRPREDL--DATM 664

Query: 952  VSELLEDGGSSWNSSLVFSLFDKADAEKILKIRGMQEGKKDVLWWHLENLGSYSVKSAY 1128
            VS+L+  G +SW ++++ + F + DA  IL I   Q G +D L  H    G YSVKS Y
Sbjct: 665  VSDLIXPGSNSWKANIISASFHREDAVTILSIXLSQFGXEDRLVXHHSXNGVYSVKSGY 723



 Score = 84.0 bits (206), Expect(3) = 2e-80
 Identities = 48/144 (33%), Positives = 68/144 (47%), Gaps = 2/144 (1%)
 Frame = +2

Query: 1214 RSWKLNVKGKIKHFIWKCFSDILPSNCNLRKKWMAVDTICQICGEADETTEHIFFECRRA 1393
            R W+L V  KIK FIW+C S+ L    NL+++ M VD +C +C   DET   +FF C+ +
Sbjct: 755  RIWRLQVXNKIKXFIWRCCSNALAXRSNLQRRHMRVDNVCGVCNALDETENXLFFRCKFS 814

Query: 1394 KIIWKLSPVSWEGVCDEVHSFPIWWGKV--CGVGKDACS*NRLHLTTYILWWLWKTRNLW 1567
             + W  SP+       E   F   WG    C  G++           + LW LWK RN  
Sbjct: 815  HLFWFCSPLHLNSHELEXVDFLESWGXFHECVKGRENAD-EICQEFAFGLWRLWKNRNDX 873

Query: 1568 IFQKVLKPEKLTVDCAWAEWNEFQ 1639
            +F  + +     VD      NEF+
Sbjct: 874  VFNGLHRQPLEVVDLWRKNINEFR 897



 Score = 58.9 bits (141), Expect(3) = 2e-80
 Identities = 30/78 (38%), Positives = 46/78 (58%)
 Frame = +2

Query: 2   LIISEVFSSLIKAAVXXXXXXXXRICKKGPMITHLLFADDSLVFCEASEDQAKALLYIFH 181
           L+ +E  S L++  +        R    G  +THLLFADD +VF   + D+AKA++ +  
Sbjct: 351 LLCTEGXSMLLRKGLEQGALHGFRFTPNGIPLTHLLFADDXVVFGNXTVDEAKAVVEVLK 410

Query: 182 IYKLFSGQKVNLEKSSIF 235
           +Y   SGQ++NL KSS+F
Sbjct: 411 VYARGSGQEINLTKSSVF 428


>ref|XP_008391838.1| PREDICTED: uncharacterized protein LOC103454030 [Malus domestica]
          Length = 1374

 Score =  211 bits (538), Expect(3) = 6e-80
 Identities = 113/305 (37%), Positives = 166/305 (54%), Gaps = 2/305 (0%)
 Frame = +1

Query: 232  FFSRNTPNSVQDNICGMFRGIAKHHSSKYLGLPLGIGKSKKEVFRYVVDAVQGRICSWKN 411
            FF  +T    +  I        K    KYLGL    G SKK VF  + D ++ R+  W  
Sbjct: 653  FFGTSTSKRTKKRIGNTLGIPYKDGFGKYLGLQADFGHSKKAVFAEIRDKIEARLAGWSE 712

Query: 412  MFLSTAGREVLIKAVLESLPVYVMSVFKLPIGICKEICRCFANFWWGDNVEKKHKLHWKS 591
             FLS AG+EV+IKAV  +LP Y MS FKLPIG+C+++ +   ++WW  N +K+   HW S
Sbjct: 713  QFLSQAGKEVMIKAVAMALPNYAMSCFKLPIGVCRDVEKAVRSYWWRGNTQKRG-CHWTS 771

Query: 592  WTKLALDKEEGGLGFHDIQLFNEALMVKQLWRVLSQPALLVSKVIKARYFPKGNFFDVEP 771
            W +L   K  GG+GF DIQ FN A + K  WR++  P  L++ V+K +Y+P   F D   
Sbjct: 772  WDRLMKQKSAGGMGFKDIQCFNLAFLAKIGWRLIQNPTSLLATVLKDKYYPGKCFKDAGK 831

Query: 772  TQSASWMWNCWIKLKDILRMGLRYKVGNGKSIRIWDSPWLPEAMNF--KPTRTNQR*GDP 945
             ++ SW W    +   +L+ G+R++VG+G+SI I   PWLP    F  KP  + +     
Sbjct: 832  GRNTSWGWKGIFEGHMVLQHGVRWRVGDGESINIQKDPWLPTPTTFLAKPLDSLEE---- 887

