BLASTX nr result
ID: Rehmannia28_contig00010680
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia28_contig00010680
(357 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011082908.1| PREDICTED: pentatricopeptide repeat-containi... 203 5e-61
ref|XP_009598200.1| PREDICTED: pentatricopeptide repeat-containi... 194 2e-57
gb|EYU29595.1| hypothetical protein MIMGU_mgv1a025435mg [Erythra... 191 2e-56
ref|XP_012846716.1| PREDICTED: pentatricopeptide repeat-containi... 191 1e-55
ref|XP_009762871.1| PREDICTED: pentatricopeptide repeat-containi... 188 2e-55
ref|XP_006356395.1| PREDICTED: pentatricopeptide repeat-containi... 187 5e-55
ref|XP_010313232.1| PREDICTED: pentatricopeptide repeat-containi... 186 1e-54
ref|XP_010313231.1| PREDICTED: pentatricopeptide repeat-containi... 186 2e-54
ref|XP_004250888.1| PREDICTED: pentatricopeptide repeat-containi... 186 2e-54
ref|XP_015056628.1| PREDICTED: pentatricopeptide repeat-containi... 185 3e-54
ref|XP_008229420.1| PREDICTED: pentatricopeptide repeat-containi... 179 2e-53
ref|XP_007048864.1| Pentatricopeptide repeat (PPR-like) superfam... 181 1e-52
ref|XP_008229419.1| PREDICTED: pentatricopeptide repeat-containi... 179 7e-52
ref|XP_012489426.1| PREDICTED: pentatricopeptide repeat-containi... 176 1e-50
ref|XP_015880153.1| PREDICTED: pentatricopeptide repeat-containi... 176 2e-50
ref|XP_008380208.1| PREDICTED: pentatricopeptide repeat-containi... 175 4e-50
ref|XP_002279693.1| PREDICTED: pentatricopeptide repeat-containi... 174 5e-50
ref|XP_009356621.1| PREDICTED: pentatricopeptide repeat-containi... 172 3e-49
emb|CDP06172.1| unnamed protein product [Coffea canephora] 171 1e-48
ref|XP_003617444.1| PPR containing plant-like protein [Medicago ... 171 2e-48
>ref|XP_011082908.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic [Sesamum indicum]
Length = 520
Score = 203 bits (516), Expect = 5e-61
Identities = 95/117 (81%), Positives = 107/117 (91%)
Frame = +2
Query: 5 SWNSMISGFVRNGKWIEALDLFCEMQDMKIRPSEFTLVSTLNACAKLGALGQGKWIHDYI 184
SWN+MISG+VRNGKWIEAL+LF EMQ+M I+PSEFTLVS LNACAKLGAL QGKWIHDYI
Sbjct: 222 SWNTMISGYVRNGKWIEALELFYEMQEMGIKPSEFTLVSVLNACAKLGALEQGKWIHDYI 281
Query: 185 KKNNIEMNVIVVTAIIDMYCKCGNIETARHVYETAPRKGLSSWNSMMLGLATNGFEN 355
KKN +E+NVIV+TAIIDMYCK G++ETAR V+ T P KGLSSWNSMMLGLATNGFE+
Sbjct: 282 KKNGVELNVIVITAIIDMYCKSGDVETARQVFVTTPWKGLSSWNSMMLGLATNGFED 338
Score = 67.8 bits (164), Expect = 5e-11
Identities = 37/114 (32%), Positives = 60/114 (52%), Gaps = 1/114 (0%)
Frame = +2
Query: 8 WNSMISGFVRNGKWIEALDLFCEMQ-DMKIRPSEFTLVSTLNACAKLGALGQGKWIHDYI 184
WN++I GF ++ A+ LF EM D +++P + T S A +LG G +H I
Sbjct: 90 WNTVIRGFSQSSDPHVAISLFVEMLVDSRVQPEKLTYPSVFKAYTQLGLAEDGAQLHGRI 149
Query: 185 KKNNIEMNVIVVTAIIDMYCKCGNIETARHVYETAPRKGLSSWNSMMLGLATNG 346
K +E + + +II MY CG + A +++ + +WNSM++GLA G
Sbjct: 150 VKLGLEFDPFIRNSIIHMYANCGLLGNAWKLFDEDRDSDVVAWNSMVMGLAKCG 203
>ref|XP_009598200.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic [Nicotiana tomentosiformis]
Length = 526
Score = 194 bits (493), Expect = 2e-57
Identities = 91/117 (77%), Positives = 103/117 (88%)
Frame = +2
Query: 5 SWNSMISGFVRNGKWIEALDLFCEMQDMKIRPSEFTLVSTLNACAKLGALGQGKWIHDYI 184
SWNSMISGFVRNGKW EALDLF MQ+ KI+PSEFTLVS LNAC LGAL QG WI++Y+
