BLASTX nr result
ID: Rehmannia28_contig00010674
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia28_contig00010674
(727 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EPS74529.1| hypothetical protein M569_00246 [Genlisea aurea] 152 2e-44
emb|CAN66877.1| hypothetical protein VITISV_009278 [Vitis vinifera] 119 3e-30
ref|XP_002863224.1| hypothetical protein ARALYDRAFT_497141 [Arab... 116 4e-29
prf||1211235DD NADH dehydrogenase 2-like ORF 180 112 3e-27
gb|KMT11518.1| hypothetical protein BVRB_5g108370 [Beta vulgaris... 107 2e-26
ref|YP_009123570.1| NADH-plastoquinone oxidoreductase subunit 2 ... 112 5e-26
gb|AHY80585.1| NADH-plastoquinone oxidoreductase subunit 2 (plas... 107 2e-24
gb|EPS74510.1| hypothetical protein M569_00227, partial [Genlise... 103 4e-24
gb|ERN00556.1| hypothetical protein AMTR_s00102p00105080 [Ambore... 97 1e-21
gb|KRH76185.1| hypothetical protein GLYMA_01G137800 [Glycine max] 89 2e-19
ref|YP_009107036.1| NADH-plastoquinone oxidoreductase subunit 2 ... 95 8e-19
gb|KJB63332.1| hypothetical protein B456_010G216900 [Gossypium r... 85 3e-18
ref|YP_009235584.1| NdhB (chloroplast) [Cynanchum wilfordii] gi|... 91 1e-17
gb|AGQ50376.1| NADH-plastoquinone oxidoreductase subunit 2 (chlo... 91 1e-17
ref|XP_003591523.1| NADH-quinone oxidoreductase protein [Medicag... 85 5e-17
gb|AHH80693.1| NADH-plastoquinone oxidoreductase subunit 2 [Goss... 89 1e-16
ref|YP_008592685.1| NADH-plastoquinone oxidoreductase subunit 2 ... 87 3e-16
gb|AKZ21965.1| NADH dehydrogenase subunit 2 (plastid) [Asclepias... 87 4e-16
ref|YP_817527.1| NADH-plastoquinone oxidoreductase subunit 2 [Co... 87 4e-16
ref|YP_009154455.1| NADH dehydrogenase subunit 2 (chloroplast) [... 86 7e-16
>gb|EPS74529.1| hypothetical protein M569_00246 [Genlisea aurea]
Length = 74
Score = 152 bits (384), Expect = 2e-44
Identities = 70/74 (94%), Positives = 73/74 (98%)
Frame = +2
Query: 296 MLHSWFSSFRDYECNRSIRRQKDHPKMIISWLLRTN*IRWFYFSIFLTCSYGTKVEKIEK 475
MLHSWFSSFRDYECNRSIRRQ+DHPKM++SWLLRTN IRWFYFSIFLTCSYGTKVEKIEK
Sbjct: 1 MLHSWFSSFRDYECNRSIRRQRDHPKMLMSWLLRTNEIRWFYFSIFLTCSYGTKVEKIEK 60
Query: 476 ISHSQPLMKDSSKS 517
ISHSQPLMKDSSKS
Sbjct: 61 ISHSQPLMKDSSKS 74
>emb|CAN66877.1| hypothetical protein VITISV_009278 [Vitis vinifera]
Length = 158
Score = 119 bits (297), Expect = 3e-30
Identities = 53/54 (98%), Positives = 53/54 (98%)
Frame = +2
Query: 2 GLLTYTKECGSFDKFLPLYLSLRCLDFSKLHGHAEEKCYPHSDQDRTFTCSNNN 163
GLLTYTKECGSFDKFLPLYLSLRCLDFSKLHGHAEEKCYPHSDQD TFTCSNNN
Sbjct: 105 GLLTYTKECGSFDKFLPLYLSLRCLDFSKLHGHAEEKCYPHSDQDITFTCSNNN 158
>ref|XP_002863224.1| hypothetical protein ARALYDRAFT_497141 [Arabidopsis lyrata subsp.
