BLASTX nr result
ID: Rehmannia28_contig00010694
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia28_contig00010694
(1442 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011099849.1| PREDICTED: cold shock domain-containing prot... 223 1e-66
gb|EPS59299.1| hypothetical protein M569_15509, partial [Genlise... 191 7e-55
ref|XP_012845109.1| PREDICTED: glycine-rich protein 2-like [Eryt... 187 2e-52
gb|EPS64559.1| hypothetical protein M569_10222, partial [Genlise... 154 6e-41
emb|CDP01891.1| unnamed protein product [Coffea canephora] 130 4e-31
ref|XP_009794243.1| PREDICTED: cold shock domain-containing prot... 126 7e-30
ref|XP_009588212.1| PREDICTED: cold shock domain-containing prot... 122 3e-28
ref|XP_015065865.1| PREDICTED: cold shock domain-containing prot... 121 4e-28
ref|XP_006340741.1| PREDICTED: cold shock domain-containing prot... 120 9e-28
ref|XP_004232496.1| PREDICTED: cold shock domain-containing prot... 119 2e-27
ref|XP_010113340.1| Glycine-rich protein 2 [Morus notabilis] gi|... 117 1e-26
gb|KDP46764.1| hypothetical protein JCGZ_06552 [Jatropha curcas] 115 1e-25
ref|XP_012065977.1| PREDICTED: cold shock domain-containing prot... 115 1e-25
ref|XP_004234533.1| PREDICTED: cold shock domain-containing prot... 114 5e-25
ref|XP_008361343.1| PREDICTED: cold shock protein 1-like [Malus ... 113 6e-25
ref|XP_015071070.1| PREDICTED: cold shock domain-containing prot... 113 1e-24
ref|XP_015951886.1| PREDICTED: cold shock domain-containing prot... 111 2e-24
ref|XP_002533802.1| PREDICTED: cold shock domain-containing prot... 104 6e-22
ref|XP_006383095.1| cold-shock DNA-binding family protein [Popul... 103 9e-22
ref|XP_006380594.1| cold-shock DNA-binding family protein [Popul... 101 5e-21
>ref|XP_011099849.1| PREDICTED: cold shock domain-containing protein 3 [Sesamum indicum]
Length = 237
Score = 223 bits (567), Expect = 1e-66
Identities = 125/239 (52%), Positives = 128/239 (53%), Gaps = 2/239 (0%)
Frame = +1
Query: 295 MAEEKLSRSKGVVTKFNDQKGYGFIQPDEGGEDLFVHQTAIKSDGYRTLREGQVVEFTII 474
MAE+K++RSKGVVTKFNDQKGYGFIQPDEGGEDLFVHQTAIKSDGYRTLREGQVVEFTII
Sbjct: 1 MAEDKVTRSKGVVTKFNDQKGYGFIQPDEGGEDLFVHQTAIKSDGYRTLREGQVVEFTII 60
Query: 475 LDGDKTKATDVTAPGGGPVDLTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 654
LDGDKTKA DVTAPGGGPVD T
Sbjct: 61 LDGDKTKAADVTAPGGGPVDSTSRRGNNSNSRGGGYGFGDRRNDGNGYGYRSGGGGGGGG 120
Query: 655 XXXXXXXXXHMARDCXXXXXXXXXXXXXXXXXXXXXXXHMARECPXXXXXXXXXXXCFTC 834
HMARDC HMARECP CFTC
Sbjct: 121 ECFNCGEYGHMARDC---NNGGGGGGNGGGCYNCGGYGHMARECPSGSRGGGGGGACFTC 177
Query: 835 GEPGHMARDCM--XXXXXXXXXXXXXXXXXXXXXXXXXXKCFNCGESGHFARECKEAPR 1005