Sbjct: 222 SWNSMISGFVRNGKWTEALDLFSTMQEEKIKPSEFTLVSLLNACGHLGALEQGNWIYNYV 281
Query: 185 KKNNIEMNVIVVTAIIDMYCKCGNIETARHVYETAPRKGLSSWNSMMLGLATNGFEN 355
KKNN+++NVIVVTAIIDMYCKC NIE A V+E+AP KGLSSWNSM+LGLATNGFE+
Sbjct: 282 KKNNVKLNVIVVTAIIDMYCKCANIEMAWQVFESAPNKGLSSWNSMILGLATNGFED 338
Score = 65.9 bits (159), Expect = 3e-10
Identities = 36/114 (31%), Positives = 59/114 (51%), Gaps = 1/114 (0%)
Frame = +2
Query: 8 WNSMISGFVRNGKWIEALDLFCEMQDM-KIRPSEFTLVSTLNACAKLGALGQGKWIHDYI 184
WN++I GF + A+ LF EM + +I+P T S A +LG G +H I
Sbjct: 90 WNTIIRGFSESSTPQYAIHLFIEMLTISEIQPQLLTYPSVFKAYTRLGLAKSGTQLHGRI 149
Query: 185 KKNNIEMNVIVVTAIIDMYCKCGNIETARHVYETAPRKGLSSWNSMMLGLATNG 346
K ++ + V ++ MY CG + AR +++ + + +WNSM++GLA G
Sbjct: 150 IKLGLQFDTFVKNTMLHMYASCGFLFEARKLFDEDEDEDVVAWNSMIMGLAKTG 203
>gb|EYU29595.1| hypothetical protein MIMGU_mgv1a025435mg [Erythranthe guttata]
Length = 505
Score = 191 bits (484), Expect = 2e-56
Identities = 91/119 (76%), Positives = 103/119 (86%), Gaps = 3/119 (2%)
Frame = +2
Query: 5 SWNSMISGFVRNGKWIEALDLFCEMQDMKIRPSEFTLVSTLNACAKLGALGQGKWIHDYI 184
SWN+MISG+VRNGKW++AL LF EMQ +IRPSEFTLVS LNACAKLGAL QGKWIH YI
Sbjct: 206 SWNTMISGYVRNGKWVDALSLFAEMQQRQIRPSEFTLVSMLNACAKLGALEQGKWIHRYI 265
Query: 185 KK---NNIEMNVIVVTAIIDMYCKCGNIETARHVYETAPRKGLSSWNSMMLGLATNGFE 352
KK NNI+ N IVVTAIIDMYCKCG+I+TAR V+E+ P+K LS WNSM+LGLATNGFE
Sbjct: 266 KKSDINNIDRNTIVVTAIIDMYCKCGDIKTAREVFESTPQKALSGWNSMILGLATNGFE 324
Score = 67.0 bits (162), Expect = 1e-10
Identities = 37/115 (32%), Positives = 59/115 (51%), Gaps = 1/115 (0%)
Frame = +2
Query: 5 SWNSMISGFVRNGKWIEALDLFCEM-QDMKIRPSEFTLVSTLNACAKLGALGQGKWIHDY 181
+WN++I GF ++ A+ LF +M + + P T S A +LG G G +H
Sbjct: 73 TWNTIIRGFCQSSHPHVAISLFVDMLTNSTLEPENLTYPSVFKAYTQLGLAGDGAQLHGR 132
Query: 182 IKKNNIEMNVIVVTAIIDMYCKCGNIETARHVYETAPRKGLSSWNSMMLGLATNG 346
I K E + + +II MY CG +AR +++ + +WNSM++GLA G
Sbjct: 133 IIKLGFEHDPFIRNSIIHMYADCGLFGSARKLFDEDEDTDVVAWNSMVMGLAKCG 187
>ref|XP_012846716.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic [Erythranthe guttata]
Length = 611
Score = 191 bits (484), Expect = 1e-55
Identities = 91/119 (76%), Positives = 103/119 (86%), Gaps = 3/119 (2%)
Frame = +2
Query: 5 SWNSMISGFVRNGKWIEALDLFCEMQDMKIRPSEFTLVSTLNACAKLGALGQGKWIHDYI 184
SWN+MISG+VRNGKW++AL LF EMQ +IRPSEFTLVS LNACAKLGAL QGKWIH YI
Sbjct: 312 SWNTMISGYVRNGKWVDALSLFAEMQQRQIRPSEFTLVSMLNACAKLGALEQGKWIHRYI 371
Query: 185 KK---NNIEMNVIVVTAIIDMYCKCGNIETARHVYETAPRKGLSSWNSMMLGLATNGFE 352
KK NNI+ N IVVTAIIDMYCKCG+I+TAR V+E+ P+K LS WNSM+LGLATNGFE
Sbjct: 372 KKSDINNIDRNTIVVTAIIDMYCKCGDIKTAREVFESTPQKALSGWNSMILGLATNGFE 430
Score = 67.0 bits (162), Expect = 1e-10
Identities = 37/115 (32%), Positives = 59/115 (51%), Gaps = 1/115 (0%)
Frame = +2
Query: 5 SWNSMISGFVRNGKWIEALDLFCEM-QDMKIRPSEFTLVSTLNACAKLGALGQGKWIHDY 181
+WN++I GF ++ A+ LF +M + + P T S A +LG G G +H
Sbjct: 179 TWNTIIRGFCQSSHPHVAISLFVDMLTNSTLEPENLTYPSVFKAYTQLGLAGDGAQLHGR 238
Query: 182 IKKNNIEMNVIVVTAIIDMYCKCGNIETARHVYETAPRKGLSSWNSMMLGLATNG 346
I K E + + +II MY CG +AR +++ + +WNSM++GLA G
Sbjct: 239 IIKLGFEHDPFIRNSIIHMYADCGLFGSARKLFDEDEDTDVVAWNSMVMGLAKCG 293
>ref|XP_009762871.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic [Nicotiana sylvestris]
Length = 525
Score = 188 bits (478), Expect = 2e-55
