BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00009778
         (3238 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_012849958.1| PREDICTED: DNA gyrase subunit A, chloroplast...   974   0.0  
gb|EYU26907.1| hypothetical protein MIMGU_mgv1a000966mg [Erythra...   974   0.0  
ref|XP_011078973.1| PREDICTED: DNA gyrase subunit A, chloroplast...   939   0.0  
ref|XP_009788233.1| PREDICTED: DNA gyrase subunit A, chloroplast...   888   0.0  
ref|XP_009617006.1| PREDICTED: DNA gyrase subunit A, chloroplast...   887   0.0  
ref|XP_009617007.1| PREDICTED: DNA gyrase subunit A, chloroplast...   882   0.0  
ref|XP_009788234.1| PREDICTED: DNA gyrase subunit A, chloroplast...   882   0.0  
sp|Q5YLB5.1|GYRA_NICBE RecName: Full=DNA gyrase subunit A, chlor...   880   0.0  
ref|XP_015062059.1| PREDICTED: DNA gyrase subunit A, chloroplast...   879   0.0  
ref|XP_004230064.1| PREDICTED: DNA gyrase subunit A, chloroplast...   878   0.0  
ref|XP_006347708.1| PREDICTED: DNA gyrase subunit A, chloroplast...   878   0.0  
emb|CDP16534.1| unnamed protein product [Coffea canephora]            865   0.0  
ref|XP_015876288.1| PREDICTED: DNA gyrase subunit A, chloroplast...   857   0.0  
ref|XP_002271674.2| PREDICTED: DNA gyrase subunit A, chloroplast...   855   0.0  
ref|XP_008231902.1| PREDICTED: DNA gyrase subunit A, chloroplast...   853   0.0  
ref|XP_012458415.1| PREDICTED: DNA gyrase subunit A, chloroplast...   850   0.0  
gb|KJB75042.1| hypothetical protein B456_012G020500 [Gossypium r...   850   0.0  
ref|XP_008445382.1| PREDICTED: DNA gyrase subunit A, chloroplast...   850   0.0  
ref|XP_010658997.1| PREDICTED: DNA gyrase subunit A, chloroplast...   849   0.0  
ref|XP_007010651.1| DNA gyrase subunit A [Theobroma cacao] gi|50...   847   0.0  

>ref|XP_012849958.1| PREDICTED: DNA gyrase subunit A, chloroplastic/mitochondrial
            [Erythranthe guttata]
          Length = 953

 Score =  974 bits (2519), Expect = 0.0
 Identities = 501/561 (89%), Positives = 524/561 (93%)
 Frame = +3

Query: 1230 NKASLVEKIAELVENKILEGISDIRDESDRSGMRIVIEVKRGSDPSIVLNNLHHLTALQS 1409
            NKASLVEKIAELVENKILEGISDIRDESDRSGMRIVIE+KRGS+PSIVLNNL+ LTALQS
Sbjct: 372  NKASLVEKIAELVENKILEGISDIRDESDRSGMRIVIELKRGSEPSIVLNNLYRLTALQS 431

Query: 1410 TFSCNMVGILNGQPKQMGLKELLQAFLDFRCSVVERRAKFKLSQAQDRYHIVEGIIIGLD 1589
            TFSCNMVGILNGQPK MGLKELLQAFLDFRCSVVERRAK+KLSQAQDRYHIVEGII GL+
Sbjct: 432  TFSCNMVGILNGQPKLMGLKELLQAFLDFRCSVVERRAKYKLSQAQDRYHIVEGIITGLE 491

Query: 1590 NLDRVIDVIRKASSHVLAATNLREEFSLTDKQAEAILDISLRKLTSLEKNKFIDEGNSLS 1769
            NLDRVID+IRKASSHVLA T LR+EF L+DKQAEAILDISLRKLTSLEKNKF+DEG SLS
Sbjct: 492  NLDRVIDLIRKASSHVLATTELRKEFDLSDKQAEAILDISLRKLTSLEKNKFVDEGKSLS 551

Query: 1770 RXXXXXXXXXXXXXXXXXVIEAEANEIKNKFFTPRRSMLEDTDSGQLEDIDVIPNEEMLL 1949
                              +IE EANEIKNKFFTPRRSMLEDTDSGQLEDIDVIPNEE+LL
Sbjct: 552  LQISKLQELLSSRKQILEMIEDEANEIKNKFFTPRRSMLEDTDSGQLEDIDVIPNEEILL 611

