BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00009936
         (4274 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011089162.1| PREDICTED: DNA-directed RNA polymerase V sub...  2262   0.0  
ref|XP_012836427.1| PREDICTED: DNA-directed RNA polymerase V sub...  2128   0.0  
ref|XP_012836426.1| PREDICTED: DNA-directed RNA polymerase V sub...  2128   0.0  
gb|EPS67715.1| hypothetical protein M569_07058, partial [Genlise...  1936   0.0  
emb|CDP18669.1| unnamed protein product [Coffea canephora]           1785   0.0  
ref|XP_009623505.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...  1780   0.0  
ref|XP_009802889.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...  1778   0.0  
ref|XP_015056787.1| PREDICTED: DNA-directed RNA polymerase V sub...  1773   0.0  
ref|XP_010315461.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...  1772   0.0  
ref|XP_002265533.1| PREDICTED: DNA-directed RNA polymerase V sub...  1732   0.0  
ref|XP_012068654.1| PREDICTED: DNA-directed RNA polymerase V sub...  1683   0.0  
ref|XP_007218881.1| hypothetical protein PRUPE_ppa000088mg [Prun...  1681   0.0  
ref|XP_006470866.1| PREDICTED: DNA-directed RNA polymerase V sub...  1679   0.0  
ref|XP_006420718.1| hypothetical protein CICLE_v10004129mg [Citr...  1679   0.0  
ref|XP_008231662.1| PREDICTED: DNA-directed RNA polymerase V sub...  1679   0.0  
ref|XP_007011001.1| DNA-directed RNA polymerase E subunit 1, put...  1678   0.0  
ref|XP_007010999.1| DNA-directed RNA polymerase E subunit 1, put...  1678   0.0  
ref|XP_011655250.1| PREDICTED: DNA-directed RNA polymerase V sub...  1666   0.0  
ref|XP_009361958.1| PREDICTED: DNA-directed RNA polymerase V sub...  1663   0.0  
ref|XP_012449584.1| PREDICTED: DNA-directed RNA polymerase V sub...  1660   0.0  

>ref|XP_011089162.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Sesamum indicum]
          Length = 2096

 Score = 2262 bits (5862), Expect = 0.0
 Identities = 1143/1376 (83%), Positives = 1222/1376 (88%), Gaps = 16/1376 (1%)
 Frame = -1

Query: 4088 MEDSSLPTTFEAKIKGIRFGLATRQEICKASVSDCPISHASQLSNPFLGLPLETGKCESC 3909
            MEDSS PTTFEAKIKGIRFGLATRQEICKAS+SDCPISHASQLSNPFLGLPLETGKCESC
Sbjct: 1    MEDSSAPTTFEAKIKGIRFGLATRQEICKASISDCPISHASQLSNPFLGLPLETGKCESC 60

Query: 3908 GTGEAGQCEGHFGYIELPTPIYHPDHVSEXXXXXXXXXXXXXXXXXXXXXXXXLFERVMS 3729
            GTGEAGQCEGHFGYIELPTPIYHPDHV E                           R   
Sbjct: 61   GTGEAGQCEGHFGYIELPTPIYHPDHVGELKRMLSLLCLKCLKFK----------NRKFQ 110

Query: 3728 CHEEVSQISINEAKTTDGAYYLELKVPSRSRLEEGFWNFLEKYGFRYGNMYNSRPLLPSE 3549
            C EE SQISINEAKT+DGAYYLELKVPSRSRL+EGFW FLEKYGFRYG+MY SRPLLPSE
Sbjct: 111  CCEETSQISINEAKTSDGAYYLELKVPSRSRLQEGFWYFLEKYGFRYGDMY-SRPLLPSE 169

Query: 3548 VMAILKKVPQETRKKLSAKGYFPQDGYIIQHLPVPPNCLSVPDVSDGISTMSTDYSITXX 3369
            VMAIL+K+PQET++KLSAKGYFPQDGYI+QHLPVPPNCLSVPD+SDGISTMSTDYSIT  
Sbjct: 170  VMAILRKIPQETKRKLSAKGYFPQDGYILQHLPVPPNCLSVPDISDGISTMSTDYSITLL 229

Query: 3368 XXXXXXXXXXKNSRSGMPNFESHEIEANELQAAVAHYLQFRGTGKASRDVDTRFGVNKEI 3189
                      KNSRSG PNFESHEIEAN+LQAAVA YLQFRGTGKASRDVDTRFGVNKEI
Sbjct: 230  KKVLRQVEIIKNSRSGKPNFESHEIEANDLQAAVAQYLQFRGTGKASRDVDTRFGVNKEI 289

Query: 3188 NASSTKAWLEKMKTLFIRKGSGFSSRSVITGDPFKGVSEIGLPFEIAQKITFEERVNQHN 3009
            NASSTKAWLEKMKTLFIRKGSGFSSRSVITGDPFKGVSEIGLPFEIAQKITFEERVNQHN
Sbjct: 290  NASSTKAWLEKMKTLFIRKGSGFSSRSVITGDPFKGVSEIGLPFEIAQKITFEERVNQHN 349

Query: 3008 MEFLQKLVDDKLCLTYRDGQSTYSLREGSKGHTFLRHGQVVHRRIMDGDIVFINRPPTTH 2829
            M+FLQKLVD+KLCLTYRDG STYSLREGSKGHTFLR GQVVHRRIMDGDIVFINRPPTTH
Sbjct: 350  MQFLQKLVDEKLCLTYRDGLSTYSLREGSKGHTFLRPGQVVHRRIMDGDIVFINRPPTTH 409

Query: 2828 KHSLQALSVYIHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLEAKAEVVELFSVEKQL 2649
            KHSLQALSVY+HDDHTVKINPLICGPLSADFDGDCIHLFYPQSLEAKAEVVELFSVEKQL
Sbjct: 410  KHSLQALSVYVHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLEAKAEVVELFSVEKQL 469

Query: 2648 LSSHTGNFNLQLATDSLLSLKILFRKYFLSRAAAQQLAMFVPNMLSRPSVIKSNSGPLWT 2469
            LSSHTGNFNLQLATDSLLSLKIL R YFL+RAAAQQLAMFVP++L +P+V+KS+SGPLWT
Sbjct: 470  LSSHTGNFNLQLATDSLLSLKILLRNYFLNRAAAQQLAMFVPSVLPKPAVVKSDSGPLWT 529

Query: 2468 ASQILQMSLPPSFDCSGERHTISNSEVLSLDFNRDVMASIVNDIVTSLFFLKGPKEVLRF 2289
            ASQILQ +LP SFDCSGERH IS SE+LSL+FNRDVMASI+NDIVTSLFFLKGPKEVLRF
Sbjct: 530  ASQILQTTLPSSFDCSGERHIISKSEILSLEFNRDVMASILNDIVTSLFFLKGPKEVLRF 589

Query: 2288 FNSIQSLLMESLYSEGFSVSLRDFFLPRDVLESIQENIQKISPLLYHLRSSYSESIALQL 2109
            FNSIQ LLMESLYSEGFSVSLRDFFLPRDVLESIQENIQKISPLLYHLR+SYSESI LQL
Sbjct: 590  FNSIQPLLMESLYSEGFSVSLRDFFLPRDVLESIQENIQKISPLLYHLRASYSESIDLQL 649

Query: 2108 DSYLRSVKIPVTNFILKSSRIGHLIDSKSESALSKVVQQIGFLGMQLSDRGKFYSAILVK 1929
            D+YLRS+KIPVTNF+LKSS IGHLIDSKSESALSKVVQQIGFLG+Q+SD+GKFYS +LVK
Sbjct: 650  DTYLRSMKIPVTNFVLKSSAIGHLIDSKSESALSKVVQQIGFLGVQISDKGKFYSEMLVK 709

Query: 1928 DMSSMFQKRYPSCDDYPAEEFGLVGRTLFRGLDPYQEMVHSISSREVIVRSTRGLTEPGT 1749
            DMSS+FQK+YPSCDDYP EEFGLVGR LFRGLDPYQEMVHSISSREVIVRSTRGLTEPGT
Sbjct: 710  DMSSLFQKKYPSCDDYPTEEFGLVGRPLFRGLDPYQEMVHSISSREVIVRSTRGLTEPGT 769

Query: 1748 LFKNLMAILRDVVICYDGTVRNTCSNSIIQFEYGVNSANIASEFCAGDPVGVLAATAMSN 1569
            LFKNLMAILRDVVICYDGTVRN CSNSIIQFEYGV+SANIASEFCAGDPVGVLAATAMSN
Sbjct: 770  LFKNLMAILRDVVICYDGTVRNMCSNSIIQFEYGVSSANIASEFCAGDPVGVLAATAMSN 829

Query: 1568 PAYKAVLDXXXXXXXSWEMMKEILLCGVNFKNDTSDRRVILYLNNCDCGRKHCQENAALI 1389
            PAYKAVLD       SWEMMKEILLCGV+FKND SDRRVILYLN+CDCGRKHCQE AALI
Sbjct: 830  PAYKAVLDSSPSSNSSWEMMKEILLCGVSFKNDISDRRVILYLNSCDCGRKHCQETAALI 889

Query: 1388 VKNHLKKVSLKDTAIEFLIEYRSQMMHE--EGNPGPVGHIHLNKTLLIQSNISMHDILEK 1215
            VKN LKKVSLKDTAIEFLIEYRSQM H+  E +PG VGHIHLNKT LIQSNISMH ILE+
Sbjct: 890  VKNQLKKVSLKDTAIEFLIEYRSQMAHDSTEIDPGLVGHIHLNKTQLIQSNISMHGILEQ 949

Query: 1214 CQDAINIQQKKKKVANLFKNIDLXXXXXXXXXXXXXXKWTDVPCIQFCWREAKIDNLEKA 1035
            CQ+ I+  QKKKKV NLFK IDL              KWTD+PCIQF W +A+ D LE+A
Sbjct: 950  CQETISRHQKKKKVGNLFKKIDLSFSDCCSFCQSSKSKWTDLPCIQFSW-QARGDLLERA 1008

Query: 1034 SHLLDDTVCPVLFQTIIKGDPRVSTANIVWISPDRASWIRSPSKGPKGELALDIILEKEA 855
            S +L DTVCPVL QTIIKGDPRVSTANI+WISPD A+WIRSP K PKGELALDIILEKEA
Sbjct: 1009 SDILADTVCPVLLQTIIKGDPRVSTANIIWISPDTATWIRSPCKSPKGELALDIILEKEA 1068

Query: 854  VKKSGDAWRVLMDCCLPIIHLVDTQRSIPYAIKQVDELLGISCAFEQAVQRLSTSVTMVT 675
            V+KSGDAWRV+MD CLP+IHL+DT+RSIPYAIKQV ELLGISCAFEQAVQRLSTSVTMVT
Sbjct: 1069 VRKSGDAWRVVMDSCLPVIHLIDTRRSIPYAIKQVQELLGISCAFEQAVQRLSTSVTMVT 1128

Query: 674  KGVLKDHLLLLANSMTCSGTFIGFNTGGIKSLSRSLGVQVPFMNATLFTPRKCFERAAEK 495
            KGVLKDHLLLL NSMTC+GT IGFN GGIK+LS+SL VQVPFMNATLFTPRKCFERAAEK
Sbjct: 1129 KGVLKDHLLLLGNSMTCAGTLIGFNAGGIKALSKSLSVQVPFMNATLFTPRKCFERAAEK 1188

Query: 494  CHVDNLSSIVASCAWGKHVTVGTGSPFEILWNTGKAELRPNKEVDAYNFLHMVNSRSKPE 315
            CHVDNLSSIV SCAWGKHV+VGTGSPFEILW+T KAEL P+KE+D YNFLH+VNS SKPE
Sbjct: 1189 CHVDNLSSIVGSCAWGKHVSVGTGSPFEILWDTRKAELSPDKEIDVYNFLHLVNSSSKPE 1248

Query: 314  DMGTSCLGAEIDDLDQENDFMEFDLSPVRESGLEKLTFEDGVEFGLNGDDKDGFSKQDAN 135
            DM TSCLGAEI+DLDQE+DFME+D SPVR+ GL+K TFEDG+E+ LNGDD DG SK+DA 
Sbjct: 1249 DMATSCLGAEIEDLDQEDDFMEYDPSPVRDPGLDKPTFEDGIEYRLNGDDNDGLSKEDAK 1308

Query: 134  EPD----SWGKKVNSEENDWMKIGEQSTYAE--ETQDN--------SAWGKKVDSD 9
            EP+    SW KKV+ EENDW K   QST+ +   T++N        S WGKKV+S+
Sbjct: 1309 EPEGSWSSWTKKVDFEENDWTKKAGQSTWEKNVNTEENDWTKKPEQSTWGKKVNSE 1364



 Score = 72.4 bits (176), Expect = 5e-09
 Identities = 34/59 (57%), Positives = 43/59 (72%)
 Frame = -1

Query: 179  LNGDDKDGFSKQDANEPDSWGKKVNSEENDWMKIGEQSTYAEETQDNSAWGKKVDSDGG 3
            +N ++ D  +K    E  +WGK+V SEENDW K+GEQS +AEE Q+ SAWGKKVDSD G
Sbjct: 1412 VNSEENDWTNKP---EESTWGKQVASEENDWKKMGEQSAWAEEAQNGSAWGKKVDSDVG 1467


>ref|XP_012836427.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 isoform X2
            [Erythranthe guttata]
          Length = 2102

 Score = 2128 bits (5515), Expect = 0.0
 Identities = 1086/1387 (78%), Positives = 1198/1387 (86%), Gaps = 25/1387 (1%)
 Frame = -1

Query: 4088 MEDSSLPTTFEAKIKGIRFGLATRQEICKASVSDCPISHASQLSNPFLGLPLETGKCESC 3909
            M++SSL  TFEAKI+GI+FGLATRQEICKAS+SDCPISHASQLSNPFLGLPLETGKCESC
Sbjct: 1    MDESSLLATFEAKIEGIKFGLATRQEICKASISDCPISHASQLSNPFLGLPLETGKCESC 60

Query: 3908 GTGEAGQCEGHFGYIELPTPIYHPDHVSEXXXXXXXXXXXXXXXXXXXXXXXXLFERVMS 3729
            GTGE GQCEGHFGYIELPTPIYHPDHV E                        + ERV+S
Sbjct: 61   GTGEPGQCEGHFGYIELPTPIYHPDHVDELKRMLTLLCLKCLKFKNRKVKNVGVIERVLS 120

Query: 3728 -CHEEVSQISINEAKTTDGAYYLELKVPSRSRLEEGFWNFLEKYGFRYGNMYNSRPLLPS 3552
             C EE SQ+SIN+AKTTDGAY+LELKVP+R R E+G W+FLEKYGFRYG+ Y SRPLLPS
Sbjct: 121  TCCEETSQMSINQAKTTDGAYFLELKVPTRLRHEDGLWHFLEKYGFRYGDGY-SRPLLPS 179

Query: 3551 EVMAILKKVPQETRKKLSAKGYFPQDGYIIQHLPVPPNCLSVPDVSDGISTMSTDYSITX 3372
            EVMAIL+K+PQ+TRKKLSAKGYFPQDGYI+QHLPVPPNCLSVPDVSDGISTMSTDYSI+ 
Sbjct: 180  EVMAILRKLPQDTRKKLSAKGYFPQDGYILQHLPVPPNCLSVPDVSDGISTMSTDYSISL 239

Query: 3371 XXXXXXXXXXXKNSRSGMPNFESHEIEANELQAAVAHYLQFRGTGKASRDVDTRFGVNKE 3192
                       KNSRSGMPNFES EIEANELQAAVA YLQFRGTGKASRDVD+RFGVNKE
Sbjct: 240  LKKVLRQVEIIKNSRSGMPNFESQEIEANELQAAVALYLQFRGTGKASRDVDSRFGVNKE 299

Query: 3191 INASSTKAWLEKMKTLFIRKGSGFSSRSVITGDPFKGVSEIGLPFEIAQKITFEERVNQH 3012
            IN SSTKAWLEKMKTLFIRKGSGFSSRSVITGDPFKGVSEIGLPFEIAQKITFEERVNQH
Sbjct: 300  INVSSTKAWLEKMKTLFIRKGSGFSSRSVITGDPFKGVSEIGLPFEIAQKITFEERVNQH 359

Query: 3011 NMEFLQKLVDDKLCLTYRDGQSTYSLREGSKGHTFLRHGQVVHRRIMDGDIVFINRPPTT 2832
            N+ FLQKLVD+KLCLTYRDG S YSLREGSKGHT LR GQVVHRRIMDGD VFINRPPTT
Sbjct: 360  NILFLQKLVDEKLCLTYRDGLSQYSLREGSKGHTSLRPGQVVHRRIMDGDTVFINRPPTT 419

Query: 2831 HKHSLQALSVYIHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLEAKAEVVELFSVEKQ 2652
            HKHSLQALSVY+HDDHTVKINPLICGPLSADFDGDCIHLFYPQSLEAKAEV+ELFSVEKQ
Sbjct: 420  HKHSLQALSVYVHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLEAKAEVLELFSVEKQ 479

Query: 2651 LLSSHTGNFNLQLATDSLLSLKILFRKYFLSRAAAQQLAMFVPNMLSRPSVIKSNSGPLW 2472
            LLSSHTG FNLQLA DSLLSLK+LFRKYFLSRAAAQQLAMF PN+LSRPSV KS SGPLW
Sbjct: 480  LLSSHTGAFNLQLANDSLLSLKVLFRKYFLSRAAAQQLAMFAPNVLSRPSVSKSASGPLW 539

Query: 2471 TASQILQMSLPPSFDCSGERHTISNSEVLSLDFNRDVMASIVNDIVTSLFFLKGPKEVLR 2292
            TA QIL+++LPPSFD SGERH IS SEVLS+DF+ D M  IVNDIVTSLFFLKGP+EV+R
Sbjct: 540  TAPQILELTLPPSFDSSGERHVISKSEVLSVDFSWDGMTPIVNDIVTSLFFLKGPEEVIR 599

Query: 2291 FFNSIQSLLMESLYSEGFSVSLRDFFLPRDVLESIQENIQKISPLLYHLRSSYSESIALQ 2112
            FFNSIQ LLME+LY+EGFSVSLR+FFLP DVLESIQEN+QKISPLL+HLR+SYSESIALQ
Sbjct: 600  FFNSIQPLLMENLYTEGFSVSLREFFLPLDVLESIQENLQKISPLLFHLRASYSESIALQ 659

Query: 2111 LDSYLRSVKIPVTNFILKSSRIGHLIDSKSESALSKVVQQIGFLGMQLSDRGKFYSAILV 1932
            +D+YLR+VKIPVTNF+ KSS +G LIDSKSESALSKVVQQIGFLG+QLSD+GKFY+  LV
Sbjct: 660  IDNYLRNVKIPVTNFV-KSSAVGRLIDSKSESALSKVVQQIGFLGIQLSDKGKFYTETLV 718

Query: 1931 KDMSSMFQKRYPSCDDYPAEEFGLVGRTLFRGLDPYQEMVHSISSREVIVRSTRGLTEPG 1752
            +DMSS+FQK+YPSCD YPAEEF LV R LFRGL+PYQEMVHSI+SREVIVRSTRGLTEPG
Sbjct: 719  QDMSSLFQKKYPSCDGYPAEEFSLVSRPLFRGLNPYQEMVHSIASREVIVRSTRGLTEPG 778

Query: 1751 TLFKNLMAILRDVVICYDGTVRNTCSNSIIQFEYGVNSANIASEFCAGDPVGVLAATAMS 1572
            TLFKNLMAILRDVVIC+DGTVRN CSNSIIQFEYGVN+ANIASEFCAGDPVGVLAATAMS
Sbjct: 779  TLFKNLMAILRDVVICHDGTVRNMCSNSIIQFEYGVNTANIASEFCAGDPVGVLAATAMS 838

Query: 1571 NPAYKAVLDXXXXXXXSWEMMKEILLCGVNFKNDTSDRRVILYLNNCDCGRKHCQENAAL 1392
            NPAYKAVLD       SWEMMKEILLCGV+FKND +DRRVILYL++CDCGRKHCQE+AAL
Sbjct: 839  NPAYKAVLDSSSSSNSSWEMMKEILLCGVSFKNDITDRRVILYLSHCDCGRKHCQESAAL 898

Query: 1391 IVKNHLKKVSLKDTAIEFLIEYRSQMMHE--EGNPGPVGHIHLNKTLLIQSNISMHDILE 1218
            +VKN LKKVSLKDTA+EFLIEYRSQ +HE  E + G VGHIHLNKT L+QSNISM D+LE
Sbjct: 899  VVKNQLKKVSLKDTAMEFLIEYRSQSVHESHETSHGLVGHIHLNKTQLVQSNISMDDVLE 958

Query: 1217 KCQDAINIQQKKKKVANLFKNIDLXXXXXXXXXXXXXXKWTDVPCIQFCWREAKIDNLEK 1038
            KC++ I +Q KKKKV NLFK ++L              K TDVPCIQF W+ A  + LE+
Sbjct: 959  KCRETIILQHKKKKVGNLFKKVELSVSDCCSFCQSSKSKLTDVPCIQFFWQGAPDNLLER 1018

Query: 1037 ASHLLDDTVCPVLFQTIIKGDPRVSTANIVWISPDRASWIRSPSKGPKGELALDIILEKE 858
            AS+ L DTVCPVL QTIIKGDPR+STAN+VW+SPD  +WIRSPSK P GELALDI+LEKE
Sbjct: 1019 ASYFLADTVCPVLLQTIIKGDPRISTANVVWLSPDTPTWIRSPSKSPIGELALDIVLEKE 1078

Query: 857  AVKKSGDAWRVLMDCCLPIIHLVDTQRSIPYAIKQVDELLGISCAFEQAVQRLSTSVTMV 678
            AV+KSGDAWRV+MD CLP++HL+DTQRSIPY IKQV ELLGISCAFEQAVQRLSTSVTMV
Sbjct: 1079 AVRKSGDAWRVVMDSCLPVMHLIDTQRSIPYGIKQVQELLGISCAFEQAVQRLSTSVTMV 1138

Query: 677  TKGVLKDHLLLLANSMTCSGTFIGFNTGGIKSLSRSLGVQVPFMNATLFTPRKCFERAAE 498
            TKGVLKDHLLLL NSMTC+GT IGFN+GGIK+LSR LGVQVPFMNATLFTPRKCFE+AAE
Sbjct: 1139 TKGVLKDHLLLLGNSMTCAGTLIGFNSGGIKALSRLLGVQVPFMNATLFTPRKCFEKAAE 1198

Query: 497  KCHVDNLSSIVASCAWGKHVTVGTGSPFEILWNTGKAELRPNKEVDAYNFLHMVNSRSKP 318
            KC+VDNLSSIVASCAWGKHV+VGTGSPFEILW+T KAEL P+KE+D Y+FLHMVNS SK 
Sbjct: 1199 KCYVDNLSSIVASCAWGKHVSVGTGSPFEILWDTRKAELSPDKEIDVYDFLHMVNS-SKL 1257

Query: 317  EDMGTSCLGAEIDDLDQENDFMEFDLSPVRESGLEKLTFEDGVEFGLNGDDKDGFSKQDA 138
            ED GTSCLGA+I+DL QE D+M+ DLSPVRE G EK TFE  VEFGLNG   DGFSK+  
Sbjct: 1258 EDAGTSCLGADIEDLGQE-DYMDLDLSPVREPGSEKPTFECEVEFGLNG---DGFSKEGG 1313

Query: 137  NEPD----SWGKKVNSEENDWMKIGEQSTYAE------------------ETQDNSAWGK 24
             E +    SWGKKV++E+ DW K  E +T+ +                  + +++S+WGK
Sbjct: 1314 KESEDSWSSWGKKVDTED-DWTKKAELTTWGKKVDREADDWILKGQKSKTDEENSSSWGK 1372

Query: 23   KVDSDGG 3
            KV+SD G
Sbjct: 1373 KVESDAG 1379



 Score = 62.4 bits (150), Expect = 6e-06
 Identities = 29/50 (58%), Positives = 35/50 (70%)
 Frame = -1

Query: 152  SKQDANEPDSWGKKVNSEENDWMKIGEQSTYAEETQDNSAWGKKVDSDGG 3
            S  + N P +WGKKV SE N+W K GE+ST  E  Q++SAWGKK  SDGG
Sbjct: 1481 SVDNVNSP-AWGKKVTSEGNEWTKAGEKSTSPEAAQNSSAWGKKAGSDGG 1529


>ref|XP_012836426.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 isoform X1
            [Erythranthe guttata] gi|604334092|gb|EYU38281.1|
            hypothetical protein MIMGU_mgv1a000048mg [Erythranthe
            guttata]
          Length = 2113

 Score = 2128 bits (5515), Expect = 0.0
 Identities = 1086/1387 (78%), Positives = 1198/1387 (86%), Gaps = 25/1387 (1%)
 Frame = -1

Query: 4088 MEDSSLPTTFEAKIKGIRFGLATRQEICKASVSDCPISHASQLSNPFLGLPLETGKCESC 3909
            M++SSL  TFEAKI+GI+FGLATRQEICKAS+SDCPISHASQLSNPFLGLPLETGKCESC
Sbjct: 1    MDESSLLATFEAKIEGIKFGLATRQEICKASISDCPISHASQLSNPFLGLPLETGKCESC 60

Query: 3908 GTGEAGQCEGHFGYIELPTPIYHPDHVSEXXXXXXXXXXXXXXXXXXXXXXXXLFERVMS 3729
            GTGE GQCEGHFGYIELPTPIYHPDHV E                        + ERV+S
Sbjct: 61   GTGEPGQCEGHFGYIELPTPIYHPDHVDELKRMLTLLCLKCLKFKNRKVKNVGVIERVLS 120

Query: 3728 -CHEEVSQISINEAKTTDGAYYLELKVPSRSRLEEGFWNFLEKYGFRYGNMYNSRPLLPS 3552
             C EE SQ+SIN+AKTTDGAY+LELKVP+R R E+G W+FLEKYGFRYG+ Y SRPLLPS
Sbjct: 121  TCCEETSQMSINQAKTTDGAYFLELKVPTRLRHEDGLWHFLEKYGFRYGDGY-SRPLLPS 179

Query: 3551 EVMAILKKVPQETRKKLSAKGYFPQDGYIIQHLPVPPNCLSVPDVSDGISTMSTDYSITX 3372
            EVMAIL+K+PQ+TRKKLSAKGYFPQDGYI+QHLPVPPNCLSVPDVSDGISTMSTDYSI+ 
Sbjct: 180  EVMAILRKLPQDTRKKLSAKGYFPQDGYILQHLPVPPNCLSVPDVSDGISTMSTDYSISL 239

Query: 3371 XXXXXXXXXXXKNSRSGMPNFESHEIEANELQAAVAHYLQFRGTGKASRDVDTRFGVNKE 3192
                       KNSRSGMPNFES EIEANELQAAVA YLQFRGTGKASRDVD+RFGVNKE
Sbjct: 240  LKKVLRQVEIIKNSRSGMPNFESQEIEANELQAAVALYLQFRGTGKASRDVDSRFGVNKE 299

