BLASTX nr result

ID: Rehmannia28_contig00010559 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00010559
         (337 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011096846.1| PREDICTED: F-box/FBD/LRR-repeat protein At5g...   127   5e-33
ref|XP_011096837.1| PREDICTED: putative F-box/FBD/LRR-repeat pro...   127   7e-33
ref|XP_012854874.1| PREDICTED: putative F-box/LRR-repeat protein...    86   2e-17
ref|XP_012084977.1| PREDICTED: putative FBD-associated F-box pro...    58   1e-07
ref|XP_010694327.1| PREDICTED: F-box/LRR-repeat protein At4g1410...    53   6e-06
ref|XP_010687797.1| PREDICTED: F-box/FBD/LRR-repeat protein At5g...    53   8e-06

>ref|XP_011096846.1| PREDICTED: F-box/FBD/LRR-repeat protein At5g56420-like isoform X2
           [Sesamum indicum]
          Length = 429

 Score =  127 bits (320), Expect = 5e-33
 Identities = 68/105 (64%), Positives = 80/105 (76%)
 Frame = -3

Query: 320 MESKNKKSKRNQEKEEENHXXXXXXXXXXXXXLTHILSFLNTRSAIRTSVLSKRYQLLWT 141
           MESK+KK KRNQE++EE               LTH+LSFL+T+SAIRTSVLSKRY+LLWT
Sbjct: 1   MESKSKKLKRNQERKEER-CDLDKLSCLPDSILTHVLSFLDTKSAIRTSVLSKRYRLLWT 59

Query: 140 LSPCLDFTLSDYHTETSESYDGRVFSQVKNYSVVSFESYVNRVLQ 6
            SPCLDF LS++ T + +SYDG VFSQVKN SV SFESYVN VL+
Sbjct: 60  FSPCLDFKLSEFCTRSLDSYDGYVFSQVKNSSVASFESYVNHVLR 104


>ref|XP_011096837.1| PREDICTED: putative F-box/FBD/LRR-repeat protein At1g78760 isoform
           X1 [Sesamum indicum]
          Length = 452

 Score =  127 bits (320), Expect = 7e-33
 Identities = 68/105 (64%), Positives = 80/105 (76%)
 Frame = -3

Query: 320 MESKNKKSKRNQEKEEENHXXXXXXXXXXXXXLTHILSFLNTRSAIRTSVLSKRYQLLWT 141
           MESK+KK KRNQE++EE               LTH+LSFL+T+SAIRTSVLSKRY+LLWT
Sbjct: 1   MESKSKKLKRNQERKEER-CDLDKLSCLPDSILTHVLSFLDTKSAIRTSVLSKRYRLLWT 59

Query: 140 LSPCLDFTLSDYHTETSESYDGRVFSQVKNYSVVSFESYVNRVLQ 6
            SPCLDF LS++ T + +SYDG VFSQVKN SV SFESYVN VL+
Sbjct: 60  FSPCLDFKLSEFCTRSLDSYDGYVFSQVKNSSVASFESYVNHVLR 104


>ref|XP_012854874.1| PREDICTED: putative F-box/LRR-repeat protein At4g15060 [Erythranthe
           guttata]
          Length = 449

 Score = 85.5 bits (210), Expect = 2e-17
 Identities = 51/107 (47%), Positives = 72/107 (67%), Gaps = 1/107 (0%)
 Frame = -3

Query: 320 MESKNKKSKRNQEKEEENHXXXXXXXXXXXXXLTHILSFLNTRSAIRTSVLSKRYQLLWT 141
           M +KNKKSK+++++E +               L++ILSFL+T+SAIRTS+LSKRY+LLWT
Sbjct: 1   MVAKNKKSKKSKKEEHD----LDKLSCLPDSILSYILSFLDTKSAIRTSLLSKRYKLLWT 56

Query: 140 LSPCLDFTLSDYHTETSESYDGRVFSQ-VKNYSVVSFESYVNRVLQL 3
           L+P LDF LS+  T    SY+  V  +  K+ S+  F+ YVNRVL+L
Sbjct: 57  LTPSLDFVLSETETVYPNSYNDVVPPEHAKDPSIFFFQLYVNRVLRL 103


>ref|XP_012084977.1| PREDICTED: putative FBD-associated F-box protein At5g56410
           [Jatropha curcas]
          Length = 421

 Score = 57.8 bits (138), Expect = 1e-07
 Identities = 28/73 (38%), Positives = 46/73 (63%)
 Frame = -3

Query: 221 THILSFLNTRSAIRTSVLSKRYQLLWTLSPCLDFTLSDYHTETSESYDGRVFSQVKNYSV 42
           +HILSFL T++A+ TS+LS+R++  WT  PCLDF   D    +   + G ++   +  S+
Sbjct: 41  SHILSFLPTKNAVGTSILSRRWRYSWTSVPCLDFDYDDSEIVSQSGFTGLIY---RMRSI 97

Query: 41  VSFESYVNRVLQL 3
           + F ++V+ VL L
Sbjct: 98  LQFVTFVDSVLIL 110


>ref|XP_010694327.1| PREDICTED: F-box/LRR-repeat protein At4g14103-like [Beta vulgaris
           subsp. vulgaris]
          Length = 443

 Score = 53.1 bits (126), Expect = 6e-06
 Identities = 29/73 (39%), Positives = 44/73 (60%)
 Frame = -3

Query: 221 THILSFLNTRSAIRTSVLSKRYQLLWTLSPCLDFTLSDYHTETSESYDGRVFSQVKNYSV 42
           THILSFL T+ A+ TSVLSKR++ +WT  P +D                   S+++  S+
Sbjct: 19  THILSFLETKEAVATSVLSKRWEFIWTRVPVID------------------ISELEIQSL 60

Query: 41  VSFESYVNRVLQL 3
           +SF+++V+RVL L
Sbjct: 61  LSFKAFVDRVLIL 73


>ref|XP_010687797.1| PREDICTED: F-box/FBD/LRR-repeat protein At5g56420-like [Beta
           vulgaris subsp. vulgaris] gi|870851413|gb|KMT03460.1|
           hypothetical protein BVRB_8g191440 [Beta vulgaris subsp.
           vulgaris]
          Length = 450

 Score = 52.8 bits (125), Expect = 8e-06
 Identities = 31/72 (43%), Positives = 44/72 (61%)
 Frame = -3

Query: 218 HILSFLNTRSAIRTSVLSKRYQLLWTLSPCLDFTLSDYHTETSESYDGRVFSQVKNYSVV 39
           HIL+FL TR A+ TS+LSKR+  +WT  P LDF        +S+ Y    F++++    V
Sbjct: 29  HILAFLPTRCAVATSILSKRWMYVWTNVPVLDFMDLPSSMTSSDIY----FNEIQ---YV 81

Query: 38  SFESYVNRVLQL 3
            F++YVNR L L
Sbjct: 82  RFKNYVNRFLLL 93


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