lyrata] gi|297309058|gb|EFH39483.1| hypothetical protein
ARALYDRAFT_497141 [Arabidopsis lyrata subsp. lyrata]
Length = 440
Score = 116 bits (291), Expect(2) = 4e-29
Identities = 53/56 (94%), Positives = 54/56 (96%)
Frame = +2
Query: 308 WFSSFRDYECNRSIRRQKDHPKMIISWLLRTN*IRWFYFSIFLTCSYGTKVEKIEK 475
WFSSFRDYECNRSIRRQKDHPKMIISWLLRTN IRWF+FSIF TCSYGTKVEKIEK
Sbjct: 139 WFSSFRDYECNRSIRRQKDHPKMIISWLLRTNQIRWFHFSIFRTCSYGTKVEKIEK 194
Score = 39.7 bits (91), Expect(2) = 4e-29
Identities = 18/18 (100%), Positives = 18/18 (100%)
Frame = +1
Query: 472 KNQSFTTTDEGFLEKLRI 525
KNQSFTTTDEGFLEKLRI
Sbjct: 194 KNQSFTTTDEGFLEKLRI 211
>prf||1211235DD NADH dehydrogenase 2-like ORF 180
Length = 180
Score = 112 bits (279), Expect = 3e-27
Identities = 51/52 (98%), Positives = 51/52 (98%)
Frame = +1
Query: 1 WTPDVYEGVRFVR*IPTSLSISEMFGFFKTPWTCRREMLSPLGPRQNFYLFK 156
WTPDVYEGVRFVR IPTSLSISEMFGFFKTPWTCRREMLSPLGPRQNFYLFK
Sbjct: 129 WTPDVYEGVRFVREIPTSLSISEMFGFFKTPWTCRREMLSPLGPRQNFYLFK 180
>gb|KMT11518.1| hypothetical protein BVRB_5g108370 [Beta vulgaris subsp. vulgaris]
Length = 118
Score = 107 bits (268), Expect = 2e-26
Identities = 49/52 (94%), Positives = 49/52 (94%)
Frame = +1
Query: 1 WTPDVYEGVRFVR*IPTSLSISEMFGFFKTPWTCRREMLSPLGPRQNFYLFK 156
WTPDVYEGVRFVR IPTSLSISEMFGFFKTPWTCRREML PLGPR NFYLFK
Sbjct: 67 WTPDVYEGVRFVREIPTSLSISEMFGFFKTPWTCRREMLFPLGPRHNFYLFK 118
>ref|YP_009123570.1| NADH-plastoquinone oxidoreductase subunit 2 (plastid) [Physalis
peruviana] gi|814072015|ref|YP_009123586.1|
NADH-plastoquinone oxidoreductase subunit 2 (plastid)
[Physalis peruviana] gi|757173536|gb|AJN90351.1|
NADH-plastoquinone oxidoreductase subunit 2 [Physalis
peruviana] gi|757173552|gb|AJN90367.1|
NADH-plastoquinone oxidoreductase subunit 2 [Physalis
peruviana] gi|766544129|gb|AJS14380.1|
NADH-plastoquinone oxidoreductase subunit 2
(chloroplast) [Iochroma calycinum]
Length = 303
Score = 112 bits (279), Expect = 5e-26
Identities = 51/52 (98%), Positives = 51/52 (98%)
Frame = +1
Query: 1 WTPDVYEGVRFVR*IPTSLSISEMFGFFKTPWTCRREMLSPLGPRQNFYLFK 156
WTPDVYEGVRFVR IPTSLSISEMFGFFKTPWTCRREMLSPLGPRQNFYLFK
Sbjct: 252 WTPDVYEGVRFVREIPTSLSISEMFGFFKTPWTCRREMLSPLGPRQNFYLFK 303
>gb|AHY80585.1| NADH-plastoquinone oxidoreductase subunit 2 (plastid) [Beta
vulgaris subsp. vulgaris]
Length = 303
Score = 107 bits (268), Expect = 2e-24
Identities = 49/52 (94%), Positives = 49/52 (94%)
Frame = +1
Query: 1 WTPDVYEGVRFVR*IPTSLSISEMFGFFKTPWTCRREMLSPLGPRQNFYLFK 156
WTPDVYEGVRFVR IPTSLSISEMFGFFKTPWTCRREML PLGPR NFYLFK
Sbjct: 252 WTPDVYEGVRFVREIPTSLSISEMFGFFKTPWTCRREMLFPLGPRHNFYLFK 303
>gb|EPS74510.1| hypothetical protein M569_00227, partial [Genlisea aurea]
Length = 170
Score = 103 bits (257), Expect = 4e-24
Identities = 48/52 (92%), Positives = 48/52 (92%)
Frame = +1
Query: 1 WTPDVYEGVRFVR*IPTSLSISEMFGFFKTPWTCRREMLSPLGPRQNFYLFK 156
W PDVYEGVRFVR IPTSLSISEMFGFFKTPWTCR EMLSPLGPRQNF LFK
