BLASTX nr result
ID: Rehmannia28_contig00010768
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia28_contig00010768
(535 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|KYP30912.1| Retrovirus-related Pol polyprotein from transposo... 152 9e-40
emb|CAN63777.1| hypothetical protein VITISV_043745 [Vitis vinifera] 152 1e-39
emb|CAN76317.1| hypothetical protein VITISV_012360 [Vitis vinifera] 151 2e-39
gb|KYP36435.1| Retrovirus-related Pol polyprotein from transposo... 141 9e-36
gb|KYP35263.1| Retrovirus-related Pol polyprotein from transposo... 137 5e-35
gb|KYP53827.1| Retrovirus-related Pol polyprotein from transposo... 138 8e-35
gb|KYP33441.1| Retrovirus-related Pol polyprotein from transposo... 137 2e-34
gb|KYP78729.1| Retrovirus-related Pol polyprotein from transposo... 136 4e-34
gb|KYP32982.1| Retrovirus-related Pol polyprotein from transposo... 136 6e-34
gb|ABD32582.1| Integrase, catalytic region; Zinc finger, CCHC-ty... 136 6e-34
gb|KYP32507.1| Retrovirus-related Pol polyprotein from transposo... 134 1e-33
gb|KYP38726.1| Retrovirus-related Pol polyprotein from transposo... 135 1e-33
gb|KYP33249.1| Retrovirus-related Pol polyprotein from transposo... 135 1e-33
gb|ABE88110.1| Reverse transcriptase (RNA-dependent DNA polymera... 134 3e-33
gb|KYP70668.1| Retrovirus-related Pol polyprotein from transposo... 132 3e-33
gb|KYP46031.1| Retrovirus-related Pol polyprotein from transposo... 134 3e-33
gb|KYP50151.1| Retrovirus-related Pol polyprotein from transposo... 133 5e-33
gb|KYP47407.1| Retrovirus-related Pol polyprotein from transposo... 132 9e-33
gb|KYP32032.1| Copia protein [Cajanus cajan] 130 8e-32
ref|XP_011656225.1| PREDICTED: LOW QUALITY PROTEIN: retrovirus-r... 129 1e-31
>gb|KYP30912.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 766
Score = 152 bits (384), Expect = 9e-40
Identities = 85/184 (46%), Positives = 109/184 (59%), Gaps = 6/184 (3%)
Frame = -2
Query: 534 GIFMGYSTKSKAYRVYNKTSGVVEESIHVKFNEASGVERXXXXXXXXXXXXXXIVQNDAQ 355
G F+GYS SKAYRVYN + VVEESIHVKFN+ +R + +
Sbjct: 174 GFFIGYSETSKAYRVYNSRTLVVEESIHVKFNDKKETDRELSDLEDDFAGMELNTHDSRK 233
Query: 354 NDQPSTSNDQPSTSNVPQEDRGDTSNLPV---ALKFKGDHPKDLIIGDPLDKVMTRRKFA 184
++Q S ++ +P +NV + T +P ++K HPK+ IIG + V TR KF
Sbjct: 234 DEQVSEASSEPLQTNVESQ----TDMIPPHKSEWRYKSHHPKEQIIGSTSEGVKTRSKFR 289