GEPGHMARDCM KCFNCGESGHFARECKEAPR
Sbjct: 178 GEPGHMARDCMRGGGGGGGGGYSRGGVVVGRFGGGGGGGKCFNCGESGHFARECKEAPR 236
>gb|EPS59299.1| hypothetical protein M569_15509, partial [Genlisea aurea]
Length = 200
Score = 191 bits (484), Expect = 7e-55
Identities = 110/233 (47%), Positives = 119/233 (51%), Gaps = 1/233 (0%)
Frame = +1
Query: 301 EEKLSRSKGVVTKFNDQKGYGFIQPDEGGEDLFVHQTAIKSDGYRTLREGQVVEFTIILD 480
EEKL+RSKGVVTKFNDQKGYGFIQPDEGG+DLFVHQTAIKSDGYRTLREGQ VEFTIILD
Sbjct: 1 EEKLTRSKGVVTKFNDQKGYGFIQPDEGGDDLFVHQTAIKSDGYRTLREGQEVEFTIILD 60
Query: 481 GDKTKATDVTAPGGGPVDLTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 660
GDKTKAT+VTAPGGGPVDL
Sbjct: 61 GDKTKATEVTAPGGGPVDL-------------------------------PSRRGNGGEC 89
Query: 661 XXXXXXXHMARDCXXXXXXXXXXXXXXXXXXXXXXXHMAREC-PXXXXXXXXXXXCFTCG 837
H+ARDC H+AR+C CFTCG
Sbjct: 90 FNCGEYGHIARDCNSGGGGGGGGGGGGGCYNCGGFGHLARDCQSGGGGRGGGSGACFTCG 149
Query: 838 EPGHMARDCMXXXXXXXXXXXXXXXXXXXXXXXXXXKCFNCGESGHFARECKE 996
+PGH+ARDC KC+NCG GHFARECKE
Sbjct: 150 DPGHLARDC--TKGRGGGGYGRGGGGRFLGGNSGGGKCYNCGGFGHFARECKE 200
>ref|XP_012845109.1| PREDICTED: glycine-rich protein 2-like [Erythranthe guttata]
Length = 281
Score = 187 bits (475), Expect = 2e-52
Identities = 113/243 (46%), Positives = 118/243 (48%), Gaps = 11/243 (4%)
Frame = +1
Query: 295 MAEEKLSRSKGVVTKFNDQKGYGFIQPDEGGEDLFVHQTAIKSDGYRTLREGQVVEFTII 474
MAEEK+SRSKGVVT+FNDQKGYGFIQPDEGGEDLFVHQTAIK+DGYRTLREGQVVEFTII
Sbjct: 1 MAEEKVSRSKGVVTRFNDQKGYGFIQPDEGGEDLFVHQTAIKTDGYRTLREGQVVEFTII 60
Query: 475 LDGDKTKATDVTAPGGGPVDLTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 654
LDGDKTKATDVTAPGGGPV+
Sbjct: 61 LDGDKTKATDVTAPGGGPVEAN--------SRRGNNANSRGDGFGFGDRRGGGGGGGGAG 112
Query: 655 XXXXXXXXXHMARDCXXXXXXXXXXXXXXXXXXXXXXXHMARECP-----------XXXX 801
HMARDC HMARECP
Sbjct: 113 ECFNCGEFGHMARDC-GNGGGGGGGGSAGNCYNCGGIGHMARECPSGGRGGGVGGGRGGG 171
Query: 802 XXXXXXXCFTCGEPGHMARDCMXXXXXXXXXXXXXXXXXXXXXXXXXXKCFNCGESGHFA 981
CFTCGEPGHMARDC CF CGE GH A
Sbjct: 172 RSGGGGACFTCGEPGHMARDC---TGNVGGGGSGAGVGGRGVGRGGGGACFTCGEPGHMA 228
Query: 982 REC 990
R+C
Sbjct: 229 RDC 231
>gb|EPS64559.1| hypothetical protein M569_10222, partial [Genlisea aurea]
Length = 184
Score = 154 bits (388), Expect = 6e-41
Identities = 85/187 (45%), Positives = 98/187 (52%), Gaps = 1/187 (0%)
Frame = +1
Query: 310 LSRSKGVVTKFNDQKGYGFIQPDEGGEDLFVHQTAIKSDGYRTLREGQVVEFTIILDGDK 489
+SRSKGVVT+FNDQKGYGFIQPDEGG++LFVHQTAIKSDG+R LREGQ VEFT++LDG+K
Sbjct: 1 MSRSKGVVTRFNDQKGYGFIQPDEGGDELFVHQTAIKSDGFRKLREGQEVEFTVVLDGEK 60
Query: 490 TKATDVTAPGGGPVDLTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 669
TKATDVTAPGGG VD P