Identities = 87/117 (74%), Positives = 102/117 (87%)
Frame = +2
Query: 5 SWNSMISGFVRNGKWIEALDLFCEMQDMKIRPSEFTLVSTLNACAKLGALGQGKWIHDYI 184
SWNSMISGFVRNG WIEAL+LF MQ+ KI+PSEFTLVS LNAC LGAL QG WI++Y+
Sbjct: 222 SWNSMISGFVRNGNWIEALNLFNAMQEEKIKPSEFTLVSLLNACGHLGALEQGNWIYNYV 281
Query: 185 KKNNIEMNVIVVTAIIDMYCKCGNIETARHVYETAPRKGLSSWNSMMLGLATNGFEN 355
K+NN+++NVIVVTAIIDMYCKC N+E A V+E+AP KGLSSWNSM+LGL TNGFE+
Sbjct: 282 KRNNVKLNVIVVTAIIDMYCKCANVEMAWQVFESAPNKGLSSWNSMILGLGTNGFED 338
Score = 65.9 bits (159), Expect = 3e-10
Identities = 35/114 (30%), Positives = 58/114 (50%), Gaps = 1/114 (0%)
Frame = +2
Query: 8 WNSMISGFVRNGKWIEALDLFCEMQDMK-IRPSEFTLVSTLNACAKLGALGQGKWIHDYI 184
WN+MI GF + A+ LF EM I+P T S A +LG G +H I
Sbjct: 90 WNTMIRGFSESSTPQYAIHLFIEMLTTSDIQPQLLTYPSVFKAYTRLGLANSGTQLHGRI 149
Query: 185 KKNNIEMNVIVVTAIIDMYCKCGNIETARHVYETAPRKGLSSWNSMMLGLATNG 346
K +E + + ++ MY CG + AR +++ + + +WNS+++G+A +G
Sbjct: 150 IKLGLEFDTFIRNTMLHMYASCGFLIEARKLFDEDEDEDVVAWNSLIIGIAKSG 203
>ref|XP_006356395.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic-like [Solanum tuberosum]
Length = 522
Score = 187 bits (476), Expect = 5e-55
Identities = 88/117 (75%), Positives = 100/117 (85%)
Frame = +2
Query: 5 SWNSMISGFVRNGKWIEALDLFCEMQDMKIRPSEFTLVSTLNACAKLGALGQGKWIHDYI 184
SWNSMISGFVRNGKW EAL+LF MQ+ I+PSEFTLVS LNAC LGAL QG WI+ Y+
Sbjct: 219 SWNSMISGFVRNGKWNEALELFSTMQEENIKPSEFTLVSLLNACGHLGALEQGNWIYKYV 278
Query: 185 KKNNIEMNVIVVTAIIDMYCKCGNIETARHVYETAPRKGLSSWNSMMLGLATNGFEN 355
KKNN+E+NVIVVTAIIDMYCKCGN+E A HV+ + KGLSSWNSM+LGLATNGFE+
Sbjct: 279 KKNNVELNVIVVTAIIDMYCKCGNVEMAWHVFISISNKGLSSWNSMILGLATNGFED 335
Score = 66.6 bits (161), Expect = 1e-10
Identities = 36/115 (31%), Positives = 62/115 (53%), Gaps = 1/115 (0%)
Frame = +2
Query: 5 SWNSMISGFVRNGKWIEALDLFCEM-QDMKIRPSEFTLVSTLNACAKLGALGQGKWIHDY 181
+WN++I GF + A+ LF EM + +++P T S A A+ G + G +H
Sbjct: 86 TWNTIIRGFSESSTPQYAIHLFIEMLNNSQVQPHLLTYPSVFKAYARGGLVKNGAQLHGR 145
Query: 182 IKKNNIEMNVIVVTAIIDMYCKCGNIETARHVYETAPRKGLSSWNSMMLGLATNG 346
I K +E + + ++ MY CG + AR +++ + + SWNSM++GLA +G
Sbjct: 146 IIKLGLEFDTFIRNTMLYMYASCGFLVEARKLFDEDEIEDVVSWNSMIMGLAKSG 200
>ref|XP_010313232.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic isoform X3 [Solanum lycopersicum]
Length = 509
Score = 186 bits (472), Expect = 1e-54
Identities = 86/117 (73%), Positives = 100/117 (85%)
Frame = +2
Query: 5 SWNSMISGFVRNGKWIEALDLFCEMQDMKIRPSEFTLVSTLNACAKLGALGQGKWIHDYI 184
SWNSMISGFVRNGKW EAL+LF MQ+ ++PSEFTLVS LNAC LGAL QG WI+ Y+
Sbjct: 219 SWNSMISGFVRNGKWNEALELFSTMQEENVKPSEFTLVSLLNACGHLGALEQGNWIYKYV 278
Query: 185 KKNNIEMNVIVVTAIIDMYCKCGNIETARHVYETAPRKGLSSWNSMMLGLATNGFEN 355
KKNN+E+NVIVVTAIIDMYCKC N+E A HV+ ++ KGLSSWNSM+LGLATNGFE+
Sbjct: 279 KKNNVELNVIVVTAIIDMYCKCANVEMAWHVFVSSSNKGLSSWNSMILGLATNGFED 335
Score = 67.0 bits (162), Expect = 1e-10
Identities = 36/115 (31%), Positives = 61/115 (53%), Gaps = 1/115 (0%)
Frame = +2
Query: 5 SWNSMISGFVRNGKWIEALDLFCEM-QDMKIRPSEFTLVSTLNACAKLGALGQGKWIHDY 181
+WN++I GF + A+ LF EM + +++P T S A A+ G G +H
Sbjct: 86 TWNTIIRGFSESSTPQYAIHLFIEMLNNSQVQPHLLTYPSVFKAYARGGIAKNGAQLHGR 145
Query: 182 IKKNNIEMNVIVVTAIIDMYCKCGNIETARHVYETAPRKGLSSWNSMMLGLATNG 346
I K +E + + ++ MY CG + AR +++ + + SWNSM++GLA +G