Query: 946  VWVSELLEDGGSSWNSSLVFSLFDKADAEKILKIRGMQEGKKDVLWWHLENLGSYSVKSA 1125
              V +L++    SW   ++ + F++ +A KIL I   + G  D L WH    G YSVK+ 
Sbjct: 888  TKVRDLIDPISKSWKEEVILAGFNRDEARKILSIPLSKSGCIDRLVWHYTVNGDYSVKTG 947

Query: 1126 YSKLL 1140
            Y  ++
Sbjct: 948  YGVVM 952



 Score = 78.6 bits (192), Expect(3) = 6e-80
 Identities = 47/137 (34%), Positives = 65/137 (47%), Gaps = 1/137 (0%)
 Frame = +2

Query: 1211 KRSWKLNVKGKIKHFIWKCFSDILPSNCNLRKKWMAVDTICQICGEADETTEHIFFECRR 1390
            KR WKL    KIK FIWKC +  L    NL+++ + V+ IC +C   DE+  H+FF+C  
Sbjct: 979  KRIWKLQAPNKIKFFIWKCCNKALAVRHNLQRRQIRVENICGVCNTFDESENHLFFQCEF 1038

Query: 1391 AKIIWKLSPVSWEGVCDEVHSFPIWWGKVCGVGKDACS*NR-LHLTTYILWWLWKTRNLW 1567
            +   W  SP+           F   W K+C   K+       L    + LW LWK RN  
Sbjct: 1039 SHRFWFGSPLHINSHELAGVDFLESWDKICTSTKNMEKAEEILQEVAFGLWRLWKNRNDV 1098

Query: 1568 IFQKVLKPEKLTVDCAW 1618
            +F  V + + L V   W
Sbjct: 1099 VFNGVHR-QHLEVMMLW 1114



 Score = 59.7 bits (143), Expect(3) = 6e-80
 Identities = 32/78 (41%), Positives = 47/78 (60%)
 Frame = +2

Query: 2   LIISEVFSSLIKAAVXXXXXXXXRICKKGPMITHLLFADDSLVFCEASEDQAKALLYIFH 181
           LI +E FSSLI+  +        +    G  +THL FADDS++F  A+ ++A+ +  I +
Sbjct: 576 LICTEGFSSLIRKGMERGILHGYKFTTNGIPLTHLFFADDSVLFGNATVEEAQGVADILN 635

Query: 182 IYKLFSGQKVNLEKSSIF 235
            Y   SGQ++NL KSSIF
Sbjct: 636 TYASGSGQEINLSKSSIF 653


>ref|XP_008351830.1| PREDICTED: putative ribonuclease H protein At1g65750 [Malus
            domestica]
          Length = 1106

 Score =  234 bits (598), Expect(2) = 7e-80
 Identities = 125/299 (41%), Positives = 167/299 (55%)
 Frame = +1

Query: 232  FFSRNTPNSVQDNICGMFRGIAKHHSSKYLGLPLGIGKSKKEVFRYVVDAVQGRICSWKN 411
            FFS  TPN  + +I G      K    KYLGL    G SKK VF  V D V+ R+  W  
Sbjct: 445  FFSPKTPNRTKRDIEGTLGIQCKQGFGKYLGLQADFGHSKKAVFAEVRDKVEARLAGWTE 504

Query: 412  MFLSTAGREVLIKAVLESLPVYVMSVFKLPIGICKEICRCFANFWWGDNVEKKHKLHWKS 591
             FLS AG+EVLIK+V  +LP Y MS FKLPIG+C++I +    FWW  N +++H +HW S
Sbjct: 505  QFLSQAGKEVLIKSVAMALPNYAMSCFKLPIGVCRDIEKAIRKFWWKGN-DQRHGIHWVS 563

Query: 592  WTKLALDKEEGGLGFHDIQLFNEALMVKQLWRVLSQPALLVSKVIKARYFPKGNFFDVEP 771
            W +++  K  GGLGF DIQ FN AL+ K  WR+   P  L++ V+K +Y P   F +   
Sbjct: 564  WDRISKRKMSGGLGFKDIQCFNLALLAKIGWRLTCYPTSLLATVLKDKYHPGCTFKEAGR 623