Sbjct: 61 TKATDVTAPGGGSVDTLP----------IRGNGGNSRGGGGYGSRGPGGGGTGGGGCFNC 110
Query: 670 XXXXHMARDCXXXXXXXXXXXXXXXXXXXXXXXHMAREC-PXXXXXXXXXXXCFTCGEPG 846
H AR+C HMAR+C C+TCGE G
Sbjct: 111 GEYGHTARECTLGSRGGGGGGGSGGCYNCGEYGHMARDCTSGGSRGGGSSGACYTCGEAG 170
Query: 847 HMARDCM 867
H+ARDC+
Sbjct: 171 HLARDCL 177
>emb|CDP01891.1| unnamed protein product [Coffea canephora]
Length = 265
Score = 130 bits (326), Expect = 4e-31
Identities = 83/237 (35%), Positives = 102/237 (43%), Gaps = 5/237 (2%)
Frame = +1
Query: 295 MAEEKLSRSKGVVTKFNDQKGYGFIQPDEGGEDLFVHQTAIKSDGYRTLREGQVVEFTII 474
MAEE +RS+GVV KF D KG+GFI+PD+ E LFVHQ+ I+SDGYRTLREGQVVEF++I
Sbjct: 1 MAEEN-TRSRGVVVKFRDDKGFGFIKPDDSSEHLFVHQSEIRSDGYRTLREGQVVEFSVI 59
Query: 475 LDGDKTKATDVTAPGGGPVDLT---PXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 645
L+ +KTKA +VT P G PVD +
Sbjct: 60 LEANKTKAVNVTGPNGAPVDTSRGGRGGGGTRGGYGFSDGGYNRRNGNGYGFRGAAGGGG 119
Query: 646 XXXXXXXXXXXXHMARDCXXXXXXXXXXXXXXXXXXXXXXXHMAREC--PXXXXXXXXXX 819
H+ARDC H+AR+C
Sbjct: 120 GGGECYNCGRAGHLARDC---DRMPSSGGGGGECYTCGRIGHLARDCDRSAGNGGSGGGG 176
Query: 820 XCFTCGEPGHMARDCMXXXXXXXXXXXXXXXXXXXXXXXXXXKCFNCGESGHFAREC 990
CF CG+ GH+ARDC CF CGE GH AR+C
Sbjct: 177 GCFKCGDYGHLARDC-------SRSGGGRGGVGSGGGGGGGGSCFRCGEQGHMARDC 226
>ref|XP_009794243.1| PREDICTED: cold shock domain-containing protein 3-like [Nicotiana
sylvestris]
Length = 262
Score = 126 bits (317), Expect = 7e-30
Identities = 79/232 (34%), Positives = 95/232 (40%), Gaps = 6/232 (2%)
Frame = +1
Query: 313 SRSKGVVTKFNDQKGYGFIQPDEGGEDLFVHQTAIKSDGYRTLREGQVVEFTIILDGDKT 492
SR GVV+KFN+QKGYGFI+PD+G EDLFVHQ+ IKSDGYR+L EGQ VEFT+ + GDK
Sbjct: 6 SRMTGVVSKFNNQKGYGFIKPDDGSEDLFVHQSEIKSDGYRSLYEGQKVEFTMTVKGDKY 65
Query: 493 KATDVTAPGGGPVDLTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 672
+A DVT P G P+D
Sbjct: 66 QANDVTGPDGAPLD--------SDRNNTRGGYGYGGNGYRRNGGGDGGYRSGGGECYTCG 117
Query: 673 XXXHMARDCXXXXXXXXXXXXXXXXXXXXXXXHMARECP------XXXXXXXXXXXCFTC 834
H+ARDC H+AR+C C+TC
Sbjct: 118 RTGHLARDCDRSSGGGGGGGRGGGCYNCGATGHLARDCDRASGGGGDGYRRSGNDGCYTC 177
Query: 835 GEPGHMARDCMXXXXXXXXXXXXXXXXXXXXXXXXXXKCFNCGESGHFAREC 990
G GHMARDC C+ CG GH AR+C
Sbjct: 178 GGYGHMARDC------------PSSGRLGGGGGGGSGACYTCGAQGHMARDC 217
>ref|XP_009588212.1| PREDICTED: cold shock domain-containing protein 3-like [Nicotiana
tomentosiformis]
Length = 264
Score = 122 bits (306), Expect = 3e-28
Identities = 79/232 (34%), Positives = 95/232 (40%), Gaps = 6/232 (2%)
Frame = +1
Query: 313 SRSKGVVTKFNDQKGYGFIQPDEGGEDLFVHQTAIKSDGYRTLREGQVVEFTIILDGDKT 492
SR GVV+KFN+QKGYGFI+PD+G EDLFVHQ+ IKSDGYR+L EGQ VEFT+ + GDK
Sbjct: 6 SRMTGVVSKFNNQKGYGFIKPDDGSEDLFVHQSEIKSDGYRSLYEGQKVEFTMTVKGDKY 65
Query: 493 KATDVTAPGGGPVDLTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 672
+A DVT P G P+D
Sbjct: 66 QANDVTGPDGAPLD--------SGRNNTRGGYGYGGSGYRRNGGGDGGYRSGGGECYACG 117
Query: 673 XXXHMARDCXXXXXXXXXXXXXXXXXXXXXXXHMARECP------XXXXXXXXXXXCFTC 834
H+ARDC H+AR+C C+TC
Sbjct: 118 RTGHLARDC-DRSSGGGGGGRGGGCYNCGATGHLARDCDRASGGGGDGYRRSGNDGCYTC 176
Query: 835 GEPGHMARDCMXXXXXXXXXXXXXXXXXXXXXXXXXXKCFNCGESGHFAREC 990
G GHMARDC C+ CG GH AR+C
Sbjct: 177 GGYGHMARDC-----------PSSGRLGGGGGGGGSGACYTCGAQGHMARDC 217
>ref|XP_015065865.1| PREDICTED: cold shock domain-containing protein 3-like [Solanum
pennellii]
Length = 258
Score = 121 bits (304), Expect = 4e-28
Identities = 81/250 (32%), Positives = 101/250 (40%), Gaps = 24/250 (9%)
Frame = +1
Query: 313 SRSKGVVTKFNDQKGYGFIQPDEGGEDLFVHQTAIKSDGYRTLREGQVVEFTIILDGDKT 492
SR G V+KF++ KGYGFI+PD+G EDLFVHQ+ IKSDGYR+L EGQ VEFT+ ++GDK
Sbjct: 6 SRMTGTVSKFSNPKGYGFIKPDDGSEDLFVHQSEIKSDGYRSLYEGQKVEFTMTVNGDKY 65
Query: 493 KATDVTAPGGGPVDLTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 672
+ATDVT P G P+D +
Sbjct: 66 QATDVTGPDGAPLD-SGRNGRGNSNSRGGGGYGYGGDDGGYRRNGNDGGYRSAGECYNCG 124
Query: 673 XXXHMARDCXXXXXXXXXXXXXXXXXXXXXXXHMAREC---PXXXXXXXXXXXCFTCGEP 843
H+ARDC H+AR+C C+TCG
Sbjct: 125 RTGHLARDC--DRNSGGGGGGRGGCYNCGAAGHLARDCDRSSGGGGGGASGGVCYTCGGY 182
Query: 844 GHMARDC---------------------MXXXXXXXXXXXXXXXXXXXXXXXXXXKCFNC 960
GHMAR+C KC+NC
Sbjct: 183 GHMARNCPSAGRVGARGGGGSGACYSCGAQGHLARDCPGGGGSNFGRSGGGSGGSKCYNC 242
Query: 961 GESGHFAREC 990
GE+GHFAREC
Sbjct: 243 GEAGHFAREC 252
>ref|XP_006340741.1| PREDICTED: cold shock domain-containing protein 3-like [Solanum
tuberosum]
Length = 261
Score = 120 bits (302), Expect = 9e-28
Identities = 82/253 (32%), Positives = 99/253 (39%), Gaps = 27/253 (10%)
Frame = +1
Query: 313 SRSKGVVTKFNDQKGYGFIQPDEGGEDLFVHQTAIKSDGYRTLREGQVVEFTIILDGDKT 492
SR G V+KFN+ KGYGFI+PD+G EDLFVHQ+ IKSDGYR+L EGQ VEFT+ + GDK
Sbjct: 6 SRMTGTVSKFNNPKGYGFIKPDDGSEDLFVHQSEIKSDGYRSLYEGQKVEFTMTVKGDKY 65
Query: 493 KATDVTAPGGGPVDLTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 672
+A DVT P G P+D +
Sbjct: 66 QAIDVTGPDGAPLD-SGRNGRGNSNSRGGGGYGHGGDDGGYRRNGNDGGYRSAGECYNCG 124
Query: 673 XXXHMARDCXXXXXXXXXXXXXXXXXXXXXXXHMAREC---PXXXXXXXXXXXCFTCGEP 843
H+ARDC H+AR+C C+TCG
Sbjct: 125 RTGHLARDC--DRNSGGGGGGRGGCYNCGAAGHLARDCDRSSGGGGGGASDGVCYTCGGY 182
Query: 844 GHMARDC------------------------MXXXXXXXXXXXXXXXXXXXXXXXXXXKC 951
GHMARDC KC
Sbjct: 183 GHMARDCPSAGRVGGRGGGGGGACYTCGAQGHLARDCPGGGGGGGSNFGRSGGGSGGSKC 242
Query: 952 FNCGESGHFAREC 990
+NCGE+GHFAREC
Sbjct: 243 YNCGEAGHFAREC 255