Query: 183 EK---ALISQKEPKNAKEAIEDEDWFLEMQEELNQFERNDVWELVPCPPSQTIIGTKWVF 13
AL+S+ EPK+ EA+ DE W L MQEELNQF R+DVW LVP P +TIIGTKWVF
Sbjct: 290 HLNSLALLSEIEPKSIDEALHDEGWILAMQEELNQFARSDVWTLVPKPHGKTIIGTKWVF 349
Query: 12 RNKL 1
RNKL
Sbjct: 350 RNKL 353
>emb|CAN63777.1| hypothetical protein VITISV_043745 [Vitis vinifera]
Length = 898
Score = 152 bits (384), Expect = 1e-39
Identities = 89/190 (46%), Positives = 115/190 (60%), Gaps = 12/190 (6%)
Frame = -2
Query: 534 GIFMGYSTKSKAYRVYNKTSGVVEESIHVKFNEASGV--ERXXXXXXXXXXXXXXIVQND 361
GIF+GYST SK +RV+NK + VVEESIHV F E++ ER +Q +
Sbjct: 486 GIFLGYSTSSKVFRVFNKRTMVVEESIHVIFYESNNSLQERESFDDDLGLETSMGKLQIE 545
Query: 360 AQNDQPSTSND-----QPSTSNVPQEDRGDTS-NLPVALKFKGDHPKDLIIGDPLDKVMT 199
+ Q + D P T PQ +G++S +LP KF +HP+D IIG+P V T
Sbjct: 546 DKRQQGKSGEDPKKEESPLTLPPPQPVQGESSQDLPKDWKFVINHPQDQIIGNPXSGVRT 605
Query: 198 RRKFAE----KALISQKEPKNAKEAIEDEDWFLEMQEELNQFERNDVWELVPCPPSQTII 31
R A I Q EPKN K+AI DE+W + MQEELNQFER++VWELVP P +Q++I
Sbjct: 606 RSSLRNICNNLAFIXQIEPKNIKDAIVDENWMIAMQEELNQFERSEVWELVPRPSNQSVI 665
Query: 30 GTKWVFRNKL 1
GTKWVFRNK+
Sbjct: 666 GTKWVFRNKM 675
>emb|CAN76317.1| hypothetical protein VITISV_012360 [Vitis vinifera]
Length = 1409
Score = 151 bits (382), Expect = 2e-39
Identities = 87/190 (45%), Positives = 117/190 (61%), Gaps = 12/190 (6%)
Frame = -2
Query: 534 GIFMGYSTKSKAYRVYNKTSGVVEESIHVKFNEASGV--ERXXXXXXXXXXXXXXIVQND 361
GIF+GYST SKA+RV+NK + VVEESIHV F+E++ ER +Q +
Sbjct: 847 GIFLGYSTSSKAFRVFNKRTMVVEESIHVIFDESNNSLQERESFDDDLGLETSMGKLQIE 906
Query: 360 AQNDQPSTSND-----QPSTSNVPQEDRGDTS-NLPVALKFKGDHPKDLIIGDPLDKVMT 199
+ Q D P PQ+ +G++S +LP KF +HP+D IIG+P V T
Sbjct: 907 DRRQQEEVVEDPKKEESPLALPPPQQVQGESSQDLPKDWKFVINHPQDQIIGNPSSGVRT 966
Query: 198 RRKFAE----KALISQKEPKNAKEAIEDEDWFLEMQEELNQFERNDVWELVPCPPSQTII 31
R A ISQ EPKN K+A+ DE+W + MQEELNQFER++VWEL+P P +Q++I
Sbjct: 967 RSSLRNICNNLAFISQIEPKNIKDALVDENWIIVMQEELNQFERSEVWELMPRPQNQSVI 1026
Query: 30 GTKWVFRNKL 1
GT+WVFRNK+
Sbjct: 1027 GTRWVFRNKM 1036
>gb|KYP36435.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 963
Score = 141 bits (355), Expect = 9e-36
Identities = 79/181 (43%), Positives = 100/181 (55%), Gaps = 4/181 (2%)
Frame = -2
Query: 531 IFMGYSTKSKAYRVYNKTSGVVEESIHVKFNEASGVERXXXXXXXXXXXXXXIVQNDAQN 352
IF+GYST SKAYRVYNK + +VEES+H+ F+E + E + N