Query: 772  TQSASWMWNCWIKLKDILRMGLRYKVGNGKSIRIWDSPWLPEAMNFKPTRTNQR*GDPVW 951
             +  SW W    + + +L  G+R++VGNG+ I I D PW P+   F+         D   
Sbjct: 624  GKLTSWGWKGIYEARKVLLQGIRWRVGNGQRINIRDDPWFPKPSTFRVCPYENL--DATM 681

Query: 952  VSELLEDGGSSWNSSLVFSLFDKADAEKILKIRGMQEGKKDVLWWHLENLGSYSVKSAY 1128
            V EL+E   +SW  + +F+ F + DAE IL I     G +D L WH    G YSVKS Y
Sbjct: 682  VCELIEPASNSWKDNRIFAGFHREDAETILSIPLSHFGCEDKLMWHYSVNGVYSVKSGY 740



 Score = 93.6 bits (231), Expect(2) = 7e-80
 Identities = 49/150 (32%), Positives = 74/150 (49%), Gaps = 1/150 (0%)
 Frame = +2

Query: 1214 RSWKLNVKGKIKHFIWKCFSDILPSNCNLRKKWMAVDTICQICGEADETTEHIFFECRRA 1393
            R W+L V  KIK FIW+C ++ L    N++K+ M VD +C +C   DET  H+FF CR +
Sbjct: 772  RIWRLQVPNKIKFFIWRCCNNALAVRRNIQKRHMRVDNVCGVCNAVDETENHLFFRCRFS 831

Query: 1394 KIIWKLSPVSWEGVCDEVHSFPIWWGKV-CGVGKDACS*NRLHLTTYILWWLWKTRNLWI 1570
             I W  SP+       E + F   WGK   G+     +        + LW +WK RN  +
Sbjct: 832  HIFWFSSPLHLNSHVLEGYDFLDSWGKFQAGMKGKENAEEICQEFAFGLWRIWKNRNDAV 891

Query: 1571 FQKVLKPEKLTVDCAWAEWNEFQASKIMVG 1660
            F+ + +     +D  W    EF+ +   +G
Sbjct: 892  FKGLYRQPNEVMDLWWKNIIEFREASTCLG 921


>gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japonica Group]
          Length = 1594

 Score =  214 bits (546), Expect(3) = 1e-79
 Identities = 111/298 (37%), Positives = 171/298 (57%)
 Frame = +1

Query: 235  FSRNTPNSVQDNICGMFRGIAKHHSSKYLGLPLGIGKSKKEVFRYVVDAVQGRICSWKNM 414
            FS NT +  +  +        +  + KYLGLP+ +G+S+ ++F Y+ + +  RI  WK  
Sbjct: 952  FSPNTSSLEKGAVMAALNMQRETTNEKYLGLPVFVGRSRTKIFSYLKERIWQRIQGWKEK 1011

Query: 415  FLSTAGREVLIKAVLESLPVYVMSVFKLPIGICKEICRCFANFWWGDNVEKKHKLHWKSW 594
             LS AG+E+LIKAV +++P + M  F+L   +C +I +  A +WW  N EK +K+HW SW
Sbjct: 1012 LLSRAGKEILIKAVAQAIPTFAMGCFELTKDLCDQISKMIAKYWWS-NQEKDNKMHWLSW 1070

Query: 595  TKLALDKEEGGLGFHDIQLFNEALMVKQLWRVLSQPALLVSKVIKARYFPKGNFFDVEPT 774
             KL L K  GGLGF DI +FN A++ KQ WR++  P  L S+V++A+YFP G+ F  + T
Sbjct: 1071 NKLTLPKNMGGLGFRDIYIFNLAMLAKQGWRLIQDPDSLCSRVLRAKYFPLGDCFRPKQT 1130

Query: 775  QSASWMWNCWIKLKDILRMGLRYKVGNGKSIRIWDSPWLPEAMNFKPTRTNQR*GDPVWV 954
             + S+ W    K   +L+ G+ +++G+G  I IW  PW+P   + KP  T +       V
Sbjct: 1131 SNVSYTWRSIQKGLRVLQNGMIWRMGDGSKINIWADPWIPRGWSRKP-MTPRGANLVTKV 1189

Query: 955  SELLEDGGSSWNSSLVFSLFDKADAEKILKIRGMQEGKKDVLWWHLENLGSYSVKSAY 1128
             EL++    +W+  L+   F + D   I  I    E  +DVL WH +  G ++VKSAY
Sbjct: 1190 EELIDPYTGTWDEDLLSQTFWEEDVAAIKSIPVHVE-MEDVLAWHFDARGCFTVKSAY 1246