Query: 3191 INASSTKAWLEKMKTLFIRKGSGFSSRSVITGDPFKGVSEIGLPFEIAQKITFEERVNQH 3012
            IN SSTKAWLEKMKTLFIRKGSGFSSRSVITGDPFKGVSEIGLPFEIAQKITFEERVNQH
Sbjct: 300  INVSSTKAWLEKMKTLFIRKGSGFSSRSVITGDPFKGVSEIGLPFEIAQKITFEERVNQH 359

Query: 3011 NMEFLQKLVDDKLCLTYRDGQSTYSLREGSKGHTFLRHGQVVHRRIMDGDIVFINRPPTT 2832
            N+ FLQKLVD+KLCLTYRDG S YSLREGSKGHT LR GQVVHRRIMDGD VFINRPPTT
Sbjct: 360  NILFLQKLVDEKLCLTYRDGLSQYSLREGSKGHTSLRPGQVVHRRIMDGDTVFINRPPTT 419

Query: 2831 HKHSLQALSVYIHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLEAKAEVVELFSVEKQ 2652
            HKHSLQALSVY+HDDHTVKINPLICGPLSADFDGDCIHLFYPQSLEAKAEV+ELFSVEKQ
Sbjct: 420  HKHSLQALSVYVHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLEAKAEVLELFSVEKQ 479

Query: 2651 LLSSHTGNFNLQLATDSLLSLKILFRKYFLSRAAAQQLAMFVPNMLSRPSVIKSNSGPLW 2472
            LLSSHTG FNLQLA DSLLSLK+LFRKYFLSRAAAQQLAMF PN+LSRPSV KS SGPLW
Sbjct: 480  LLSSHTGAFNLQLANDSLLSLKVLFRKYFLSRAAAQQLAMFAPNVLSRPSVSKSASGPLW 539

Query: 2471 TASQILQMSLPPSFDCSGERHTISNSEVLSLDFNRDVMASIVNDIVTSLFFLKGPKEVLR 2292
            TA QIL+++LPPSFD SGERH IS SEVLS+DF+ D M  IVNDIVTSLFFLKGP+EV+R
Sbjct: 540  TAPQILELTLPPSFDSSGERHVISKSEVLSVDFSWDGMTPIVNDIVTSLFFLKGPEEVIR 599

Query: 2291 FFNSIQSLLMESLYSEGFSVSLRDFFLPRDVLESIQENIQKISPLLYHLRSSYSESIALQ 2112
            FFNSIQ LLME+LY+EGFSVSLR+FFLP DVLESIQEN+QKISPLL+HLR+SYSESIALQ
Sbjct: 600  FFNSIQPLLMENLYTEGFSVSLREFFLPLDVLESIQENLQKISPLLFHLRASYSESIALQ 659

Query: 2111 LDSYLRSVKIPVTNFILKSSRIGHLIDSKSESALSKVVQQIGFLGMQLSDRGKFYSAILV 1932
            +D+YLR+VKIPVTNF+ KSS +G LIDSKSESALSKVVQQIGFLG+QLSD+GKFY+  LV
Sbjct: 660  IDNYLRNVKIPVTNFV-KSSAVGRLIDSKSESALSKVVQQIGFLGIQLSDKGKFYTETLV 718

Query: 1931 KDMSSMFQKRYPSCDDYPAEEFGLVGRTLFRGLDPYQEMVHSISSREVIVRSTRGLTEPG 1752
            +DMSS+FQK+YPSCD YPAEEF LV R LFRGL+PYQEMVHSI+SREVIVRSTRGLTEPG
Sbjct: 719  QDMSSLFQKKYPSCDGYPAEEFSLVSRPLFRGLNPYQEMVHSIASREVIVRSTRGLTEPG 778

Query: 1751 TLFKNLMAILRDVVICYDGTVRNTCSNSIIQFEYGVNSANIASEFCAGDPVGVLAATAMS 1572
            TLFKNLMAILRDVVIC+DGTVRN CSNSIIQFEYGVN+ANIASEFCAGDPVGVLAATAMS
Sbjct: 779  TLFKNLMAILRDVVICHDGTVRNMCSNSIIQFEYGVNTANIASEFCAGDPVGVLAATAMS 838

Query: 1571 NPAYKAVLDXXXXXXXSWEMMKEILLCGVNFKNDTSDRRVILYLNNCDCGRKHCQENAAL 1392
            NPAYKAVLD       SWEMMKEILLCGV+FKND +DRRVILYL++CDCGRKHCQE+AAL
Sbjct: 839  NPAYKAVLDSSSSSNSSWEMMKEILLCGVSFKNDITDRRVILYLSHCDCGRKHCQESAAL 898

Query: 1391 IVKNHLKKVSLKDTAIEFLIEYRSQMMHE--EGNPGPVGHIHLNKTLLIQSNISMHDILE 1218
            +VKN LKKVSLKDTA+EFLIEYRSQ +HE  E + G VGHIHLNKT L+QSNISM D+LE
Sbjct: 899  VVKNQLKKVSLKDTAMEFLIEYRSQSVHESHETSHGLVGHIHLNKTQLVQSNISMDDVLE 958

Query: 1217 KCQDAINIQQKKKKVANLFKNIDLXXXXXXXXXXXXXXKWTDVPCIQFCWREAKIDNLEK 1038
            KC++ I +Q KKKKV NLFK ++L              K TDVPCIQF W+ A  + LE+
Sbjct: 959  KCRETIILQHKKKKVGNLFKKVELSVSDCCSFCQSSKSKLTDVPCIQFFWQGAPDNLLER 1018

Query: 1037 ASHLLDDTVCPVLFQTIIKGDPRVSTANIVWISPDRASWIRSPSKGPKGELALDIILEKE 858
            AS+ L DTVCPVL QTIIKGDPR+STAN+VW+SPD  +WIRSPSK P GELALDI+LEKE
Sbjct: 1019 ASYFLADTVCPVLLQTIIKGDPRISTANVVWLSPDTPTWIRSPSKSPIGELALDIVLEKE 1078

Query: 857  AVKKSGDAWRVLMDCCLPIIHLVDTQRSIPYAIKQVDELLGISCAFEQAVQRLSTSVTMV 678
            AV+KSGDAWRV+MD CLP++HL+DTQRSIPY IKQV ELLGISCAFEQAVQRLSTSVTMV
Sbjct: 1079 AVRKSGDAWRVVMDSCLPVMHLIDTQRSIPYGIKQVQELLGISCAFEQAVQRLSTSVTMV 1138

Query: 677  TKGVLKDHLLLLANSMTCSGTFIGFNTGGIKSLSRSLGVQVPFMNATLFTPRKCFERAAE 498
            TKGVLKDHLLLL NSMTC+GT IGFN+GGIK+LSR LGVQVPFMNATLFTPRKCFE+AAE
Sbjct: 1139 TKGVLKDHLLLLGNSMTCAGTLIGFNSGGIKALSRLLGVQVPFMNATLFTPRKCFEKAAE 1198

Query: 497  KCHVDNLSSIVASCAWGKHVTVGTGSPFEILWNTGKAELRPNKEVDAYNFLHMVNSRSKP 318
            KC+VDNLSSIVASCAWGKHV+VGTGSPFEILW+T KAEL P+KE+D Y+FLHMVNS SK 
Sbjct: 1199 KCYVDNLSSIVASCAWGKHVSVGTGSPFEILWDTRKAELSPDKEIDVYDFLHMVNS-SKL 1257

Query: 317  EDMGTSCLGAEIDDLDQENDFMEFDLSPVRESGLEKLTFEDGVEFGLNGDDKDGFSKQDA 138
            ED GTSCLGA+I+DL QE D+M+ DLSPVRE G EK TFE  VEFGLNG   DGFSK+  
Sbjct: 1258 EDAGTSCLGADIEDLGQE-DYMDLDLSPVREPGSEKPTFECEVEFGLNG---DGFSKEGG 1313

Query: 137  NEPD----SWGKKVNSEENDWMKIGEQSTYAE------------------ETQDNSAWGK 24
             E +    SWGKKV++E+ DW K  E +T+ +                  + +++S+WGK
Sbjct: 1314 KESEDSWSSWGKKVDTED-DWTKKAELTTWGKKVDREADDWILKGQKSKTDEENSSSWGK 1372

Query: 23   KVDSDGG 3
            KV+SD G
Sbjct: 1373 KVESDAG 1379



 Score = 62.4 bits (150), Expect = 6e-06
 Identities = 29/50 (58%), Positives = 35/50 (70%)
 Frame = -1

Query: 152  SKQDANEPDSWGKKVNSEENDWMKIGEQSTYAEETQDNSAWGKKVDSDGG 3
            S  + N P +WGKKV SE N+W K GE+ST  E  Q++SAWGKK  SDGG
Sbjct: 1492 SVDNVNSP-AWGKKVTSEGNEWTKAGEKSTSPEAAQNSSAWGKKAGSDGG 1540


>gb|EPS67715.1| hypothetical protein M569_07058, partial [Genlisea aurea]
          Length = 1379

 Score = 1936 bits (5016), Expect = 0.0
 Identities = 972/1381 (70%), Positives = 1125/1381 (81%), Gaps = 21/1381 (1%)
 Frame = -1

Query: 4088 MEDSSLPTTFEAKIKGIRFGLATRQEICKASVSDCPISHASQLSNPFLGLPLETGKCESC 3909
            ME+SS+ T  E  I GI FGLAT QEICK+S+SDCPI+HASQLSNPFLGLPL++GKCESC
Sbjct: 1    MENSSVATVPEGMISGISFGLATFQEICKSSISDCPITHASQLSNPFLGLPLDSGKCESC 60

Query: 3908 GTGEAGQCEGHFGYIELPTPIYHPDHVSEXXXXXXXXXXXXXXXXXXXXXXXXLFERV-M 3732
            GTGE GQCEGHFGYIE PTPIYHPDH++E                          ER+ M
Sbjct: 61   GTGEPGQCEGHFGYIEFPTPIYHPDHITELKKMLSLLCLKCLKLKTRKVKNIGAMERMLM 120

Query: 3731 SCHEEVSQISINEAKTTDGAYYLELKVPSRSRLEEGFWNFLEKYGFRYGNMYNSRPLLPS 3552
            SC EE SQI++ E KT+DGA YLELKVP +S+L EG+WNFLEK+GFRYG+ Y SRPLLPS
Sbjct: 121  SCCEETSQITVYETKTSDGASYLELKVPPKSKLREGYWNFLEKHGFRYGHTY-SRPLLPS 179

Query: 3551 EVMAILKKVPQETRKKLSAKGYFPQDGYIIQHLPVPPNCLSVPDVSDGISTMSTDYSITX 3372
            EVM+ILKK+P+ET+K L ++GYFPQ+GY+++ LPVPPNCL VPD+SDG+STMS DYSIT 
Sbjct: 180  EVMSILKKLPKETKKSLLSRGYFPQEGYVLRFLPVPPNCLCVPDISDGVSTMSKDYSITL 239

Query: 3371 XXXXXXXXXXXKNSRSGMPNFESHEIEANELQAAVAHYLQFRGTGKASRDVDTRFGVNKE 3192
                       KNSRSGMPNFESHEIEANELQA+V+ YLQFRGTGKA+RDVD+RFGV+KE
Sbjct: 240  LKKVLRQVEVIKNSRSGMPNFESHEIEANELQASVSQYLQFRGTGKAARDVDSRFGVHKE 299

Query: 3191 INASSTKAWLEKMKTLFIRKGSGFSSRSVITGDPFKGVSEIGLPFEIAQKITFEERVNQH 3012
            IN+SSTKAWLEKMKTLFIRKGSGFSSRSV+TGD FKGVSEIGLP+EIAQKITFEERVN H
Sbjct: 300  INSSSTKAWLEKMKTLFIRKGSGFSSRSVVTGDAFKGVSEIGLPYEIAQKITFEERVNVH 359

Query: 3011 NMEFLQKLVDDKLCLTYRDGQSTYSLREGSKGHTFLRHGQVVHRRIMDGDIVFINRPPTT 2832
            N++FLQKLVD+KLCLTYRDG STYSLREGSKGHTFL+ GQ+VHRRIMDGD+ FINRPPTT
Sbjct: 360  NIDFLQKLVDEKLCLTYRDGSSTYSLREGSKGHTFLKPGQIVHRRIMDGDLAFINRPPTT 419

Query: 2831 HKHSLQALSVYIHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLEAKAEVVELFSVEKQ 2652
            HKHSLQALSVY+HD HTVKINPLICGPL+ADFDGDCIHLFYPQSLEA+AEVVELFSVEKQ
Sbjct: 420  HKHSLQALSVYVHDGHTVKINPLICGPLAADFDGDCIHLFYPQSLEARAEVVELFSVEKQ 479

Query: 2651 LLSSHTGNFNLQLATDSLLSLKILFRKYFLSRAAAQQLAMFVPNMLSRPSVIKSNSGPLW 2472
            LLSSHTGNFNLQL TDSLLSLKILF  +FL + AAQQLAMFV NML+ P+V+KS  GPLW
Sbjct: 480  LLSSHTGNFNLQLTTDSLLSLKILFGNHFLRKKAAQQLAMFV-NMLAGPAVVKSKIGPLW 538

Query: 2471 TASQILQMSLPPSFDCSGERHTISNSEVLSLDFNRDVMASIVNDIVTSLFFLKGPKEVLR 2292
            TASQILQ +LP SF CSGERH I+ SEVL+LD +RD+M ++VND+VTSLFFLKGPK+VL 
Sbjct: 539  TASQILQATLPSSFGCSGERHLIAKSEVLNLDVDRDLMTAVVNDLVTSLFFLKGPKDVLG 598

Query: 2291 FFNSIQSLLMESLYSEGFSVSLRDFFLPRDVLESIQENIQKISPLLYHLRSSYSESIALQ 2112
            FFNS+Q LLMESL +EGFSVSL+DFFLPR+VLE I+ENIQKISPLL HLR  YSESIALQ
Sbjct: 599  FFNSVQPLLMESLQAEGFSVSLKDFFLPREVLEGIRENIQKISPLLSHLRDHYSESIALQ 658

Query: 2111 LDSYLRSVKIPVTNFILKSSRIGHLIDSKSESALSKVVQQIGFLGMQLSDRGKFYSAILV 1932
            L+SYL SVK PVT FI+ SS IG L DS+SES LSKVVQQIGF G QLS +GKFY+  LV
Sbjct: 659  LESYLSSVKTPVTEFIVNSSAIGFLTDSRSESGLSKVVQQIGFCGTQLSSKGKFYTERLV 718

Query: 1931 KDMSSMFQKRYPSCDDYPAEEFGLVGRTLFRGLDPYQEMVHSISSREVIVRSTRGLTEPG 1752
            KD+SS+F+ +YPS DD P E+FGLV + LFRGL+PYQEMVHSISSREVIVRS+RGLTEPG
Sbjct: 719  KDLSSLFRSKYPSSDDCPTEDFGLVCQPLFRGLNPYQEMVHSISSREVIVRSSRGLTEPG 778

Query: 1751 TLFKNLMAILRDVVICYDGTVRNTCSNSIIQFEYGVNSANIASEFCAGDPVGVLAATAMS 1572
            TLFKNLMAILRDVVICYDGTVRN CSNSIIQFEY  NS +I +EFCAGDPVGVLAAT+MS
Sbjct: 779  TLFKNLMAILRDVVICYDGTVRNMCSNSIIQFEYSANSTDIVTEFCAGDPVGVLAATSMS 838

Query: 1571 NPAYKAVLDXXXXXXXSWEMMKEILLCGVNFKNDTSDRRVILYLNNCDCGRKHCQENAAL 1392
            NPAYKAVLD       +W+MMK+ILLC  +FKND SDRRVILYL +C+CGRKHCQE  AL
Sbjct: 839  NPAYKAVLDSSSSSNSAWQMMKDILLCATSFKNDISDRRVILYLTDCECGRKHCQETGAL 898

Query: 1391 IVKNHLKKVSLKDTAIEFLIEYRSQMMH--EEGNPGPVGHIHLNKTLLIQSNISMHDILE 1218
            +V+NHLKKV+LKDTA++FLIEY  Q+    EEG PG VGHIHL++  LI+SN++   I E
Sbjct: 899  VVQNHLKKVTLKDTAVDFLIEYFHQLCQSLEEGYPGLVGHIHLSEMELIRSNVNKDRIFE 958

Query: 1217 KCQDAINIQQKKKKVANLFKNIDLXXXXXXXXXXXXXXKWTDVPCIQFCWREAKIDNLEK 1038
             C + IN+ +KKKKV NLFK I L              K T+VPC+QF W  A ID+++K
Sbjct: 959  GCLETINLYEKKKKVGNLFKKIKLSYSDHCTFCASSKSKRTEVPCVQFLWNGA-IDDIDK 1017

Query: 1037 ASHLLDDTVCPVLFQTIIKGDPRVSTANIVWISPDRASWIRSPSKGPKGELALDIILEKE 858
             SHLL DTVCP L QT+IKGDPRVSTA IVW+SP  A+WIRSPSK   GE+A++++ EKE
Sbjct: 1018 VSHLLSDTVCPALLQTVIKGDPRVSTAEIVWVSPGTATWIRSPSKNLNGEMAIEVVFEKE 1077

Query: 857  AVKKSGDAWRVLMDCCLPIIHLVDTQRSIPYAIKQVDELLGISCAFEQAVQRLSTSVTMV 678
            A + SGDAWRV MD C+P++HL+DT+RSIPYAIKQV ELLGISCAFEQAVQRLSTSVTMV
Sbjct: 1078 AARHSGDAWRVAMDSCVPVMHLIDTKRSIPYAIKQVQELLGISCAFEQAVQRLSTSVTMV 1137

Query: 677  TKGVLKDHLLLLANSMTCSGTFIGFNTGGIKSLSRSLGVQVPFMNATLFTPRKCFERAAE 498
            TKGVLKDH+LLL N+MTC+GT IGFN+GGIK+LS+SL + VPFM ATLFTPRKCFERAAE
Sbjct: 1138 TKGVLKDHILLLGNNMTCAGTLIGFNSGGIKALSQSLDLHVPFMTATLFTPRKCFERAAE 1197

Query: 497  KCHVDNLSSIVASCAWGKHVTVGTGSPFEILWNTGKAELRPNKEVDAYNFLHMVNSRSKP 318
            KCHVD L+S+V SCAWGKHV+VGTGSPFEILW+T K +L P+KE+D Y FLH+VN  S P
Sbjct: 1198 KCHVDKLTSVVGSCAWGKHVSVGTGSPFEILWDTRKTDLNPDKELDVYGFLHLVNG-SVP 1256

Query: 317  EDMGTSCLGAEIDDLDQENDFMEFDLSPVRESGLEKLTFEDGVEFGLNGDDKDGFSKQDA 138
             DMGTSC+G EI+DLDQE   M+F+LSP RE GLEK TF+D  EFG+N +  +G ++   
Sbjct: 1257 LDMGTSCIGTEIEDLDQE--LMDFELSPEREPGLEKPTFDDEHEFGMNSN--EGVTEVKG 1312

Query: 137  NEPDSWGKKVNSEENDWMKIGEQSTYA------------------EETQDNSAWGKKVDS 12
            +   SWG  V  + NDW    E + +                   EE  D++ WG+K  S
Sbjct: 1313 SW-SSWGNVVAPDTNDWSNKVESTGWGSAVNSELKNKNEDSWGQNEEKPDDTVWGQKEKS 1371

Query: 11   D 9
            D
Sbjct: 1372 D 1372


>emb|CDP18669.1| unnamed protein product [Coffea canephora]
          Length = 1946

 Score = 1785 bits (4623), Expect = 0.0
 Identities = 906/1365 (66%), Positives = 1076/1365 (78%), Gaps = 12/1365 (0%)
 Frame = -1

Query: 4088 MEDSSLPTTFEAKIKGIRFGLATRQEICKASVSDCPISHASQLSNPFLGLPLETGKCESC 3909
            ME+S   T+F  KI  I F LAT+QEICK+S+SDC I+HASQLSNPFLGLPLE GKCESC
Sbjct: 1    MEESPTSTSFGGKITRISFSLATQQEICKSSISDCAITHASQLSNPFLGLPLEAGKCESC 60

Query: 3908 GTGEAGQCEGHFGYIELPTPIYHPDHVSEXXXXXXXXXXXXXXXXXXXXXXXXL--FERV 3735
            G  E GQC  HFGYIELP PIYHPDHV E                        +   ER+
Sbjct: 61   GASEPGQC--HFGYIELPIPIYHPDHVRELKRLLSLLCLKCLKIRNRKFQVKNVGVLERM 118

Query: 3734 MS-CHEEVSQISINEAKTTDGAYYLELKVPSRSRLEEGFWNFLEKYGFRYGNMYNSRPLL 3558
            +S C EE SQ++INEA+  DGA YLELKVPS+ RL+   W+FLEKYG+RY    N RPLL
Sbjct: 119  LSSCCEEASQVAINEARNPDGALYLELKVPSKIRLQGNVWSFLEKYGYRYDK--NPRPLL 176

Query: 3557 PSEVMAILKKVPQETRKKLSAKGYFPQDGYIIQHLPVPPNCLSVPDVSDGISTMSTDYSI 3378
             SEVMA+L+++  +T+KKLSAKGYFPQDGYI+Q+LPVPPNCLSVPD+SDG + MS D+S+
Sbjct: 177  ASEVMAMLRRLSSDTKKKLSAKGYFPQDGYILQYLPVPPNCLSVPDISDGTNVMSKDHSL 236

Query: 3377 TXXXXXXXXXXXXKNSRSGMPNFESHEIEANELQAAVAHYLQFRGTGKASRDVDTRFGVN 3198
            +            KNSRSGMPNFESH+IEAN+LQ +VA Y +FRGTGKASRDVD RFGV+
Sbjct: 237  SLLKRALKQIEVIKNSRSGMPNFESHQIEANDLQISVAQYFEFRGTGKASRDVDPRFGVS 296

Query: 3197 KEINASSTKAWLEKMKTLFIRKGSGFSSRSVITGDPFKGVSEIGLPFEIAQKITFEERVN 3018
            KE N SSTKAWLEKMKTLFIRKGSGFSSRSVITGDP+KGV+EIGLPFEIAQ+ITFEERV+
Sbjct: 297  KESNTSSTKAWLEKMKTLFIRKGSGFSSRSVITGDPYKGVNEIGLPFEIAQRITFEERVS 356

Query: 3017 QHNMEFLQKLVDDKLCLTYRDGQSTYSLREGSKGHTFLRHGQVVHRRIMDGDIVFINRPP 2838
            QHNM +LQKLVD+KLCLTYRDG STYSLREGSKGHTFLR GQVVHRRIMDGD+VFINRPP
Sbjct: 357  QHNMNYLQKLVDEKLCLTYRDGMSTYSLREGSKGHTFLRPGQVVHRRIMDGDMVFINRPP 416

Query: 2837 TTHKHSLQALSVYIHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLEAKAEVVELFSVE 2658
            TTHKHSLQALSVYIHDDHTVKINPLICGPLSADFDGDCIHLFYPQSL A++EV+ELFSVE
Sbjct: 417  TTHKHSLQALSVYIHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLAARSEVLELFSVE 476

Query: 2657 KQLLSSHTGNFNLQLATDSLLSLKILFRKYFLSRAAAQQLAMFVPNMLSRPSVIK-SNSG 2481
            KQLLSSHTGNFNLQLATDSLLSLK++F+KYF  R AA+QLAMFVP  L  P+V+K  +SG
Sbjct: 477  KQLLSSHTGNFNLQLATDSLLSLKLMFKKYFFDRVAAEQLAMFVPAALPMPAVVKYRSSG 536

Query: 2480 PLWTASQILQMSLPPSFDCSGERHTISNSEVLSLDFNRDVMASIVNDIVTSLFFLKGPKE 2301
            P WT  Q+LQ +LP SF+CSGER+   +SE++ LDFNRD++ S   D++TS+FF KGPKE
Sbjct: 537  PFWTVLQLLQTALPASFECSGERYLTHSSELVKLDFNRDLLQSTFIDVITSIFFSKGPKE 596

Query: 2300 VLRFFNSIQSLLMESLYSEGFSVSLRDFFLPRDVLESIQENIQKISPLLYHLRSSYSESI 2121
            VLRFFN +  LLME+LYSEGFSV L DF++P+ ++E++Q+++Q ISPLLYH+RS+ SESI
Sbjct: 597  VLRFFNFLTPLLMENLYSEGFSVCLEDFYIPKAIIEAVQQSLQDISPLLYHMRSTQSESI 656

Query: 2120 ALQLDSYLRSVKIPVTNFILKSSRIGHLIDSKSESALSKVVQQIGFLGMQLSDRGKFYSA 1941
             LQL+++LR VK PV+NF+LKSS +G+LIDSKSESAL+KVVQQIGFLGMQ+SD+GKFYS+
Sbjct: 657  KLQLENFLRGVKSPVSNFVLKSSAMGYLIDSKSESALNKVVQQIGFLGMQISDKGKFYSS 716

Query: 1940 ILVKDMSSMFQKRYPSCDDYPAEEFGLVGRTLFRGLDPYQEMVHSISSREVIVRSTRGLT 1761
             LV D++ +F+K+YPS   YP+EE+GLV   LF GLDPYQEMVHSISSREVIVRSTRGLT
Sbjct: 717  TLVNDLAQLFKKKYPSSGHYPSEEYGLVRSCLFYGLDPYQEMVHSISSREVIVRSTRGLT 776

Query: 1760 EPGTLFKNLMAILRDVVICYDGTVRNTCSNSIIQFEYGVN-SANIASEFCAGDPVGVLAA 1584
            EPGTLFKNLMAILRDV+ICYDGTVRN CSNSIIQFEYG+N   +  SEF AG+PVGVLAA
Sbjct: 777  EPGTLFKNLMAILRDVIICYDGTVRNMCSNSIIQFEYGMNHGISFQSEFGAGEPVGVLAA 836

Query: 1583 TAMSNPAYKAVLDXXXXXXXSWEMMKEILLCGVNFKNDTSDRRVILYLNNCDCGRKHCQE 1404
            TAMSNPAYKAVLD       +WEMMKEILLCGVNFKN+ SDRRVILYLN+C CGRK+C+E
Sbjct: 837  TAMSNPAYKAVLDSSPSSNSAWEMMKEILLCGVNFKNEVSDRRVILYLNDCGCGRKYCRE 896

Query: 1403 NAALIVKNHLKKVSLKDTAIEFLIEYRSQMM---HEEGNPGPVGHIHLNKTLLIQSNISM 1233
            NAA +VKN L+KVSLKD A E LIEYR Q       E + G VGHIHLN+ ++  SNI+M
Sbjct: 897  NAAYVVKNQLRKVSLKDVAFELLIEYRQQYSVYESSETDTGLVGHIHLNEAMMKSSNITM 956