Sbjct: 348 IFLGYSTNSKAYRVYNKRTLIVEESVHIVFDETNKQETKQTEIEDLTDLLDQPLLESEPN 407
Query: 351 DQPSTSNDQPSTSNVPQEDRGDTSNLPVALKFKGDHPKDLIIGDPLDKVMTRRKFAE--- 181
++P S +T N ++ LP K D + IIG+ V TRR
Sbjct: 408 EKPKESESNETTENTSEQ-------LPKEWKTSRDLSMENIIGNIGKGVSTRRAIKNICN 460
Query: 180 -KALISQKEPKNAKEAIEDEDWFLEMQEELNQFERNDVWELVPCPPSQTIIGTKWVFRNK 4
A +SQ EPK EA++DE W + MQEELNQFERN+VW+LVP P IIGTKWVFRNK
Sbjct: 461 VMAFVSQVEPKTIDEALQDEHWLMAMQEELNQFERNEVWDLVPLPTDYPIIGTKWVFRNK 520
Query: 3 L 1
L
Sbjct: 521 L 521
>gb|KYP35263.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 570
Score = 137 bits (346), Expect = 5e-35
Identities = 79/181 (43%), Positives = 100/181 (55%), Gaps = 4/181 (2%)
Frame = -2
Query: 531 IFMGYSTKSKAYRVYNKTSGVVEESIHVKFNEASGVERXXXXXXXXXXXXXXIVQNDAQN 352
IF+GYST SKAYR+YNK + VVEES+HV F+E++ E + N
Sbjct: 133 IFLGYSTNSKAYRIYNKRTLVVEESVHVVFDESNKQETRQTEIEDLTDLLDQPLLESETN 192
Query: 351 DQPSTSNDQPSTSNVPQEDRGDTSNLPVALKFKGDHPKDLIIGDPLDKVMTRRKFAE--- 181
++P S +T ++ LP K D D IIG+ V TR
Sbjct: 193 NKPKESESHENTKETSEQ-------LPKEWKTSRDLSIDNIIGNIGKGVSTRSAIKNICN 245
Query: 180 -KALISQKEPKNAKEAIEDEDWFLEMQEELNQFERNDVWELVPCPPSQTIIGTKWVFRNK 4
A +SQ EPK+ EA++DE W + MQEELNQFERN+VW+LVP P IIGTKWVFRNK
Sbjct: 246 TMAFVSQVEPKSIDEALKDEHWLMAMQEELNQFERNEVWDLVPLPKDYPIIGTKWVFRNK 305
Query: 3 L 1
L
Sbjct: 306 L 306
>gb|KYP53827.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 676
Score = 138 bits (347), Expect = 8e-35
Identities = 82/184 (44%), Positives = 103/184 (55%), Gaps = 7/184 (3%)
Frame = -2
Query: 531 IFMGYSTKSKAYRVYNKTSGVVEESIHVKFNEASGVERXXXXXXXXXXXXXXIVQNDAQN 352
IF+GYST SKAYR+YNK + VVEES+HV F+E++ E
Sbjct: 389 IFLGYSTNSKAYRIYNKRTLVVEESVHVVFDESNKQETRKIEIEYLTELL---------- 438
Query: 351 DQP---STSNDQPSTSNVPQEDRGDTSNLPVALKFKGDHPKDLIIGDPLDKVMTRRKFAE 181
DQP + N++P S ++ R + LP K D D IIG+ V TR
Sbjct: 439 DQPLLENEPNEEPKESQSHEKVRETSEQLPKEWKTSRDLSMDNIIGNIGKGVSTRSAIKN 498
Query: 180 ----KALISQKEPKNAKEAIEDEDWFLEMQEELNQFERNDVWELVPCPPSQTIIGTKWVF 13
A +SQ EPK+ EA++DE W + MQEELNQFERN+VW+LVP P IIGTKWVF
Sbjct: 499 ICNTMAFVSQVEPKSIDEALKDEHWLMAMQEELNQFERNEVWDLVPLPKDYPIIGTKWVF 558
Query: 12 RNKL 1
RNKL
Sbjct: 559 RNKL 562
>gb|KYP33441.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1470
Score = 137 bits (346), Expect = 2e-34
Identities = 79/181 (43%), Positives = 100/181 (55%), Gaps = 4/181 (2%)