 Score = 70.9 bits (172), Expect(3) = 1e-79
 Identities = 29/66 (43%), Positives = 42/66 (63%)
 Frame = +2

Query: 1211 KRSWKLNVKGKIKHFIWKCFSDILPSNCNLRKKWMAVDTICQICGEADETTEHIFFECRR 1390
            K+ WKL V GKIKHF+W+   + L    NL+ + M VDT C +CG  +E   H+FF+C+ 
Sbjct: 1276 KKLWKLGVPGKIKHFLWRMCHNTLALRANLQHRGMDVDTRCVMCGRYNEDAGHLFFKCKP 1335

Query: 1391 AKIIWK 1408
             K +W+
Sbjct: 1336 VKKVWQ 1341



 Score = 63.5 bits (153), Expect(3) = 1e-79
 Identities = 31/77 (40%), Positives = 47/77 (61%)
 Frame = +2

Query: 2    LIISEVFSSLIKAAVXXXXXXXXRICKKGPMITHLLFADDSLVFCEASEDQAKALLYIFH 181
            L+ +E FS+L+            RIC+  P ++HLLFADDSL+ C A+  +A+ L  I  
Sbjct: 874  LLCAEGFSALLSKTEEEGRLHGIRICQGAPSVSHLLFADDSLILCRANGGEAQQLQTILQ 933

Query: 182  IYKLFSGQKVNLEKSSI 232
            IY+  SGQ +N +KS++
Sbjct: 934  IYEECSGQVINKDKSAV 950


>gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza sativa Japonica Group]
          Length = 1509

 Score =  214 bits (546), Expect(3) = 1e-79
 Identities = 112/298 (37%), Positives = 170/298 (57%)
 Frame = +1

Query: 235  FSRNTPNSVQDNICGMFRGIAKHHSSKYLGLPLGIGKSKKEVFRYVVDAVQGRICSWKNM 414
            FS NT +  +  +        +  + KYLGLP+ +G+S+ ++F Y+ + +  RI  WK  
Sbjct: 924  FSPNTSSLEKGAVMAALNMQRETTNEKYLGLPVFVGRSRTKIFSYLKERIWQRIQGWKEK 983

Query: 415  FLSTAGREVLIKAVLESLPVYVMSVFKLPIGICKEICRCFANFWWGDNVEKKHKLHWKSW 594
             LS AG+E+LIKAV + +P + M  F+L   +C +I +  A +WW  N EK +K+HW SW
Sbjct: 984  LLSRAGKEILIKAVAQVIPTFAMGCFELTKDLCDQISKMIAKYWWS-NQEKDNKMHWLSW 1042

Query: 595  TKLALDKEEGGLGFHDIQLFNEALMVKQLWRVLSQPALLVSKVIKARYFPKGNFFDVEPT 774
             KL L K  GGLGF DI +FN A++ KQ WR++  P  L S+V++A+YFP G+ F  + T
Sbjct: 1043 NKLTLPKNMGGLGFRDIYIFNLAMLAKQGWRLIQDPDSLCSRVLRAKYFPLGDCFRPKQT 1102

Query: 775  QSASWMWNCWIKLKDILRMGLRYKVGNGKSIRIWDSPWLPEAMNFKPTRTNQR*GDPVWV 954
             + S+ W    K   +L+ G+ ++VG+G  I IW  PW+P   + KP  T +       V
Sbjct: 1103 SNVSYTWRSIQKGLRVLQNGMIWRVGDGSKINIWADPWIPRGWSRKP-MTPRGANLVTKV 1161

Query: 955  SELLEDGGSSWNSSLVFSLFDKADAEKILKIRGMQEGKKDVLWWHLENLGSYSVKSAY 1128
             EL++    +W+  L+   F + D   I  I    E  +DVL WH +  G ++VKSAY
Sbjct: 1162 EELIDPYTGTWDEDLLSQTFWEEDVAAIKSIPVHVE-MEDVLAWHFDARGCFTVKSAY 1218



 Score = 70.5 bits (171), Expect(3) = 1e-79
 Identities = 29/66 (43%), Positives = 41/66 (62%)
 Frame = +2

Query: 1211 KRSWKLNVKGKIKHFIWKCFSDILPSNCNLRKKWMAVDTICQICGEADETTEHIFFECRR 1390
            K+ WKL V GKIKHF+W+   + L    NL  + M VDT C +CG  +E   H+FF+C+ 
Sbjct: 1248 KKLWKLGVPGKIKHFLWRMCHNTLALRANLHHRGMDVDTRCVMCGRYNEDAGHLFFKCKP 1307