Query: 1232 HDILEKCQDAINIQQKKKKVANLFKNIDLXXXXXXXXXXXXXXKWTDVPCIQFCWREAKI 1053
            ++IL KC++ I   QK+KKV   FK + L              K  + PC++F  R+A  
Sbjct: 957  NEILSKCEERIISYQKRKKVGFKFKGVLLGVSDDCSFRQSSARKLAETPCLKFICRDASD 1016

Query: 1052 DNLEKASHLLDDTVCPVLFQTIIKGDPRVSTANIVWISPDRASWIRSPSKGPKGELALDI 873
              LE+ SH+L +T+CP L +T+IKGDPRVS+ NI+WISPD ++WI S  K  +GELALD+
Sbjct: 1017 YQLEQRSHVLAETICPALLETVIKGDPRVSSVNIIWISPDTSTWISSQCKSQRGELALDV 1076

Query: 872  ILEKEAVKKSGDAWRVLMDCCLPIIHLVDTQRSIPYAIKQVDELLGISCAFEQAVQRLST 693
            +LEK+AVK++GDAWRV+MD CLP+  L+DT RSIPYAIKQV ELLGISCAFEQAV+RLST
Sbjct: 1077 VLEKDAVKQTGDAWRVVMDACLPVTQLIDTNRSIPYAIKQVQELLGISCAFEQAVRRLST 1136

Query: 692  SVTMVTKGVLKDHLLLLANSMTCSGTFIGFNTGGIKSLSRSLGVQVPFMNATLFTPRKCF 513
            SV +VTKGVLKDHL+LLANSMTC+G  IGFN GGIK+LSRSL VQVPF  ATL  PRKCF
Sbjct: 1137 SVMLVTKGVLKDHLVLLANSMTCAGNLIGFNIGGIKALSRSLDVQVPFTEATLSAPRKCF 1196

Query: 512  ERAAEKCHVDNLSSIVASCAWGKHVTVGTGSPFEILWNTGKAELRPNKEVDAYNFLHMVN 333
            ERAAEKCHVD+LSS+V SC+WGKHV VGTGSPF+IL +T K EL     +D Y+FL +V 
Sbjct: 1197 ERAAEKCHVDSLSSVVGSCSWGKHVAVGTGSPFDILLDTKKVELNQPAGIDVYDFLQLVR 1256

Query: 332  SRSKPEDMGTSCLGAEIDDLDQENDFMEFDLSPVRESGLEKLTFEDGVEFG---LNGDDK 162
              S  ++  T+CLGAEI++LD E++ M FDLSPVR+S  ++ TFED  E      N   K
Sbjct: 1257 GSSGGDETNTTCLGAEIENLDLEDEAMTFDLSPVRDS--DQPTFEDRHELENNLANPRSK 1314

Query: 161  DGFSKQDANEPDSWGKKVNSEENDWMKIGE-QSTYAEETQDNSAW 30
            +   ++   E DS   +       W K  + Q+T A     +SAW
Sbjct: 1315 ESIQRELGWERDS--PQTAELGGGWEKASKAQNTSANVLVSDSAW 1357


>ref|XP_009623505.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase V subunit
            1 [Nicotiana tomentosiformis]
          Length = 1983

 Score = 1780 bits (4610), Expect = 0.0
 Identities = 917/1406 (65%), Positives = 1083/1406 (77%), Gaps = 46/1406 (3%)
 Frame = -1

Query: 4088 MEDSSLPTTFEAKIKGIRFGLATRQEICKASVSDCPISHASQLSNPFLGLPLETGKCESC 3909
            ME+SS     +  I+GI FGLAT QEICK+S+SDCPI+H S L NPFLGLPLE G+CESC
Sbjct: 1    MEESSSSKVADGTIRGITFGLATPQEICKSSISDCPITHPSLLLNPFLGLPLEAGRCESC 60

Query: 3908 GTGEAGQCEGHFGYIELPTPIYHPDHVSEXXXXXXXXXXXXXXXXXXXXXXXXL--FERV 3735
            GT E GQCEGHFGYIELP PIYHPDHVSE                        +   ER+
Sbjct: 61   GTAEPGQCEGHFGYIELPIPIYHPDHVSELKKMLSLLCLKCLKMQNRKVQVKHVGVLERM 120

Query: 3734 MS-CHEEVSQISINEAKTTDGAYYLELKVPSRS-RLEEGFWNFLEKYGFRYGNMYNSRPL 3561
            +S C E+V QISINE KT+DGA YLELKVP  +  L +  WNFLEKYG+RYG+ Y SRP+
Sbjct: 121  LSSCCEDVVQISINEGKTSDGASYLELKVPKNAANLPD--WNFLEKYGYRYGDGY-SRPM 177

Query: 3560 LPSEVMAILKKVPQETRKKLSAKGYFPQDGYIIQHLPVPPNCLSVPDVSDGISTMSTDYS 3381
            LPSEV+ IL+++ +++RKKLSAKGYFPQDGYI+Q+LPVPPNCLSVPD+SDG + MS+D+S
Sbjct: 178  LPSEVLTILRRIHEDSRKKLSAKGYFPQDGYILQYLPVPPNCLSVPDISDGNNIMSSDHS 237

Query: 3380 ITXXXXXXXXXXXXKNSRSGMPNFESHEIEANELQAAVAHYLQFRGTGKASRDVDTRFGV 3201
            IT            K+SRSG+PNFE+HE+EAN+LQA+V  YLQFRGTGKASRDVD RFG 
Sbjct: 238  ITMLRKVLRQIDIIKSSRSGIPNFEAHEVEANDLQASVVQYLQFRGTGKASRDVDKRFGT 297

Query: 3200 NKEINASSTKAWLEKMKTLFIRKGSGFSSRSVITGDPFKGVSEIGLPFEIAQKITFEERV 3021
            NKE   ++TKAWLEKMKTLFIRKGSGFSSRSVITGDP+KGV EIGLP EIAQKITFEERV
Sbjct: 298  NKEAADTTTKAWLEKMKTLFIRKGSGFSSRSVITGDPYKGVGEIGLPCEIAQKITFEERV 357

Query: 3020 NQHNMEFLQKLVDDKLCLTYRDGQSTYSLREGSKGHTFLRHGQVVHRRIMDGDIVFINRP 2841
            +QHNM +LQKLVD+KLCLTY+DG STYSLREGSKGHTFLR GQ+VHRRIMDGD VF+NRP
Sbjct: 358  SQHNMAYLQKLVDEKLCLTYKDGSSTYSLREGSKGHTFLRPGQIVHRRIMDGDTVFVNRP 417

Query: 2840 PTTHKHSLQALSVYIHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLEAKAEVVELFSV 2661
            PTTHKHSLQALSVY+HDDHTVKINPLICGPLSADFDGDCIHLFYPQSL AKAEVVELFSV
Sbjct: 418  PTTHKHSLQALSVYVHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLAAKAEVVELFSV 477

Query: 2660 EKQLLSSHTGNFNLQLATDSLLSLKILFRKYFLSRAAAQQLAMFVPNMLSRPSVIK-SNS 2484
             KQLLSSHTGNFNLQLATDSLLSLK++F KYF  R AAQQLAMF+   L  P+++    S
Sbjct: 478  GKQLLSSHTGNFNLQLATDSLLSLKLMFSKYFFDREAAQQLAMFLQMALPDPALVDVRKS 537

Query: 2483 GPLWTASQILQMSLPPSFDCSGERHTISNSEVLSLDFNRDVMASIVNDIVTSLFFLKGPK 2304
            G +WTA QIL  +LP   D  GE HTI  S+ L +++N+D+++SI+ND++TS++F+KGP 
Sbjct: 538  GTMWTALQILGTALPDGLDSCGETHTIGKSQFLGIEYNKDLLSSILNDVITSIYFMKGPN 597

Query: 2303 EVLRFFNSIQSLLMESLYSEGFSVSLRDFFLPRDVLESIQENIQKISPLLYHLRSSYSES 2124
            +VL+FFNS+Q LLME+L +EGFSVSLRDF+  + V + IQE +Q +S LL+HLRSSY+ES
Sbjct: 598  DVLKFFNSLQPLLMENLCTEGFSVSLRDFYTSKAVRDGIQERVQCMSKLLHHLRSSYNES 657

Query: 2123 IALQLDSYLRSVKIPVTNFILKSSRIGHLIDSKSESALSKVVQQIGFLGMQLSDRGKFYS 1944
            + +QL+ +LR+ K+PV +F+ KSS IG LIDSKSESAL+KVVQQIGFLGMQ+SDRGKFYS
Sbjct: 658  VEVQLEHHLRNEKLPVIDFVHKSSGIGVLIDSKSESALNKVVQQIGFLGMQISDRGKFYS 717

Query: 1943 AILVKDMSSMFQKRYPSCDDYPAEEFGLVGRTLFRGLDPYQEMVHSISSREVIVRSTRGL 1764
              LV DM+ +FQK+YPS    P+EEFGLVG  LF GLDPYQEM+HSISSREVIVRSTRGL
Sbjct: 718  KTLVNDMARLFQKKYPSAGSNPSEEFGLVGSCLFYGLDPYQEMIHSISSREVIVRSTRGL 777

Query: 1763 TEPGTLFKNLMAILRDVVICYDGTVRNTCSNSIIQFEYGVN-SANIASEFCAGDPVGVLA 1587
            TEPGTLFKNLMAILRDV+ICYDGTVRN  SNSIIQFEYG +  +N  SEF AGDPVGVLA
Sbjct: 778  TEPGTLFKNLMAILRDVLICYDGTVRNVSSNSIIQFEYGASGGSNFPSEFGAGDPVGVLA 837

Query: 1586 ATAMSNPAYKAVLDXXXXXXXSWEMMKEILLCGVNFKNDTSDRRVILYLNNCDCGRKHCQ 1407
            ATAMSNPAYKAVLD       SWEMMKEILLCGV+FKND SDRRVILYLN+C C R  C+
Sbjct: 838  ATAMSNPAYKAVLDSSPSSNSSWEMMKEILLCGVSFKNDVSDRRVILYLNDCGCRRGCCR 897

Query: 1406 ENAALIVKNHLKKVSLKDTAIEFLIEYRSQMM---HEEGNPGPVGHIHLNKTLLIQSNIS 1236
            E AA +VKNHL KV LKD A EFLIEY  Q     + E   G +GHI LN+  L    IS
Sbjct: 898  EKAAYLVKNHLSKVCLKDAADEFLIEYGGQQAGYENSETGTGLIGHITLNQGQLENLGIS 957

Query: 1235 MHDILEKCQDAINIQQKKKKVANLFKNIDLXXXXXXXXXXXXXXKWTDVPCIQFCWREAK 1056
            + ++LE+CQ+ I+  Q++KK+ NLFK I L              K  + PC++F W +A 
Sbjct: 958  VLEVLERCQENISSFQRRKKIGNLFKRIVLSVSEFCSFCYNSGSKCLNTPCLRFSWPDAS 1017

Query: 1055 IDNLEKASHLLDDTVCPVLFQTIIKGDPRVSTANIVWISPDRASWIRSPSKGPKGELALD 876
             D+LE+ SH+L D +CP+L  T+IKGDPRVS+ANIVWISPD  +WIR+PSK   GELALD
Sbjct: 1018 DDHLERVSHILADMICPILLDTVIKGDPRVSSANIVWISPDTMTWIRNPSKSQSGELALD 1077

Query: 875  IILEKEAVKKSGDAWRVLMDCCLPIIHLVDTQRSIPYAIKQVDELLGISCAFEQAVQRLS 696
            I+LEKEAVK+ GDAWR+LMD CLP IHL+DT+RSIPYAIKQV EL+GISCAFEQAV+RLS
Sbjct: 1078 IVLEKEAVKQRGDAWRILMDSCLPFIHLIDTRRSIPYAIKQVQELIGISCAFEQAVKRLS 1137

Query: 695  TSVTMVTKGVLKDHLLLLANSMTCSGTFIGFNTGGIKSLSRSLGVQVPFMNATLFTPRKC 516
            TSVTMVTKGVLKDHL+LLANSMTC+G  IGFN GGIK+LSR+L VQ+PF  ATLFTPRKC
Sbjct: 1138 TSVTMVTKGVLKDHLVLLANSMTCAGNLIGFNAGGIKALSRALNVQIPFTEATLFTPRKC 1197

Query: 515  FERAAEKCHVDNLSSIVASCAWGKHVTVGTGSPFEILWNTGKAELRPNKEVDAYNFLHMV 336
            FERAAEKCHVD+LSSIVASC+WGKHV VGTGSPFE+LWNT   EL      D Y+FLH+V
Sbjct: 1198 FERAAEKCHVDSLSSIVASCSWGKHVAVGTGSPFEVLWNTKNVELNIPDAHDVYSFLHLV 1257

Query: 335  NSRSKPEDMGTSCLGAEIDDLDQENDFMEFDLSPVRESGLEKLTFEDGVEF--GLNGDDK 162
             S S  E  GTSCLGAE+++L+ E++ M   LSP R+SG +K TFED  EF  G+  ++ 
Sbjct: 1258 RSSSAQEVEGTSCLGAEVEELEVEDEDMGLYLSPDRDSGSDKPTFEDRAEFDNGIENENL 1317

Query: 161  D-----------------------------GFSKQDANEPD---SWGKKVNSEENDWMKI 78
            D                               +++  N+ D   SWG+KV+  EN+    
Sbjct: 1318 DEGKLSGSAWEKASSENVKSGGSWDMAKTQNGAEKAVNQSDSWSSWGRKVDEAENN---- 1373

Query: 77   GEQSTYAEETQDNSAWG---KKVDSD 9
              QS   E+ +  SAWG   K+VDS+
Sbjct: 1374 PRQSGNGEQLESWSAWGGKAKEVDSN 1399


>ref|XP_009802889.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase V subunit
            1 [Nicotiana sylvestris]
          Length = 2055

 Score = 1778 bits (4605), Expect = 0.0
 Identities = 916/1406 (65%), Positives = 1081/1406 (76%), Gaps = 46/1406 (3%)
 Frame = -1

Query: 4088 MEDSSLPTTFEAKIKGIRFGLATRQEICKASVSDCPISHASQLSNPFLGLPLETGKCESC 3909
            ME+SS     +  I GI FGLAT QEICK+S+SDCPI+H S L NPFLGLPLE G+CESC
Sbjct: 1    MEESSSSKVADGTISGITFGLATPQEICKSSISDCPITHPSLLLNPFLGLPLEAGRCESC 60

Query: 3908 GTGEAGQCEGHFGYIELPTPIYHPDHVSEXXXXXXXXXXXXXXXXXXXXXXXXL--FERV 3735
            GT E GQCEGHFGYIELP PIYHPDHVSE                        +   ER+
Sbjct: 61   GTAEPGQCEGHFGYIELPIPIYHPDHVSELKKMLSLLCLKCLKMKNRKVQVKHVGVLERM 120

Query: 3734 M-SCHEEVSQISINEAKTTDGAYYLELKVPSRS-RLEEGFWNFLEKYGFRYGNMYNSRPL 3561
            + SC E+V QISINE KT+DGA YLELKVP  +  L +  WNFLEKYG+RYG+ Y SRPL
Sbjct: 121  LPSCCEDVVQISINEGKTSDGASYLELKVPKNAANLPD--WNFLEKYGYRYGDGY-SRPL 177

Query: 3560 LPSEVMAILKKVPQETRKKLSAKGYFPQDGYIIQHLPVPPNCLSVPDVSDGISTMSTDYS 3381
            LPSEV+ IL+++ ++TRKKLSAKGYFPQDGYI+Q+LPVPPNCLSVPD+SDG + MS+D+S
Sbjct: 178  LPSEVLTILRRIHEDTRKKLSAKGYFPQDGYILQYLPVPPNCLSVPDISDGNNIMSSDHS 237

Query: 3380 ITXXXXXXXXXXXXKNSRSGMPNFESHEIEANELQAAVAHYLQFRGTGKASRDVDTRFGV 3201
            IT            K+SRSG+PNFE+HE+EAN+LQA+V  YLQFRGTGKASRDVD RFG 
Sbjct: 238  ITMLRKVLRQIDIIKSSRSGIPNFEAHEVEANDLQASVVQYLQFRGTGKASRDVDKRFGT 297

Query: 3200 NKEINASSTKAWLEKMKTLFIRKGSGFSSRSVITGDPFKGVSEIGLPFEIAQKITFEERV 3021
            NKE   ++TKAWLEKMKTLFIRKGSGFSSRSVITGDP+KGV EIGLP EIAQKITFEE V
Sbjct: 298  NKEAADTTTKAWLEKMKTLFIRKGSGFSSRSVITGDPYKGVGEIGLPCEIAQKITFEETV 357

Query: 3020 NQHNMEFLQKLVDDKLCLTYRDGQSTYSLREGSKGHTFLRHGQVVHRRIMDGDIVFINRP 2841
            +QHNM +LQKLVD+KLCLTY+DG STYSLREGSKGHTFLR GQ+VHRRIMDGD VF+NRP
Sbjct: 358  SQHNMAYLQKLVDEKLCLTYKDGSSTYSLREGSKGHTFLRPGQIVHRRIMDGDTVFVNRP 417

Query: 2840 PTTHKHSLQALSVYIHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLEAKAEVVELFSV 2661
            PTTHKHSLQALSVY+HDDHTVKINPLICGPLSADFDGDCIHLFYPQSL AKAEVVELFSV
Sbjct: 418  PTTHKHSLQALSVYVHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLAAKAEVVELFSV 477

Query: 2660 EKQLLSSHTGNFNLQLATDSLLSLKILFRKYFLSRAAAQQLAMFVPNMLSRPSVIK-SNS 2484
             KQLLSSHTGNFNLQLATDSLLSLK++F KYF  R AAQQLAMF+   L  P+++    S
Sbjct: 478  GKQLLSSHTGNFNLQLATDSLLSLKLMFSKYFFDREAAQQLAMFLQMALPDPALVDVRKS 537

Query: 2483 GPLWTASQILQMSLPPSFDCSGERHTISNSEVLSLDFNRDVMASIVNDIVTSLFFLKGPK 2304
            G +WTA QIL  +LP   D  GE HTI  S+ L +++N+D+++SI+ND++TS++F+KGP 
Sbjct: 538  GTMWTALQILGTALPDGLDSCGETHTIGKSQFLGIEYNKDLLSSILNDVITSIYFMKGPN 597

Query: 2303 EVLRFFNSIQSLLMESLYSEGFSVSLRDFFLPRDVLESIQENIQKISPLLYHLRSSYSES 2124
            +VL+FFNS+Q LLME+L +EGFSVSLRDF+  + V + IQE +Q +S LL+HLRSSY+ES
Sbjct: 598  DVLKFFNSLQPLLMENLCTEGFSVSLRDFYTSKAVRDGIQERVQCMSKLLHHLRSSYNES 657

Query: 2123 IALQLDSYLRSVKIPVTNFILKSSRIGHLIDSKSESALSKVVQQIGFLGMQLSDRGKFYS 1944
            + +QL+ +LR+ K+PV +F+ KSS IG LIDSKSESAL+KVVQQIGFLGMQ+SDRGKFYS
Sbjct: 658  VEVQLEHHLRNEKLPVIDFVHKSSGIGVLIDSKSESALNKVVQQIGFLGMQISDRGKFYS 717

Query: 1943 AILVKDMSSMFQKRYPSCDDYPAEEFGLVGRTLFRGLDPYQEMVHSISSREVIVRSTRGL 1764
              LV DM+ +FQK+YPS    P+EEFGLVG  LF GLDPYQEM+HSISSREVIVRSTRGL
Sbjct: 718  KTLVNDMARLFQKKYPSAGSNPSEEFGLVGSCLFYGLDPYQEMIHSISSREVIVRSTRGL 777

Query: 1763 TEPGTLFKNLMAILRDVVICYDGTVRNTCSNSIIQFEYGVN-SANIASEFCAGDPVGVLA 1587
            TEPGTLFKNLMAILRDV+ICYDGTVRN  SNSIIQFEYG +  +N  SEF AGDPVGVLA
Sbjct: 778  TEPGTLFKNLMAILRDVLICYDGTVRNVSSNSIIQFEYGASGGSNFPSEFGAGDPVGVLA 837

Query: 1586 ATAMSNPAYKAVLDXXXXXXXSWEMMKEILLCGVNFKNDTSDRRVILYLNNCDCGRKHCQ 1407
            ATAMSNPAYKAVLD       SWEMMKEILLCGV+FKND SDRRVILYLN+C C R  C+
Sbjct: 838  ATAMSNPAYKAVLDSSPSSNSSWEMMKEILLCGVSFKNDVSDRRVILYLNDCGCRRGCCR 897

Query: 1406 ENAALIVKNHLKKVSLKDTAIEFLIEYRSQMM---HEEGNPGPVGHIHLNKTLLIQSNIS 1236
            E AA ++KNHL KV LKD A EFLIEY  Q     + E   G VGHI LN+  L    IS
Sbjct: 898  EKAAYLIKNHLSKVCLKDAADEFLIEYGGQQAGYENSETGTGLVGHITLNQGQLENLGIS 957

Query: 1235 MHDILEKCQDAINIQQKKKKVANLFKNIDLXXXXXXXXXXXXXXKWTDVPCIQFCWREAK 1056
            + ++LE+CQ+ I+  Q++KK+ NLFK I L              K  + PC++F W +A 
Sbjct: 958  VLEVLERCQENISSFQRRKKIGNLFKRIVLSASAFCSFCYNSGSKCLNTPCLRFSWPDAS 1017

Query: 1055 IDNLEKASHLLDDTVCPVLFQTIIKGDPRVSTANIVWISPDRASWIRSPSKGPKGELALD 876
             D+LE+ SH+L D +CP+L  T+IKGDPRVS+ANIVW+SPD  +WIR+PSK   GELALD
Sbjct: 1018 DDHLERVSHILADMICPILLDTVIKGDPRVSSANIVWVSPDTMTWIRNPSKSQSGELALD 1077

Query: 875  IILEKEAVKKSGDAWRVLMDCCLPIIHLVDTQRSIPYAIKQVDELLGISCAFEQAVQRLS 696
            I+LEKEAVK+ GDAWR+LMD CLP IHL+DT+RSIPYAIKQV EL+GISCAFEQAV+RLS
Sbjct: 1078 IVLEKEAVKQRGDAWRILMDSCLPFIHLIDTRRSIPYAIKQVQELIGISCAFEQAVKRLS 1137

Query: 695  TSVTMVTKGVLKDHLLLLANSMTCSGTFIGFNTGGIKSLSRSLGVQVPFMNATLFTPRKC 516
            TSVTMVTKGVLKDHL+LLANSMTC+G  IGFN GGIK+LSRSL +Q+PF  ATLFTPRKC
Sbjct: 1138 TSVTMVTKGVLKDHLVLLANSMTCAGNLIGFNAGGIKALSRSLNMQIPFTEATLFTPRKC 1197

Query: 515  FERAAEKCHVDNLSSIVASCAWGKHVTVGTGSPFEILWNTGKAELRPNKEVDAYNFLHMV 336
            FERAAEKCHVD+LSSIVASC+WGKHV VGTGSPFE++WNT   EL      D Y+FLH+V
Sbjct: 1198 FERAAEKCHVDSLSSIVASCSWGKHVAVGTGSPFEVIWNTKNVELNIPDAHDVYSFLHLV 1257

Query: 335  NSRSKPEDMGTSCLGAEIDDLDQENDFMEFDLSPVRESGLEKLTFEDGVEF--GLNGDDK 162
             S S  E  GTSCLGAE+++L+ E++ M   LSP R+SG +K TFED  EF  G+  ++ 
Sbjct: 1258 RSSSAQEVEGTSCLGAEVEELEVEDEDMGLYLSPDRDSGSDKPTFEDRAEFDNGIENENL 1317

Query: 161  D-----------------------------GFSKQDANEPD---SWGKKVNSEENDWMKI 78
            D                               +++  N+ D   SWG+KV+  EN+    
Sbjct: 1318 DEGKLSGSAWEKASSENVKSGGSWDMAKTQNGAEKAVNQSDSWSSWGRKVDDAENN---- 1373

Query: 77   GEQSTYAEETQDNSAWG---KKVDSD 9
              QS   E+ +  SAWG   K+VDS+
Sbjct: 1374 PRQSGNGEQLESWSAWGGKAKEVDSN 1399


>ref|XP_015056787.1| PREDICTED: DNA-directed RNA polymerase V subunit 1-like [Solanum
            pennellii] gi|970001136|ref|XP_015056795.1| PREDICTED:
            DNA-directed RNA polymerase V subunit 1-like [Solanum
            pennellii]
          Length = 2044

 Score = 1773 bits (4592), Expect = 0.0
 Identities = 919/1419 (64%), Positives = 1084/1419 (76%), Gaps = 57/1419 (4%)
 Frame = -1

Query: 4088 MEDSSLPTTF-EAKIKGIRFGLATRQEICKASVSDCPISHASQLSNPFLGLPLETGKCES 3912
            ME+ SL +   +  +K I+FGLAT QEICK+S+SDCPI+H S L NPFLGLPLE G+CES
Sbjct: 1    MEEKSLSSKVSDGIVKRIKFGLATPQEICKSSISDCPITHPSLLLNPFLGLPLEAGRCES 60

Query: 3911 CGTGEAGQCEGHFGYIELPTPIYHPDHVSEXXXXXXXXXXXXXXXXXXXXXXXXL--FER 3738
            CGT E GQCEGHFGYIELP PIYHPDHVSE                            ER
Sbjct: 61   CGTAEPGQCEGHFGYIELPIPIYHPDHVSELKKMLSLLCLKCLKMKNRKFQVKNAGVLER 120

Query: 3737 VMS-CHEEVSQISINEAKTTDGAYYLELKVPSRS-RLEEGFWNFLEKYGFRYGNMYNSRP 3564
            ++S C E+VSQ+S+ E KT+DGA YLELKVP  + +L+E  WNFLEKYG+RYG+ Y SRP
Sbjct: 121  MLSSCCEDVSQVSVYEGKTSDGASYLELKVPKNAAKLQE--WNFLEKYGYRYGDGY-SRP 177

Query: 3563 LLPSEVMAILKKVPQETRKKLSAKGYFPQDGYIIQHLPVPPNCLSVPDVSDGISTMSTDY 3384
            LLPSEV+AIL+++ ++TRKKLSAKGYFPQ+GYI+Q+LPVPPNCLSVPD+SDG + MS+D+
Sbjct: 178  LLPSEVLAILRRIREDTRKKLSAKGYFPQEGYILQYLPVPPNCLSVPDISDGNNIMSSDH 237

Query: 3383 SITXXXXXXXXXXXXKNSRSGMPNFESHEIEANELQAAVAHYLQFRGTGKASRDVDTRFG 3204
            SIT            K+SRSG PNFE+HE+EAN+LQAAV  YLQFRGTGKASRDVD RFG
Sbjct: 238  SITMLRKVLRQIDIIKSSRSGTPNFEAHEVEANDLQAAVVQYLQFRGTGKASRDVDKRFG 297