>ref|XP_004232496.1| PREDICTED: cold shock domain-containing protein 3-like [Solanum
lycopersicum]
Length = 260
Score = 119 bits (299), Expect = 2e-27
Identities = 81/252 (32%), Positives = 99/252 (39%), Gaps = 26/252 (10%)
Frame = +1
Query: 313 SRSKGVVTKFNDQKGYGFIQPDEGGEDLFVHQTAIKSDGYRTLREGQVVEFTIILDGDKT 492
SR G V+KF++ KGYGFI+PD+G EDLFVHQ+ IKSDGYR+L EGQ VEFT+ + GDK
Sbjct: 6 SRMTGTVSKFSNPKGYGFIKPDDGSEDLFVHQSEIKSDGYRSLYEGQKVEFTMTVKGDKY 65
Query: 493 KATDVTAPGGGPVDLTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 672
+A DVT P G P+D +
Sbjct: 66 QAIDVTGPDGAPLD-SGRNGRGNSNSRGGGGYGYGGDDGGYRRNGNDGGYRSAGECYNCG 124
Query: 673 XXXHMARDCXXXXXXXXXXXXXXXXXXXXXXXHMARECP-----XXXXXXXXXXXCFTCG 837
H+ARDC H+AR+C C+TCG
Sbjct: 125 RTGHLARDC--DRNSGGGGGGRGGCYNCGAAGHLARDCDRSSGGGGGGGGASGGVCYTCG 182
Query: 838 EPGHMARDC---------------------MXXXXXXXXXXXXXXXXXXXXXXXXXXKCF 954
GHMARDC KC+
Sbjct: 183 GYGHMARDCPSAGRVGGRGGGGSGACYSCGAQGHLARDCPGGGGSNFGRSGGGSGGSKCY 242
Query: 955 NCGESGHFAREC 990
NCGE+GHFAREC
Sbjct: 243 NCGEAGHFAREC 254
>ref|XP_010113340.1| Glycine-rich protein 2 [Morus notabilis]
gi|587949145|gb|EXC35347.1| Glycine-rich protein 2
[Morus notabilis]
Length = 258
Score = 117 bits (294), Expect = 1e-26
Identities = 86/251 (34%), Positives = 98/251 (39%), Gaps = 16/251 (6%)
Frame = +1
Query: 295 MAEEKLSRSKGVVTKFNDQKGYGFIQPDEGGEDLFVHQTAIKSDGYRTLREGQVVEFTI- 471
MAEE RS G V FND KG+GFI PD+GGEDLFVHQ++IKSDG+R+L EG VEF I
Sbjct: 1 MAEE---RSTGKVRWFNDSKGFGFITPDDGGEDLFVHQSSIKSDGFRSLAEGDTVEFQIA 57
Query: 472 ILDGDKTKATDVTAPGGGPVDLTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 651
I D KTKA DVT PGG + T
Sbjct: 58 IADDGKTKAVDVTGPGGSSLQGT-KKGGGGRGGGFGGGGFGGGGFGGGWRGGDRRNGGGG 116
Query: 652 XXXXXXXXXXHMARDC------XXXXXXXXXXXXXXXXXXXXXXXHMARECP-------- 789
H+ARDC HMAR CP
Sbjct: 117 SGCFNCGDPGHLARDCDRDRGNNGNFGGGGGGGGGGGCFSCGEFGHMARNCPRASGGAGG 176
Query: 790 -XXXXXXXXXXXCFTCGEPGHMARDCMXXXXXXXXXXXXXXXXXXXXXXXXXXKCFNCGE 966
C+ CGE GH+ARDC C+NCGE
Sbjct: 177 GVGGGGGGGGGGCYKCGEFGHLARDC-----------------NRGGGGGGSGGCYNCGE 219
Query: 967 SGHFARECKEA 999
GH AREC +A
Sbjct: 220 FGHMARECSKA 230
>gb|KDP46764.1| hypothetical protein JCGZ_06552 [Jatropha curcas]
Length = 268
Score = 115 bits (287), Expect = 1e-25
Identities = 84/267 (31%), Positives = 102/267 (38%), Gaps = 34/267 (12%)
Frame = +1
Query: 298 AEEKLS-RSKGVVTKFNDQKGYGFIQPDEGGEDLFVHQTAIKSD-GYRTLREGQVVEFTI 471
AEEK + RS G V +F+D+KG+GFI+PD+GG+DLFVH TAIKSD GYR+L E + VEFT+
Sbjct: 3 AEEKTAVRSTGKVVRFSDRKGFGFIKPDDGGDDLFVHHTAIKSDGGYRSLTEDETVEFTV 62
Query: 472 ILDGDKTKATDVTAPGGGPVDLT--PXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 645
L DK +A +VTAPGGGP+