Query: 1391 AKIIWK 1408
             K +W+
Sbjct: 1308 VKKVWQ 1313



 Score = 63.5 bits (153), Expect(3) = 1e-79
 Identities = 31/77 (40%), Positives = 47/77 (61%)
 Frame = +2

Query: 2    LIISEVFSSLIKAAVXXXXXXXXRICKKGPMITHLLFADDSLVFCEASEDQAKALLYIFH 181
            L+ +E FS+L+            RIC+  P ++HLLFADDSL+ C A+  +A+ L  I  
Sbjct: 846  LLCAEGFSALLSKTEEEGRLHGIRICQGAPSVSHLLFADDSLILCRANGGEAQQLQTILQ 905

Query: 182  IYKLFSGQKVNLEKSSI 232
            IY+  SGQ +N +KS++
Sbjct: 906  IYEECSGQVINKDKSAV 922


>gb|AAP53315.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1505

 Score =  214 bits (546), Expect(3) = 1e-79
 Identities = 112/298 (37%), Positives = 170/298 (57%)
 Frame = +1

Query: 235  FSRNTPNSVQDNICGMFRGIAKHHSSKYLGLPLGIGKSKKEVFRYVVDAVQGRICSWKNM 414
            FS NT +  +  +        +  + KYLGLP+ +G+S+ ++F Y+ + +  RI  WK  
Sbjct: 920  FSPNTSSLEKGAVMAALNMQRETTNEKYLGLPVFVGRSRTKIFSYLKERIWQRIQGWKEK 979

Query: 415  FLSTAGREVLIKAVLESLPVYVMSVFKLPIGICKEICRCFANFWWGDNVEKKHKLHWKSW 594
             LS AG+E+LIKAV + +P + M  F+L   +C +I +  A +WW  N EK +K+HW SW
Sbjct: 980  LLSRAGKEILIKAVAQVIPTFAMGCFELTKDLCDQISKMIAKYWWS-NQEKDNKMHWLSW 1038

Query: 595  TKLALDKEEGGLGFHDIQLFNEALMVKQLWRVLSQPALLVSKVIKARYFPKGNFFDVEPT 774
             KL L K  GGLGF DI +FN A++ KQ WR++  P  L S+V++A+YFP G+ F  + T
Sbjct: 1039 NKLTLPKNMGGLGFRDIYIFNLAMLAKQGWRLIQDPDSLCSRVLRAKYFPLGDCFRPKQT 1098

Query: 775  QSASWMWNCWIKLKDILRMGLRYKVGNGKSIRIWDSPWLPEAMNFKPTRTNQR*GDPVWV 954
             + S+ W    K   +L+ G+ ++VG+G  I IW  PW+P   + KP  T +       V
Sbjct: 1099 SNVSYTWRSIQKGLRVLQNGMIWRVGDGSKINIWADPWIPRGWSRKP-MTPRGANLVTKV 1157

Query: 955  SELLEDGGSSWNSSLVFSLFDKADAEKILKIRGMQEGKKDVLWWHLENLGSYSVKSAY 1128
             EL++    +W+  L+   F + D   I  I    E  +DVL WH +  G ++VKSAY
Sbjct: 1158 EELIDPYTGTWDEDLLSQTFWEEDVAAIKSIPVHVE-MEDVLAWHFDARGCFTVKSAY 1214



 Score = 70.5 bits (171), Expect(3) = 1e-79
 Identities = 29/66 (43%), Positives = 41/66 (62%)
 Frame = +2

Query: 1211 KRSWKLNVKGKIKHFIWKCFSDILPSNCNLRKKWMAVDTICQICGEADETTEHIFFECRR 1390
            K+ WKL V GKIKHF+W+   + L    NL  + M VDT C +CG  +E   H+FF+C+ 
Sbjct: 1244 KKLWKLGVPGKIKHFLWRMCHNTLALRANLHHRGMDVDTRCVMCGRYNEDAGHLFFKCKP 1303

Query: 1391 AKIIWK 1408
             K +W+
Sbjct: 1304 VKKVWQ 1309



 Score = 63.5 bits (153), Expect(3) = 1e-79
 Identities = 31/77 (40%), Positives = 47/77 (61%)
 Frame = +2