Sbjct: 119 WIPDVYEGVRFVREIPTSLSISEMFGFFKTPWTCRGEMLSPLGPRQNFELFK 170
>gb|ERN00556.1| hypothetical protein AMTR_s00102p00105080 [Amborella trichopoda]
Length = 183
Score = 97.4 bits (241), Expect = 1e-21
Identities = 45/51 (88%), Positives = 47/51 (92%), Gaps = 2/51 (3%)
Frame = +1
Query: 1 WTPDVYEGVRFVR*IPTSLSIS--EMFGFFKTPWTCRREMLSPLGPRQNFY 147
WTPDVYEGVRFVR IPTS+SIS +MFGFFKTPWTCRREMLSPLGPR NFY
Sbjct: 129 WTPDVYEGVRFVRQIPTSISISISQMFGFFKTPWTCRREMLSPLGPRHNFY 179
>gb|KRH76185.1| hypothetical protein GLYMA_01G137800 [Glycine max]
Length = 71
Score = 88.6 bits (218), Expect = 2e-19
Identities = 40/47 (85%), Positives = 41/47 (87%)
Frame = +2
Query: 2 GLLTYTKECGSFDKFLPLYLSLRCLDFSKLHGHAEEKCYPHSDQDRT 142
GLLTY KECGSF+KFL LYL LRCLDFSKLHGH EEKCY HSDQD T
Sbjct: 15 GLLTYKKECGSFNKFLSLYLFLRCLDFSKLHGHVEEKCYSHSDQDIT 61
>ref|YP_009107036.1| NADH-plastoquinone oxidoreductase subunit 2 (chloroplast) [Sapindus
mukorossi] gi|698352431|gb|AIT96782.1|
NADH-plastoquinone oxidoreductase subunit 2
(chloroplast) [Sapindus mukorossi]
Length = 541
Score = 94.7 bits (234), Expect = 8e-19
Identities = 46/76 (60%), Positives = 53/76 (69%)
Frame = +1
Query: 1 WTPDVYEGVRFVR*IPTSLSISEMFGFFKTPWTCRREMLSPLGPRQNFYLFK*QLR*SRV 180
WTPDVYEGVRFVR IPTSLSISEMFGFFKTPWTCRREMLSPL P + + +
Sbjct: 252 WTPDVYEGVRFVRKIPTSLSISEMFGFFKTPWTCRREMLSPLSPTPVVAFLSVTSKVAAL 311
Query: 181 RNDESLYDKQIYFGSS 228
+ ++D YF S+
Sbjct: 312 ASATRIFDIPFYFSSN 327
>gb|KJB63332.1| hypothetical protein B456_010G216900 [Gossypium raimondii]
Length = 67
Score = 85.1 bits (209), Expect = 3e-18
Identities = 46/67 (68%), Positives = 48/67 (71%)
Frame = +2
Query: 374 MIISWLLRTN*IRWFYFSIFLTCSYGTKVEKIEKISHSQPLMKDSSKS*GLVIFFRNRMD 553
MIISWLLRTN IRWFYFSIFLTCSY TKVEKIEK + K LVI FRNRM
Sbjct: 1 MIISWLLRTNQIRWFYFSIFLTCSYKTKVEKIEKNQSFTTTDEGFLKKLRLVIRFRNRMS 60
Query: 554 SVLYIRE 574
S+LYI E
Sbjct: 61 SILYICE 67
>ref|YP_009235584.1| NdhB (chloroplast) [Cynanchum wilfordii]
gi|985701327|gb|AMD38425.1| NdhB (chloroplast)
[Cynanchum wilfordii]
Length = 544
Score = 91.3 bits (225), Expect = 1e-17
Identities = 41/44 (93%), Positives = 42/44 (95%)
Frame = +1
Query: 1 WTPDVYEGVRFVR*IPTSLSISEMFGFFKTPWTCRREMLSPLGP 132
WTPDVYEGVRFVR IPTSLSIS+MFGFFKTPWTCRREMLSPL P
Sbjct: 252 WTPDVYEGVRFVREIPTSLSISKMFGFFKTPWTCRREMLSPLSP 295
>gb|AGQ50376.1| NADH-plastoquinone oxidoreductase subunit 2 (chloroplast) [Rumex
acetosa] gi|523582329|gb|AGQ50382.1| NADH-plastoquinone
oxidoreductase subunit 2 (chloroplast) [Rumex acetosa]
Length = 544
Score = 91.3 bits (225), Expect = 1e-17
Identities = 45/76 (59%), Positives = 51/76 (67%)
Frame = +1
Query: 1 WTPDVYEGVRFVR*IPTSLSISEMFGFFKTPWTCRREMLSPLGPRQNFYLFK*QLR*SRV 180
WTPDVYEGVRFVR IP SLSISEMFGFFKTPWTCRREMLSPL P + +
Sbjct: 252 WTPDVYEGVRFVRKIPRSLSISEMFGFFKTPWTCRREMLSPLSPTPVVAFLSVTSKVAAS 311
Query: 181 RNDESLYDKQIYFGSS 228
+ ++D YF S+
Sbjct: 312 ASATRIFDIPFYFSSN 327
>ref|XP_003591523.1| NADH-quinone oxidoreductase protein [Medicago truncatula]