Sbjct: 63 ALSDDKYQAINVTAPGGGPIQANNRRGEGGSAKRGGGFGGSWNRRNNGGGYSGSGGGAGA 122
Query: 646 XXXXXXXXXXXXHMARDCXXXXXXXXXXXXXXXXXXXXXXXHMARECP----------XX 795
H+ARDC H AR+CP
Sbjct: 123 GGAGCYNCGSPGHIARDC---DNRGGSENNNGGCFKCGNSGHFARDCPRATNGGGVTGGG 179
Query: 796 XXXXXXXXXCFTCGEPG--------------------HMARDCMXXXXXXXXXXXXXXXX 915
CF CG G H+ARDC
Sbjct: 180 DRSSSSNGACFKCGGYGHLARSCPGGGGACYNCGGFGHLARDCTSARGTGGGRFGSRGGG 239
Query: 916 XXXXXXXXXXKCFNCGESGHFARECKE 996
CFNCGE GHFAREC +
Sbjct: 240 GGGGGGGSSGGCFNCGEEGHFARECPD 266
>ref|XP_012065977.1| PREDICTED: cold shock domain-containing protein 3 [Jatropha curcas]
Length = 272
Score = 115 bits (287), Expect = 1e-25
Identities = 84/267 (31%), Positives = 102/267 (38%), Gaps = 34/267 (12%)
Frame = +1
Query: 298 AEEKLS-RSKGVVTKFNDQKGYGFIQPDEGGEDLFVHQTAIKSD-GYRTLREGQVVEFTI 471
AEEK + RS G V +F+D+KG+GFI+PD+GG+DLFVH TAIKSD GYR+L E + VEFT+
Sbjct: 7 AEEKTAVRSTGKVVRFSDRKGFGFIKPDDGGDDLFVHHTAIKSDGGYRSLTEDETVEFTV 66
Query: 472 ILDGDKTKATDVTAPGGGPVDLT--PXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 645
L DK +A +VTAPGGGP+
Sbjct: 67 ALSDDKYQAINVTAPGGGPIQANNRRGEGGSAKRGGGFGGSWNRRNNGGGYSGSGGGAGA 126
Query: 646 XXXXXXXXXXXXHMARDCXXXXXXXXXXXXXXXXXXXXXXXHMARECP----------XX 795
H+ARDC H AR+CP
Sbjct: 127 GGAGCYNCGSPGHIARDC---DNRGGSENNNGGCFKCGNSGHFARDCPRATNGGGVTGGG 183
Query: 796 XXXXXXXXXCFTCGEPG--------------------HMARDCMXXXXXXXXXXXXXXXX 915
CF CG G H+ARDC
Sbjct: 184 DRSSSSNGACFKCGGYGHLARSCPGGGGACYNCGGFGHLARDCTSARGTGGGRFGSRGGG 243
Query: 916 XXXXXXXXXXKCFNCGESGHFARECKE 996
CFNCGE GHFAREC +
Sbjct: 244 GGGGGGGSSGGCFNCGEEGHFARECPD 270
>ref|XP_004234533.1| PREDICTED: cold shock domain-containing protein 3 [Solanum
lycopersicum]
Length = 288
Score = 114 bits (284), Expect = 5e-25
Identities = 75/232 (32%), Positives = 96/232 (41%), Gaps = 1/232 (0%)
Frame = +1
Query: 313 SRSKGVVTKFNDQKGYGFIQPDEGGEDLFVHQTAIKSDGYRTLREGQVVEFTIILDGDKT 492
+R GVV++F++QKGYGFI+PD+G EDLFVHQ+ IKS+G+R+L EGQ VEF + +GDK
Sbjct: 6 TRLTGVVSRFSNQKGYGFIKPDDGTEDLFVHQSEIKSEGFRSLYEGQKVEFMVTGNGDKY 65
Query: 493 KATDVTAPGGGPVDLTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 672
+A DVT P G P+D
Sbjct: 66 QAVDVTGPDGAPLD-------GGRNGGGGGGGRGMVRGGDRRNGNGFLRSGGGGECYNCG 118
Query: 673 XXXHMARDCXXXXXXXXXXXXXXXXXXXXXXXHMAREC-PXXXXXXXXXXXCFTCGEPGH 849
HMARDC H+AR+C C+TCG GH
Sbjct: 119 RVGHMARDC--DLVSGGGGGGGGACYTCGMTGHIARDCVGVGGGAGSGGGACYTCGMTGH 176
Query: 850 MARDCMXXXXXXXXXXXXXXXXXXXXXXXXXXKCFNCGESGHFARECKEAPR 1005
+ARDC C+NCG GH AR+C R
Sbjct: 177 IARDC-------------DRSGGGGGGGAGSGGCYNCGGLGHMARDCPSERR 215
Score = 59.7 bits (143), Expect = 2e-06
Identities = 34/108 (31%), Positives = 40/108 (37%), Gaps = 5/108 (4%)
