BLASTX nr result

ID: Rehmannia28_contig00011028 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00011028
         (500 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011077088.1| PREDICTED: protein LUTEIN DEFICIENT 5, chlor...    77   2e-13
ref|XP_012834658.1| PREDICTED: protein LUTEIN DEFICIENT 5, chlor...    71   2e-11
emb|CDP04239.1| unnamed protein product [Coffea canephora]             61   5e-08
ref|XP_012088785.1| PREDICTED: protein LUTEIN DEFICIENT 5, chlor...    55   4e-06

>ref|XP_011077088.1| PREDICTED: protein LUTEIN DEFICIENT 5, chloroplastic [Sesamum
           indicum]
          Length = 617

 Score = 77.0 bits (188), Expect = 2e-13
 Identities = 36/46 (78%), Positives = 42/46 (91%)
 Frame = +1

Query: 1   KMTVTPRRRQPIIPTLDIPTVKVDSSVNVPEVETISGQKDEVSPAL 138
           KMTVTPRRR PIIP L+IPTVK DSS+++PEV+T+SGQKDEVS AL
Sbjct: 571 KMTVTPRRRPPIIPNLEIPTVKADSSLSIPEVKTVSGQKDEVSSAL 616



 Score = 76.6 bits (187), Expect = 2e-13
 Identities = 37/47 (78%), Positives = 41/47 (87%)
 Frame = -1

Query: 500 KMTVTPRRRQPIIPTLDIPTVKVDSYVNIPEVETVSGQKDEVSPVLP 360
           KMTVTPRRR PIIP L+IPTVK DS ++IPEV+TVSGQKDEVS  LP
Sbjct: 571 KMTVTPRRRPPIIPNLEIPTVKADSSLSIPEVKTVSGQKDEVSSALP 617


>ref|XP_012834658.1| PREDICTED: protein LUTEIN DEFICIENT 5, chloroplastic [Erythranthe
           guttata] gi|604335619|gb|EYU39507.1| hypothetical
           protein MIMGU_mgv1a003045mg [Erythranthe guttata]
          Length = 612

 Score = 71.2 bits (173), Expect = 2e-11
 Identities = 34/47 (72%), Positives = 38/47 (80%)
 Frame = +1

Query: 1   KMTVTPRRRQPIIPTLDIPTVKVDSSVNVPEVETISGQKDEVSPALS 141
           KMTVTPRRR PIIP LDIPTV VDSS+N PE  T+  QKD+VSP +S
Sbjct: 566 KMTVTPRRRAPIIPNLDIPTVNVDSSLNFPEATTVPIQKDQVSPVVS 612



 Score = 69.7 bits (169), Expect = 5e-11
 Identities = 34/46 (73%), Positives = 37/46 (80%)
 Frame = -1

Query: 500 KMTVTPRRRQPIIPTLDIPTVKVDSYVNIPEVETVSGQKDEVSPVL 363
           KMTVTPRRR PIIP LDIPTV VDS +N PE  TV  QKD+VSPV+
Sbjct: 566 KMTVTPRRRAPIIPNLDIPTVNVDSSLNFPEATTVPIQKDQVSPVV 611


>emb|CDP04239.1| unnamed protein product [Coffea canephora]
          Length = 639

 Score = 61.2 bits (147), Expect = 5e-08
 Identities = 29/47 (61%), Positives = 36/47 (76%)
 Frame = +1

Query: 1   KMTVTPRRRQPIIPTLDIPTVKVDSSVNVPEVETISGQKDEVSPALS 141
           KMTVT R R PI+PTL+IP V+ DSSVNV ++ T   QK EVSP++S
Sbjct: 593 KMTVTRRMRPPIVPTLEIPAVRSDSSVNVSDISTAPDQKSEVSPSVS 639



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 26/44 (59%), Positives = 32/44 (72%)
 Frame = -1

Query: 500 KMTVTPRRRQPIIPTLDIPTVKVDSYVNIPEVETVSGQKDEVSP 369
           KMTVT R R PI+PTL+IP V+ DS VN+ ++ T   QK EVSP
Sbjct: 593 KMTVTRRMRPPIVPTLEIPAVRSDSSVNVSDISTAPDQKSEVSP 636


>ref|XP_012088785.1| PREDICTED: protein LUTEIN DEFICIENT 5, chloroplastic isoform X2
           [Jatropha curcas]
          Length = 629

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 29/47 (61%), Positives = 33/47 (70%)
 Frame = +1

Query: 1   KMTVTPRRRQPIIPTLDIPTVKVDSSVNVPEVETISGQKDEVSPALS 141
           KMT+T R + PIIP LD+P VKVD+ VNV   E   GQK EVSPA S
Sbjct: 583 KMTITRRTKPPIIPNLDMPAVKVDAPVNVSGGEPQVGQKGEVSPAHS 629


Top