Frame = -2
Query: 531 IFMGYSTKSKAYRVYNKTSGVVEESIHVKFNEASGVERXXXXXXXXXXXXXXIVQNDAQN 352
IF+GYST SKAYR+YNK + VVEES+HV F+E++ E + N
Sbjct: 933 IFLGYSTNSKAYRIYNKRTLVVEESVHVVFDESNKQETRQTEIEDLTDLLDQPLLESETN 992
Query: 351 DQPSTSNDQPSTSNVPQEDRGDTSNLPVALKFKGDHPKDLIIGDPLDKVMTRRKFAE--- 181
++P S +T ++ LP K D D IIG+ V TR
Sbjct: 993 NKPKESESHENTKETSEQ-------LPKEWKTSRDLSIDNIIGNIGKGVSTRSAIKNICN 1045
Query: 180 -KALISQKEPKNAKEAIEDEDWFLEMQEELNQFERNDVWELVPCPPSQTIIGTKWVFRNK 4
A +SQ EPK+ EA++DE W + MQEELNQFERN+VW+LVP P IIGTKWVFRNK
Sbjct: 1046 TMAFVSQVEPKSIDEALKDEHWLMAMQEELNQFERNEVWDLVPLPTDYPIIGTKWVFRNK 1105
Query: 3 L 1
L
Sbjct: 1106 L 1106
>gb|KYP78729.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1564
Score = 136 bits (343), Expect = 4e-34
Identities = 81/182 (44%), Positives = 103/182 (56%), Gaps = 5/182 (2%)
Frame = -2
Query: 531 IFMGYSTKSKAYRVYNKTSGVVEESIHVKFNEASGVE-RXXXXXXXXXXXXXXIVQNDAQ 355
IF+GYST SKAYR+YNK + VVEES+HV F+E++ E R +++N+
Sbjct: 933 IFLGYSTNSKAYRIYNKRTLVVEESVHVVFDESNKQETRQTEIEDLNELLDQSLLENEP- 991
Query: 354 NDQPSTSNDQPSTSNVPQEDRGDTSNLPVALKFKGDHPKDLIIGDPLDKVMTRRKFAE-- 181
N+ P S ++ + LP K D D IIG+ V TR
Sbjct: 992 -------NEVPKESESLEKAKETCEQLPKEWKTSRDLSMDNIIGNIGKGVSTRSAIKNIC 1044
Query: 180 --KALISQKEPKNAKEAIEDEDWFLEMQEELNQFERNDVWELVPCPPSQTIIGTKWVFRN 7
A +SQ EPKN EA++DE W + MQEELNQFERN+VW+LVP P IIGTKWVFRN
Sbjct: 1045 NTMAFVSQVEPKNIDEALKDEHWLMAMQEELNQFERNEVWDLVPLPKDYPIIGTKWVFRN 1104
Query: 6 KL 1
KL
Sbjct: 1105 KL 1106
>gb|KYP32982.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1533
Score = 136 bits (342), Expect = 6e-34
Identities = 82/181 (45%), Positives = 102/181 (56%), Gaps = 4/181 (2%)
Frame = -2
Query: 531 IFMGYSTKSKAYRVYNKTSGVVEESIHVKFNEASGVERXXXXXXXXXXXXXXIVQNDAQN 352
IF+GYST SKAYR+YNK + VVEES+HV F+E++ E + + N
Sbjct: 902 IFLGYSTNSKAYRIYNKRTLVVEESVHVVFDESNKQETRQTEVEDLTELLDQSLLENEPN 961
Query: 351 DQPSTSNDQPSTSNVPQEDRGDTSNLPVALKFKGDHPKDLIIGDPLDKVMTRRKFAE--- 181
D + S S+V Q++ + LP K D D IIG V TR
Sbjct: 962 DV-----SKESESHVKQKETCE--QLPKEWKTTRDLSMDNIIGSIGKGVSTRSAIKNICN 1014
Query: 180 -KALISQKEPKNAKEAIEDEDWFLEMQEELNQFERNDVWELVPCPPSQTIIGTKWVFRNK 4
A +SQ EPKN EA++DE W + MQEELNQFERN+VW+LVP P IIGTKWVFRNK
Sbjct: 1015 TMAFVSQVEPKNIDEALKDEHWLMAMQEELNQFERNEVWDLVPLPKDYPIIGTKWVFRNK 1074
Query: 3 L 1
L