Query: 3203 VNKEINASSTKAWLEKMKTLFIRKGSGFSSRSVITGDPFKGVSEIGLPFEIAQKITFEER 3024
            ++KE   ++TKAWLEKMKTLFIRKGSGFSSRSVITGDP+KGV EIGLP EIAQKITFEER
Sbjct: 298  IHKEAADTTTKAWLEKMKTLFIRKGSGFSSRSVITGDPYKGVGEIGLPCEIAQKITFEER 357

Query: 3023 VNQHNMEFLQKLVDDKLCLTYRDGQSTYSLREGSKGHTFLRHGQVVHRRIMDGDIVFINR 2844
            V+QHNM +LQKLVD+KLCLTY+DG STYSLREGSKGHTFLR GQ+VHRRIMDGD VFINR
Sbjct: 358  VSQHNMAYLQKLVDEKLCLTYKDGSSTYSLREGSKGHTFLRPGQIVHRRIMDGDTVFINR 417

Query: 2843 PPTTHKHSLQALSVYIHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLEAKAEVVELFS 2664
            PPTTHKHSLQALSVY+HDDHTVKINPL+CGPLSADFDGDCIHLFYPQSL AKAEV+ELF+
Sbjct: 418  PPTTHKHSLQALSVYVHDDHTVKINPLMCGPLSADFDGDCIHLFYPQSLSAKAEVLELFA 477

Query: 2663 VEKQLLSSHTGNFNLQLATDSLLSLKILFRKYFLSRAAAQQLAMFVPNMLSRPSVIK-SN 2487
            V KQLLSSHTGNFNLQLATDSLLSLK++F  YF  +AAAQQLAMF+P  L   +V+    
Sbjct: 478  VGKQLLSSHTGNFNLQLATDSLLSLKLMFSHYFFDKAAAQQLAMFLPMALPDSAVVDVRK 537

Query: 2486 SGPLWTASQILQMSLPPSFDCSGERHTISNSEVLSLDFNRDVMASIVNDIVTSLFFLKGP 2307
            SG +WT  QIL  +LP  FD  GE HTI  S+ L +D++RD+++SI+ND++TS++F+KGP
Sbjct: 538  SGAMWTTLQILGAALPDGFDSCGETHTIGKSQFLGIDYHRDLISSILNDVITSIYFMKGP 597

Query: 2306 KEVLRFFNSIQSLLMESLYSEGFSVSLRDFFLPRDVLESIQENIQKISPLLYHLRSSYSE 2127
             +VL+FFNS+Q LLME+L +EGFS+SLRDF++ + V + IQE IQ +S LL+HLRSSY+E
Sbjct: 598  NDVLKFFNSLQPLLMENLCTEGFSISLRDFYMTKAVRDGIQERIQCMSKLLHHLRSSYNE 657

Query: 2126 SIALQLDSYLRSVKIPVTNFILKSSRIGHLIDSKSESALSKVVQQIGFLGMQLSDRGKFY 1947
            S+ +QL+ +LR+ K+PV +F+LKSS +G LIDSKSESA +KVVQQIGFLG+Q+SDRGKFY
Sbjct: 658  SVEVQLEHHLRNEKLPVIDFVLKSSGMGVLIDSKSESAFNKVVQQIGFLGLQISDRGKFY 717

Query: 1946 SAILVKDMSSMFQKRYPSCDDYPAEEFGLVGRTLFRGLDPYQEMVHSISSREVIVRSTRG 1767
            +  LV DM+ +FQK+YPS    P+EEFGLV   LF GLDPYQ M+HSISSREVIVRSTRG
Sbjct: 718  TKTLVHDMAQLFQKKYPSVGTNPSEEFGLVRSCLFYGLDPYQGMIHSISSREVIVRSTRG 777

Query: 1766 LTEPGTLFKNLMAILRDVVICYDGTVRNTCSNSIIQFEYGVN-SANIASEFCAGDPVGVL 1590
            LTEPGTLFKNLMAILRDVVICYDGTVRN  SNSIIQFEYG +  +N+ SEFCAGDPVGVL
Sbjct: 778  LTEPGTLFKNLMAILRDVVICYDGTVRNVSSNSIIQFEYGSSGGSNLPSEFCAGDPVGVL 837

Query: 1589 AATAMSNPAYKAVLDXXXXXXXSWEMMKEILLCGVNFKNDTSDRRVILYLNNCDCGRKHC 1410
            AATAMSNPAYKAVLD       SWEMMKEILLCGV+FKND SDRRVILYLN+C C R +C
Sbjct: 838  AATAMSNPAYKAVLDSSPSSNSSWEMMKEILLCGVSFKNDVSDRRVILYLNDCGCRRGYC 897

Query: 1409 QENAALIVKNHLKKVSLKDTAIEFLIEYRSQMM---HEEGNPGPVGHIHLNKTLLIQSNI 1239
            +E AA +VKNHL KV LKD A EFLIEY  +     + E   G +GHI LN+  L    I
Sbjct: 898  REKAAYVVKNHLSKVCLKDAADEFLIEYAGRQAGYENSETGTGLIGHIRLNQGQLENLGI 957

Query: 1238 SMHDILEKCQDAINIQQKKKKVANLFKNIDLXXXXXXXXXXXXXXKWTDVPCIQFCWREA 1059
            S+ ++ E+CQ+ I+  QKKKK+ NLFK I L              K  + PC++F W +A
Sbjct: 958  SVLEVHERCQENISSFQKKKKIGNLFKRIVLSVSEFCSFCHNSGSKCLNAPCLRFSWPDA 1017

Query: 1058 KIDNLEKASHLLDDTVCPVLFQTIIKGDPRVSTANIVWISPDRASWIRSPSKGPKGELAL 879
              D+LE+ SH+L D +CP+L  T+IKGDPRVS+ANI WISPD  SWIRSPSK  +GELAL
Sbjct: 1018 SDDHLERVSHILADMICPILLDTVIKGDPRVSSANIAWISPDTMSWIRSPSKSQRGELAL 1077

Query: 878  DIILEKEAVKKSGDAWRVLMDCCLPIIHLVDTQRSIPYAIKQVDELLGISCAFEQAVQRL 699
            DI+LEKEAVK+ GDAWR+LMD CLP+IHL+DT RSIPYAIKQV EL+GISCAFEQAV+RL
Sbjct: 1078 DIVLEKEAVKQRGDAWRILMDSCLPVIHLIDTTRSIPYAIKQVQELIGISCAFEQAVKRL 1137

Query: 698  STSVTMVTKGVLKDHLLLLANSMTCSGTFIGFNTGGIKSLSRSLGVQVPFMNATLFTPRK 519
            STSVTMVTKGVLKDHL+LLANSMTC+G  +GFN GGIK+LSRSL VQ+PF  ATLFTPRK
Sbjct: 1138 STSVTMVTKGVLKDHLVLLANSMTCAGNLVGFNAGGIKALSRSLNVQIPFTEATLFTPRK 1197

Query: 518  CFERAAEKCHVDNLSSIVASCAWGKHVTVGTGSPFEILWNTGKAELRPNKEVDAYNFLHM 339
            CFERAAEKCHVD+LSSIVASC+WGKHV VGTGS FE+L NT   E       D Y+FLH+
Sbjct: 1198 CFERAAEKCHVDSLSSIVASCSWGKHVAVGTGSRFEVLLNTRNVEWNIPDTRDVYSFLHL 1257

Query: 338  VNSRSKPEDMGTSCLGAEIDDLDQENDFMEFDLSPVRESGLEKLTFEDGVEFGLN----- 174
            V S S  E  GTSCLGAEID+L+ + D M   LSP R+SG E  TFED  EF  N     
Sbjct: 1258 VRSTSAQEVEGTSCLGAEIDELEDDED-MGLYLSPNRDSGSEMPTFEDRAEFDYNENLDE 1316

Query: 173  -------------GDDKDGFS-----------KQDANEPDS---WGKKVN---------- 105
                         G  K G S           ++  N+ DS   WGKKV+          
Sbjct: 1317 GKPSGSAWEKASSGSVKSGGSWDMAGKTQNGAEEGVNQSDSWSAWGKKVDGSNPQQSGVT 1376

Query: 104  SEENDWMKIGEQ---STYAE--ETQDNSAWGKKVDSDGG 3
             +   W K GE    S++ +  ET   S+WGKK + DGG
Sbjct: 1377 EQSESWGKKGETDGGSSWGKKGETDVGSSWGKKAEMDGG 1415


>ref|XP_010315461.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase V subunit
            1 [Solanum lycopersicum]
          Length = 1968

 Score = 1772 bits (4589), Expect = 0.0
 Identities = 909/1372 (66%), Positives = 1071/1372 (78%), Gaps = 14/1372 (1%)
 Frame = -1

Query: 4088 MEDSSLPTTF-EAKIKGIRFGLATRQEICKASVSDCPISHASQLSNPFLGLPLETGKCES 3912
            ME+ SL +   +  +K I+FGLAT QEICK+S+SDCPI+H S L NPFLGLPLE G+CES
Sbjct: 1    MEEKSLSSKVSDGIVKRIKFGLATPQEICKSSISDCPITHPSLLLNPFLGLPLEAGRCES 60

Query: 3911 CGTGEAGQCEGHFGYIELPTPIYHPDHVSEXXXXXXXXXXXXXXXXXXXXXXXXL--FER 3738
            CGT E GQCEGHFGYIELP PIYHPDHVSE                            ER
Sbjct: 61   CGTAEPGQCEGHFGYIELPIPIYHPDHVSELKKMLSLLCLKCLKMKNRKFQVKNAGVLER 120

Query: 3737 VMS-CHEEVSQISINEAKTTDGAYYLELKVPSRS-RLEEGFWNFLEKYGFRYGNMYNSRP 3564
            ++S C E+VSQ+S+ E KT+DGA YLELKVP  + +L+E  WNFLEKYG+RYG+ Y SRP
Sbjct: 121  MLSSCCEDVSQVSVYEGKTSDGASYLELKVPKNAAKLQE--WNFLEKYGYRYGDGY-SRP 177

Query: 3563 LLPSEVMAILKKVPQETRKKLSAKGYFPQDGYIIQHLPVPPNCLSVPDVSDGISTMSTDY 3384
            LLPSEV+AIL+++ ++TRKKLSAKGYFPQ+GYI+Q+LPVPPNCLSVPD+SDG + MS+D+
Sbjct: 178  LLPSEVLAILRRIREDTRKKLSAKGYFPQEGYILQYLPVPPNCLSVPDISDGNNIMSSDH 237

Query: 3383 SITXXXXXXXXXXXXKNSRSGMPNFESHEIEANELQAAVAHYLQFRGTGKASRDVDTRFG 3204
            SIT            K+SRSG PNFE+HE+EAN+LQAAV  YLQFRGTGKASRDVD RFG
Sbjct: 238  SITMLRKVLRQIDIIKSSRSGTPNFEAHEVEANDLQAAVVQYLQFRGTGKASRDVDKRFG 297

Query: 3203 VNKEINASSTKAWLEKMKTLFIRKGSGFSSRSVITGDPFKGVSEIGLPFEIAQKITFEER 3024
            ++KE   ++TKAWLEKMKTLFIRKGSGFSSRSVITGDP+KGV EIGLP EIAQKITFEER
Sbjct: 298  IHKEAADTTTKAWLEKMKTLFIRKGSGFSSRSVITGDPYKGVGEIGLPCEIAQKITFEER 357

Query: 3023 VNQHNMEFLQKLVDDKLCLTYRDGQSTYSLREGSKGHTFLRHGQVVHRRIMDGDIVFINR 2844
            V+QHNM +LQKLVD+KLCLTY+DG STYSLREGSKGHTFLR GQ+VHRRIMDGD VFINR
Sbjct: 358  VSQHNMAYLQKLVDEKLCLTYKDGSSTYSLREGSKGHTFLRPGQIVHRRIMDGDTVFINR 417

Query: 2843 PPTTHKHSLQALSVYIHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLEAKAEVVELFS 2664
            PPTTHKHSLQALSVY+HDDHTVKINPL+CGPLSADFDGDCIHLFYPQSL AKAEV+ELF+
Sbjct: 418  PPTTHKHSLQALSVYVHDDHTVKINPLMCGPLSADFDGDCIHLFYPQSLSAKAEVLELFA 477

Query: 2663 VEKQLLSSHTGNFNLQLATDSLLSLKILFRKYFLSRAAAQQLAMFVPNMLSRPSVIK-SN 2487
            V KQLLSSHTGNFNLQLATDSLLSLK++F  YF  +AAAQQLAMF+P  L   +V+    
Sbjct: 478  VGKQLLSSHTGNFNLQLATDSLLSLKLMFSHYFFDKAAAQQLAMFLPMALPDSAVVDVRK 537

Query: 2486 SGPLWTASQILQMSLPPSFDCSGERHTISNSEVLSLDFNRDVMASIVNDIVTSLFFLKGP 2307
            SG +WT  QIL  +LP  FD  GE HTI  S+ L +D++RD+++SI+ND++TS++F+KGP
Sbjct: 538  SGAMWTTLQILGAALPDGFDSCGETHTIGKSQFLGIDYHRDLISSILNDVITSIYFMKGP 597

Query: 2306 KEVLRFFNSIQSLLMESLYSEGFSVSLRDFFLPRDVLESIQENIQKISPLLYHLRSSYSE 2127
             +VL+FFNS+Q LLME+L +EGFS+SLRDF++ + V + IQE IQ +S LL+HLRSSY+E
Sbjct: 598  NDVLKFFNSLQPLLMENLCTEGFSISLRDFYMTKAVRDGIQERIQCMSKLLHHLRSSYNE 657

Query: 2126 SIALQLDSYLRSVKIPVTNFILKSSRIGHLIDSKSESALSKVVQQIGFLGMQLSDRGKFY 1947
            S+ +QL+ +LR+ K+PV +F+LKSS +G LIDSKSESA +KVVQQIGFLG+Q+SDRGKFY
Sbjct: 658  SVEVQLEHHLRNEKLPVIDFVLKSSGMGVLIDSKSESAFNKVVQQIGFLGLQISDRGKFY 717

Query: 1946 SAILVKDMSSMFQKRYPSCDDYPAEEFGLVGRTLFRGLDPYQEMVHSISSREVIVRSTRG 1767
            +  LV DM+ +FQK+YPS    P+EEFGLV   LF GLDPYQ M+HSISSREVIVRSTRG
Sbjct: 718  TKTLVHDMAQLFQKKYPSVGTNPSEEFGLVRSCLFYGLDPYQGMIHSISSREVIVRSTRG 777

Query: 1766 LTEPGTLFKNLMAILRDVVICYDGTVRNTCSNSIIQFEYGVN-SANIASEFCAGDPVGVL 1590
            LTEPGTLFKNLMAILRDVVICYDGTVRN  SNSIIQFEYG +  +N+ SEFCAGDPVGVL
Sbjct: 778  LTEPGTLFKNLMAILRDVVICYDGTVRNVSSNSIIQFEYGSSGGSNLPSEFCAGDPVGVL 837

Query: 1589 AATAMSNPAYKAVLDXXXXXXXSWEMMKEILLCGVNFKNDTSDRRVILYLNNCDCGRKHC 1410
            AATAMSNPAYKAVLD       SWEMMKEILLCGV+FKND SDRRVILYLN+C C R +C
Sbjct: 838  AATAMSNPAYKAVLDSSPSSNSSWEMMKEILLCGVSFKNDVSDRRVILYLNDCGCRRGYC 897

Query: 1409 QENAALIVKNHLKKVSLKDTAIEFLIEYRSQMM---HEEGNPGPVGHIHLNKTLLIQSNI 1239
            +E AA +VKNHL KV LKD A EFLIEY  +     + E   G +GHI LN+  L    I
Sbjct: 898  REKAAYVVKNHLSKVCLKDAADEFLIEYAGRQAGYENSETGTGLIGHIRLNQGQLENLGI 957

Query: 1238 SMHDILEKCQDAINIQQKKKKVANLFKNIDLXXXXXXXXXXXXXXKWTDVPCIQFCWREA 1059
            S+ ++ E+CQ+ I+  QKKKK+ NLFK I L              K  + PC++F W +A
Sbjct: 958  SVLEVHERCQENISSFQKKKKIGNLFKRIVLSVSEFCSFCHNSGSKCLNAPCLRFSWPDA 1017

Query: 1058 KIDNLEKASHLLDDTVCPVLFQTIIKGDPRVSTANIVWISPDRASWIRSPSKGPKGELAL 879
              D+LE+ SH+L D +CP+L  T+IKGDPRVS+ANI WISPD  SWIRSPSK  +GELAL
Sbjct: 1018 SDDHLERVSHILADMICPILLDTVIKGDPRVSSANIAWISPDTMSWIRSPSKSQRGELAL 1077

Query: 878  DIILEKEAVKKSGDAWRVLMDCCLPIIHLVDTQRSIPYAIKQVDELLGISCAFEQAVQRL 699
            DI+LEKEAVK+ GDAWR+LMD CLP+IHL+DT RSIPYAIKQV EL+GISCAFEQAV+RL
Sbjct: 1078 DIVLEKEAVKQRGDAWRILMDSCLPVIHLIDTTRSIPYAIKQVQELIGISCAFEQAVKRL 1137

Query: 698  STSVTMVTKGVLKDHLLLLANSMTCSGTFIGFNTGGIKSLSRSLGVQVPFMNATLFTPRK 519
            STSVTMVTKGVLKDHL+LLANSMTC+G  +GFN GGIK+LSRSL VQ+PF  ATLFTPRK
Sbjct: 1138 STSVTMVTKGVLKDHLVLLANSMTCAGNLVGFNAGGIKALSRSLNVQIPFTEATLFTPRK 1197

Query: 518  CFERAAEKCHVDNLSSIVASCAWGKHVTVGTGSPFEILWNTGKAELRPNKEVDAYNFLHM 339
            CFERAAEKCHVD+LSSIVASC+WGKHV VGTGS FE+L NT   E       D Y+FLH+
Sbjct: 1198 CFERAAEKCHVDSLSSIVASCSWGKHVAVGTGSRFEVLLNTRNVEWNIPDTRDVYSFLHL 1257

Query: 338  VNSRSKPEDMGTSCLGAEIDDLDQENDFMEFDLSPVRESGLEKLTFEDGVEFGLNGDDKD 159
            V + S  E  GTSCLGAEID+L+++ D M   LSP R+SG E  TFED  EF  N +  +
Sbjct: 1258 VRNTSAQEVEGTSCLGAEIDELEEDED-MGLYLSPNRDSGSEMPTFEDRAEFDYNENLDE 1316

Query: 158  GFSKQDANEPDSWGKKVNSEENDWMKIGEQSTYAEE----TQDNSAWGKKVD 15
            G     A E  S G   +     W   G+    AEE    +   SAWGKKVD
Sbjct: 1317 GKPSGSAWEKASSGSVKSG--GSWDMAGKTQNGAEEGVNQSDSWSAWGKKVD 1366


>ref|XP_002265533.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Vitis vinifera]
            gi|731435545|ref|XP_010645605.1| PREDICTED: DNA-directed
            RNA polymerase V subunit 1 [Vitis vinifera]
          Length = 1830

 Score = 1733 bits (4487), Expect = 0.0
 Identities = 879/1376 (63%), Positives = 1061/1376 (77%), Gaps = 23/1376 (1%)
 Frame = -1

Query: 4085 EDSSLPTTFEAKIKGIRFGLATRQEICKASVSDCPISHASQLSNPFLGLPLETGKCESCG 3906
            EDSS  T  + +I GIRFGLATRQEIC ASVSDCPISHASQL+NPFLGLPLE GKCESCG
Sbjct: 3    EDSS--TILDGEISGIRFGLATRQEICIASVSDCPISHASQLTNPFLGLPLEFGKCESCG 60

Query: 3905 TGEAGQCEGHFGYIELPTPIYHPDHVSEXXXXXXXXXXXXXXXXXXXXXXXXLFERVMS- 3729
            T E GQCEGHFGYIELP PIYHP HVSE                        + E++++ 
Sbjct: 61   TAEPGQCEGHFGYIELPIPIYHPGHVSELKRMLSLLCLKCLKIRKSKVTNNGITEQLLAP 120

Query: 3728 CHEEVSQISINEAKTTDGAYYLELKVPSRSRLEEGFWNFLEKYGFRYGNMYNSRPLLPSE 3549
            C ++  Q+S+ E + T+GA +LELK+PSRSR ++GFW+FL +YG+RYG+   SR LLPSE
Sbjct: 121  CCQDSPQVSVREFRPTEGACFLELKIPSRSRPKDGFWDFLARYGYRYGHNL-SRILLPSE 179

Query: 3548 VMAILKKVPQETRKKLSAKGYFPQDGYIIQHLPVPPNCLSVPDVSDGISTMSTDYSITXX 3369
            VM IL+++P++TRKKL  KGYFPQDGYI+Q+LPVPPNCLSVPD+SDG+S MS+D S++  
Sbjct: 180  VMEILRRIPEDTRKKLVRKGYFPQDGYILQYLPVPPNCLSVPDISDGVSIMSSDLSVSML 239

Query: 3368 XXXXXXXXXXKNSRSGMPNFESHEIEANELQAAVAHYLQFRGTGKASRDVDTRFGVNKEI 3189
                      K SRSG PNFESH+IEAN LQ+++  YL+ RGT K SR +DTRFG +KE 
Sbjct: 240  KKVLKQIEVIKGSRSGEPNFESHKIEANNLQSSIEQYLEVRGTAKTSRSLDTRFGSSKEP 299

Query: 3188 NASSTKAWLEKMKTLFIRKGSGFSSRSVITGDPFKGVSEIGLPFEIAQKITFEERVNQHN 3009
            N SSTKAWLEKM+TLFIRKGSGFSSRSVITGD +K V+EIGLPFEIAQ+ITFEERVN HN
Sbjct: 300  NESSTKAWLEKMRTLFIRKGSGFSSRSVITGDAYKRVNEIGLPFEIAQRITFEERVNVHN 359

Query: 3008 MEFLQKLVDDKLCLTYRDGQSTYSLREGSKGHTFLRHGQVVHRRIMDGDIVFINRPPTTH 2829
            M+ LQ LVD+KLCLTYRDG STYSLREGSKGHTFLR GQVVHRRIMDGDIVFINRPPTTH
Sbjct: 360  MKHLQNLVDEKLCLTYRDGLSTYSLREGSKGHTFLRPGQVVHRRIMDGDIVFINRPPTTH 419

Query: 2828 KHSLQALSVYIHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLEAKAEVVELFSVEKQL 2649
            KHSLQALSVY+HDDHTVKINPLICGPLSADFDGDC+HLFYPQSL AKAEV+ELFSVEKQL
Sbjct: 420  KHSLQALSVYVHDDHTVKINPLICGPLSADFDGDCVHLFYPQSLGAKAEVLELFSVEKQL 479

Query: 2648 LSSHTGNFNLQLATDSLLSLKILFRKYFLSRAAAQQLAMFVPNMLSRPSVIKSN-SGPLW 2472
            LSSH+GN NLQLATDSLLSLK+LF +YFL++AAAQQL MFV   L RP+++KS  SGP W
Sbjct: 480  LSSHSGNLNLQLATDSLLSLKVLFERYFLNKAAAQQLVMFVSMSLPRPALLKSPCSGPCW 539

Query: 2471 TASQILQMSLPPSFDCSGERHTISNSEVLSLDFNRDVMASIVNDIVTSLFFLKGPKEVLR 2292
            TA QILQ +LP  FDC GERH IS S +L +D+NRDV+ S+VN+IVTS+F  KGP EVL+
Sbjct: 540  TALQILQTALPSYFDCIGERHWISKSAILKVDYNRDVLQSLVNEIVTSIFSEKGPNEVLK 599

Query: 2291 FFNSIQSLLMESLYSEGFSVSLRDFFLPRDVLESIQENIQKISPLLYHLRSSYSESIALQ 2112
            FF+S+Q LLME+L+SEGFSVSL DF +P +V ++IQ+N++ IS LLY+LRS Y+E + LQ
Sbjct: 600  FFDSLQPLLMENLFSEGFSVSLEDFSIPSEVTQNIQKNVEDISSLLYNLRSMYNELLQLQ 659

Query: 2111 LDSYLRSVKIPVTNFILKSSRIGHLIDSKSESALSKVVQQIGFLGMQLSDRGKFYSAILV 1932
             +++LR  K+PV NFIL SS +G+LIDSKS+SA++KVVQQIGFLG QLS++GKFYS  LV
Sbjct: 660  AENHLRLTKVPVANFILNSSALGNLIDSKSDSAINKVVQQIGFLGQQLSEKGKFYSRTLV 719

Query: 1931 KDMSSMFQKRYP-SCDDYPAEEFGLVGRTLFRGLDPYQEMVHSISSREVIVRSTRGLTEP 1755
            + M+ +F+ +YP    DYP+ EFGL+    F GLDPY+EMVHSIS+RE+IVRS+RGL+EP
Sbjct: 720  EGMAYLFKSKYPFHGADYPSGEFGLIRSCFFHGLDPYEEMVHSISTREIIVRSSRGLSEP 779

Query: 1754 GTLFKNLMAILRDVVICYDGTVRNTCSNSIIQFEYGVNSANIASEFC-AGDPVGVLAATA 1578
            GTLFKNLMAILRDVVICYDGTVRN CSNSIIQFEYGV +      F  AG+PVGVLAATA
Sbjct: 780  GTLFKNLMAILRDVVICYDGTVRNVCSNSIIQFEYGVKARTKPQHFFPAGEPVGVLAATA 839

Query: 1577 MSNPAYKAVLDXXXXXXXSWEMMKEILLCGVNFKNDTSDRRVILYLNNCDCGRKHCQENA 1398
            MSNPAYKAVLD       SWE+MKEILLC VNFKND  DRRVILYLN+CDCGRK+C+ENA
Sbjct: 840  MSNPAYKAVLDSSPSSNSSWELMKEILLCQVNFKNDLIDRRVILYLNDCDCGRKYCRENA 899

Query: 1397 ALIVKNHLKKVSLKDTAIEFLIEYRSQMM---HEEGNPGPVGHIHLNKTLLIQSNISMHD 1227
            A +VKN LKK SLKDTA+EF+IEY  Q       E   G VGHIHLNK LL   N+SM +
Sbjct: 900  AYLVKNQLKKASLKDTAVEFMIEYVKQHAVSGSSEPGTGLVGHIHLNKLLLQDLNVSMQE 959

Query: 1226 ILEKCQDAINIQQKKKKVANLFKNIDLXXXXXXXXXXXXXXKWTDVPCIQFCWREAKIDN 1047
            + +KC++ IN  +KKK V   FK I L              K +D+PC+ F W+  + DN
Sbjct: 960  VCQKCEETINSFRKKKNVGPFFKKIILSFRECCTFQHSCQSKGSDMPCLLFFWQGNRDDN 1019