Sbjct: 146 IMKLGLEFDTFIRNTLLYMYASCGFLVEARKLFDEDEIEDVVSWNSMIIGLAKSG 200
>ref|XP_010313231.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic isoform X2 [Solanum lycopersicum]
Length = 514
Score = 186 bits (472), Expect = 2e-54
Identities = 86/117 (73%), Positives = 100/117 (85%)
Frame = +2
Query: 5 SWNSMISGFVRNGKWIEALDLFCEMQDMKIRPSEFTLVSTLNACAKLGALGQGKWIHDYI 184
SWNSMISGFVRNGKW EAL+LF MQ+ ++PSEFTLVS LNAC LGAL QG WI+ Y+
Sbjct: 219 SWNSMISGFVRNGKWNEALELFSTMQEENVKPSEFTLVSLLNACGHLGALEQGNWIYKYV 278
Query: 185 KKNNIEMNVIVVTAIIDMYCKCGNIETARHVYETAPRKGLSSWNSMMLGLATNGFEN 355
KKNN+E+NVIVVTAIIDMYCKC N+E A HV+ ++ KGLSSWNSM+LGLATNGFE+
Sbjct: 279 KKNNVELNVIVVTAIIDMYCKCANVEMAWHVFVSSSNKGLSSWNSMILGLATNGFED 335
Score = 67.0 bits (162), Expect = 1e-10
Identities = 36/115 (31%), Positives = 61/115 (53%), Gaps = 1/115 (0%)
Frame = +2
Query: 5 SWNSMISGFVRNGKWIEALDLFCEM-QDMKIRPSEFTLVSTLNACAKLGALGQGKWIHDY 181
+WN++I GF + A+ LF EM + +++P T S A A+ G G +H
Sbjct: 86 TWNTIIRGFSESSTPQYAIHLFIEMLNNSQVQPHLLTYPSVFKAYARGGIAKNGAQLHGR 145
Query: 182 IKKNNIEMNVIVVTAIIDMYCKCGNIETARHVYETAPRKGLSSWNSMMLGLATNG 346
I K +E + + ++ MY CG + AR +++ + + SWNSM++GLA +G
Sbjct: 146 IMKLGLEFDTFIRNTLLYMYASCGFLVEARKLFDEDEIEDVVSWNSMIIGLAKSG 200
>ref|XP_004250888.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic isoform X1 [Solanum lycopersicum]
Length = 522
Score = 186 bits (472), Expect = 2e-54
Identities = 86/117 (73%), Positives = 100/117 (85%)
Frame = +2
Query: 5 SWNSMISGFVRNGKWIEALDLFCEMQDMKIRPSEFTLVSTLNACAKLGALGQGKWIHDYI 184
SWNSMISGFVRNGKW EAL+LF MQ+ ++PSEFTLVS LNAC LGAL QG WI+ Y+
Sbjct: 219 SWNSMISGFVRNGKWNEALELFSTMQEENVKPSEFTLVSLLNACGHLGALEQGNWIYKYV 278
Query: 185 KKNNIEMNVIVVTAIIDMYCKCGNIETARHVYETAPRKGLSSWNSMMLGLATNGFEN 355
KKNN+E+NVIVVTAIIDMYCKC N+E A HV+ ++ KGLSSWNSM+LGLATNGFE+
Sbjct: 279 KKNNVELNVIVVTAIIDMYCKCANVEMAWHVFVSSSNKGLSSWNSMILGLATNGFED 335
Score = 67.0 bits (162), Expect = 1e-10
Identities = 36/115 (31%), Positives = 61/115 (53%), Gaps = 1/115 (0%)
Frame = +2
Query: 5 SWNSMISGFVRNGKWIEALDLFCEM-QDMKIRPSEFTLVSTLNACAKLGALGQGKWIHDY 181
+WN++I GF + A+ LF EM + +++P T S A A+ G G +H
Sbjct: 86 TWNTIIRGFSESSTPQYAIHLFIEMLNNSQVQPHLLTYPSVFKAYARGGIAKNGAQLHGR 145
Query: 182 IKKNNIEMNVIVVTAIIDMYCKCGNIETARHVYETAPRKGLSSWNSMMLGLATNG 346
I K +E + + ++ MY CG + AR +++ + + SWNSM++GLA +G
Sbjct: 146 IMKLGLEFDTFIRNTLLYMYASCGFLVEARKLFDEDEIEDVVSWNSMIIGLAKSG 200
>ref|XP_015056628.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic [Solanum pennellii]
Length = 522
Score = 185 bits (470), Expect = 3e-54
Identities = 86/117 (73%), Positives = 100/117 (85%)
Frame = +2
Query: 5 SWNSMISGFVRNGKWIEALDLFCEMQDMKIRPSEFTLVSTLNACAKLGALGQGKWIHDYI 184
SWNSMISGFVRNGKW EAL+LF MQ+ ++PSEFTLVS LNAC LGAL QG WI+ Y+
Sbjct: 219 SWNSMISGFVRNGKWNEALELFSIMQEENVKPSEFTLVSLLNACGHLGALEQGNWIYKYV 278
Query: 185 KKNNIEMNVIVVTAIIDMYCKCGNIETARHVYETAPRKGLSSWNSMMLGLATNGFEN 355
KKNN+E+NVIVVTAIIDMYCKC N+E A HV+ ++ KGLSSWNSM+LGLATNGFE+
Sbjct: 279 KKNNVELNVIVVTAIIDMYCKCANVEMAWHVFVSSSNKGLSSWNSMILGLATNGFED 335
Score = 65.5 bits (158), Expect = 3e-10
Identities = 35/115 (30%), Positives = 60/115 (52%), Gaps = 1/115 (0%)
Frame = +2
Query: 5 SWNSMISGFVRNGKWIEALDLFCEM-QDMKIRPSEFTLVSTLNACAKLGALGQGKWIHDY 181
+WN++I GF + A+ LF EM + +++P T S A + G G +H