gi|355480571|gb|AES61774.1| NADH-quinone oxidoreductase
protein [Medicago truncatula]
Length = 172
Score = 85.1 bits (209), Expect = 5e-17
Identities = 39/43 (90%), Positives = 40/43 (93%)
Frame = +1
Query: 1 WTPDVYEGVRFVR*IPTSLSISEMFGFFKTPWTCRREMLSPLG 129
WTPDVYEGVRFVR IPTSLSISEMFGFFKT WTCRR+ML PLG
Sbjct: 129 WTPDVYEGVRFVREIPTSLSISEMFGFFKTLWTCRRDMLFPLG 171
>gb|AHH80693.1| NADH-plastoquinone oxidoreductase subunit 2 [Gossypium laxum]
Length = 541
Score = 88.6 bits (218), Expect = 1e-16
Identities = 40/41 (97%), Positives = 40/41 (97%)
Frame = +1
Query: 1 WTPDVYEGVRFVR*IPTSLSISEMFGFFKTPWTCRREMLSP 123
WTPDVYEGVRFVR IPTSLSISEMFGFFKTPWTCRREMLSP
Sbjct: 252 WTPDVYEGVRFVRLIPTSLSISEMFGFFKTPWTCRREMLSP 292
>ref|YP_008592685.1| NADH-plastoquinone oxidoreductase subunit 2 (chloroplast) [Berberis
bealei] gi|536462726|gb|AGU37091.1| NADH-plastoquinone
oxidoreductase subunit 2 (chloroplast) [Berberis bealei]
Length = 545
Score = 87.4 bits (215), Expect = 3e-16
Identities = 39/44 (88%), Positives = 41/44 (93%)
Frame = +1
Query: 1 WTPDVYEGVRFVR*IPTSLSISEMFGFFKTPWTCRREMLSPLGP 132
WTPDVYEGVRFVR IPTS+SISE+FGFFKT WTCRREMLSPL P
Sbjct: 252 WTPDVYEGVRFVREIPTSISISEIFGFFKTSWTCRREMLSPLSP 295
>gb|AKZ21965.1| NADH dehydrogenase subunit 2 (plastid) [Asclepias verticillata]
Length = 541
Score = 87.0 bits (214), Expect = 4e-16
Identities = 39/41 (95%), Positives = 40/41 (97%)
Frame = +1
Query: 1 WTPDVYEGVRFVR*IPTSLSISEMFGFFKTPWTCRREMLSP 123
WTPDVYEGVRFVR IPTSLSIS+MFGFFKTPWTCRREMLSP
Sbjct: 252 WTPDVYEGVRFVREIPTSLSISKMFGFFKTPWTCRREMLSP 292
>ref|YP_817527.1| NADH-plastoquinone oxidoreductase subunit 2 [Coffea arabica]
gi|288561930|sp|P0CC48.1|NU2C1_COFAR RecName:
Full=NAD(P)H-quinone oxidoreductase subunit 2 A,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase,
subunit 2 A; AltName: Full=NADH-plastoquinone
oxidoreductase subunit 2 A gi|116242208|gb|ABJ89723.1|
NADH-plastoquinone oxidoreductase subunit 2 [Coffea
arabica]
Length = 541
Score = 87.0 bits (214), Expect = 4e-16
Identities = 39/41 (95%), Positives = 40/41 (97%)
Frame = +1
Query: 1 WTPDVYEGVRFVR*IPTSLSISEMFGFFKTPWTCRREMLSP 123
WTPDVYEGVRFVR IPTSLSISEMFGFFKTPWTCRRE+LSP
Sbjct: 252 WTPDVYEGVRFVREIPTSLSISEMFGFFKTPWTCRREILSP 292
>ref|YP_009154455.1| NADH dehydrogenase subunit 2 (chloroplast) [Populus tremula]
gi|959122142|ref|YP_009182694.1| NADH dehydrogenase
subunit 2 (chloroplast) [Populus tremula x Populus alba]
gi|768801575|gb|AJV86796.1| NADH dehydrogenase subunit 2
(chloroplast) [Populus tremula]
gi|936227569|gb|ALH07402.1| NADH dehydrogenase subunit 2
(chloroplast) [Populus tremula x Populus alba]
Length = 541
Score = 86.3 bits (212), Expect = 7e-16
Identities = 39/41 (95%), Positives = 39/41 (95%)
Frame = +1
Query: 1 WTPDVYEGVRFVR*IPTSLSISEMFGFFKTPWTCRREMLSP 123
WTPDVYEGVRFVR IPTSLSISEM GFFKTPWTCRREMLSP
Sbjct: 252 WTPDVYEGVRFVRKIPTSLSISEMLGFFKTPWTCRREMLSP 292