Query: 1046 LEKASHLLDDTVCPVLFQTIIKGDPRVSTANIVWISPDRASWIRSPSKGPKGELALDIIL 867
            LE+  H+L   +CPVL QTIIKGD RV T NI+WISPD  +WIR+P K  KGELALDI+L
Sbjct: 1020 LEQILHILAHKICPVLLQTIIKGDSRVCTVNIIWISPDTTTWIRNPCKSRKGELALDIVL 1079

Query: 866  EKEAVKKSGDAWRVLMDCCLPIIHLVDTQRSIPYAIKQVDELLGISCAFEQAVQRLSTSV 687
            EK AVK+ GDAWR+++D CLP++HL+DT+RSIPYAIKQV ELLGISCAF+QAVQRLS SV
Sbjct: 1080 EKAAVKQRGDAWRIVLDACLPVLHLIDTRRSIPYAIKQVQELLGISCAFDQAVQRLSKSV 1139

Query: 686  TMVTKGVLKDHLLLLANSMTCSGTFIGFNTGGIKSLSRSLGVQVPFMNATLFTPRKCFER 507
            TMV KGVLK+HL+LLANSMTC+G  IGFN+GG K+LSR+L +QVPF  ATLFTPRKCFE+
Sbjct: 1140 TMVAKGVLKEHLILLANSMTCAGNLIGFNSGGYKALSRALNLQVPFTEATLFTPRKCFEK 1199

Query: 506  AAEKCHVDNLSSIVASCAWGKHVTVGTGSPFEILWNTGKAELRPNKEVDAYNFLHMVNSR 327
            A+EKCH D+LSSIVASC+WGKHVTVGTGS F++LW+T +     +  +D Y+FLH+V S 
Sbjct: 1200 ASEKCHTDSLSSIVASCSWGKHVTVGTGSRFDVLWDTKEIGPAQDGGIDIYSFLHLVRSG 1259

Query: 326  SKPEDMGTSCLGAEIDDLDQENDFMEFDLSPVRESGLEKLTFEDGVEF---------GLN 174
            S  ++  T+CLGAE++DL  E++ +E  +SP   S  EK  FED  EF         G  
Sbjct: 1260 SYGKEPDTACLGAEVEDLILEDENLELGMSPEHSSNFEKPVFEDSAEFQNTWENHVPGSG 1319

Query: 173  GD---DKDGFSKQDANEPDSWGK----KVNSEENDWMKIGEQSTYAEETQDNSAWG 27
            GD   +++  +     +P +W      KV  ++    +  ++S+ +    D   WG
Sbjct: 1320 GDWAVNQNKETTASTLKPSAWSSWGTDKVTMKDTFSTREPDESSRSAGWDDKGTWG 1375


>ref|XP_012068654.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Jatropha curcas]
          Length = 1980

 Score = 1683 bits (4359), Expect = 0.0
 Identities = 854/1387 (61%), Positives = 1054/1387 (75%), Gaps = 23/1387 (1%)
 Frame = -1

Query: 4094 KEMEDSSLPTTFEAKIKGIRFGLATRQEICKASVSDCPISHASQLSNPFLGLPLETGKCE 3915
            K ME++   T  + ++ GIRFGLAT +EI  ASVS C I+H+SQL+NP+LGLPLE GKC+
Sbjct: 7    KAMEENVQFTILDGEVVGIRFGLATPKEISTASVSGCSINHSSQLTNPYLGLPLEFGKCQ 66

Query: 3914 SCGTGEAGQCEGHFGYIELPTPIYHPDHVSEXXXXXXXXXXXXXXXXXXXXXXXXL--FE 3741
            SCGT EAG+CEGHFGYIELP PIYHP H+SE                            E
Sbjct: 67   SCGTSEAGKCEGHFGYIELPIPIYHPSHISELKRLLSLLCLKCLKLKTNKFQAKSNGVAE 126

Query: 3740 RVMSCHEEVSQISINEAKTTDGAYYLELKVPSRSRLEEGFWNFLEKYGFRYGNMYNSRPL 3561
            R+ SC EE SQIS+ E KTTDGA +L+LK+PSR RL +GFW+FL++YGF YG     R L
Sbjct: 127  RLFSCCEEASQISVKEIKTTDGALFLQLKLPSRMRLNDGFWSFLDRYGFHYGGDDTIRSL 186

Query: 3560 LPSEVMAILKKVPQETRKKLSAKGYFPQDGYIIQHLPVPPNCLSVPDVSDGISTMSTDYS 3381
            LP EVM +LK++PQ+TRKKL+ KGYFPQ+GYI+++LPVPPNCLSVPD+SDG+S MS+D S
Sbjct: 187  LPCEVMEMLKRIPQDTRKKLARKGYFPQEGYIMRYLPVPPNCLSVPDISDGVSIMSSDLS 246

Query: 3380 ITXXXXXXXXXXXXKNSRSGMPNFESHEIEANELQAAVAHYLQFRGTGKASRDVDTRFGV 3201
            I+            K+SRSG PNFESHE+EA +LQ+AV  YLQ RGT K SRDV++RFG+
Sbjct: 247  ISMLKKVLKQVEIIKSSRSGSPNFESHEVEAIDLQSAVDQYLQVRGTAKGSRDVESRFGI 306

Query: 3200 NKEINASSTKAWLEKMKTLFIRKGSGFSSRSVITGDPFKGVSEIGLPFEIAQKITFEERV 3021
            +KE N SSTKAWLEKM+TLFIRKGSGFSSRSVITGD +K V+EIG+PFEIAQ+ITFEERV
Sbjct: 307  HKESNDSSTKAWLEKMRTLFIRKGSGFSSRSVITGDAYKRVNEIGIPFEIAQRITFEERV 366

Query: 3020 NQHNMEFLQKLVDDKLCLTYRDGQSTYSLREGSKGHTFLRHGQVVHRRIMDGDIVFINRP 2841
            + HN+++LQ+LVD+KLC+TYRDG STYSLR+GSKGHTFLR GQVVHRRIMDGD VFINRP
Sbjct: 367  SVHNVKYLQELVDNKLCMTYRDGSSTYSLRDGSKGHTFLRPGQVVHRRIMDGDTVFINRP 426

Query: 2840 PTTHKHSLQALSVYIHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLEAKAEVVELFSV 2661
            PTTHKHSLQALSVY+HDDHTVKINPLICGPLSADFDGDC+HLFYPQSL AKAEV+ELFSV
Sbjct: 427  PTTHKHSLQALSVYVHDDHTVKINPLICGPLSADFDGDCVHLFYPQSLAAKAEVLELFSV 486

Query: 2660 EKQLLSSHTGNFNLQLATDSLLSLKILFRKYFLSRAAAQQLAMFVPNMLSRPSVIK-SNS 2484
            EKQLLSSH+GN NLQL TDSLLSLK +F+ YFL RAAAQQLAMFV   L +P++ K   S
Sbjct: 487  EKQLLSSHSGNLNLQLTTDSLLSLKSMFKAYFLDRAAAQQLAMFVSFSLPQPTLWKVPYS 546

Query: 2483 GPLWTASQILQMSLPPSFDCSGERHTISNSEVLSLDFNRDVMASIVNDIVTSLFFLKGPK 2304
             P+WT  QILQ +LP  FDC+GER+ IS  +++ +DF+RDV+ S++N+IV S+FF KGP 
Sbjct: 547  DPIWTVLQILQTALPSQFDCTGERYFISKGDIIKIDFSRDVVQSVINEIVISIFFEKGPD 606

Query: 2303 EVLRFFNSIQSLLMESLYSEGFSVSLRDFFLPRDVLESIQENIQKISPLLYHLRSSYSES 2124
             V +FFNS+Q LLME+L+SEGFSV L D ++ R V+ESI ++ + ISPLL  LRS+Y+E 
Sbjct: 607  AVFKFFNSLQPLLMENLFSEGFSVCLEDLYISRAVIESIHKDFKVISPLLSQLRSTYNEL 666

Query: 2123 IALQLDSYLRSVKIPVTNFILKSSRIGHLIDSKSESALSKVVQQIGFLGMQLSDRGKFYS 1944
            + LQL++++R VK+ V  FI++SS IG LID KS+SA++KVVQQIGFLG+Q+SDRGKFYS
Sbjct: 667  VELQLENHIRQVKLRVAEFIVRSSSIGDLIDYKSDSAMTKVVQQIGFLGLQISDRGKFYS 726

Query: 1943 AILVKDMSSMFQKRYPS-CDDYPAEEFGLVGRTLFRGLDPYQEMVHSISSREVIVRSTRG 1767
              LV+DM S F+++YPS   +YP+ ++GL+    F GLDPY+EMVHSIS+REVIVRS+RG
Sbjct: 727  KTLVEDMVSHFERKYPSEVVEYPSAQYGLIQSCFFHGLDPYEEMVHSISTREVIVRSSRG 786

Query: 1766 LTEPGTLFKNLMAILRDVVICYDGTVRNTCSNSIIQFEYGVNSA-NIASEFCAGDPVGVL 1590
            L+EPGTLFKNLMAILRDVVICYDGTVRN CSNSIIQFEYGV +     S F AG+PVGVL
Sbjct: 787  LSEPGTLFKNLMAILRDVVICYDGTVRNVCSNSIIQFEYGVKAGIKAQSLFPAGEPVGVL 846

Query: 1589 AATAMSNPAYKAVLDXXXXXXXSWEMMKEILLCGVNFKNDTSDRRVILYLNNCDCGRKHC 1410
            AATAMSNPAYKAVLD       SWE+MKEILLC VNFKND +DRR+ILYLN+C CGR +C
Sbjct: 847  AATAMSNPAYKAVLDSTPSSNSSWELMKEILLCRVNFKNDLTDRRIILYLNDCGCGRNYC 906

Query: 1409 QENAALIVKNHLKKVSLKDTAIEFLIEYRSQMMHEEGNPGPVGHIHLNKTLLIQSNISMH 1230
            QE AA  VKNHL+KV LKD A  F+IEY+ Q  H   + G  GHIHL+K  L    +SM 
Sbjct: 907  QEKAAYKVKNHLQKVILKDIANHFMIEYKRQ--HTIADVGLAGHIHLDKMKLENLKVSME 964

Query: 1229 DILEKCQDAINIQQKKKKVANLFKNIDLXXXXXXXXXXXXXXKWTDVPCIQFCWREAKID 1050
             I +KC + +N  +KKKK+A  FK I++              +W+  PC+ F W+++ I 
Sbjct: 965  VIHQKCTETVNFFRKKKKLALFFKRIEVSASQCCSFQESCADEWSGSPCLTFFWQDSDI- 1023

Query: 1049 NLEKASHLLDDTVCPVLFQTIIKGDPRVSTANIVWISPDRASWIRSPSKGPKGELALDII 870
             +E+ S+L  D +CPVL +T+IKGD R+S ANI WISPD  +WIR+PS+  KGELALD++
Sbjct: 1024 RIERISNLFADMICPVLLETVIKGDHRISNANITWISPDTTTWIRNPSRTQKGELALDVV 1083

Query: 869  LEKEAVKKSGDAWRVLMDCCLPIIHLVDTQRSIPYAIKQVDELLGISCAFEQAVQRLSTS 690
            +EK AVK+SGDAWR+++D CLP++HL+DT RSIPYAIKQ+ ELLG+SCAF+QAVQRLSTS
Sbjct: 1084 IEKSAVKQSGDAWRIVLDSCLPVLHLIDTTRSIPYAIKQIQELLGVSCAFDQAVQRLSTS 1143

Query: 689  VTMVTKGVLKDHLLLLANSMTCSGTFIGFNTGGIKSLSRSLGVQVPFMNATLFTPRKCFE 510
            VT+V KGVLK+HL+LLANSMTC+G  +GFN+GG KSLSRSL VQVPF +ATLFTPRKCFE
Sbjct: 1144 VTIVAKGVLKEHLILLANSMTCAGNLVGFNSGGYKSLSRSLDVQVPFTDATLFTPRKCFE 1203

Query: 509  RAAEKCHVDNLSSIVASCAWGKHVTVGTGSPFEILWNTGKAELRPNKEVDAYNFLHMVNS 330
            RAAEKCHVD LSSIVASC+WGK+V VGTGS F++LW+  +A L     +D Y FL+MV  
Sbjct: 1204 RAAEKCHVDTLSSIVASCSWGKNVAVGTGSRFDVLWDKKEACLDQEGSIDVYEFLNMVRC 1263

Query: 329  RSKPEDMGTSCLGAEIDDLDQENDFMEFDLSPVRESGLEKLTFEDGVEFGLNGD------ 168
             +  E+  T+CLGA++DDL  ++   +++LSP    G +K TFED  EF    D      
Sbjct: 1264 SANGEE-STACLGADVDDLMLDDGMDDWNLSPEHNFGSDKPTFEDRAEFQNCLDNQPADW 1322

Query: 167  DKDGFSKQDANEPDSWGKKVNSE---ENDWMKIGEQ--------STYAEETQDNS-AWGK 24
            +K  ++   ++   +WG   N E   EN W   G          ST A E  D S +W  
Sbjct: 1323 EKASYAVNGSSSGGNWGGDKNMETDKENSWSGWGRNAAETQNALSTKAHEESDKSNSW-- 1380

Query: 23   KVDSDGG 3
              D+ GG
Sbjct: 1381 --DTAGG 1385


>ref|XP_007218881.1| hypothetical protein PRUPE_ppa000088mg [Prunus persica]
            gi|462415343|gb|EMJ20080.1| hypothetical protein
            PRUPE_ppa000088mg [Prunus persica]
          Length = 1855

 Score = 1681 bits (4353), Expect = 0.0
 Identities = 849/1351 (62%), Positives = 1044/1351 (77%), Gaps = 17/1351 (1%)
 Frame = -1

Query: 4088 MEDSSLPTTFEAKIKGIRFGLATRQEICKASVSDCPISHASQLSNPFLGLPLETGKCESC 3909
            ME++S  T  E +I GI+FGLAT QEIC AS+S+C ISHASQLSNPFLGLPLE GKCESC
Sbjct: 1    MEEASSSTILEGEITGIKFGLATHQEICTASISNCAISHASQLSNPFLGLPLEFGKCESC 60

Query: 3908 GTGEAGQCEGHFGYIELPTPIYHPDHVSEXXXXXXXXXXXXXXXXXXXXXXXXL--FERV 3735
            GT EAG+CEGHFGYIELP PI+HP+HVSE                            ER+
Sbjct: 61   GTSEAGKCEGHFGYIELPIPIFHPNHVSELKRMLSLLCLKCLKMKKNKFPTKNAGLAERM 120

Query: 3734 MS-CHEEVSQISINEAKTTDGAYYLELKVPSRSRLEEGFWNFLEKYGFRYGNMYNSRPLL 3558
            +S C E+ SQ+SI E K TDG+  L+LK PS+SR   GFWNFLE+YGFRYG+ +  R LL
Sbjct: 121  LSSCCEDASQVSIGEIKPTDGSCSLQLKRPSKSRTPPGFWNFLERYGFRYGDGH-IRTLL 179

Query: 3557 PSEVMAILKKVPQETRKKLSAKGYFPQDGYIIQHLPVPPNCLSVPDVSDGISTMSTDYSI 3378
            P EVM +LK++PQETRKKL+AKGYFPQDGYI+  +PVPPNCLSVP++SDG+S MS D SI
Sbjct: 180  PCEVMEMLKRIPQETRKKLAAKGYFPQDGYILSQIPVPPNCLSVPEISDGVSVMSADPSI 239

Query: 3377 TXXXXXXXXXXXXKNSRSGMPNFESHEIEANELQAAVAHYLQFRGTGKASRDVDTRFGVN 3198
            +            ++SRSG+PNFES  +EANELQA +  YLQ RGTGK SRD+D RFGVN
Sbjct: 240  SMLKKVLKQVEIIRSSRSGIPNFESQIVEANELQAIIDQYLQVRGTGKPSRDIDARFGVN 299

Query: 3197 KEINASSTKAWLEKMKTLFIRKGSGFSSRSVITGDPFKGVSEIGLPFEIAQKITFEERVN 3018
            KE+NASSTKAWLEKM+TLFIRKGSGFSSRSVITGD F+ V+E+G+P+EIAQ+ITFEE+VN
Sbjct: 300  KELNASSTKAWLEKMRTLFIRKGSGFSSRSVITGDAFRRVNEVGIPYEIAQRITFEEKVN 359

Query: 3017 QHNMEFLQKLVDDKLCLTYRDGQSTYSLREGSKGHTFLRHGQVVHRRIMDGDIVFINRPP 2838
             HN+ +LQ+LVD KLCLTY+DG STYSLREGSKGHTFLR GQVVHRRIMDGD+VF+NRPP
Sbjct: 360  DHNIRYLQELVDSKLCLTYKDGSSTYSLREGSKGHTFLRPGQVVHRRIMDGDLVFVNRPP 419

Query: 2837 TTHKHSLQALSVYIHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLEAKAEVVELFSVE 2658
            TTHKHSLQAL VY+HDDH VKINPLICGPLSADFDGDCIHLFYPQSL AKAEV+ELFSVE
Sbjct: 420  TTHKHSLQALQVYVHDDHVVKINPLICGPLSADFDGDCIHLFYPQSLAAKAEVLELFSVE 479

Query: 2657 KQLLSSHTGNFNLQLATDSLLSLKILFRKYFLSRAAAQQLAMFVPNMLSRPSVIKSNSG- 2481
            KQLLSSH+G  NLQLA D+LLSLK++F+KYFL +AAAQQLAMF  + L RP+++K+NS  
Sbjct: 480  KQLLSSHSGKPNLQLAADALLSLKMMFKKYFLDKAAAQQLAMFASSSLPRPALLKANSAH 539

Query: 2480 PLWTASQILQMSLPPSFDCSGERHTISNSEVLSLDFNRDVMASIVNDIVTSLFFLKGPKE 2301
              WTA QILQ +LP  FDCSG+ + ++ SE+L++DF+   +A+++NDI TS+FF KG ++
Sbjct: 540  SYWTAFQILQTALPAHFDCSGDNYLVNKSEILNIDFSTSSVAAVMNDIATSVFFEKGGED 599

Query: 2300 VLRFFNSIQSLLMESLYSEGFSVSLRDFFLPRDVLESIQENIQKISPLLYHLRSSYSESI 2121
            VL+FF+S+Q LLME+L+SEGFSV L DF++ R  ++ IQ+NIQ  S LLYHLRS+Y+E +
Sbjct: 600  VLKFFDSLQPLLMENLFSEGFSVGLEDFYMSRTSIQDIQKNIQDSSDLLYHLRSTYNEFV 659

Query: 2120 ALQLDSYLRSVKIPVTNFILKSSRIGHLIDSKSESALSKVVQQIGFLGMQLSDRGKFYSA 1941
              QL + +RSVK+PV++FIL+SS +G LIDSKS+SA++K+VQQIGFLG+QLSD+G+FYS 
Sbjct: 660  EFQLQNRIRSVKVPVSHFILESSALGDLIDSKSDSAINKIVQQIGFLGLQLSDKGRFYSK 719

Query: 1940 ILVKDMSSMFQKRYPSCDDYPAEEFGLVGRTLFRGLDPYQEMVHSISSREVIVRSTRGLT 1761
             LV+D++S+   +YPS  DYP+ E+GLV    F GLDPY+ +VHSI++REVIVRS+RGL+
Sbjct: 720  TLVEDVASLCHSKYPSDIDYPSAEYGLVQSCFFHGLDPYEAIVHSIATREVIVRSSRGLS 779

Query: 1760 EPGTLFKNLMAILRDVVICYDGTVRNTCSNSIIQFEYGVNSANIASE-FCAGDPVGVLAA 1584
            EPGTLFKNLMAILRDVVICYDGTVRN CSNSIIQFEYGVN  +     F AG+PVGVLAA
Sbjct: 780  EPGTLFKNLMAILRDVVICYDGTVRNVCSNSIIQFEYGVNIGSRPQHLFPAGEPVGVLAA 839

Query: 1583 TAMSNPAYKAVLDXXXXXXXSWEMMKEILLCGVNFKNDTSDRRVILYLNNCDCGRKHCQE 1404
            TAMSNPAYKAVLD       SWE+MKEILLC VNFKN+  DRRVILYLNNC CGRK+C+E
Sbjct: 840  TAMSNPAYKAVLDSTPSSNSSWELMKEILLCKVNFKNELIDRRVILYLNNCGCGRKYCRE 899

Query: 1403 NAALIVKNHLKKVSLKDTAIEFLIEYRSQMM---HEEGNPGPVGHIHLNKTLLIQSNISM 1233
             AA +VKN LKKVSLKDTA+EF+IEY +Q+        + G VGHIHLN+ +L + NI +
Sbjct: 900  RAACLVKNQLKKVSLKDTAVEFMIEYNNQLSGLGSLINDAGLVGHIHLNEDMLRELNIGV 959

Query: 1232 HDILEKCQDAIN------IQQKKKKVANLFKNIDLXXXXXXXXXXXXXXKWTDVPCIQFC 1071
            HDIL+KCQ+ IN      + +KK  +   FKN  L              K +D PC+ F 
Sbjct: 960  HDILQKCQETINSFRRKKVGKKKFNIGYHFKNTVLFASEHCSFHHSCAEKRSDSPCLMFF 1019

Query: 1070 WREAKIDNLEKASHL--LDDTVCPVLFQTIIKGDPRVSTANIVWISPDRASWIRSPSKGP 897
             +    D+LE  + L    D +CPVL +TIIKGDPR+ +ANI+WI PD  +WIRSP+K  
Sbjct: 1020 LQAT--DDLETTTTLQYYADLICPVLLETIIKGDPRIGSANIIWIDPDTTTWIRSPNKSQ 1077

Query: 896  KGELALDIILEKEAVKKSGDAWRVLMDCCLPIIHLVDTQRSIPYAIKQVDELLGISCAFE 717
            KGE ALDI+LEK  +K+SGDAWR ++D CLP++HL+DT+RSIPYAIKQ+ ELLG+SCAF+
Sbjct: 1078 KGEWALDIVLEKSVIKQSGDAWRTVLDSCLPVLHLIDTRRSIPYAIKQIQELLGVSCAFD 1137

Query: 716  QAVQRLSTSVTMVTKGVLKDHLLLLANSMTCSGTFIGFNTGGIKSLSRSLGVQVPFMNAT 537
            QAVQRLST+VTMV KGVLK+HL+LLANSMTC+G F+GFN+ G K+LSR+L +QVPF  AT
Sbjct: 1138 QAVQRLSTAVTMVAKGVLKEHLILLANSMTCAGNFVGFNSSGYKALSRALNIQVPFTEAT 1197

Query: 536  LFTPRKCFERAAEKCHVDNLSSIVASCAWGKHVTVGTGSPFEILWNTGKAELRPNKEVDA 357
            LFTPRKCFERAAEKCH+D+L+SIVASC+WGKHV VGTG  F++LW+T + EL     +D 
Sbjct: 1198 LFTPRKCFERAAEKCHMDSLASIVASCSWGKHVAVGTGVRFDVLWDTREVELTQEGGLDV 1257

Query: 356  YNFLHMVNSRSKPEDMGTSCLGAEIDDLDQENDFMEFDLSPVRESGLEKLTFEDGVEFGL 177
            +NFLHMV S +  E+  T  LGAE+DDL   ++  +   SP   S  ++  FED VEF  
Sbjct: 1258 FNFLHMV-STANVEEATTGALGAEVDDLMLVDEMADSSFSPELNSSFDRPVFEDLVEF-- 1314

Query: 176  NGDDKDGFSKQDAN-EPDSWGKKVNSEENDW 87
              DDK G   + +N E DS     ++   DW
Sbjct: 1315 --DDKLGDLPEKSNWEKDSSFHTDSNGGKDW 1343


>ref|XP_006470866.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Citrus sinensis]
            gi|985437836|ref|XP_015383415.1| PREDICTED: DNA-directed
            RNA polymerase V subunit 1 [Citrus sinensis]
          Length = 1865

 Score = 1679 bits (4349), Expect = 0.0
 Identities = 859/1367 (62%), Positives = 1039/1367 (76%), Gaps = 9/1367 (0%)
 Frame = -1

Query: 4088 MEDSSLPTTFEAKIKGIRFGLATRQEICKASVSDCPISHASQLSNPFLGLPLETGKCESC 3909
            ME+++  T  E +I GIRFGLAT++EIC AS+SDC ISHASQL+NPFLGLPLE GKCESC
Sbjct: 1    MEENTSSTILEGQIVGIRFGLATQKEICTASISDCSISHASQLANPFLGLPLEFGKCESC 60

Query: 3908 GTGEAGQCEGHFGYIELPTPIYHPDHVSEXXXXXXXXXXXXXXXXXXXXXXXXL--FERV 3735
            GT E G+CEGHFGYIELP PIYHP H+SE                            +R+
Sbjct: 61   GTSEPGKCEGHFGYIELPIPIYHPSHISELKHMLSLLCLKCLKMKSTKFQIKNDGVAQRL 120

Query: 3734 MS-CHEEVSQISINEAKTTDGAYYLELKVPSRSRLEEGFWNFLEKYGFRYGNMYNSRPLL 3558
            +S C EE SQ+SI + KTTDGA+YLELK+PS+ RL  GFWNFLE+YGFRYG+   +R LL
Sbjct: 121  LSSCCEEASQVSIVDVKTTDGAFYLELKLPSKFRLCAGFWNFLERYGFRYGDSL-TRTLL 179

Query: 3557 PSEVMAILKKVPQETRKKLSAKGYFPQDGYIIQHLPVPPNCLSVPDVSDGISTMSTDYSI 3378
             SEV  +LK++P+ETRKKL+ KGYFPQDGYI+++LPVPPNCLSVPD+SDG+STMS+D SI
Sbjct: 180  ASEVKEMLKRIPEETRKKLAGKGYFPQDGYILEYLPVPPNCLSVPDISDGVSTMSSDLSI 239

Query: 3377 TXXXXXXXXXXXXKNSRSGMPNFESHEIEANELQAAVAHYLQFRGTGKASRDVDTRFGVN 3198
                         ++SRSG PNFES E+E+N+LQ AV  YL+ RGT K+SRDVD RFGV+
Sbjct: 240  AMLKKVLKQVEIIRSSRSGTPNFESQEVESNDLQLAVGQYLEVRGTAKSSRDVDARFGVS 299

Query: 3197 KEINASSTKAWLEKMKTLFIRKGSGFSSRSVITGDPFKGVSEIGLPFEIAQKITFEERVN 3018
            ++ N S+TKAWLEKM+TLFIRKGSGFSSRSVITGD +K V+EIG+PFEIAQ+ITFEERVN
Sbjct: 300  QDPN-STTKAWLEKMRTLFIRKGSGFSSRSVITGDAYKRVNEIGVPFEIAQRITFEERVN 358

Query: 3017 QHNMEFLQKLVDDKLCLTYRDGQSTYSLREGSKGHTFLRHGQVVHRRIMDGDIVFINRPP 2838
             HN+ +LQ+LVD+KLCLTY DG S+YSLREGSKGHTFLR GQVVHRRIMDGD VFINRPP
Sbjct: 359  VHNINYLQELVDNKLCLTYSDGSSSYSLREGSKGHTFLRPGQVVHRRIMDGDTVFINRPP 418

Query: 2837 TTHKHSLQALSVYIHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLEAKAEVVELFSVE 2658
            TTHKHSLQALSVY+HDDHTVKINPLICGPLSADFDGDCIHLFYPQSL AKAEV+ELFSVE
Sbjct: 419  TTHKHSLQALSVYVHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLAAKAEVLELFSVE 478

Query: 2657 KQLLSSHTGNFNLQLATDSLLSLKILFRKYFLSRAAAQQLAMFVPNMLSRPSVIKSNSGP 2478
            KQLLSSH GN NLQLATD+LLSLK++F+KYFL +A  QQLAMF  + L RP++ K+    
Sbjct: 479  KQLLSSHNGNLNLQLATDALLSLKVMFKKYFLDKAFTQQLAMFALSPLPRPALSKARCSA 538

Query: 2477 LWTASQILQMSLPPSFDCSGERHTISNSEVLSLDFNRDVMASIVNDIVTSLFFLKGPKEV 2298
             WTA QILQ  LPP FD  G+R+ I  SEVL  DF+RD + S++N+IVTS+FF KGP+EV
Sbjct: 539  RWTALQILQSVLPPGFDSCGDRYLIKKSEVLKGDFDRDTIPSVINEIVTSIFFEKGPEEV 598

Query: 2297 LRFFNSIQSLLMESLYSEGFSVSLRDFFLPRDVLESIQENIQKISPLLYHLRSSYSESIA 2118
            L FF+S+Q LLME+L+++GFSVSL DF L +  L +IQ+ IQ +  LLYH  S+ +E + 
Sbjct: 599  LEFFDSLQPLLMENLFADGFSVSLEDFSLSKAALWNIQKEIQALYSLLYHRMSTQNELVD 658

Query: 2117 LQLDSYLRSVKIPVTNFILKSSRIGHLIDSKSESALSKVVQQIGFLGMQLSDRGKFYSAI 1938
            LQ+++++R VK+ V  FILKSS +G+LIDSKS+SA+SKVVQQ GFLG+QLSDRGKFYS  
Sbjct: 659  LQIENHIRHVKMLVAKFILKSSTLGYLIDSKSDSAVSKVVQQAGFLGLQLSDRGKFYSKT 718

Query: 1937 LVKDMSSMFQKRYPSCDDYPAEEFGLVGRTLFRGLDPYQEMVHSISSREVIVRSTRGLTE 1758
            LV+D++S F++ YP   +YP  ++GL+    F GLDPY+EM HSIS+REVIVRS+RGL+E
Sbjct: 719  LVEDIASHFERIYPMDLNYPTAKYGLIKGCFFHGLDPYEEMTHSISTREVIVRSSRGLSE 778

Query: 1757 PGTLFKNLMAILRDVVICYDGTVRNTCSNSIIQFEYGVNSANIASEFCAGDPVGVLAATA 1578
            PGTLFKNLMA+LRDVVICYDGTVRN CSNSIIQF+Y VN+    S F AG+PVGVLAATA
Sbjct: 779  PGTLFKNLMAVLRDVVICYDGTVRNVCSNSIIQFDYAVNARKSHSLFPAGEPVGVLAATA 838

Query: 1577 MSNPAYKAVLDXXXXXXXSWEMMKEILLCGVNFKNDTSDRRVILYLNNCDCGRKHCQENA 1398
            MSNPAYKAVLD       SWE+MKEILLC V+F ND  DRRVILYLN+C CGRK+CQE A
Sbjct: 839  MSNPAYKAVLDSSPSSNNSWELMKEILLCRVSFNNDPIDRRVILYLNDCGCGRKYCQERA 898

Query: 1397 ALIVKNHLKKVSLKDTAIEFLIEYRSQMMHEEGNPGPVGHIHLNKTLLIQSNISMHDILE 1218
            A +VKN LK+VSLKD A+EFLIEY+   +  + + G VGHIHLNK LL    ISMHDIL 
Sbjct: 899  AYMVKNQLKRVSLKDAAVEFLIEYKKPEIISD-DEGLVGHIHLNKILLEDLRISMHDILP 957

Query: 1217 KCQDAINI---QQKKKKVANLFKNIDLXXXXXXXXXXXXXXKWTDVPCIQFCWREAKIDN 1047
            KCQ+ +     ++K KKV   FKN  L              K +++PC+ F  R A    
Sbjct: 958  KCQETLKSFCKKKKMKKVVQFFKNTSLSVSECCSFQQSCADKRSNMPCLMFVLRGASDSY 1017

Query: 1046 LEKASHLLDDTVCPVLFQTIIKGDPRVSTANIVWISPDRASWIRSPSKGPKGELALDIIL 867
            L+K S +L + + PVL +TIIKGDPR+ +ANI+WISPD  +WIR+PSK  KGELALD++L
Sbjct: 1018 LDKLSGVLANMIYPVLLETIIKGDPRIYSANIIWISPDTTAWIRNPSKNRKGELALDVVL 1077

Query: 866  EKEAVKKSGDAWRVLMDCCLPIIHLVDTQRSIPYAIKQVDELLGISCAFEQAVQRLSTSV 687
            EK  VK+SGDAWR ++D CLP+ HL+DT+RS+PYAIKQV ELLG+SCAFEQAVQRLS SV
Sbjct: 1078 EKSVVKQSGDAWRTVLDSCLPVFHLIDTRRSVPYAIKQVQELLGVSCAFEQAVQRLSASV 1137

Query: 686  TMVTKGVLKDHLLLLANSMTCSGTFIGFNTGGIKSLSRSLGVQVPFMNATLFTPRKCFER 507
            TMV KGVLK+HL+LLANSMTC+G  +GFN+GG K+LSRSL VQVPF  ATLFTPRKCFE+
Sbjct: 1138 TMVAKGVLKEHLILLANSMTCAGDLVGFNSGGYKALSRSLNVQVPFTEATLFTPRKCFEK 1197

Query: 506  AAEKCHVDNLSSIVASCAWGKHVTVGTGSPFEILWNTGKAELRPNKEVDAYNFLHMVNSR 327
            AAEKCH DNLSS+VA+C+WGKHV VGTGS F++LW T   E   +  VD Y+FLHMV S 
Sbjct: 1198 AAEKCHTDNLSSVVAACSWGKHVAVGTGSRFDLLWQTENEEFNQDDGVDVYDFLHMVRSS 1257

Query: 326  SKPEDMGTSCLGAEIDDLDQENDFMEFDLSPVRESGLEKLTFEDGVEFGLNGDDKDGFSK 147
            +  E+  T CLG E+D L+ E D   + LSP      +K  FED VE     D     +K
Sbjct: 1258 TGIEESDTGCLGEEVDGLEDEFD---WSLSPEHNLCSDKPVFEDLVE-----DQSWLENK 1309

Query: 146  QDANEPDSWGKKVNSEENDWMKIG---EQSTYAEETQDNSAWGKKVD 15
            Q+    DS      S E+ W K+G   E+ +    T+   AWGK  D
Sbjct: 1310 QENANWDSEADCRKSSEDKWEKLGTSLEKPSSGWRTE--GAWGKSSD 1354


>ref|XP_006420718.1| hypothetical protein CICLE_v10004129mg [Citrus clementina]
            gi|557522591|gb|ESR33958.1| hypothetical protein
            CICLE_v10004129mg [Citrus clementina]
          Length = 1867

 Score = 1679 bits (4349), Expect = 0.0
 Identities = 861/1368 (62%), Positives = 1044/1368 (76%), Gaps = 10/1368 (0%)
 Frame = -1

Query: 4088 MEDSSLPTTFEAKIKGIRFGLATRQEICKASVSDCPISHASQLSNPFLGLPLETGKCESC 3909
            ME+++  T  E +I GIRFGLAT++EIC AS+SDC ISHASQL+NPFLGLPLE GKCESC
Sbjct: 1    MEENTSSTILEGQIVGIRFGLATQKEICTASISDCSISHASQLANPFLGLPLEFGKCESC 60

Query: 3908 GTGEAGQCEGHFGYIELPTPIYHPDHVSEXXXXXXXXXXXXXXXXXXXXXXXXL--FERV 3735
            GT E G+CEGHFGYIELP PIYHP H+SE                            +R+
Sbjct: 61   GTSEPGKCEGHFGYIELPIPIYHPSHISELKRMLSLLCLKCLKMKSTKLQIKNDGVAQRL 120

Query: 3734 MS-CHEEVSQISINEAKTTDGAYYLELKVPSRSRLEEGFWNFLEKYGFRYGNMYNSRPLL 3558
            +S C EE SQ+SI + KTTDGA+YLELK+PS+ RL  GFWNFLE+YGFRYG+   +R LL
Sbjct: 121  LSSCCEEASQVSIVDVKTTDGAFYLELKLPSKFRLCAGFWNFLERYGFRYGDSL-TRTLL 179

Query: 3557 PSEVMAILKKVPQETRKKLSAKGYFPQDGYIIQHLPVPPNCLSVPDVSDGISTMSTDYSI 3378
             SEV  +LK++P+ETRKKL+ KGYFPQDGYI+++LPVPPNCLSVPD+SDG+STMS+D SI
Sbjct: 180  ASEVKEMLKRIPEETRKKLAGKGYFPQDGYILEYLPVPPNCLSVPDISDGVSTMSSDLSI 239

Query: 3377 TXXXXXXXXXXXXKNSRSGMPNFESHEIEANELQAAVAHYLQFRGTGKASRDVDTRFGVN 3198
                         ++SRSG PNFES E+E+N+LQ AV  YL+ RGT K+SRDVD RFGV+
Sbjct: 240  AMLKKVLKQVEIIRSSRSGTPNFESQEVESNDLQLAVGQYLEVRGTAKSSRDVDARFGVS 299

Query: 3197 KEINASSTKAWLEKMKTLFIRKGSGFSSRSVITGDPFKGVSEIGLPFEIAQKITFEERVN 3018
            ++ N S+TKAWLEKM+TLFIRKGSGFSSRSVITGD +K V+EIG+PFEIAQ+ITFEERVN
Sbjct: 300  QDPN-STTKAWLEKMRTLFIRKGSGFSSRSVITGDAYKRVNEIGVPFEIAQRITFEERVN 358

Query: 3017 QHNMEFLQKLVDDKLCLTYRDGQSTYSLREGSKGHTFLRHGQVVHRRIMDGDIVFINRPP 2838
             HN+ +LQ+LVD+KLCLTY DG S+YSLREGSKGHTFLR GQVVHRRIMDGD VFINRPP
Sbjct: 359  VHNINYLQELVDNKLCLTYSDGSSSYSLREGSKGHTFLRPGQVVHRRIMDGDTVFINRPP 418

Query: 2837 TTHKHSLQALSVYIHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLEAKAEVVELFSVE 2658
            TTHKHSLQALSVY+HDDHTVKINPLICGPLSADFDGDCIHLFYPQSL AKAEV+ELFSVE
Sbjct: 419  TTHKHSLQALSVYVHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLAAKAEVLELFSVE 478

Query: 2657 KQLLSSHTGNFNLQLATDSLLSLKILFRKYFLSRAAAQQLAMFVPNMLSRPSVIKSN-SG 2481
            KQLLSSH GN NLQLATD+LLSLK++F+KYFL +A AQQLAMF  + L RP++ K++ SG
Sbjct: 479  KQLLSSHNGNLNLQLATDALLSLKVMFKKYFLDKAFAQQLAMFALSPLPRPALSKAHCSG 538

Query: 2480 PLWTASQILQMSLPPSFDCSGERHTISNSEVLSLDFNRDVMASIVNDIVTSLFFLKGPKE 2301
            P WTA QILQ  LPP FD  G+R+ I  SEVL+ DF+RD + S++N+IVTS+FF KGP+E
Sbjct: 539  PRWTALQILQSVLPPGFDSCGDRYLIKKSEVLNGDFDRDTIPSVINEIVTSIFFEKGPEE 598

Query: 2300 VLRFFNSIQSLLMESLYSEGFSVSLRDFFLPRDVLESIQENIQKISPLLYHLRSSYSESI 2121
            VL FF+S+Q LLME+L+++GFSVSL DF L +  L +IQ+ IQ +  LLYH  S+ +E +
Sbjct: 599  VLEFFDSLQPLLMENLFADGFSVSLEDFSLSKAALWNIQKEIQALYSLLYHRMSTQNELV 658

Query: 2120 ALQLDSYLRSVKIPVTNFILKSSRIGHLIDSKSESALSKVVQQIGFLGMQLSDRGKFYSA 1941
             LQ+++++R VK+ V  FILKSS +G+LIDSKS+SA+SKVVQQ GFLG+QLSDRGKFYS 
Sbjct: 659  DLQIENHIRHVKMLVAKFILKSSTLGYLIDSKSDSAVSKVVQQAGFLGLQLSDRGKFYSK 718

Query: 1940 ILVKDMSSMFQKRYPSCDDYPAEEFGLVGRTLFRGLDPYQEMVHSISSREVIVRSTRGLT 1761
             LV+D++S F++ YP   +YP  ++GL+    F GLDPY+EM HSIS+REVIVRS+RGL+
Sbjct: 719  TLVEDIASHFERIYPMDLNYPTAKYGLIKGCFFHGLDPYEEMTHSISTREVIVRSSRGLS 778

Query: 1760 EPGTLFKNLMAILRDVVICYDGTVRNTCSNSIIQFEYGVNSANIASEFCAGDPVGVLAAT 1581
            EPGTLFKNLMA+LRDVVICYDGTVRN CSNSIIQF+Y VN+    S F AG+PVGVLAAT
Sbjct: 779  EPGTLFKNLMAVLRDVVICYDGTVRNVCSNSIIQFDYAVNARKSHSLFPAGEPVGVLAAT 838

Query: 1580 AMSNPAYKAVLDXXXXXXXSWEMMKEILLCGVNFKNDTSDRRVILYLNNCDCGRKHCQEN 1401
            AMSNPAYKAVLD       SWE+MKEILLC V+F ND  DRRVILYLN+C CGRK+CQE 
Sbjct: 839  AMSNPAYKAVLDSSPSSNNSWELMKEILLCRVSFNNDPIDRRVILYLNDCGCGRKYCQER 898

Query: 1400 AALIVKNHLKKVSLKDTAIEFLIEYRSQMMHEEGNPGPVGHIHLNKTLLIQSNISMHDIL 1221
            AA +VKN LK+VSLKD A+EFLIEY+   +  + + G VGHIHLNK LL    ISMHDIL
Sbjct: 899  AAYMVKNQLKRVSLKDAAVEFLIEYKKPEIISD-DEGLVGHIHLNKILLEDLRISMHDIL 957

Query: 1220 EKCQDAINI---QQKKKKVANLFKNIDLXXXXXXXXXXXXXXKWTDVPCIQFCWREAKID 1050
             KCQ+ +     ++K KKV   FKN  L              K +++PC+ F  R A   
Sbjct: 958  PKCQETLKSFCKKKKMKKVVQFFKNTSLSISECCSFQQSCADKRSNMPCLMFVLRGASDS 1017

Query: 1049 NLEKASHLLDDTVCPVLFQTIIKGDPRVSTANIVWISPDRASWIRSPSKGPKGELALDII 870
             L+K S +L + + PVL +TIIKGDPR+ +ANI+WISPD  +WIR+PSK  KGELALD++
Sbjct: 1018 YLDKLSGVLANMIYPVLLETIIKGDPRICSANIIWISPDTTAWIRNPSKNRKGELALDVV 1077

Query: 869  LEKEAVKKSGDAWRVLMDCCLPIIHLVDTQRSIPYAIKQVDELLGISCAFEQAVQRLSTS 690
            LEK  VK+SGDAWR ++D CLP+ HL+DT+RS+PYAIKQV ELLG+SCAFEQAVQRLS S
Sbjct: 1078 LEKSVVKQSGDAWRTVLDSCLPVFHLIDTRRSVPYAIKQVQELLGVSCAFEQAVQRLSAS 1137

Query: 689  VTMVTKGVLKDHLLLLANSMTCSGTFIGFNTGGIKSLSRSLGVQVPFMNATLFTPRKCFE 510
            VTMV KGVLK+HL+LLANSMTC+G  +GFN+GG K+LSRSL VQVPF  ATLF PRKCFE
Sbjct: 1138 VTMVAKGVLKEHLILLANSMTCAGDLVGFNSGGYKALSRSLNVQVPFTEATLFMPRKCFE 1197

Query: 509  RAAEKCHVDNLSSIVASCAWGKHVTVGTGSPFEILWNTGKAELRPNKEVDAYNFLHMVNS 330
            +AAEK H DNLSS+VA+C+WGKHV VGTGS F++LW T   E   +  VD Y+FLHMV S
Sbjct: 1198 KAAEKRHTDNLSSVVAACSWGKHVAVGTGSRFDLLWQTENEEFNQDDGVDVYDFLHMVRS 1257

Query: 329  RSKPEDMGTSCLGAEIDDLDQENDFMEFDLSPVRESGLEKLTFEDGVEFGLNGDDKDGFS 150
             +  E++ T CLG E+D L+ E D   + LSP      +K  FED VE     D     +
Sbjct: 1258 STGIEELDTGCLGEEVDGLEDEFD---WSLSPEHNLCSDKPIFEDLVE-----DQSWLEN 1309

Query: 149  KQDANEPDSWGKKVNSEENDWMKIG---EQSTYAEETQDNSAWGKKVD 15
            KQ+    DS      S E+ W K+G   E+ +    T+   AWGK  D
Sbjct: 1310 KQENENWDSEADCRKSSEDKWEKLGTSLEKPSSGWRTE--GAWGKSSD 1355


>ref|XP_008231662.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Prunus mume]
          Length = 1855

 Score = 1679 bits (4348), Expect = 0.0
 Identities = 847/1351 (62%), Positives = 1044/1351 (77%), Gaps = 17/1351 (1%)
 Frame = -1

Query: 4088 MEDSSLPTTFEAKIKGIRFGLATRQEICKASVSDCPISHASQLSNPFLGLPLETGKCESC 3909
            ME++S  T  E +I GI+FGLAT QEIC AS+S+C ISHASQLSNPFLGLPLE GKCESC
Sbjct: 1    MEEASSSTILEGEITGIKFGLATHQEICTASISNCAISHASQLSNPFLGLPLEFGKCESC 60

Query: 3908 GTGEAGQCEGHFGYIELPTPIYHPDHVSEXXXXXXXXXXXXXXXXXXXXXXXXL--FERV 3735
            GT EAG+CEGHFGYIELP PI+HP+HVSE                            ER+
Sbjct: 61   GTSEAGKCEGHFGYIELPIPIFHPNHVSELKRMLSLLCLKCLKMKKNKFPTKNAGLAERM 120

Query: 3734 MS-CHEEVSQISINEAKTTDGAYYLELKVPSRSRLEEGFWNFLEKYGFRYGNMYNSRPLL 3558
            +S C E+ SQ+SI E K TDG+  L+LK PS+SR   GFWNFLE+YGFRYG+ +  R LL
Sbjct: 121  LSSCCEDASQVSIGEIKPTDGSCSLQLKRPSKSRTPPGFWNFLERYGFRYGDGH-IRTLL 179

Query: 3557 PSEVMAILKKVPQETRKKLSAKGYFPQDGYIIQHLPVPPNCLSVPDVSDGISTMSTDYSI 3378
            P EVM +LK++PQETRKKL+AKGYFPQDGYI+  +PVPPNCLSVP++SDG+S MS D SI
Sbjct: 180  PCEVMEMLKRIPQETRKKLAAKGYFPQDGYILSQIPVPPNCLSVPEISDGVSVMSADPSI 239

Query: 3377 TXXXXXXXXXXXXKNSRSGMPNFESHEIEANELQAAVAHYLQFRGTGKASRDVDTRFGVN 3198
            +            ++SRSG+PNFES  +EANELQA +  YLQ RGTGK SRD+D RFGVN
Sbjct: 240  SMLKKVLKQVEIIRSSRSGIPNFESQIVEANELQAIIDQYLQVRGTGKPSRDIDARFGVN 299

Query: 3197 KEINASSTKAWLEKMKTLFIRKGSGFSSRSVITGDPFKGVSEIGLPFEIAQKITFEERVN 3018
            KE+NASSTKAWLEKM+TLFIRKGSGFSSRSVITGD F+ V+E+G+P+EIAQ+ITFEE+VN
Sbjct: 300  KELNASSTKAWLEKMRTLFIRKGSGFSSRSVITGDAFRRVNEVGIPYEIAQRITFEEKVN 359

Query: 3017 QHNMEFLQKLVDDKLCLTYRDGQSTYSLREGSKGHTFLRHGQVVHRRIMDGDIVFINRPP 2838
             HN+ +LQ+LVD KLCLTY+DG STYSLREGSKGHTFLR GQVVHRRIMDGD+VF+NRPP
Sbjct: 360  DHNIRYLQELVDSKLCLTYKDGSSTYSLREGSKGHTFLRPGQVVHRRIMDGDLVFVNRPP 419

Query: 2837 TTHKHSLQALSVYIHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLEAKAEVVELFSVE 2658
            TTHKHSLQAL VY+HDDH VKINPLICGPLSADFDGDCIHLFYPQSL AKAEV+ELFSVE
Sbjct: 420  TTHKHSLQALQVYVHDDHVVKINPLICGPLSADFDGDCIHLFYPQSLAAKAEVLELFSVE 479

Query: 2657 KQLLSSHTGNFNLQLATDSLLSLKILFRKYFLSRAAAQQLAMFVPNMLSRPSVIKSNSG- 2481
            KQLLSSH+G  NLQLATD+LLSLK++F+KYFL +AAAQQLAMF  + L RP+++K+NS  
Sbjct: 480  KQLLSSHSGKPNLQLATDALLSLKMMFKKYFLDKAAAQQLAMFASSSLPRPALLKANSAH 539

Query: 2480 PLWTASQILQMSLPPSFDCSGERHTISNSEVLSLDFNRDVMASIVNDIVTSLFFLKGPKE 2301
              WTA QILQ +LP  FDC+G+ + ++ SE+L++DF+   +A+++NDI TS+FF KG + 
Sbjct: 540  SYWTAFQILQTALPAHFDCNGDNYLVNKSEILNIDFSTSSVAAVMNDIATSVFFEKGGEA 599

Query: 2300 VLRFFNSIQSLLMESLYSEGFSVSLRDFFLPRDVLESIQENIQKISPLLYHLRSSYSESI 2121
            VL+FF+S+Q LLME+L+SEGFSV L DF + R  ++ IQ+NIQ  S LLYHLRS+Y+E +
Sbjct: 600  VLKFFDSLQPLLMENLFSEGFSVGLEDFSMSRASIQDIQKNIQDSSDLLYHLRSTYNEFV 659

Query: 2120 ALQLDSYLRSVKIPVTNFILKSSRIGHLIDSKSESALSKVVQQIGFLGMQLSDRGKFYSA 1941
              QL + +RSVK+PV++FIL+SS +G LIDSKS+SA++K+VQQIGFLG+QLSD+G+FYS 
Sbjct: 660  EFQLQNRIRSVKVPVSHFILESSALGDLIDSKSDSAINKIVQQIGFLGLQLSDKGRFYSK 719

Query: 1940 ILVKDMSSMFQKRYPSCDDYPAEEFGLVGRTLFRGLDPYQEMVHSISSREVIVRSTRGLT 1761
             LV+D++S+   +YPS  DYP+ E+GLV    F GLDPY+ +VHSI++REVIVRS+RGL+
Sbjct: 720  TLVEDVASLCHSKYPSDIDYPSAEYGLVQSCFFHGLDPYEAIVHSIATREVIVRSSRGLS 779

Query: 1760 EPGTLFKNLMAILRDVVICYDGTVRNTCSNSIIQFEYGVNSANIASE-FCAGDPVGVLAA 1584
            EPGTLFKNLMAILRDVVICYDGTVRN CSNSIIQFEYGVN+ +     F AG+PVGVLAA
Sbjct: 780  EPGTLFKNLMAILRDVVICYDGTVRNVCSNSIIQFEYGVNTGSRHQHLFPAGEPVGVLAA 839

Query: 1583 TAMSNPAYKAVLDXXXXXXXSWEMMKEILLCGVNFKNDTSDRRVILYLNNCDCGRKHCQE 1404
            TAMSNPAYKAVLD       SWE+MKEILLC VNFKN+  DRRVILYLNNC CGRK+C+E
Sbjct: 840  TAMSNPAYKAVLDSTPSSNSSWELMKEILLCKVNFKNELIDRRVILYLNNCGCGRKYCRE 899

Query: 1403 NAALIVKNHLKKVSLKDTAIEFLIEYRSQMM---HEEGNPGPVGHIHLNKTLLIQSNISM 1233
             AA +VKN LKKVSLKDTA+EF+IEY +Q+        + G VGHIHLN+ +L + N+ +
Sbjct: 900  RAACLVKNQLKKVSLKDTAVEFMIEYNNQLSGLGSLVNDAGLVGHIHLNEDMLRELNVGV 959

Query: 1232 HDILEKCQDAIN------IQQKKKKVANLFKNIDLXXXXXXXXXXXXXXKWTDVPCIQFC 1071
            HDIL+KCQ+ IN      + +KK  +   FKN  L              K +D PC+ F 
Sbjct: 960  HDILQKCQETINSFRRKKVGKKKFNIGYHFKNTVLFASEHCSFHHSSAEKRSDSPCLMFF 1019

Query: 1070 WREAKIDNLEKASHL--LDDTVCPVLFQTIIKGDPRVSTANIVWISPDRASWIRSPSKGP 897
             +    D+LE  + L    D +CPVL +TIIKGDPR+ +ANI+WI PD  +WIRSP+K  
Sbjct: 1020 LQAT--DDLETTTTLQYYADLICPVLLETIIKGDPRIGSANIIWIDPDTTTWIRSPNKSQ 1077

Query: 896  KGELALDIILEKEAVKKSGDAWRVLMDCCLPIIHLVDTQRSIPYAIKQVDELLGISCAFE 717
            KGE ALD++LEK  +K+SGDAWR ++D CLP++HL+DT+RSIPYAIKQ+ ELLG+SCAF+
Sbjct: 1078 KGEWALDVVLEKSVIKQSGDAWRTVLDSCLPVLHLIDTRRSIPYAIKQIQELLGVSCAFD 1137

Query: 716  QAVQRLSTSVTMVTKGVLKDHLLLLANSMTCSGTFIGFNTGGIKSLSRSLGVQVPFMNAT 537
            QAVQRLST+VTMV KGVLK+HL+LLANSMTC+G F+GFN+ G K+LSR+L +QVPF  AT
Sbjct: 1138 QAVQRLSTAVTMVAKGVLKEHLILLANSMTCAGNFVGFNSSGYKALSRALNIQVPFTEAT 1197