Sbjct: 1075 L 1075
>gb|ABD32582.1| Integrase, catalytic region; Zinc finger, CCHC-type; Peptidase
aspartic, catalytic [Medicago truncatula]
Length = 1715
Score = 136 bits (342), Expect = 6e-34
Identities = 82/209 (39%), Positives = 109/209 (52%), Gaps = 31/209 (14%)
Frame = -2
Query: 534 GIFMGYSTKSKAYRVYNKTSGVVEESIHVKFNEASGVERXXXXXXXXXXXXXXIVQNDAQ 355
GIF+GYS +SKAYRVYN + VEES+HVKF++ + ++ ++
Sbjct: 1053 GIFLGYSERSKAYRVYNSETQCVEESMHVKFDDREPGSKTSEQSESNAGTTDS--EDASE 1110
Query: 354 NDQPSTSNDQPSTSNVPQ-------------------------EDRGDTSNLPVALKFK- 253
+DQPS S + P+ ED D + + KFK
Sbjct: 1111 SDQPSDSEKYTEVESCPEAEITPEAESNSEAEPSPKVQNESASEDFQDNTQQVIQPKFKH 1170
Query: 252 -GDHPKDLIIGDPLDKVMTRRKFAEK----ALISQKEPKNAKEAIEDEDWFLEMQEELNQ 88
HP++LIIG TR F ++ L+S EPK +EA+ D+ W L MQEELNQ
Sbjct: 1171 KSSHPEELIIGSKDSPRRTRSHFRQEESLIGLLSIIEPKTVEEALSDDGWILAMQEELNQ 1230
Query: 87 FERNDVWELVPCPPSQTIIGTKWVFRNKL 1
F+RNDVW+LVP P + IIGTKWVFRNKL
Sbjct: 1231 FQRNDVWDLVPKPSQKNIIGTKWVFRNKL 1259
>gb|KYP32507.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 588
Score = 134 bits (337), Expect = 1e-33
Identities = 77/181 (42%), Positives = 98/181 (54%), Gaps = 4/181 (2%)
Frame = -2
Query: 531 IFMGYSTKSKAYRVYNKTSGVVEESIHVKFNEASGVERXXXXXXXXXXXXXXIVQNDAQN 352
IF+GYST SKAYR+YNK + VVEES+HV F+E++ E + + QN
Sbjct: 379 IFLGYSTNSKAYRIYNKRTLVVEESVHVVFDESNKQETRQTEIEDLTELLDQPLLENEQN 438
Query: 351 DQPSTSNDQPSTSNVPQEDRGDTSNLPVALKFKGDHPKDLIIGDPLDKVMTRRKFAE--- 181
+P + ++ R + LP K D D IIG+ V TR
Sbjct: 439 KEPKENESH-------EKARETSEQLPKEWKTSRDLSMDNIIGNIGKGVSTRSAIKNICN 491
Query: 180 -KALISQKEPKNAKEAIEDEDWFLEMQEELNQFERNDVWELVPCPPSQTIIGTKWVFRNK 4
A +SQ EPK+ EA+ DE W + MQ+ELNQFERN VW+LVP P IIGTKW FRNK
Sbjct: 492 TMAFVSQVEPKSIDEALNDEHWLMAMQDELNQFERNQVWDLVPLPKGYPIIGTKWAFRNK 551
Query: 3 L 1
L
Sbjct: 552 L 552
>gb|KYP38726.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 749
Score = 135 bits (339), Expect = 1e-33
Identities = 78/181 (43%), Positives = 98/181 (54%), Gaps = 4/181 (2%)
Frame = -2
Query: 531 IFMGYSTKSKAYRVYNKTSGVVEESIHVKFNEASGVERXXXXXXXXXXXXXXIVQNDAQN 352
IF+GYST SKAYR+YNK + VVEES+HV F+E++ E + + N
Sbjct: 118 IFLGYSTNSKAYRIYNKRTLVVEESVHVVFDESNKQETRQTEIEDLNELLDQSLLENEPN 177
Query: 351 DQPSTSNDQPSTSNVPQEDRGDTSNLPVALKFKGDHPKDLIIGDPLDKVMTRRKFAE--- 181
+ P S ++ LP K D D IIG+ V TR