Sbjct: 86 TWNTIIRGFSESSTPQYAIHLFIEMLNNSQVQPHLLTYPSVFKAYGRGGIAKNGAQLHGR 145
Query: 182 IKKNNIEMNVIVVTAIIDMYCKCGNIETARHVYETAPRKGLSSWNSMMLGLATNG 346
I K +E + + ++ MY CG + AR +++ + + SWNSM++GLA +G
Sbjct: 146 IMKLGLEFDTFIRNTLLYMYASCGFLVEARKLFDEDEIEDVVSWNSMIIGLAKSG 200
>ref|XP_008229420.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic-like [Prunus mume]
Length = 369
Score = 179 bits (455), Expect = 2e-53
Identities = 83/116 (71%), Positives = 99/116 (85%)
Frame = +2
Query: 5 SWNSMISGFVRNGKWIEALDLFCEMQDMKIRPSEFTLVSTLNACAKLGALGQGKWIHDYI 184
SWNSMISGFVRNGK+ EALDLF EMQ +++PSEFT+VS LNA A+LGA+GQG+WIH+YI
Sbjct: 56 SWNSMISGFVRNGKYTEALDLFSEMQKKRVKPSEFTMVSLLNASAQLGAIGQGEWIHEYI 115
Query: 185 KKNNIEMNVIVVTAIIDMYCKCGNIETARHVYETAPRKGLSSWNSMMLGLATNGFE 352
KKN +EMN IV+TAII+MYCKCG+IE A V+E PRKGLS WNS ++GLA NG E
Sbjct: 116 KKNGVEMNAIVITAIINMYCKCGSIEEAIRVFEANPRKGLSCWNSTIMGLAINGCE 171
>ref|XP_007048864.1| Pentatricopeptide repeat (PPR-like) superfamily protein [Theobroma
cacao] gi|508701125|gb|EOX93021.1| Pentatricopeptide
repeat (PPR-like) superfamily protein [Theobroma cacao]
Length = 538
Score = 181 bits (460), Expect = 1e-52
Identities = 86/117 (73%), Positives = 100/117 (85%)
Frame = +2
Query: 5 SWNSMISGFVRNGKWIEALDLFCEMQDMKIRPSEFTLVSTLNACAKLGALGQGKWIHDYI 184
SWNSMISG+VRNG+++EAL+LF EMQ+ IRPSEFT+VS LNACA LGA+ QGKWIHDYI
Sbjct: 222 SWNSMISGYVRNGRFLEALELFQEMQEEHIRPSEFTMVSLLNACACLGAITQGKWIHDYI 281
Query: 185 KKNNIEMNVIVVTAIIDMYCKCGNIETARHVYETAPRKGLSSWNSMMLGLATNGFEN 355
K N E+N IVVTAIIDMYCKCGN E A V+ T+P++GLS WNSM+LGLATNG EN
Sbjct: 282 LKQNFELNGIVVTAIIDMYCKCGNAEKALQVFTTSPKEGLSCWNSMILGLATNGCEN 338
Score = 60.1 bits (144), Expect = 3e-08
Identities = 36/116 (31%), Positives = 59/116 (50%), Gaps = 2/116 (1%)
Frame = +2
Query: 5 SWNSMISGFVRNGKWIEALDLFCEMQ-DMKIRPSEFTLVSTLNACAKLGALGQGKWIHDY 181
+WN++I GF ++ A+ LF +M I+P T S A A+LG G+ +H
Sbjct: 88 TWNTIIRGFSQSSNPQIAISLFIDMLVGSSIQPERLTYPSVFKAYAQLGLACDGRQLHGR 147
Query: 182 IKKNNIEMNVIVVTAIIDMYCKCGNIETARHVY-ETAPRKGLSSWNSMMLGLATNG 346
+ K ++ + + II MY CG + A ++ E + +WNSM++GLA G
Sbjct: 148 VIKLGLDYDQFIRNTIIYMYANCGLLSEAWRMFDEEHMELDIVAWNSMIIGLAKCG 203
>ref|XP_008229419.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic-like [Prunus mume]
Length = 533
Score = 179 bits (455), Expect = 7e-52
Identities = 83/116 (71%), Positives = 99/116 (85%)
Frame = +2
Query: 5 SWNSMISGFVRNGKWIEALDLFCEMQDMKIRPSEFTLVSTLNACAKLGALGQGKWIHDYI 184
SWNSMISGFVRNGK+ EALDLF EMQ +++PSEFT+VS LNA A+LGA+GQG+WIH+YI
Sbjct: 220 SWNSMISGFVRNGKYTEALDLFSEMQKKRVKPSEFTMVSLLNASAQLGAIGQGEWIHEYI 279
Query: 185 KKNNIEMNVIVVTAIIDMYCKCGNIETARHVYETAPRKGLSSWNSMMLGLATNGFE 352
KKN +EMN IV+TAII+MYCKCG+IE A V+E PRKGLS WNS ++GLA NG E
Sbjct: 280 KKNGVEMNAIVITAIINMYCKCGSIEEAIRVFEANPRKGLSCWNSTIMGLAINGCE 335
Score = 60.5 bits (145), Expect = 2e-08
Identities = 35/109 (32%), Positives = 52/109 (47%), Gaps = 1/109 (0%)
Frame = +2
Query: 8 WNSMISGFVRNGKWIEALDLFCEMQ-DMKIRPSEFTLVSTLNACAKLGALGQGKWIHDYI 184
WN++I GF + A+ LF +M I P T S A A+LG G +H I
Sbjct: 88 WNTIIRGFSESPTPETAISLFIDMLVTSAIEPQRLTYPSVFKAYAQLGLAHDGAQLHGRI 147
Query: 185 KKNNIEMNVIVVTAIIDMYCKCGNIETARHVYETAPRKGLSSWNSMMLG 331
K +E + + II MY CG + AR +++ +WNSM++G
Sbjct: 148 IKLGLESDQFIRNTIIHMYANCGFLSEARRLFDEDLECDTVAWNSMIMG 196