Query: 536  LFTPRKCFERAAEKCHVDNLSSIVASCAWGKHVTVGTGSPFEILWNTGKAELRPNKEVDA 357
            LFTPRKCFERAAEKCH+D+L+SIVASC+WGKHV VGTG+ F++LW+T + E      +D 
Sbjct: 1198 LFTPRKCFERAAEKCHMDSLASIVASCSWGKHVAVGTGARFDVLWDTREVEFTQEGGLDV 1257

Query: 356  YNFLHMVNSRSKPEDMGTSCLGAEIDDLDQENDFMEFDLSPVRESGLEKLTFEDGVEFGL 177
            +NFLHMV S +  E+  T  LGAE+DDL   ++  +   SP   S  ++  FED VEF  
Sbjct: 1258 FNFLHMV-STANVEEETTGALGAEVDDLMLVDEMADSSFSPELNSSFDRPVFEDLVEF-- 1314

Query: 176  NGDDKDGFSKQDAN-EPDSWGKKVNSEENDW 87
              DDK G   + +N E DS     +S   DW
Sbjct: 1315 --DDKLGDLPEKSNWEKDSSFHTDSSGGKDW 1343


>ref|XP_007011001.1| DNA-directed RNA polymerase E subunit 1, putative isoform 3
            [Theobroma cacao] gi|508727914|gb|EOY19811.1|
            DNA-directed RNA polymerase E subunit 1, putative isoform
            3 [Theobroma cacao]
          Length = 1675

 Score = 1678 bits (4345), Expect = 0.0
 Identities = 852/1378 (61%), Positives = 1039/1378 (75%), Gaps = 26/1378 (1%)
 Frame = -1

Query: 4088 MEDSSLPTTFEAKIKGIRFGLATRQEICKASVSDCPISHASQLSNPFLGLPLETGKCESC 3909
            ME++S  +T + +I GI F LAT +EI  AS+S  PI+H SQLSN +LGLPLE GKC +C
Sbjct: 1    MEENSSASTVDGEIVGIGFCLATPREIFTASISGFPINHVSQLSNSYLGLPLEFGKCNAC 60

Query: 3908 GTGEAGQCEGHFGYIELPTPIYHPDHVSEXXXXXXXXXXXXXXXXXXXXXXXXLF-ERVM 3732
            GT E G+CEGHFGYIELP PIYHP H+SE                           +R++
Sbjct: 61   GTSEPGKCEGHFGYIELPIPIYHPSHISELKRLLSLLCLKCLRMKNKFQIKSGSISDRLL 120

Query: 3731 -SCHEEVSQISINEAKTTDGAYYLELKVPSRSRLEEGFWNFLEKYGFRYGNMYNSRPLLP 3555
             SC E   Q+SI E KTTDGA  LELK PSR       W FLEKYGFRYG+ +N+R LLP
Sbjct: 121  ASCCENAPQVSIKEVKTTDGACSLELKQPSRQARTS--WEFLEKYGFRYGDHHNTRTLLP 178

Query: 3554 SEVMAILKKVPQETRKKLSAKGYFPQDGYIIQHLPVPPNCLSVPDVSDGISTMSTDYSIT 3375
             EVM ILK++P ETR+KLS KG+FPQ+GYI+++LPVPPNCLSVPD+SDG+S MS+D S  
Sbjct: 179  CEVMEILKRIPAETRRKLSGKGFFPQEGYILRYLPVPPNCLSVPDISDGVSIMSSDLSTA 238

Query: 3374 XXXXXXXXXXXXKNSRSGMPNFESHEIEANELQAAVAHYLQFRGTGKASRDVDTRFGVNK 3195
                        K+SRSG PNFESHE+EAN+LQ+AV  YLQ RGT KASR++D R+G++K
Sbjct: 239  MLKKVLKQVEIIKSSRSGTPNFESHEVEANDLQSAVEQYLQVRGTVKASRNIDARYGISK 298

Query: 3194 EINASSTKAWLEKMKTLFIRKGSGFSSRSVITGDPFKGVSEIGLPFEIAQKITFEERVNQ 3015
            + + SSTKAWLEKM+TLFIRKGSGFSSR VITGDP+K V+EIG+P EIAQ+ITFEERVN 
Sbjct: 299  DASDSSTKAWLEKMRTLFIRKGSGFSSRGVITGDPYKKVNEIGIPSEIAQRITFEERVNM 358

Query: 3014 HNMEFLQKLVDDKLCLTYRDGQSTYSLREGSKGHTFLRHGQVVHRRIMDGDIVFINRPPT 2835
            HNM +LQ LVD+KLCLTYRDG STYSLREGSKGHTFLR GQVVHRRIMDGDIVFINRPPT
Sbjct: 359  HNMRYLQNLVDNKLCLTYRDGSSTYSLREGSKGHTFLRPGQVVHRRIMDGDIVFINRPPT 418

Query: 2834 THKHSLQALSVYIHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLEAKAEVVELFSVEK 2655
            THKHSLQALSVY+HDDHTVKINPLICGPLSADFDGDCIHLFYPQSL AKAEV ELFSVEK
Sbjct: 419  THKHSLQALSVYVHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLAAKAEVFELFSVEK 478

Query: 2654 QLLSSHTGNFNLQLATDSLLSLKILFRKYFLSRAAAQQLAMFVPNMLSRPSVIKSNS-GP 2478
            QLLSSH GN NLQLATDSLLSL+++ +     +A AQQL+MF+ + L +P+ +K NS GP
Sbjct: 479  QLLSSHNGNLNLQLATDSLLSLRVMLKTLLFKKADAQQLSMFLSSALPQPAFLKGNSFGP 538

Query: 2477 LWTASQILQMSLPPSFDCSGERHTISNSEVLSLDFNRDVMASIVNDIVTSLFFLKGPKEV 2298
             WTA QILQ + P   DCSG+R+ IS S++L++DF+RD+M S++N++VTS+FF KGPKEV
Sbjct: 539  CWTALQILQTAFPACLDCSGDRYLISKSDILTVDFSRDLMQSVINEVVTSIFFEKGPKEV 598

Query: 2297 LRFFNSIQSLLMESLYSEGFSVSLRDFFLPRDVLESIQENIQKISPLLYHLRSSYSESIA 2118
            L FF+S+Q LLME++++EGFSVSL DF + R+V+++IQ++IQ ISPLLY LRS+Y+E + 
Sbjct: 599  LNFFDSLQPLLMENVFAEGFSVSLEDFSVSREVIQNIQKDIQDISPLLYQLRSTYNELVG 658

Query: 2117 LQLDSYLRSVKIPVTNFILKSSRIGHLIDSKSESALSKVVQQIGFLGMQLSDRGKFYSAI 1938
            LQ+++++R  K PV NFIL SS +G LIDSKS+S ++KVVQQIGFLG+QLS++GKFYS  
Sbjct: 659  LQMENHIRVAKAPVANFILNSSALGDLIDSKSDSTVNKVVQQIGFLGLQLSNKGKFYSKT 718

Query: 1937 LVKDMSSMFQKRYPSCD-DYPAEEFGLVGRTLFRGLDPYQEMVHSISSREVIVRSTRGLT 1761
            LV+D++  FQ  YPS   DYP+ EFGL+    F GLDPY+ MVHSIS+REVIVRS+RGL+
Sbjct: 719  LVEDVAYQFQSIYPSDGVDYPSAEFGLIKSCFFHGLDPYEGMVHSISTREVIVRSSRGLS 778

Query: 1760 EPGTLFKNLMAILRDVVICYDGTVRNTCSNSIIQFEYGVNSANIASEFCAGDPVGVLAAT 1581
            EPGTLFKNLMAILRDVVICYDGTVRN  SNSIIQF+YG+N A    +F AG+PVGVLAAT
Sbjct: 779  EPGTLFKNLMAILRDVVICYDGTVRNISSNSIIQFQYGLN-ARTKPQFPAGEPVGVLAAT 837

Query: 1580 AMSNPAYKAVLDXXXXXXXSWEMMKEILLCGVNFKNDTSDRRVILYLNNCDCGRKHCQEN 1401
            AMSNPAYKAVLD       SWE+MKEILLC V+ KND  DRRVILYL +CDCGRK+CQEN
Sbjct: 838  AMSNPAYKAVLDSTPSSNSSWELMKEILLCKVSLKNDLVDRRVILYLKDCDCGRKYCQEN 897

Query: 1400 AALIVKNHLKKVSLKDTAIEFLIEYRSQMMHEEGNPGPVGHIHLNKTLLIQSNISMHDIL 1221
            AA +VKNHL+KV LKDTA+E + EY+ Q    E   G VGHI LNK +L + NISM ++ 
Sbjct: 898  AAYLVKNHLRKVKLKDTAVELIFEYKQQQTVSESEAGLVGHILLNKAVLKELNISMQEVH 957

Query: 1220 EKCQDAINIQQKKKKVANLFKNIDLXXXXXXXXXXXXXXKWTDVPCIQFCWREAKIDNLE 1041
             KCQ+ I   +KKKK A+ FK  DL              KW D+ C+ F  R  K D+L+
Sbjct: 958  MKCQETIISFRKKKKTADTFKRTDLFFSECCSIQQSCGGKWLDMSCLMFFCRNTKDDHLD 1017

Query: 1040 KASHLLDDTVCPVLFQTIIKGDPRVSTANIVWISPDRASWIRSPSKGPKGELALDIILEK 861
                 L D + PVL +T+IKGDPR+ +ANI+W+SPD  +WIRSPSK  KGELALD++LEK
Sbjct: 1018 CTLQDLVDIIYPVLLETVIKGDPRICSANIIWVSPDTTTWIRSPSKTQKGELALDVVLEK 1077

Query: 860  EAVKKSGDAWRVLMDCCLPIIHLVDTQRSIPYAIKQVDELLGISCAFEQAVQRLSTSVTM 681
             AVK++GDAWR ++DCCLP+I+L+DTQRSIPYAIKQV ELLGISCAFEQAVQRLSTSV+M
Sbjct: 1078 SAVKQNGDAWRTVIDCCLPVINLIDTQRSIPYAIKQVQELLGISCAFEQAVQRLSTSVSM 1137

Query: 680  VTKGVLKDHLLLLANSMTCSGTFIGFNTGGIKSLSRSLGVQVPFMNATLFTPRKCFERAA 501
            V +GVLK+HL+LLANSMTC+G  IGFN+GG K+LSRSL +QVPF  ATLFTPRKCFERAA
Sbjct: 1138 VARGVLKEHLILLANSMTCAGNLIGFNSGGYKALSRSLNIQVPFSEATLFTPRKCFERAA 1197

Query: 500  EKCHVDNLSSIVASCAWGKHVTVGTGSPFEILWNTGKAELRPNKEVDAYNFLHMVNSRSK 321
            EKCHVD+LSSIVASC+WGKHV VGTGS F++LW+  +        +D YNFLHM++S S 
Sbjct: 1198 EKCHVDSLSSIVASCSWGKHVAVGTGSRFDVLWDRKEVGFDQKSGIDVYNFLHMLSSASG 1257

Query: 320  PEDMGTSCLGAEIDDLDQENDFMEFDLSPVRESGLEKLTFEDGVEFGLNGDDKDGFSKQD 141
            P    T+CLG E+DDL   ++  E+ LSP   +GL+K  FED  +F  + D +   S  +
Sbjct: 1258 PSST-TTCLGEEVDDLMDVDNMAEWSLSPEHSNGLDKPVFEDAADFENDLDFQPAESSWE 1316

Query: 140  A----------NEPDSWGKKV------------NSEENDWMKIGEQSTYAEETQDNSA 33
                       N   +W KK              ++++DW   G   T   +TQD +A
Sbjct: 1317 KGVSLDKVSSWNVSSAWNKKAEDGDKFAAALTSTTKQSDWCDWG---TSKSKTQDAAA 1371


>ref|XP_007010999.1| DNA-directed RNA polymerase E subunit 1, putative isoform 1
            [Theobroma cacao] gi|590569189|ref|XP_007011000.1|
            DNA-directed RNA polymerase E subunit 1, putative isoform
            1 [Theobroma cacao] gi|508727912|gb|EOY19809.1|
            DNA-directed RNA polymerase E subunit 1, putative isoform
            1 [Theobroma cacao] gi|508727913|gb|EOY19810.1|
            DNA-directed RNA polymerase E subunit 1, putative isoform
            1 [Theobroma cacao]
          Length = 1788

 Score = 1678 bits (4345), Expect = 0.0
 Identities = 852/1378 (61%), Positives = 1039/1378 (75%), Gaps = 26/1378 (1%)
 Frame = -1

Query: 4088 MEDSSLPTTFEAKIKGIRFGLATRQEICKASVSDCPISHASQLSNPFLGLPLETGKCESC 3909
            ME++S  +T + +I GI F LAT +EI  AS+S  PI+H SQLSN +LGLPLE GKC +C
Sbjct: 1    MEENSSASTVDGEIVGIGFCLATPREIFTASISGFPINHVSQLSNSYLGLPLEFGKCNAC 60

Query: 3908 GTGEAGQCEGHFGYIELPTPIYHPDHVSEXXXXXXXXXXXXXXXXXXXXXXXXLF-ERVM 3732
            GT E G+CEGHFGYIELP PIYHP H+SE                           +R++
Sbjct: 61   GTSEPGKCEGHFGYIELPIPIYHPSHISELKRLLSLLCLKCLRMKNKFQIKSGSISDRLL 120

Query: 3731 -SCHEEVSQISINEAKTTDGAYYLELKVPSRSRLEEGFWNFLEKYGFRYGNMYNSRPLLP 3555
             SC E   Q+SI E KTTDGA  LELK PSR       W FLEKYGFRYG+ +N+R LLP
Sbjct: 121  ASCCENAPQVSIKEVKTTDGACSLELKQPSRQARTS--WEFLEKYGFRYGDHHNTRTLLP 178

Query: 3554 SEVMAILKKVPQETRKKLSAKGYFPQDGYIIQHLPVPPNCLSVPDVSDGISTMSTDYSIT 3375
             EVM ILK++P ETR+KLS KG+FPQ+GYI+++LPVPPNCLSVPD+SDG+S MS+D S  
Sbjct: 179  CEVMEILKRIPAETRRKLSGKGFFPQEGYILRYLPVPPNCLSVPDISDGVSIMSSDLSTA 238

Query: 3374 XXXXXXXXXXXXKNSRSGMPNFESHEIEANELQAAVAHYLQFRGTGKASRDVDTRFGVNK 3195
                        K+SRSG PNFESHE+EAN+LQ+AV  YLQ RGT KASR++D R+G++K
Sbjct: 239  MLKKVLKQVEIIKSSRSGTPNFESHEVEANDLQSAVEQYLQVRGTVKASRNIDARYGISK 298

Query: 3194 EINASSTKAWLEKMKTLFIRKGSGFSSRSVITGDPFKGVSEIGLPFEIAQKITFEERVNQ 3015
            + + SSTKAWLEKM+TLFIRKGSGFSSR VITGDP+K V+EIG+P EIAQ+ITFEERVN 
Sbjct: 299  DASDSSTKAWLEKMRTLFIRKGSGFSSRGVITGDPYKKVNEIGIPSEIAQRITFEERVNM 358

Query: 3014 HNMEFLQKLVDDKLCLTYRDGQSTYSLREGSKGHTFLRHGQVVHRRIMDGDIVFINRPPT 2835
            HNM +LQ LVD+KLCLTYRDG STYSLREGSKGHTFLR GQVVHRRIMDGDIVFINRPPT
Sbjct: 359  HNMRYLQNLVDNKLCLTYRDGSSTYSLREGSKGHTFLRPGQVVHRRIMDGDIVFINRPPT 418

Query: 2834 THKHSLQALSVYIHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLEAKAEVVELFSVEK 2655
            THKHSLQALSVY+HDDHTVKINPLICGPLSADFDGDCIHLFYPQSL AKAEV ELFSVEK
Sbjct: 419  THKHSLQALSVYVHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLAAKAEVFELFSVEK 478

Query: 2654 QLLSSHTGNFNLQLATDSLLSLKILFRKYFLSRAAAQQLAMFVPNMLSRPSVIKSNS-GP 2478
            QLLSSH GN NLQLATDSLLSL+++ +     +A AQQL+MF+ + L +P+ +K NS GP
Sbjct: 479  QLLSSHNGNLNLQLATDSLLSLRVMLKTLLFKKADAQQLSMFLSSALPQPAFLKGNSFGP 538

Query: 2477 LWTASQILQMSLPPSFDCSGERHTISNSEVLSLDFNRDVMASIVNDIVTSLFFLKGPKEV 2298
             WTA QILQ + P   DCSG+R+ IS S++L++DF+RD+M S++N++VTS+FF KGPKEV
Sbjct: 539  CWTALQILQTAFPACLDCSGDRYLISKSDILTVDFSRDLMQSVINEVVTSIFFEKGPKEV 598

Query: 2297 LRFFNSIQSLLMESLYSEGFSVSLRDFFLPRDVLESIQENIQKISPLLYHLRSSYSESIA 2118
            L FF+S+Q LLME++++EGFSVSL DF + R+V+++IQ++IQ ISPLLY LRS+Y+E + 
Sbjct: 599  LNFFDSLQPLLMENVFAEGFSVSLEDFSVSREVIQNIQKDIQDISPLLYQLRSTYNELVG 658

Query: 2117 LQLDSYLRSVKIPVTNFILKSSRIGHLIDSKSESALSKVVQQIGFLGMQLSDRGKFYSAI 1938
            LQ+++++R  K PV NFIL SS +G LIDSKS+S ++KVVQQIGFLG+QLS++GKFYS  
Sbjct: 659  LQMENHIRVAKAPVANFILNSSALGDLIDSKSDSTVNKVVQQIGFLGLQLSNKGKFYSKT 718

Query: 1937 LVKDMSSMFQKRYPSCD-DYPAEEFGLVGRTLFRGLDPYQEMVHSISSREVIVRSTRGLT 1761
            LV+D++  FQ  YPS   DYP+ EFGL+    F GLDPY+ MVHSIS+REVIVRS+RGL+
Sbjct: 719  LVEDVAYQFQSIYPSDGVDYPSAEFGLIKSCFFHGLDPYEGMVHSISTREVIVRSSRGLS 778

Query: 1760 EPGTLFKNLMAILRDVVICYDGTVRNTCSNSIIQFEYGVNSANIASEFCAGDPVGVLAAT 1581
            EPGTLFKNLMAILRDVVICYDGTVRN  SNSIIQF+YG+N A    +F AG+PVGVLAAT
Sbjct: 779  EPGTLFKNLMAILRDVVICYDGTVRNISSNSIIQFQYGLN-ARTKPQFPAGEPVGVLAAT 837

Query: 1580 AMSNPAYKAVLDXXXXXXXSWEMMKEILLCGVNFKNDTSDRRVILYLNNCDCGRKHCQEN 1401
            AMSNPAYKAVLD       SWE+MKEILLC V+ KND  DRRVILYL +CDCGRK+CQEN
Sbjct: 838  AMSNPAYKAVLDSTPSSNSSWELMKEILLCKVSLKNDLVDRRVILYLKDCDCGRKYCQEN 897

Query: 1400 AALIVKNHLKKVSLKDTAIEFLIEYRSQMMHEEGNPGPVGHIHLNKTLLIQSNISMHDIL 1221
            AA +VKNHL+KV LKDTA+E + EY+ Q    E   G VGHI LNK +L + NISM ++ 
Sbjct: 898  AAYLVKNHLRKVKLKDTAVELIFEYKQQQTVSESEAGLVGHILLNKAVLKELNISMQEVH 957

Query: 1220 EKCQDAINIQQKKKKVANLFKNIDLXXXXXXXXXXXXXXKWTDVPCIQFCWREAKIDNLE 1041
             KCQ+ I   +KKKK A+ FK  DL              KW D+ C+ F  R  K D+L+
Sbjct: 958  MKCQETIISFRKKKKTADTFKRTDLFFSECCSIQQSCGGKWLDMSCLMFFCRNTKDDHLD 1017

Query: 1040 KASHLLDDTVCPVLFQTIIKGDPRVSTANIVWISPDRASWIRSPSKGPKGELALDIILEK 861
                 L D + PVL +T+IKGDPR+ +ANI+W+SPD  +WIRSPSK  KGELALD++LEK
Sbjct: 1018 CTLQDLVDIIYPVLLETVIKGDPRICSANIIWVSPDTTTWIRSPSKTQKGELALDVVLEK 1077

Query: 860  EAVKKSGDAWRVLMDCCLPIIHLVDTQRSIPYAIKQVDELLGISCAFEQAVQRLSTSVTM 681
             AVK++GDAWR ++DCCLP+I+L+DTQRSIPYAIKQV ELLGISCAFEQAVQRLSTSV+M
Sbjct: 1078 SAVKQNGDAWRTVIDCCLPVINLIDTQRSIPYAIKQVQELLGISCAFEQAVQRLSTSVSM 1137

Query: 680  VTKGVLKDHLLLLANSMTCSGTFIGFNTGGIKSLSRSLGVQVPFMNATLFTPRKCFERAA 501
            V +GVLK+HL+LLANSMTC+G  IGFN+GG K+LSRSL +QVPF  ATLFTPRKCFERAA
Sbjct: 1138 VARGVLKEHLILLANSMTCAGNLIGFNSGGYKALSRSLNIQVPFSEATLFTPRKCFERAA 1197

Query: 500  EKCHVDNLSSIVASCAWGKHVTVGTGSPFEILWNTGKAELRPNKEVDAYNFLHMVNSRSK 321
            EKCHVD+LSSIVASC+WGKHV VGTGS F++LW+  +        +D YNFLHM++S S 
Sbjct: 1198 EKCHVDSLSSIVASCSWGKHVAVGTGSRFDVLWDRKEVGFDQKSGIDVYNFLHMLSSASG 1257

Query: 320  PEDMGTSCLGAEIDDLDQENDFMEFDLSPVRESGLEKLTFEDGVEFGLNGDDKDGFSKQD 141
            P    T+CLG E+DDL   ++  E+ LSP   +GL+K  FED  +F  + D +   S  +
Sbjct: 1258 PSST-TTCLGEEVDDLMDVDNMAEWSLSPEHSNGLDKPVFEDAADFENDLDFQPAESSWE 1316

Query: 140  A----------NEPDSWGKKV------------NSEENDWMKIGEQSTYAEETQDNSA 33
                       N   +W KK              ++++DW   G   T   +TQD +A
Sbjct: 1317 KGVSLDKVSSWNVSSAWNKKAEDGDKFAAALTSTTKQSDWCDWG---TSKSKTQDAAA 1371


>ref|XP_011655250.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Cucumis sativus]
            gi|778702723|ref|XP_011655251.1| PREDICTED: DNA-directed
            RNA polymerase V subunit 1 [Cucumis sativus]
            gi|700195913|gb|KGN51090.1| hypothetical protein
            Csa_5G435050 [Cucumis sativus]
          Length = 1963

 Score = 1666 bits (4314), Expect = 0.0
 Identities = 847/1380 (61%), Positives = 1050/1380 (76%), Gaps = 28/1380 (2%)
 Frame = -1

Query: 4085 EDSSLPTTFEAKIKGIRFGLATRQEICKASVSDCPISHASQLSNPFLGLPLETGKCESCG 3906
            E  S  +  +A+I GIRF LA  QEIC A++SDCPI+HASQLSNPFLGLP+E GKCESCG
Sbjct: 3    EAPSCSSILDAEIVGIRFSLANGQEICIAAISDCPITHASQLSNPFLGLPIEFGKCESCG 62

Query: 3905 TGEAGQCEGHFGYIELPTPIYHPDHVSEXXXXXXXXXXXXXXXXXXXXXXXXL--FERVM 3732
            T E G+CEGHFGYIELP PIYHP+H++E                        +   ER++
Sbjct: 63   TSEPGKCEGHFGYIELPIPIYHPNHITELKKMLSLLCLKCLKMKKTKFPSKNIGFAERLL 122

Query: 3731 S-CHEEVSQISINEAKTTDGAYYLELKVPSRSRLEEGFWNFLEKYGFRYGNMYNSRPLLP 3555
            S C E+ SQ++I EAK  DGA YL+LKVPSR+ L+E FW+FLE+YGFRYG+ + +R LLP
Sbjct: 123  SSCCEDASQVTIREAKKADGASYLQLKVPSRTSLQERFWDFLERYGFRYGDNF-TRTLLP 181

Query: 3554 SEVMAILKKVPQETRKKLSAKGYFPQDGYIIQHLPVPPNCLSVPDVSDGISTMSTDYSIT 3375
             EV  +LKK+P ETRKKL+ +GY+PQDGYI+Q+LPVPPNCLSVP++SDG++ MS+D +++
Sbjct: 182  CEVKEMLKKIPNETRKKLAGRGYYPQDGYILQYLPVPPNCLSVPEISDGVTVMSSDPAVS 241

Query: 3374 XXXXXXXXXXXXKNSRSGMPNFESHEIEANELQAAVAHYLQFRGTGKASRDVDTRFGVNK 3195
                        K SRSG PNFESHE+EAN+LQ AV  YLQ RGT KASR +D RFGVNK
Sbjct: 242  MLKKILKQVEIIKGSRSGAPNFESHEVEANDLQLAVDQYLQVRGTVKASRGIDARFGVNK 301

Query: 3194 EINASSTKAWLEKMKTLFIRKGSGFSSRSVITGDPFKGVSEIGLPFEIAQKITFEERVNQ 3015
            E+N  STKAWLEKM+TLFIRKGSGFSSRSVITGD +K V+EIG+PFE+AQ+ITFEERV+ 
Sbjct: 302  ELNDPSTKAWLEKMRTLFIRKGSGFSSRSVITGDAYKLVNEIGVPFEVAQRITFEERVSV 361

Query: 3014 HNMEFLQKLVDDKLCLTYRDGQSTYSLREGSKGHTFLRHGQVVHRRIMDGDIVFINRPPT 2835
            HN+ +LQ+LVD KLCLTYRDG S YSLREGS GHT+L+ GQ+VHRRIMDGDIVFINRPPT
Sbjct: 362  HNIRYLQELVDKKLCLTYRDGSSAYSLREGSMGHTYLKPGQIVHRRIMDGDIVFINRPPT 421

Query: 2834 THKHSLQALSVYIHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLEAKAEVVELFSVEK 2655
            THKHSLQAL VY+HDDH VKINPLICGPLSADFDGDCIHLFYPQS+ AKAEV+ LFSVEK
Sbjct: 422  THKHSLQALRVYLHDDHVVKINPLICGPLSADFDGDCIHLFYPQSIAAKAEVLGLFSVEK 481

Query: 2654 QLLSSHTGNFNLQLATDSLLSLKILFRKYFLSRAAAQQLAMFVPNMLSRPSVIKSNSGPL 2475
            QLLSSH+GN NLQLA DSLLSLK++FRKYFL +AAAQQLAMFV + L  P+++   SG L
Sbjct: 482  QLLSSHSGNLNLQLANDSLLSLKMMFRKYFLGKAAAQQLAMFVSSYLPPPALLGVRSGSL 541