Sbjct: 178 EVPKESESHEKAKETCEQ-------LPKEWKTSRDLSMDNIIGNIGKGVSTRSAIKNICN 230
Query: 180 -KALISQKEPKNAKEAIEDEDWFLEMQEELNQFERNDVWELVPCPPSQTIIGTKWVFRNK 4
A +SQ EPK+ EA++DE W + MQEELNQFERN+VW+LVP P IIGTKWVFRNK
Sbjct: 231 TMAFVSQVEPKSIDEALKDEHWLMAMQEELNQFERNEVWDLVPLPKDYPIIGTKWVFRNK 290
Query: 3 L 1
L
Sbjct: 291 L 291
>gb|KYP33249.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1010
Score = 135 bits (339), Expect = 1e-33
Identities = 82/184 (44%), Positives = 100/184 (54%), Gaps = 7/184 (3%)
Frame = -2
Query: 531 IFMGYSTKSKAYRVYNKTSGVVEESIHVKFNEASGVERXXXXXXXXXXXXXXIVQNDAQN 352
IF+GYST SKAYRVYNK + VVEES+HV F+E + E
Sbjct: 379 IFLGYSTNSKAYRVYNKRTLVVEESVHVVFDETNKQETKKTEIEDLTDFL---------- 428
Query: 351 DQP---STSNDQPSTSNVPQEDRGDTSNLPVALKFKGDHPKDLIIGDPLDKVMTRRKFAE 181
DQP S +++P S + + + LP K D + IIG+ V TRR
Sbjct: 429 DQPPLESEPSEKPKESESIETTKKTSEQLPKEWKTSKDLSIENIIGNIGKGVSTRRSIKN 488
Query: 180 ----KALISQKEPKNAKEAIEDEDWFLEMQEELNQFERNDVWELVPCPPSQTIIGTKWVF 13
A +SQ EPK EA+ DE W + MQEELNQFERN+VW+LVP P IIGTKWVF
Sbjct: 489 ICNTMAFVSQVEPKTIDEALHDEHWLMAMQEELNQFERNEVWDLVPLPSDYPIIGTKWVF 548
Query: 12 RNKL 1
RNKL
Sbjct: 549 RNKL 552
>gb|ABE88110.1| Reverse transcriptase (RNA-dependent DNA polymerase), putative
[Medicago truncatula]
Length = 1654
Score = 134 bits (337), Expect = 3e-33
Identities = 81/208 (38%), Positives = 108/208 (51%), Gaps = 31/208 (14%)
Frame = -2
Query: 534 GIFMGYSTKSKAYRVYNKTSGVVEESIHVKFNEASGVERXXXXXXXXXXXXXXIVQNDAQ 355
GIF+GYS +SKAYRVYN + VEES+HVKF++ + ++ ++
Sbjct: 992 GIFLGYSERSKAYRVYNSETHCVEESMHVKFDDREPGSKTPEQSESNAGTTDS--EDASE 1049
Query: 354 NDQPSTSNDQPSTSNVPQ-------------------------EDRGDTSNLPVALKFK- 253
+DQPS S + P+ ED D + + KFK
Sbjct: 1050 SDQPSNSEKYTEVESYPEAEITPEVESNSEAEPSPIVQNESASEDFQDNTQQVIQPKFKH 1109
Query: 252 -GDHPKDLIIGDPLDKVMTRRKFAEK----ALISQKEPKNAKEAIEDEDWFLEMQEELNQ 88
HP++LIIG TR F ++ L+S EPK +EA+ D+ W L MQEELNQ
Sbjct: 1110 KSSHPEELIIGSKDSPRRTRSHFRQEETLIGLLSIIEPKTVEEALSDDGWILSMQEELNQ 1169
Query: 87 FERNDVWELVPCPPSQTIIGTKWVFRNK 4
F+RNDVW+LVP P + IIGTKWVFRNK
Sbjct: 1170 FQRNDVWDLVPKPFQKNIIGTKWVFRNK 1197
>gb|KYP70668.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 548
Score = 132 bits (333), Expect = 3e-33
Identities = 75/180 (41%), Positives = 98/180 (54%), Gaps = 4/180 (2%)
Frame = -2
Query: 531 IFMGYSTKSKAYRVYNKTSGVVEESIHVKFNEASGVERXXXXXXXXXXXXXXIVQNDAQN 352