>ref|XP_012489426.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic [Gossypium raimondii]
gi|763773462|gb|KJB40585.1| hypothetical protein
B456_007G070100 [Gossypium raimondii]
Length = 535
Score = 176 bits (446), Expect = 1e-50
Identities = 81/116 (69%), Positives = 97/116 (83%)
Frame = +2
Query: 5 SWNSMISGFVRNGKWIEALDLFCEMQDMKIRPSEFTLVSTLNACAKLGALGQGKWIHDYI 184
SWNSMISG+VRNGK++EALDLF EMQ +RPSEFT+VS LNACA LGA+ QGKW+HDY+
Sbjct: 222 SWNSMISGYVRNGKFLEALDLFQEMQGENVRPSEFTMVSLLNACACLGAITQGKWVHDYV 281
Query: 185 KKNNIEMNVIVVTAIIDMYCKCGNIETARHVYETAPRKGLSSWNSMMLGLATNGFE 352
N E+NVI+VTAIIDMYCKCG++E A V+ T P+ GLS WN+M+LGLATNG E
Sbjct: 282 LSQNFELNVILVTAIIDMYCKCGDVEKALQVFRTYPKGGLSCWNAMILGLATNGCE 337
Score = 59.7 bits (143), Expect = 4e-08
Identities = 34/116 (29%), Positives = 57/116 (49%), Gaps = 2/116 (1%)
Frame = +2
Query: 5 SWNSMISGFVRNGKWIEALDLFCEMQDMK-IRPSEFTLVSTLNACAKLGALGQGKWIHDY 181
+WN +I GF R+ A+ LF +M + P T S A A+LG G+ +H
Sbjct: 88 AWNVIIRGFSRSSNPQIAISLFIDMLVYSSVEPGRLTYPSVFKAYAQLGLASDGRQLHGR 147
Query: 182 IKKNNIEMNVIVVTAIIDMYCKCGNIETARHVY-ETAPRKGLSSWNSMMLGLATNG 346
+ K ++ + + ++ MY CG + A ++ E + +WNSM++GLA G
Sbjct: 148 VIKQGLDCDQFIRNTMVYMYANCGLLSEAWRMFDEEEMELDVVAWNSMVMGLAKCG 203
>ref|XP_015880153.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic [Ziziphus jujuba]
Length = 525
Score = 176 bits (445), Expect = 2e-50
Identities = 81/116 (69%), Positives = 99/116 (85%)
Frame = +2
Query: 5 SWNSMISGFVRNGKWIEALDLFCEMQDMKIRPSEFTLVSTLNACAKLGALGQGKWIHDYI 184
SWNSMISG+VRNG +IEAL+LF +MQ+ +I+PSE+T+VS LNAC LGA+ QGKWIHDYI
Sbjct: 221 SWNSMISGYVRNGMFIEALELFGKMQEERIKPSEYTMVSLLNACGSLGAIRQGKWIHDYI 280
Query: 185 KKNNIEMNVIVVTAIIDMYCKCGNIETARHVYETAPRKGLSSWNSMMLGLATNGFE 352
+KN IE+NV+ +TAIIDMYCKCG+I A V+ETA +KGLS WNSM+LGLA NG E
Sbjct: 281 RKNGIELNVLAITAIIDMYCKCGSINEALDVFETATQKGLSCWNSMILGLAMNGCE 336
Score = 62.4 bits (150), Expect = 4e-09
Identities = 36/114 (31%), Positives = 58/114 (50%), Gaps = 1/114 (0%)
Frame = +2
Query: 8 WNSMISGFVRNGKWIEALDLFCEMQ-DMKIRPSEFTLVSTLNACAKLGALGQGKWIHDYI 184
WN++I GF ++ A+ LF +M I+P T S A ++LG G +H +
Sbjct: 89 WNTIIRGFSQSSSPQIAISLFIDMLVTSPIQPQRLTYPSVFKAYSQLGQACYGAQLHGRV 148
Query: 185 KKNNIEMNVIVVTAIIDMYCKCGNIETARHVYETAPRKGLSSWNSMMLGLATNG 346
K +E + + II MY CG + AR V++ + +WNSM++GL+ G
Sbjct: 149 IKLGLECDPFIRNTIIYMYANCGFLSEARLVFDEDLEYDVVAWNSMIMGLSKCG 202
Score = 57.8 bits (138), Expect = 2e-07
Identities = 33/115 (28%), Positives = 54/115 (46%), Gaps = 2/115 (1%)
Frame = +2
Query: 8 WNSMISGFVRNGKWIEALDLFCEMQDMKIRPSEFTLVSTLNACAKLGALGQGKWIHDYIK 187
WNSMI G NG EA +LF ++ + P E + + L AC G + + K +K
Sbjct: 323 WNSMILGLAMNGCEEEATELFSRLESSNLTPDEVSFIGVLTACKHTGMVDKAKDYFSIMK 382
Query: 188 K-NNIEMNVIVVTAIIDMYCKCGNIETARHVYETAP-RKGLSSWNSMMLGLATNG 346
+ I ++ + I+D+ + G +E A H+ ET P W S++ +G
Sbjct: 383 ELYKINPSIRHYSCIVDVLGQAGRLEEAEHLIETMPINPDAIIWGSLLSACKKHG 437
>ref|XP_008380208.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic-like [Malus domestica]
Length = 533
Score = 175 bits (443), Expect = 4e-50
Identities = 83/116 (71%), Positives = 97/116 (83%)
Frame = +2
Query: 5 SWNSMISGFVRNGKWIEALDLFCEMQDMKIRPSEFTLVSTLNACAKLGALGQGKWIHDYI 184
SWNSM SGFVRNGK+ EAL+ F EMQ +IRPSEFT+VS LNA A+LGA+GQG+WIH+YI
Sbjct: 220 SWNSMTSGFVRNGKYAEALEFFGEMQKERIRPSEFTMVSLLNASAQLGAIGQGEWIHEYI 279