Query: 2    LIISEVFSSLIKAAVXXXXXXXXRICKKGPMITHLLFADDSLVFCEASEDQAKALLYIFH 181
            L+ +E FS+L+            RIC+  P ++HLLFADDSL+ C A+  +A+ L  I  
Sbjct: 842  LLCAEGFSALLSKTEEEGRLHGIRICQGAPSVSHLLFADDSLILCRANGGEAQQLQTILQ 901

Query: 182  IYKLFSGQKVNLEKSSI 232
            IY+  SGQ +N +KS++
Sbjct: 902  IYEECSGQVINKDKSAV 918


>gb|ABA98491.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1621

 Score =  214 bits (545), Expect(3) = 2e-79
 Identities = 111/298 (37%), Positives = 171/298 (57%)
 Frame = +1

Query: 235  FSRNTPNSVQDNICGMFRGIAKHHSSKYLGLPLGIGKSKKEVFRYVVDAVQGRICSWKNM 414
            FS NT +  +  +        +  + +YLGLP+ +G+S+ ++F Y+ + +  RI  WK  
Sbjct: 979  FSPNTSSLEKRAVMAALNMQRETTNERYLGLPVFVGRSRTKIFSYLKERIWQRIQGWKEK 1038

Query: 415  FLSTAGREVLIKAVLESLPVYVMSVFKLPIGICKEICRCFANFWWGDNVEKKHKLHWKSW 594
             LS AG+E+LIKAV +++P + M  F+L   +C +I +  A +WW  N EK +K+HW SW
Sbjct: 1039 LLSRAGKEILIKAVAQAIPTFAMGCFELTKDLCDQISKMIAKYWWS-NQEKDNKMHWLSW 1097

Query: 595  TKLALDKEEGGLGFHDIQLFNEALMVKQLWRVLSQPALLVSKVIKARYFPKGNFFDVEPT 774
             KL L K  GGLGF DI +FN A++ KQ WR++  P  L S+V++A+YFP G+ F  + T
Sbjct: 1098 NKLTLPKNMGGLGFRDIYIFNLAMLAKQGWRLIQDPDSLCSRVLRAKYFPLGDCFRPKQT 1157

Query: 775  QSASWMWNCWIKLKDILRMGLRYKVGNGKSIRIWDSPWLPEAMNFKPTRTNQR*GDPVWV 954
             + S+ W    K   +L+ G+ ++VG+G  I IW  PW+P   + KP  T +       V
Sbjct: 1158 SNVSYTWRSIQKGLRVLQNGMIWRVGDGSKINIWADPWIPRGWSRKP-MTPRGANLVTKV 1216

Query: 955  SELLEDGGSSWNSSLVFSLFDKADAEKILKIRGMQEGKKDVLWWHLENLGSYSVKSAY 1128
             EL++    +W+  L+   F + D   I  I    E  +DVL WH +  G ++VKSAY
Sbjct: 1217 EELIDPYTGTWDEDLLSQTFWEEDVAAIKSIPVHVE-MEDVLAWHFDARGCFTVKSAY 1273



 Score = 70.5 bits (171), Expect(3) = 2e-79
 Identities = 29/66 (43%), Positives = 41/66 (62%)
 Frame = +2

Query: 1211 KRSWKLNVKGKIKHFIWKCFSDILPSNCNLRKKWMAVDTICQICGEADETTEHIFFECRR 1390
            K+ WKL V GKIKHF+W+   + L    NL  + M VDT C +CG  +E   H+FF+C+ 
Sbjct: 1303 KKLWKLGVPGKIKHFLWRMCHNTLALRANLHHRGMDVDTRCVMCGRYNEDAGHLFFKCKP 1362

Query: 1391 AKIIWK 1408
             K +W+
Sbjct: 1363 VKKVWQ 1368



 Score = 63.5 bits (153), Expect(3) = 2e-79
 Identities = 31/77 (40%), Positives = 47/77 (61%)
 Frame = +2

Query: 2    LIISEVFSSLIKAAVXXXXXXXXRICKKGPMITHLLFADDSLVFCEASEDQAKALLYIFH 181
            L+ +E FS+L+            RIC+  P ++HLLFADDSL+ C A+  +A+ L  I  
Sbjct: 901  LLCAEGFSALLSKTEEEGRLHGIRICQGAPSVSHLLFADDSLILCRANGGEAQQLQTILQ 960

Query: 182  IYKLFSGQKVNLEKSSI 232
            IY+  SGQ +N +KS++
Sbjct: 961  IYEECSGQVINKDKSAV 977