Frame = +1
Query: 682 HMARDCXXXXXXXXXXXXXXXXXXXXXXXHMARECPXXXXXXXXXXX-----CFTCGEPG 846
H+ARDC HMAR+CP C+ CG PG
Sbjct: 176 HIARDCDRSGGGGGGGAGSGGCYNCGGLGHMARDCPSERRGGGSGAGGGSGACYNCGLPG 235
Query: 847 HMARDCMXXXXXXXXXXXXXXXXXXXXXXXXXXKCFNCGESGHFAREC 990
H+ARDC KC+NCGE+GHFAREC
Sbjct: 236 HLARDCSRESGGGDRFGRSSGDRFGRSSGGGS-KCYNCGETGHFAREC 282
>ref|XP_008361343.1| PREDICTED: cold shock protein 1-like [Malus domestica]
Length = 263
Score = 113 bits (282), Expect = 6e-25
Identities = 84/264 (31%), Positives = 97/264 (36%), Gaps = 28/264 (10%)
Frame = +1
Query: 295 MAEEKLSRSKGVVTKFNDQKGYGFIQPDEGGEDLFVHQTAIKSDGYRTLREGQVVEFTII 474
MAEE RS G V FND KGYGFI PD+GGEDLFVHQ++I+SDG+RT+ EG+ VEF I
Sbjct: 1 MAEE---RSTGKVRWFNDVKGYGFITPDDGGEDLFVHQSSIRSDGFRTVAEGETVEFFID 57
Query: 475 L-DGDKTKATDVTAPGGGPVDLTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 651
D KTKA DVT P G P+
Sbjct: 58 FGDDGKTKAVDVTGPNGAPLVGNKKETFGRSGGRGGGGGGFGFGGGWRGGDRRNGGGAGG 117
Query: 652 XXXXXXXXXXHMARDCXXXXXXXXXXXXXXXXXXXXXXXHMARECP-----XXXXXXXXX 816
HMARDC H+AR CP
Sbjct: 118 DGCYSCGEPGHMARDC--RQGSGGGGAGGGGCFTCGGYGHVARVCPNGTXGGGGGGGGGG 175
Query: 817 XXCFTCGEPGHMARDCM----------------------XXXXXXXXXXXXXXXXXXXXX 930
C+ CG GHMARDC
Sbjct: 176 GGCYKCGAFGHMARDCATGGGGGAGAGSGACYSCGAYGHMARDCSGGGGDSSARGGGRYG 235
Query: 931 XXXXXKCFNCGESGHFARECKEAP 1002
C+NCGE+GHFA+EC P
Sbjct: 236 LSSGSGCYNCGEAGHFAKECANPP 259
>ref|XP_015071070.1| PREDICTED: cold shock domain-containing protein 3 [Solanum pennellii]
Length = 291
Score = 113 bits (282), Expect = 1e-24
Identities = 75/234 (32%), Positives = 96/234 (41%), Gaps = 3/234 (1%)
Frame = +1
Query: 313 SRSKGVVTKFNDQKGYGFIQPDEGGEDLFVHQTAIKSDGYRTLREGQVVEFTIILDGDKT 492
+R GVV++F++QKGYGFI+PD+G EDLFVHQ+ IKS+G+R+L EGQ VEF + +GDK
Sbjct: 6 TRLTGVVSRFSNQKGYGFIKPDDGTEDLFVHQSEIKSEGFRSLYEGQKVEFMVTGNGDKY 65
Query: 493 KATDVTAPGGGPVDLTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 672
+A DVT P G P+D
Sbjct: 66 QAVDVTGPDGAPLD-------GGRNGGGGGGGRGMGRGGDRRNGNGFLRSGGGGECYNCG 118
Query: 673 XXXHMARDC--XXXXXXXXXXXXXXXXXXXXXXXHMAREC-PXXXXXXXXXXXCFTCGEP 843
HMARDC H+AR+C C+TCG
Sbjct: 119 RVGHMARDCDLVSGGGGGGGGGGGGACYTCGMTGHIARDCVGVGGGAGSGGGACYTCGMT 178
Query: 844 GHMARDCMXXXXXXXXXXXXXXXXXXXXXXXXXXKCFNCGESGHFARECKEAPR 1005
GH+ARDC C+NCG GH AR+C R
Sbjct: 179 GHIARDC--------------DRSGGGGGGAGSGGCYNCGGLGHMARDCPSERR 218
>ref|XP_015951886.1| PREDICTED: cold shock domain-containing protein 3 [Arachis
duranensis]
Length = 264
Score = 111 bits (278), Expect = 2e-24
Identities = 80/243 (32%), Positives = 97/243 (39%), Gaps = 11/243 (4%)
Frame = +1