Query: 185 KKNNIEMNVIVVTAIIDMYCKCGNIETARHVYETAPRKGLSSWNSMMLGLATNGFE 352
KKN IEMN IVVTAI +MYCKCG+IE A V+E AP KGLS WN+M++GLA NG E
Sbjct: 280 KKNGIEMNGIVVTAITNMYCKCGSIEKALRVFEAAPNKGLSCWNTMIMGLAVNGCE 335
Score = 60.1 bits (144), Expect = 3e-08
Identities = 35/110 (31%), Positives = 54/110 (49%), Gaps = 1/110 (0%)
Frame = +2
Query: 8 WNSMISGFVRNGKWIEALDLFCEMQ-DMKIRPSEFTLVSTLNACAKLGALGQGKWIHDYI 184
WN++I GF + A+ LF EM +I P T S A +++G G +H +
Sbjct: 88 WNTIIRGFSESQNPKTAVSLFIEMLVASEIEPQRLTYPSVFKAYSQVGLAKDGAQLHGRV 147
Query: 185 KKNNIEMNVIVVTAIIDMYCKCGNIETARHVYETAPRKGLSSWNSMMLGL 334
K +E + AII MY CG + AR +++ +WNSM++GL
Sbjct: 148 IKLGLESDEFTRNAIIHMYANCGFLSDARKLFDEDLECDNVAWNSMIMGL 197
>ref|XP_002279693.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic [Vitis vinifera]
gi|302143555|emb|CBI22116.3| unnamed protein product
[Vitis vinifera]
Length = 533
Score = 174 bits (442), Expect = 5e-50
Identities = 83/117 (70%), Positives = 99/117 (84%)
Frame = +2
Query: 5 SWNSMISGFVRNGKWIEALDLFCEMQDMKIRPSEFTLVSTLNACAKLGALGQGKWIHDYI 184
SWNSMISG+VRNG+ EALDLF +MQ+ +I+PSEFT+VS LNA A+LGAL QG+WIHDYI
Sbjct: 224 SWNSMISGYVRNGRLREALDLFGQMQEERIKPSEFTMVSLLNASARLGALKQGEWIHDYI 283
Query: 185 KKNNIEMNVIVVTAIIDMYCKCGNIETARHVYETAPRKGLSSWNSMMLGLATNGFEN 355
+KNN E+NVIV +IIDMYCKCG+I A V+E AP KGLSSWN+M+LGLA NG EN
Sbjct: 284 RKNNFELNVIVTASIIDMYCKCGSIGEAFQVFEMAPLKGLSSWNTMILGLAMNGCEN 340
Score = 58.9 bits (141), Expect = 7e-08
Identities = 34/115 (29%), Positives = 56/115 (48%), Gaps = 1/115 (0%)
Frame = +2
Query: 5 SWNSMISGFVRNGKWIEALDLFCEMQDMK-IRPSEFTLVSTLNACAKLGALGQGKWIHDY 181
SWN++I GF ++ A+ LF +M + ++P T S A A+LG G +H
Sbjct: 91 SWNTIIRGFSQSSTPHHAISLFIDMLIVSSVQPHRLTYPSVFKAYAQLGLAHYGAQLHGR 150
Query: 182 IKKNNIEMNVIVVTAIIDMYCKCGNIETARHVYETAPRKGLSSWNSMMLGLATNG 346
+ K ++ + + II MY CG + + + +WNSM++GLA G
Sbjct: 151 VIKLGLQFDPFIRNTIIYMYANCGFLSEMWKAFYERMDFDIVAWNSMIMGLAKCG 205
Score = 53.1 bits (126), Expect = 7e-06
Identities = 32/117 (27%), Positives = 54/117 (46%), Gaps = 2/117 (1%)
Frame = +2
Query: 2 TSWNSMISGFVRNGKWIEALDLFCEMQDMKIRPSEFTLVSTLNACAKLGALGQGKWIHDY 181
+SWN+MI G NG EA+ LF ++ +RP + T V L AC G + + K
Sbjct: 324 SSWNTMILGLAMNGCENEAIQLFSRLECSNLRPDDVTFVGVLTACNYSGLVDKAKEYFSL 383
Query: 182 IKKN-NIEMNVIVVTAIIDMYCKCGNIETARHVYETAP-RKGLSSWNSMMLGLATNG 346
+ K IE ++ + ++D + G +E A + P W+S++ +G
Sbjct: 384 MSKTYKIEPSIKHYSCMVDTLGRAGLLEEAEELIRNMPVNPDAIIWSSLLSACRKHG 440
>ref|XP_009356621.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic-like [Pyrus x bretschneideri]
Length = 533
Score = 172 bits (437), Expect = 3e-49
Identities = 83/116 (71%), Positives = 97/116 (83%)
Frame = +2
Query: 5 SWNSMISGFVRNGKWIEALDLFCEMQDMKIRPSEFTLVSTLNACAKLGALGQGKWIHDYI 184
SWNSM SGFVRNG + EAL+LF EMQ +IRPSEFT+VS LNA A+LGA+GQG+WIH+YI
Sbjct: 220 SWNSMTSGFVRNGMYAEALELFGEMQKERIRPSEFTMVSLLNASAQLGAIGQGEWIHEYI 279
Query: 185 KKNNIEMNVIVVTAIIDMYCKCGNIETARHVYETAPRKGLSSWNSMMLGLATNGFE 352
KKN IEMN IVVTAII+MYCKCG+IE A V+E AP K LS WN+M++GLA NG E
Sbjct: 280 KKNGIEMNGIVVTAIINMYCKCGSIEKALRVFEAAPNKVLSCWNTMIMGLAVNGCE 335
Score = 59.7 bits (143), Expect = 4e-08
Identities = 35/114 (30%), Positives = 55/114 (48%), Gaps = 1/114 (0%)
Frame = +2
Query: 8 WNSMISGFVRNGKWIEALDLFCEMQ-DMKIRPSEFTLVSTLNACAKLGALGQGKWIHDYI 184