Query: 2474 -WTASQILQMSLPPSFDCSGERHTISNSEVLSLDFNRDVMASIVNDIVTSLFFLKGPKEV 2298
             WTA QILQ  LP SFDC G+ + I NS  L  DF+RD M S++N+I+TS+FF KGP+EV
Sbjct: 542  HWTALQILQTVLPASFDCHGDSYLIKNSNFLKFDFDRDAMPSLINEILTSIFFQKGPEEV 601

Query: 2297 LRFFNSIQSLLMESLYSEGFSVSLRDFFLPRDVLESIQENIQKISPLLYHLRSSYSESIA 2118
            L+FF+S+Q LLME ++SEGFSV L D+ +P   L+++Q+NIQ +SPLLY LRS+++E + 
Sbjct: 602  LKFFDSLQPLLMEHIFSEGFSVGLDDYSMPMAFLQALQKNIQVLSPLLYQLRSTFNELVE 661

Query: 2117 LQLDSYLRSVKIPVTNFILKSSRIGHLIDSKSESALSKVVQQIGFLGMQLSDRGKFYSAI 1938
            LQL+++LRSVK+P TNFILK S +G L DSKSESA++KVVQQIGFLG+QLSD+G+FYS  
Sbjct: 662  LQLENHLRSVKVPFTNFILKLSSLGKLFDSKSESAINKVVQQIGFLGLQLSDKGRFYSKS 721

Query: 1937 LVKDMSSMFQKRYPSCD-DYPAEEFGLVGRTLFRGLDPYQEMVHSISSREVIVRSTRGLT 1761
            L++D++S+F  RY S   DYP+ EFGLV    F GLDPY+EMVHSIS+REV+VRS+RGLT
Sbjct: 722  LIEDVASLFHNRYSSDKIDYPSAEFGLVKGCFFHGLDPYEEMVHSISTREVMVRSSRGLT 781

Query: 1760 EPGTLFKNLMAILRDVVICYDGTVRNTCSNSIIQFEYGVNSANIA--SEFCAGDPVGVLA 1587
            EPGTLFKNLMAILRDVVICYDGTVRN CSNSIIQ EYG+ +  +   S F  G+PVGVLA
Sbjct: 782  EPGTLFKNLMAILRDVVICYDGTVRNVCSNSIIQLEYGMKAGMMQPYSLFPPGEPVGVLA 841

Query: 1586 ATAMSNPAYKAVLDXXXXXXXSWEMMKEILLCGVNFKNDTSDRRVILYLNNCDCGRKHCQ 1407
            ATAMS PAYKAVLD       SW+MMKEILLC V+FKN+  DRRVILYLNNC CGRK+C 
Sbjct: 842  ATAMSTPAYKAVLDSTPSSNSSWDMMKEILLCKVSFKNEPIDRRVILYLNNCACGRKYCN 901

Query: 1406 ENAALIVKNHLKKVSLKDTAIEFLIEYRSQMMHEEGNPGPVGHIHLNKTLLIQSNISMHD 1227
            ENAA +VK+HLKKV+LKD A++F+IEY  Q       PG VGH+HLN+ LL + NI M +
Sbjct: 902  ENAAYVVKSHLKKVTLKDAAMDFMIEYNRQPTPSGLGPGLVGHVHLNRMLLKELNIDMTE 961

Query: 1226 ILEKCQDAI-NIQQKKKKVANLFKNIDLXXXXXXXXXXXXXXKWTDVPCIQFCWREAKID 1050
            +L +CQ+ + + ++KKKK+A+  +                  +  D+PC+ F W + +  
Sbjct: 962  VLRRCQETMSSFKKKKKKIAHALR---FSISEHCAFHQWNGEESIDMPCLIF-WHQTRDV 1017

Query: 1049 NLEKASHLLDDTVCPVLFQTIIKGDPRVSTANIVWISPDRASWIRSPSKGPKGELALDII 870
            +LE+ +H+L D V P+L +TIIKGDPR+ +A+++WISPD  SW ++PS+   GELALD+ 
Sbjct: 1018 HLERTAHILADIVFPLLSETIIKGDPRIKSASVIWISPDSTSWQKNPSRWQDGELALDVC 1077

Query: 869  LEKEAVKKSGDAWRVLMDCCLPIIHLVDTQRSIPYAIKQVDELLGISCAFEQAVQRLSTS 690
            LEK AVK++GDAWR ++DCCLP++HL+DT+RS+PYAIKQV ELLGISCAF+Q +QRLS S
Sbjct: 1078 LEKSAVKQNGDAWRNVLDCCLPVLHLIDTRRSVPYAIKQVQELLGISCAFDQMIQRLSKS 1137

Query: 689  VTMVTKGVLKDHLLLLANSMTCSGTFIGFNTGGIKSLSRSLGVQVPFMNATLFTPRKCFE 510
            V+MV+KGVL DHL+LLANSMTC+G  IGFN+GG K+LSR+L +QVPF  ATLFTPRKCFE
Sbjct: 1138 VSMVSKGVLGDHLILLANSMTCTGNMIGFNSGGYKALSRALNIQVPFTEATLFTPRKCFE 1197

Query: 509  RAAEKCHVDNLSSIVASCAWGKHVTVGTGSPFEILWNTGKAELRPNKEVDAYNFLHMVNS 330
            +AAEKCH D+LSSIVASC+WGKHV VGTGS F+ILW+  +   + +  VD YNFLHMV S
Sbjct: 1198 KAAEKCHKDSLSSIVASCSWGKHVAVGTGSRFDILWDQKELGCKQDDVVDVYNFLHMVRS 1257

Query: 329  RSKPEDMGTSCLGAEIDDLDQENDFMEFDLSPVRESGLEKLTFEDGVEFGLNGDDKDGFS 150
              K E+  ++CLG EI+D+  E+++ E  LSP   S  EK  FED  EF    D+  G S
Sbjct: 1258 -GKSEEPTSACLGEEIEDIMVEDEYGELTLSPEPFSTSEKPVFEDSAEFEHCLDNYPGES 1316

Query: 149  KQDAN-------------EPDSWGKKVNSEE-NDWMKIGEQS------TYAEETQDNSAW 30
            K +               E +  GK  NS + NDW   G ++      T A+E   NSAW
Sbjct: 1317 KWEKAPSLGAVSTGGGQWESNENGKATNSSDGNDWSGWGRKAEPDVTVTNAQENTSNSAW 1376


>ref|XP_009361958.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Pyrus x
            bretschneideri] gi|694366759|ref|XP_009361959.1|
            PREDICTED: DNA-directed RNA polymerase V subunit 1 [Pyrus
            x bretschneideri]
          Length = 1960

 Score = 1663 bits (4307), Expect = 0.0
 Identities = 837/1369 (61%), Positives = 1045/1369 (76%), Gaps = 14/1369 (1%)
 Frame = -1

Query: 4088 MEDSSLPTTFEAKIKGIRFGLATRQEICKASVSDCPISHASQLSNPFLGLPLETGKCESC 3909
            ME++S     + +I GI+FGLAT QEIC AS+SDC ISHASQLSNPFLGLPLE GKCESC
Sbjct: 1    MEEASTSNILDGEIVGIKFGLATHQEICTASISDCSISHASQLSNPFLGLPLEFGKCESC 60

Query: 3908 GTGEAGQCEGHFGYIELPTPIYHPDHVSEXXXXXXXXXXXXXXXXXXXXXXXXL--FERV 3735
            GT E G+CEGHFGYIELP PI+HP+HVSE                            ER+
Sbjct: 61   GTSEPGKCEGHFGYIELPVPIFHPNHVSELKRMLSLLCLKCLKMKKNKFPTKNAGLAERM 120

Query: 3734 M-SCHEEVSQISINEAKTTDGAYYLELKVPSRSRLEEGFWNFLEKYGFRYGNMYNSRPLL 3558
            + SC E+ +Q+SI E K TD +  L+LK PS+SR   GFWNFLE+YGFRYG+ +  R LL
Sbjct: 121  LASCCEDAAQVSIGETKPTDSSCSLQLKRPSKSRTPPGFWNFLERYGFRYGDDH-IRTLL 179

Query: 3557 PSEVMAILKKVPQETRKKLSAKGYFPQDGYIIQHLPVPPNCLSVPDVSDGISTMSTDYSI 3378
            P EV+ +LK++PQ+TRKKL++KGYFPQDGYI++H+PVPPNCLSVP++SDG+S MS D SI
Sbjct: 180  PCEVLEMLKRIPQDTRKKLASKGYFPQDGYILRHIPVPPNCLSVPEISDGVSVMSADPSI 239

Query: 3377 TXXXXXXXXXXXXKNSRSGMPNFESHEIEANELQAAVAHYLQFRGTGKASRDVDTRFGVN 3198
            +            ++SRSG+PNFES  +EANELQA V  YLQ RGTGKASRD+D R GVN
Sbjct: 240  SMLRKVLKQIEVIRSSRSGIPNFESQIVEANELQAIVDQYLQVRGTGKASRDIDARLGVN 299

Query: 3197 KEINASSTKAWLEKMKTLFIRKGSGFSSRSVITGDPFKGVSEIGLPFEIAQKITFEERVN 3018
            +E+NASSTKAWLEKM+TLFIRKGSGFSSRSVITGD +K V+E+G+P+EIAQ+ITFEE+VN
Sbjct: 300  RELNASSTKAWLEKMRTLFIRKGSGFSSRSVITGDAYKRVNEVGIPYEIAQRITFEEKVN 359

Query: 3017 QHNMEFLQKLVDDKLCLTYRDGQSTYSLREGSKGHTFLRHGQVVHRRIMDGDIVFINRPP 2838
             HN+ +LQ+LVD KLCLTYRDG STYSLREGSKGHTFLR GQVVHRRI+DGD+VF+NRPP
Sbjct: 360  DHNIRYLQQLVDKKLCLTYRDGSSTYSLREGSKGHTFLRPGQVVHRRILDGDLVFVNRPP 419

Query: 2837 TTHKHSLQALSVYIHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLEAKAEVVELFSVE 2658
            TTHKHSLQAL VY+HDDH VKINPLICGPLSADFDGDCIHLFYPQSL AKAEV+ELFSVE
Sbjct: 420  TTHKHSLQALQVYVHDDHVVKINPLICGPLSADFDGDCIHLFYPQSLAAKAEVLELFSVE 479

Query: 2657 KQLLSSHTGNFNLQLATDSLLSLKILFRKYFLSRAAAQQLAMFVPNMLSRPSVIKSNSG- 2481
            KQLLSSH+G  NLQ+ATDSLLSLK++F+ YFL ++AAQQLAMF  + L RP+++K+N+  
Sbjct: 480  KQLLSSHSGKPNLQMATDSLLSLKMMFKNYFLDKSAAQQLAMFASSSLPRPALLKANAAR 539

Query: 2480 PLWTASQILQMSLPPSFDCSGERHTISNSEVLSLDFNRDVMASIVNDIVTSLFFLKGPKE 2301
              WTA QILQ +LP  FD  GE++ ++ SE+L +DF+   +++++ND+ TS+FF KG ++
Sbjct: 540  SYWTALQILQTALPAHFDYCGEKYLVNKSEILKIDFSTSEVSAVMNDVATSVFFEKGGED 599

Query: 2300 VLRFFNSIQSLLMESLYSEGFSVSLRDFFLPRDVLESIQENIQKISPLLYHLRSSYSESI 2121
            VL+FF+S+Q LLME+++SEGFSV L DF++ +  ++ IQ+NIQ  S LLYHLRS+Y+E +
Sbjct: 600  VLKFFDSLQPLLMENIFSEGFSVGLEDFYMSKTSIQDIQKNIQDTSDLLYHLRSTYNEFV 659

Query: 2120 ALQLDSYLRSVKIPVTNFILKSSRIGHLIDSKSESALSKVVQQIGFLGMQLSDRGKFYSA 1941
              QL+S ++++K+PV+ FIL+SS  G LIDSKS+SA++KVVQQIGFLG+QLSD+G+FYS 
Sbjct: 660  EFQLESRIKNLKVPVSCFILESSAFGDLIDSKSDSAINKVVQQIGFLGLQLSDKGRFYSK 719

Query: 1940 ILVKDMSSMFQKRYPSCDDYPAEEFGLVGRTLFRGLDPYQEMVHSISSREVIVRSTRGLT 1761
             LV+D++S++  +Y    +YP+ E+GLV    F GLDPY+E+VHSI++REVIVRS+RGLT
Sbjct: 720  TLVEDVASLYHNKYSFNMEYPSAEYGLVQSCFFHGLDPYEEIVHSIATREVIVRSSRGLT 779

Query: 1760 EPGTLFKNLMAILRDVVICYDGTVRNTCSNSIIQFEYGVNSANIASE-FCAGDPVGVLAA 1584
            EPGTLFKNLMAILRDVVICYDGTVRN CSNS+IQFEYGVNS +     F AG+PVGVLAA
Sbjct: 780  EPGTLFKNLMAILRDVVICYDGTVRNVCSNSVIQFEYGVNSGSRPPNLFPAGEPVGVLAA 839

Query: 1583 TAMSNPAYKAVLDXXXXXXXSWEMMKEILLCGVNFKNDTSDRRVILYLNNCDCGRKHCQE 1404
            TAMSNPAYKAVLD       SWE+MKEILLC VNFKN+  DRRVILYL+NC CGR  C+E
Sbjct: 840  TAMSNPAYKAVLDSTPSSNSSWELMKEILLCKVNFKNELIDRRVILYLSNCGCGRTFCRE 899

Query: 1403 NAALIVKNHLKKVSLKDTAIEFLIEYRSQMM---HEEGNPGPVGHIHLNKTLLIQSNISM 1233
             AA +VKN LKKVSLKDTA+EF+IEY +Q+          G VGHIHLN+ LL + N+ +
Sbjct: 900  RAACLVKNQLKKVSLKDTAVEFMIEYSNQLSSLGSMVNEAGLVGHIHLNEELLRELNVGV 959

Query: 1232 HDILEKCQDAIN------IQQKKKKVANLFKNIDLXXXXXXXXXXXXXXKWTDVPCIQFC 1071
             +I +KCQ+ +N      + +KK  +  LFKN  L              K +D PC+ F 
Sbjct: 960  DEIQQKCQETVNSFRRKRVGKKKFNIGYLFKNTVLFASEHCSFHHSCADKRSDSPCLMFF 1019

Query: 1070 WREAKIDNLEKASHLLDDTVCPVLFQTIIKGDPRVSTANIVWISPDRASWIRSPSKGPKG 891
             +    + LE  S    D +CPVL +TIIKGDPR+S+ANI+WI PD  +WIRSP+K  KG
Sbjct: 1020 LQAT--EELETTSQYYADLICPVLLETIIKGDPRISSANIIWIDPDTTTWIRSPNKSQKG 1077

Query: 890  ELALDIILEKEAVKKSGDAWRVLMDCCLPIIHLVDTQRSIPYAIKQVDELLGISCAFEQA 711
            E ALD++LEK  VK+SGDAWR+++D CLP++HL+DT+RSIPYAIKQ+ ELLG+SCAF+QA
Sbjct: 1078 EWALDVVLEKSVVKQSGDAWRIVLDSCLPVLHLIDTRRSIPYAIKQIQELLGVSCAFDQA 1137

Query: 710  VQRLSTSVTMVTKGVLKDHLLLLANSMTCSGTFIGFNTGGIKSLSRSLGVQVPFMNATLF 531
            VQRL+T+VTMV KGVLK+HL+LLANSMTC+G F+GFN+ G K+LSR+L +QVPF  ATLF
Sbjct: 1138 VQRLATAVTMVAKGVLKEHLILLANSMTCAGNFVGFNSSGYKALSRALNIQVPFTEATLF 1197

Query: 530  TPRKCFERAAEKCHVDNLSSIVASCAWGKHVTVGTGSPFEILWNTGKAELRPNKEVDAYN 351
            TPRKCFERAAEKCH+D+LSSIVASC+WGKHV VGTGS F+ILW+T +  L     +D +N
Sbjct: 1198 TPRKCFERAAEKCHMDSLSSIVASCSWGKHVAVGTGSRFDILWDTREGGLNQEGGLDVFN 1257

Query: 350  FLHMVNSRSKPEDMGTSCLGAEIDDLDQENDFMEFDLSPVRESGLEKLTFEDGVEFGLNG 171
            FLHMV S +  E+  T  LGAE+DDL   ++  +  LSP  +SGL++  FED +EF    
Sbjct: 1258 FLHMV-STANGEEATTGALGAEVDDLMVVDELADSCLSPELDSGLDRPVFEDIIEFEDKS 1316

Query: 170  DDKDGFSKQDANEPDSWGKKVNSEENDWMKIGEQSTYAEETQDNSAWGK 24
            +   G S        SW       END    G  ST  + T   S+WGK
Sbjct: 1317 ETPPGKS--------SW-------ENDSSVWGTNSTREDAT---SSWGK 1347


>ref|XP_012449584.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 isoform X2
            [Gossypium raimondii]
          Length = 1921

 Score = 1660 bits (4298), Expect = 0.0
 Identities = 844/1369 (61%), Positives = 1042/1369 (76%), Gaps = 15/1369 (1%)
 Frame = -1

Query: 4088 MEDSSLPTTFEAKIKGIRFGLATRQEICKASVSDCPISHASQLSNPFLGLPLETGKCESC 3909
            ME++S     + +I GI+F LAT +EI  ASVS  PI+H SQLSN +LGLPLE GKC +C
Sbjct: 1    MEENSSSVILDGEIVGIKFCLATPKEILTASVSGFPINHVSQLSNSYLGLPLEFGKCSAC 60

Query: 3908 GTGEAGQCEGHFGYIELPTPIYHPDHVSEXXXXXXXXXXXXXXXXXXXXXXXXLF-ERVM 3732
            GT E GQCEGHFGYIELP PIYHP H+SE                           ER++
Sbjct: 61   GTSEPGQCEGHFGYIELPIPIYHPSHISELKRLLSLLCLKCLKLKNKFQMKSGSVAERLL 120

Query: 3731 S-CHEEVSQISINEAKTTDGAYYLELKVPSRSRLEEGFWNFLEKYGFRYGNMYNSRPLLP 3555
            S C E   Q+SI E KTTDGA YLELK PSR       WNFLE+YGFRYG+ +++R LLP
Sbjct: 121  SSCCENTPQVSIKEVKTTDGACYLELKQPSRQSKTN--WNFLERYGFRYGD-HHTRTLLP 177

Query: 3554 SEVMAILKKVPQETRKKLSAKGYFPQDGYIIQHLPVPPNCLSVPDVSDGISTMSTDYSIT 3375
             EV+ ILK++P +TR+KLS KG+FPQ+GYI+Q+LPVPPNCLSVPDVSDG+S MS+D S +
Sbjct: 178  CEVVEILKRIPSQTRRKLSGKGFFPQEGYILQYLPVPPNCLSVPDVSDGVSVMSSDLSTS 237

Query: 3374 XXXXXXXXXXXXKNSRSGMPNFESHEIEANELQAAVAHYLQFRGTGKASRDVDTRFGVNK 3195
                        K+SRSG PNFESHE+EAN+LQ+AV  YLQ RGT KASR +D R+GVNK
Sbjct: 238  MLRKVLKQVEIIKSSRSGTPNFESHEVEANDLQSAVEQYLQVRGTVKASRSIDARYGVNK 297

Query: 3194 EINASSTKAWLEKMKTLFIRKGSGFSSRSVITGDPFKGVSEIGLPFEIAQKITFEERVNQ 3015
            + + SSTKAWLEKM+TLFIRKGSGFSSRSVITGDP+K V+EIG+P EIAQ+ITFEERVN 
Sbjct: 298  DASDSSTKAWLEKMRTLFIRKGSGFSSRSVITGDPYKKVNEIGIPSEIAQRITFEERVNM 357

Query: 3014 HNMEFLQKLVDDKLCLTYRDGQSTYSLREGSKGHTFLRHGQVVHRRIMDGDIVFINRPPT 2835
            HNM +LQ LVD+KLCLTYRDG STYSLREGSKGHTFLR GQVVHRRIMDGDIVFINRPPT
Sbjct: 358  HNMRYLQNLVDNKLCLTYRDGGSTYSLREGSKGHTFLRPGQVVHRRIMDGDIVFINRPPT 417

Query: 2834 THKHSLQALSVYIHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLEAKAEVVELFSVEK 2655
            THKHSLQALSVY+HDDHTVKINPLICGPLSADFDGDCIHLFYPQSL AKAEV ELFSVEK
Sbjct: 418  THKHSLQALSVYVHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLSAKAEVYELFSVEK 477

Query: 2654 QLLSSHTGNFNLQLATDSLLSLKILFRKYFLSRAAAQQLAMFVPNMLSRPSVIKSNS-GP 2478
            QLLSSH+GN NLQLATDSLLSL+++ + +   +A AQQL+MF+ + L  P+ +K N   P
Sbjct: 478  QLLSSHSGNLNLQLATDSLLSLRVMLKTFLFKKADAQQLSMFLSSALPEPAFLKCNHVAP 537

Query: 2477 LWTASQILQMSLPPSFDCSGERHTISNSEVLSLDFNRDVMASIVNDIVTSLFFLKGPKEV 2298
             WTA QILQ + P   DCS +R+ I  S++L +DFN+D+M S++N++V S+F+ KGPKEV
Sbjct: 538  CWTAFQILQTAFPACLDCSSDRYLIGKSDILKVDFNKDLMQSVINEVVASIFYEKGPKEV 597

Query: 2297 LRFFNSIQSLLMESLYSEGFSVSLRDFFLPRDVLESIQENIQKISPLLYHLRSSYSESIA 2118
            L FF+S+Q LLME++++EGF+V L DF + R+V+E+IQ++IQ ISPLLY LRS+Y+E + 
Sbjct: 598  LNFFDSLQPLLMENIFAEGFTVCLEDFSVSREVIENIQKDIQVISPLLYQLRSTYNELVE 657

Query: 2117 LQLDSYLRSVKIPVTNFILKSSRIGHLIDSKSESALSKVVQQIGFLGMQLSDRGKFYSAI 1938
            LQ+++++R  K P+ +FILK+S +G+LIDS+S+SA++KVVQQIGFLGMQLSD+GKFYS  
Sbjct: 658  LQMENHIRVAKEPIADFILKTSSLGNLIDSRSDSAVNKVVQQIGFLGMQLSDKGKFYSKT 717

Query: 1937 LVKDMSSMFQKRYPS-CDDYPAEEFGLVGRTLFRGLDPYQEMVHSISSREVIVRSTRGLT 1761
            LV+D++  FQ  YPS   DYP+ EFGL+    FRGLDPY+ +VHSIS+REV+VRSTRGL+
Sbjct: 718  LVEDVAHQFQSIYPSDAIDYPSAEFGLIKSCFFRGLDPYEGIVHSISTREVMVRSTRGLS 777

Query: 1760 EPGTLFKNLMAILRDVVICYDGTVRNTCSNSIIQFEYGVNSANIASEFCAGDPVGVLAAT 1581
            EPGTLFKNLMAILRDVVICYDGTVRN  SNSIIQF+YG+ SA    +F AG+PVGVLAAT
Sbjct: 778  EPGTLFKNLMAILRDVVICYDGTVRNVSSNSIIQFQYGL-SARTRPQFPAGEPVGVLAAT 836

Query: 1580 AMSNPAYKAVLDXXXXXXXSWEMMKEILLCGVNFKNDTSDRRVILYLNNCDCGRKHCQEN 1401
            AMSNPAYKAVLD       SWE+MKEILLC V+FKND  DRRVILYL +CDCGRK+CQEN
Sbjct: 837  AMSNPAYKAVLDSSPSSNSSWELMKEILLCKVSFKNDPIDRRVILYLKDCDCGRKYCQEN 896

Query: 1400 AALIVKNHLKKVSLKDTAIEFLIEYRSQMMHEEGNPGPVGHIHLNKTLLIQSNISMHDIL 1221
            AA +VKNHL++V LKD A++F+IEY+ Q +  E   G VGHI LNK LL + ++S+ +I 
Sbjct: 897  AAYLVKNHLRRVKLKDIAVDFIIEYQQQQIVSEIEAGLVGHILLNKDLLKELSVSVQEIH 956

Query: 1220 EKCQDAINIQQKKKKVANLFKNIDLXXXXXXXXXXXXXXKWTDVPCIQFCWREAKIDNLE 1041
             KCQ+ IN  +KKKK A  FK  DL              KW D+PC+ F +R    DNL+
Sbjct: 957  MKCQETINSFRKKKKTAETFKRTDLFVSESCSIQQSCVDKWLDMPCLMFFFRNTNDDNLD 1016

Query: 1040 KASHLLDDTVCPVLFQTIIKGDPRVSTANIVWISPDRASWIRSPSKGPKGELALDIILEK 861
             A  +L D + PVL QT+IKGDPR+ +A I+W++PD  +WIR+PSK  KGELAL+++LEK
Sbjct: 1017 SAIQILADIIYPVLLQTVIKGDPRICSAKIIWVNPDATTWIRNPSKTQKGELALEVVLEK 1076

Query: 860  EAVKKSGDAWRVLMDCCLPIIHLVDTQRSIPYAIKQVDELLGISCAFEQAVQRLSTSVTM 681
             AVK++GDAWR ++DCCLP+++++DT RSIPYAIKQV++LLGISCAFEQAVQRLSTSV+M
Sbjct: 1077 SAVKQNGDAWRTVIDCCLPVLNIIDTHRSIPYAIKQVEQLLGISCAFEQAVQRLSTSVSM 1136

Query: 680  VTKGVLKDHLLLLANSMTCSGTFIGFNTGGIKSLSRSLGVQVPFMNATLFTPRKCFERAA 501
            VT+GVLK+HL+LLANSMTC G  IGFN+GG K+LSRSL +QVPF  ATLFTPRKCFERAA
Sbjct: 1137 VTRGVLKEHLMLLANSMTCCGNLIGFNSGGYKTLSRSLNIQVPFTEATLFTPRKCFERAA 1196

Query: 500  EKCHVDNLSSIVASCAWGKHVTVGTGSPFEILWN--TGKAELRPNKEVDAYNFLHMVNSR 327
            EKC+ D+LSSIVASC+WGK V VGTGS F++LWN  +G  ++     +D YNFLHMV S 
Sbjct: 1197 EKCYDDSLSSIVASCSWGKRVAVGTGSRFDLLWNQESGSDQM---SGMDVYNFLHMV-SG 1252

Query: 326  SKPEDMGTSCLGAEIDDLDQENDFMEFDLSPVRESGLEKLTFEDGVEFGLNGDDKDGFSK 147
            +   +  T+CLG E+DDL       E+ LSP   +GL+K  FED  EF  N D +   + 
Sbjct: 1253 AGGSNSNTACLGEEVDDL-----MDEWCLSPDHSTGLDKPVFEDAAEFENNLDGQSASAN 1307

Query: 146  QDANEP---------DSWGKKVNSEENDWMKIGEQSTYAEETQDNSAWG 27
             + +           D+ G   N+E+ D  K    +T +E+  + S WG
Sbjct: 1308 WEKDVSLDKVSDVGWDASGWNKNAEDVD--KFAAAATSSEKQNEWSGWG 1354