IF+GYST SKAYR+YNK + +V+ES+HV F E + E + N
Sbjct: 78 IFLGYSTNSKAYRIYNKRTLIVKESVHVVFGETNKQETKQTEIEDLTDLLDQPLLETEPN 137
Query: 351 DQPSTSNDQPSTSNVPQEDRGDTSNLPVALKFKGDHPKDLIIGDPLDKVMTRRKFAE--- 181
++P S +T + ++ LP K D + IIG+ TRR
Sbjct: 138 EKPKESESNETTEDTSEQ-------LPKESKTSRDLSMENIIGNIGKGGSTRRVIKNICN 190
Query: 180 -KALISQKEPKNAKEAIEDEDWFLEMQEELNQFERNDVWELVPCPPSQTIIGTKWVFRNK 4
A +SQ EPK EA++DE W ++MQEELNQFERN+VW+LVP P IIGTKWVFRNK
Sbjct: 191 TMAFVSQVEPKTIDEALKDEHWLMDMQEELNQFERNEVWDLVPLPNDYPIIGTKWVFRNK 250
>gb|KYP46031.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 772
Score = 134 bits (336), Expect = 3e-33
Identities = 77/181 (42%), Positives = 98/181 (54%), Gaps = 4/181 (2%)
Frame = -2
Query: 531 IFMGYSTKSKAYRVYNKTSGVVEESIHVKFNEASGVERXXXXXXXXXXXXXXIVQNDAQN 352
IF+GYST SKAYR+YNK + VVEES+HV F+E++ E + + N
Sbjct: 379 IFLGYSTNSKAYRIYNKRTLVVEESVHVVFDESNKQETRQTEIEDLTELLDQSLLENEPN 438
Query: 351 DQPSTSNDQPSTSNVPQEDRGDTSNLPVALKFKGDHPKDLIIGDPLDKVMTRRKFAE--- 181
+ P S ++ LP + D D IIG+ V TR
Sbjct: 439 EVPKESESHEKAKETCEQ-------LPKEWRTSRDLSMDNIIGNIGKGVSTRSAIKNICN 491
Query: 180 -KALISQKEPKNAKEAIEDEDWFLEMQEELNQFERNDVWELVPCPPSQTIIGTKWVFRNK 4
A +SQ EPK+ EA++DE W + MQEELNQFERN+VW+LVP P IIGTKWVFRNK
Sbjct: 492 TMAFVSQVEPKSIDEALKDEHWLMAMQEELNQFERNEVWDLVPLPKDYPIIGTKWVFRNK 551
Query: 3 L 1
L
Sbjct: 552 L 552
>gb|KYP50151.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1006
Score = 133 bits (335), Expect = 5e-33
Identities = 81/184 (44%), Positives = 100/184 (54%), Gaps = 7/184 (3%)
Frame = -2
Query: 531 IFMGYSTKSKAYRVYNKTSGVVEESIHVKFNEASGVERXXXXXXXXXXXXXXIVQNDAQN 352
IF+GYST SK+YR+YNK + VVEES+HV F+E++
Sbjct: 379 IFLGYSTNSKSYRIYNKRTLVVEESVHVVFDESNKQTEIEDLTELL-------------- 424
Query: 351 DQP---STSNDQPSTSNVPQEDRGDTSNLPVALKFKGDHPKDLIIGDPLDKVMTRRKFAE 181
DQP S N++ S ++ R LP K D D IIG+ V TR
Sbjct: 425 DQPLLESEPNEKSKESEPHEKARETCVQLPKEWKASRDLSMDNIIGNIGKGVTTRSAIKN 484
Query: 180 ----KALISQKEPKNAKEAIEDEDWFLEMQEELNQFERNDVWELVPCPPSQTIIGTKWVF 13
A +SQ EPKN EA++DE W + MQEELNQFERN+VW+LVP P IIGTKWVF
Sbjct: 485 ICNTMAFVSQVEPKNIDEALKDEHWLMAMQEELNQFERNEVWDLVPLPKDYPIIGTKWVF 544
Query: 12 RNKL 1
RNKL
Sbjct: 545 RNKL 548
>gb|KYP47407.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1569
Score = 132 bits (333), Expect = 9e-33