WN++I GF + A+ LF EM +I P T S A +++G G +H +
Sbjct: 88 WNTIIRGFSESQNPKTAISLFIEMLVASEIEPQRLTYPSVFKAYSQVGLAEDGAQLHGRV 147
Query: 185 KKNNIEMNVIVVTAIIDMYCKCGNIETARHVYETAPRKGLSSWNSMMLGLATNG 346
K +E + II MY CG + AR +++ +WNSM++GL+ G
Sbjct: 148 IKLGLEGDEFTRNTIIHMYANCGFLSEARKLFDEDLECDSVAWNSMIMGLSKCG 201
>emb|CDP06172.1| unnamed protein product [Coffea canephora]
Length = 526
Score = 171 bits (432), Expect = 1e-48
Identities = 82/117 (70%), Positives = 97/117 (82%), Gaps = 1/117 (0%)
Frame = +2
Query: 5 SWNSMISGFVRNGKWIEALDLFCEMQDMKIRPSEFTLVSTLNACAKLGALGQGKWIHDY- 181
SWNSMISGFV+NGKW+EALDLF EMQ+ + PSE+TLVS LNA A LGAL QGKWIH+Y
Sbjct: 222 SWNSMISGFVKNGKWMEALDLFGEMQEQSVEPSEYTLVSLLNASAFLGALDQGKWIHEYM 281
Query: 182 IKKNNIEMNVIVVTAIIDMYCKCGNIETARHVYETAPRKGLSSWNSMMLGLATNGFE 352
+KK +I+ N IV+TA+I+MY KCG+IE AR V+ETAP KGLS WNSM+ GL NGFE
Sbjct: 282 MKKTSIKKNAIVITALINMYHKCGDIEMARQVFETAPGKGLSCWNSMIFGLGINGFE 338
Score = 65.1 bits (157), Expect = 5e-10
Identities = 34/115 (29%), Positives = 59/115 (51%), Gaps = 1/115 (0%)
Frame = +2
Query: 5 SWNSMISGFVRNGKWIEALDLFCEMQDMK-IRPSEFTLVSTLNACAKLGALGQGKWIHDY 181
+WN+MI GF ++ +L LF +M + ++P T S A +LG +G +H
Sbjct: 89 TWNTMIRGFSQSSSPETSLSLFVQMLESSLVQPERLTYPSVFKAYTQLGLAAEGAQLHGR 148
Query: 182 IKKNNIEMNVIVVTAIIDMYCKCGNIETARHVYETAPRKGLSSWNSMMLGLATNG 346
I K + + + +++MY CG + AR +++ + +WNSM+ GLA G
Sbjct: 149 IVKLGLVFDPFIRNTMLNMYANCGCLNEARKLFDEDEIVDVVAWNSMISGLAKYG 203
>ref|XP_003617444.1| PPR containing plant-like protein [Medicago truncatula]
gi|355518779|gb|AET00403.1| PPR containing plant-like
protein [Medicago truncatula]
Length = 542
Score = 171 bits (432), Expect = 2e-48
Identities = 80/116 (68%), Positives = 96/116 (82%)
Frame = +2
Query: 5 SWNSMISGFVRNGKWIEALDLFCEMQDMKIRPSEFTLVSTLNACAKLGALGQGKWIHDYI 184
SWNSMISG+VRNGK +EAL+LF +MQ SEFT+VS LNACA LGAL GKW+HDYI
Sbjct: 230 SWNSMISGYVRNGKLMEALELFNKMQVEGFEVSEFTMVSLLNACAHLGALQHGKWVHDYI 289
Query: 185 KKNNIEMNVIVVTAIIDMYCKCGNIETARHVYETAPRKGLSSWNSMMLGLATNGFE 352
K+N+ E+NVIVVTAIIDMYCKCG++E A V+ET PR+GLS WNS+++GLA NG E
Sbjct: 290 KRNHFELNVIVVTAIIDMYCKCGSVENAVEVFETCPRRGLSCWNSIIIGLAMNGHE 345
Score = 54.3 bits (129), Expect = 3e-06
Identities = 37/149 (24%), Positives = 62/149 (41%), Gaps = 35/149 (23%)
Frame = +2
Query: 5 SWNSMISGFVRNGKWIEALDLFCEMQDMKIRPSEFTLVSTLNACAKLGALGQGKWIHDYI 184
SWN++I F R+ A+ LF +M +I+P T S A A+LG G +H +
Sbjct: 94 SWNTIIRAFSRSSTPQFAISLFVDMLYSQIQPQYLTYPSVFKAYAQLGHAHYGAQLHGRV 153
Query: 185 KKNNI-----------------------------------EMNVIVVTAIIDMYCKCGNI 259
K + + +V+ + ++I Y KCG I
Sbjct: 154 VKLGLQNDQFICNTIIYMYANGGLMSEARRVFDGKKLELYDHDVVAINSMIMGYAKCGEI 213
Query: 260 ETARHVYETAPRKGLSSWNSMMLGLATNG 346
+ +R++++ + SWNSM+ G NG
Sbjct: 214 DESRNLFDDMITRTSVSWNSMISGYVRNG 242
Score = 53.1 bits (126), Expect = 7e-06
Identities = 31/109 (28%), Positives = 55/109 (50%), Gaps = 3/109 (2%)
Frame = +2
Query: 8 WNSMISGFVRNGKWIEALDLFCEMQDMKI-RPSEFTLVSTLNACAKLGALGQGK-WIHDY 181
WNS+I G NG EA + F +++ K+ +P + + L AC LGA+ + + +
Sbjct: 332 WNSIIIGLAMNGHEREAFEFFSKLESSKLLKPDSVSFIGVLTACKHLGAINKARDYFELM 391
Query: 182 IKKNNIEMNVIVVTAIIDMYCKCGNIETARHVYETAPRK-GLSSWNSMM 325
+ K IE ++ T I+D+ + G +E A + + P K W S++
Sbjct: 392 MNKYEIEPSIKHYTCIVDVLGQAGLLEEAEELIKGMPLKPDAIIWGSLL 440