Query: 295 MAEEKLSRSKGVVTKFNDQKGYGFIQPDEGGEDLFVHQTAIKSDGYRTLREGQVVEFTII 474
MAEE+ + GVV FN+ KG+GFI+PD+GGEDLFVHQ++I+SDGYRTL EG V+F+I
Sbjct: 1 MAEERFT---GVVMWFNNTKGFGFIKPDDGGEDLFVHQSSIRSDGYRTLHEGDRVQFSIA 57
Query: 475 L-DGDKTKATDVTAPGGGPVDLTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 651
D KTKA DVTAP G P+ P
Sbjct: 58 TGDNHKTKAVDVTAPDGNPLHSRP------KESGGSGFGAGWRRNGGASGGGGGAAGSGG 111
Query: 652 XXXXXXXXXXHMARDC-XXXXXXXXXXXXXXXXXXXXXXXHMAREC---------PXXXX 801
H+ARDC H+AR+C
Sbjct: 112 AGCYHCGEVGHLARDCNRSNNSGGAGGGSGGACFNCGGFGHLARDCLRGSGGGNGNGHGG 171
Query: 802 XXXXXXXCFTCGEPGHMARDCMXXXXXXXXXXXXXXXXXXXXXXXXXXKCFNCGESGHFA 981
CF CG GHMARDC C+ CGE GH A
Sbjct: 172 GGVGGVSCFRCGGFGHMARDCATARTSGGAGGGAGGGG-----------CYRCGEVGHLA 220
Query: 982 REC 990
R+C
Sbjct: 221 RDC 223
>ref|XP_002533802.1| PREDICTED: cold shock domain-containing protein 3 [Ricinus
communis] gi|223526275|gb|EEF28589.1| cellular nucleic
acid binding protein, putative [Ricinus communis]
Length = 266
Score = 104 bits (260), Expect = 6e-22
Identities = 54/83 (65%), Positives = 68/83 (81%), Gaps = 3/83 (3%)
Frame = +1
Query: 292 SMAEEKLS-RSKGVVTKFNDQKGYGFIQPDEGGEDLFVHQTAIKSDG-YRTLREGQVVEF 465
SMAEE+ RS+G V +F+D+KG+GFI+PD+GGEDLFVH +AIKSDG YR+L E VVEF
Sbjct: 4 SMAEEQTGVRSRGKVVRFSDRKGFGFIKPDDGGEDLFVHHSAIKSDGRYRSLAEDDVVEF 63
Query: 466 TIIL-DGDKTKATDVTAPGGGPV 531
T+ L D +K +A DVTAPGGGP+
Sbjct: 64 TVSLSDDNKYQAVDVTAPGGGPI 86
>ref|XP_006383095.1| cold-shock DNA-binding family protein [Populus trichocarpa]
gi|550338672|gb|ERP60892.1| cold-shock DNA-binding
family protein [Populus trichocarpa]
Length = 235
Score = 103 bits (257), Expect = 9e-22
Identities = 53/85 (62%), Positives = 67/85 (78%), Gaps = 6/85 (7%)
Frame = +1
Query: 295 MAEEKLS-----RSKGVVTKFNDQKGYGFIQPDEGGEDLFVHQTAIKSD-GYRTLREGQV 456
MAEE+++ RS G V +F+D+KG+GFI+PD G +DLFVH +AIKSD GYRTL E V
Sbjct: 1 MAEEQVAATKEERSTGRVVRFSDKKGFGFIKPDAGDKDLFVHHSAIKSDGGYRTLYEDDV 60
Query: 457 VEFTIILDGDKTKATDVTAPGGGPV 531
VEFTI+L+ DK +A DVTAPGGGP+
Sbjct: 61 VEFTILLNDDKYQAVDVTAPGGGPI 85
>ref|XP_006380594.1| cold-shock DNA-binding family protein [Populus trichocarpa]
gi|550334484|gb|ERP58391.1| cold-shock DNA-binding
family protein [Populus trichocarpa]
Length = 243
Score = 101 bits (252), Expect = 5e-21
Identities = 51/85 (60%), Positives = 64/85 (75%), Gaps = 1/85 (1%)
Frame = +1
Query: 280 DLLPSMAEEKLSRSKGVVTKFNDQKGYGFIQPDEGGEDLFVHQTAIKSD-GYRTLREGQV 456
D+ +A K RS G V +F+D+KG+GFI+PD G +DLFVH +AIKSD GYRTL E V
Sbjct: 8 DVAADVAATKEERSTGRVVRFSDKKGFGFIKPDVGDKDLFVHHSAIKSDGGYRTLYEDDV 67
Query: 457 VEFTIILDGDKTKATDVTAPGGGPV 531
VEFTI+L DK +A +VTAPGGGP+
Sbjct: 68 VEFTILLTEDKYQAIEVTAPGGGPI 92