Identities = 80/184 (43%), Positives = 102/184 (55%), Gaps = 7/184 (3%)
Frame = -2
Query: 531 IFMGYSTKSKAYRVYNKTSGVVEESIHVKFNEASGVERXXXXXXXXXXXXXXIVQNDAQN 352
IF+GYST SK+YR+YNK + VVEES+HV F+E++ E
Sbjct: 938 IFLGYSTNSKSYRIYNKRTLVVEESVHVVFDESNKQETRQTEIEDLNELL---------- 987
Query: 351 DQP---STSNDQPSTSNVPQEDRGDTSNLPVALKFKGDHPKDLIIGDPLDKVMTRRKFAE 181
DQP S N++ S ++++ LP K + D IIG+ V TR
Sbjct: 988 DQPLLESEPNEKSKESVSHEKEKVTCEQLPKEWKTSRELSIDNIIGNIGKGVTTRSAIKN 1047
Query: 180 ----KALISQKEPKNAKEAIEDEDWFLEMQEELNQFERNDVWELVPCPPSQTIIGTKWVF 13
A +SQ EPKN EA++DE W + MQEELNQFERN+VW+LVP P IIGTKWVF
Sbjct: 1048 ICNTMAFVSQVEPKNIDEALKDEHWLMAMQEELNQFERNEVWDLVPLPKDYPIIGTKWVF 1107
Query: 12 RNKL 1
RNKL
Sbjct: 1108 RNKL 1111
>gb|KYP32032.1| Copia protein [Cajanus cajan]
Length = 1027
Score = 130 bits (326), Expect = 8e-32
Identities = 73/175 (41%), Positives = 95/175 (54%), Gaps = 4/175 (2%)
Frame = -2
Query: 513 TKSKAYRVYNKTSGVVEESIHVKFNEASGVERXXXXXXXXXXXXXXIVQNDAQNDQPSTS 334
T SKAYR+YNK + +VEES+HV F+E + E + N++P S
Sbjct: 607 TNSKAYRIYNKRTLIVEESVHVVFDETNKQETKQTEIEYLTDLLDQPLLESEPNEKPKES 666
Query: 333 NDQPSTSNVPQEDRGDTSNLPVALKFKGDHPKDLIIGDPLDKVMTRRKFAE----KALIS 166
+T N ++ LP K D + IIG+ +V TRR A +S
Sbjct: 667 ESNETTENTSEQ-------LPKEWKTSKDLSMENIIGNIGKRVSTRRAIKNICNTMAFVS 719
Query: 165 QKEPKNAKEAIEDEDWFLEMQEELNQFERNDVWELVPCPPSQTIIGTKWVFRNKL 1
Q EPK EA++DE W + MQEELNQFERN+ W+LVP P + IIGTKWVFRNKL
Sbjct: 720 QVEPKTIDEALKDEHWLMAMQEELNQFERNEAWDLVPLPTNYPIIGTKWVFRNKL 774
>ref|XP_011656225.1| PREDICTED: LOW QUALITY PROTEIN: retrovirus-related Pol polyprotein
from transposon TNT 1-94 [Cucumis sativus]
Length = 794
Score = 129 bits (325), Expect = 1e-31
Identities = 76/177 (42%), Positives = 105/177 (59%), Gaps = 4/177 (2%)
Frame = -2
Query: 519 YSTKSKAYRVYNKTSGVVEESIHVKFNEA-SGVERXXXXXXXXXXXXXXIVQNDAQNDQP 343
YS+ SKAYRV+NK + V+EESIHV F+E+ + V ++ ND +
Sbjct: 320 YSSTSKAYRVFNKKTLVIEESIHVVFDESWNNVSNESICSDDLEKDFGDLLVNDKGKEIV 379
Query: 342 STSNDQPSTSNVPQEDRGDTSNLPVALKFKGDHPKDLIIGDPLDKVMTRRK---FAEKAL 172
+ D N+ ++ +S+LP ++ H KDLI+ +P V TR F+ A
Sbjct: 380 PSMQDV----NIIEKKEEGSSSLPKVWRYALSHLKDLILSNPEQGVKTRSSLNLFSNLAF 435
Query: 171 ISQKEPKNAKEAIEDEDWFLEMQEELNQFERNDVWELVPCPPSQTIIGTKWVFRNKL 1
+SQ EP++ K+A DE W L MQEELNQFERN VW+LVP P + +IIGTKWVFRNK+
Sbjct: 436 VSQIEPRSFKDAECDEFWILAMQEELNQFERNKVWKLVPRPSNASIIGTKWVFRNKM 492