Query: 1950 ALSEKGYLKRMRPDTFNLQNRGTIGKSVGKLRVNDTMSDFIVCRTHDHVLYFSDKGTVYS 2129
            ALSEKGYLKRMRPDTFNLQ RGTIGKSVGKLRVNDTMSDF+VCRTHD+VLYFSDKGTVYS
Sbjct: 612  ALSEKGYLKRMRPDTFNLQTRGTIGKSVGKLRVNDTMSDFLVCRTHDYVLYFSDKGTVYS 671

Query: 2130 ARAYKIPECSRAGAGTPLIQILSLSDGERVTSIIPVSEFEGDQYLMMLTMKGYIKKVSLN 2309
            ARAYKIPECSRA AGTPL+ ILSLS+GER+TSIIPVSEFEGDQYLMMLT+KGYIKKVSLN
Sbjct: 672  ARAYKIPECSRAAAGTPLVHILSLSEGERITSIIPVSEFEGDQYLMMLTVKGYIKKVSLN 731

Query: 2310 YFSSIRSTGIIAIQLVPGDELKWVRRCTNDDFVAMASQNGMVILSPCENIRALGRNTRGG 2489
            YFSSIR TGIIAIQLVPGDELKWVRRCTND+FVAMASQNGMVILSPCE +RALGRNTRGG
Sbjct: 732  YFSSIRCTGIIAIQLVPGDELKWVRRCTNDEFVAMASQNGMVILSPCEKVRALGRNTRGG 791

Query: 2490 VAMRLKQGDKMASMDIIPASFGQKLEKGSETQQTHGKGYTGPWLLFISESGFGKRVPLAS 2669
            VAMRLK  DKMA +DIIPASFG KLEKG ETQQTHGKG TGPWLLFISESGFGKRVPLAS
Sbjct: 792  VAMRLKPEDKMACIDIIPASFGTKLEKGIETQQTHGKGSTGPWLLFISESGFGKRVPLAS 851

Query: 2670 FRMSPLNRVGLKGYKFSLEDRLAAVFVVGFSVGEDGESDEQVVLVSQSGTVNRIKVRDIS 2849
            FRMSPLNRVGLKGYKFSLE+RLAAVFVVGFSVGEDGESDEQVVLVSQSGTVNRIKVRDIS
Sbjct: 852  FRMSPLNRVGLKGYKFSLENRLAAVFVVGFSVGEDGESDEQVVLVSQSGTVNRIKVRDIS 911

Query: 2850 IQSRFARGVILMRLEHAGKIQ 2912
            +QSR+ARGVILMRLEHAGKIQ
Sbjct: 912  VQSRYARGVILMRLEHAGKIQ 932



 Score =  568 bits (1464), Expect = 0.0
 Identities = 291/353 (82%), Positives = 305/353 (86%)
 Frame = +2

Query: 152  MNPCSIQPGAHFGPPNPIPEPAKPHMAFATGLRLLRSHPHTLSFSLTAPSRLLLARRVSE 331
            MNP +IQPG HF PPN  P PA PHMAFATGLRLLRSHPHTLSFS+  PSRLLLARRV+E
Sbjct: 1    MNPYTIQPGTHFTPPNTRPGPATPHMAFATGLRLLRSHPHTLSFSVAGPSRLLLARRVTE 60

Query: 332  LRFLSAVGPHQRRRLFXXXXXXXXXXXXXXXXXXXXXXRDVXXXXXXXXXXRIVVTELHK 511
            LRFLS+VGP  +RRLF                      +D           R+VV ELHK
Sbjct: 61   LRFLSSVGP--QRRLFAVKASSRKREDEVEENGSVATVKD--GGGGEGGEGRVVVYELHK 116

Query: 512  EATEAYMSYAMSVLLGRALPDVRDGLKPVHRRILYAMHELGLSSKKPYKKCARVVGEVLG 691
            EATEAYMSYAMSVLLGRALPDVRDGLKPVHRRILYAMHELGLSS+KP+KKCARVVGEVLG
Sbjct: 117  EATEAYMSYAMSVLLGRALPDVRDGLKPVHRRILYAMHELGLSSRKPHKKCARVVGEVLG 176

Query: 692  KFHPHGDSAVYDSLVRMAQDFSLRSPLIRGHGNFGSIDADPAAAMRYTECRLEALTEAML 871
            KFHPHGD+AVYDSLVRMAQDFSLRSPLIRGHGNFGS+DADP AAMRYTECRLEAL EAML
Sbjct: 177  KFHPHGDTAVYDSLVRMAQDFSLRSPLIRGHGNFGSMDADPPAAMRYTECRLEALAEAML 236

Query: 872  LADLEQDTVDYVPNFDNSQKEPSLLPARIPNLLLNGASGIAVGMATNIPPHNLGELVDAL 1051
            L+DLEQDTVD+VPNFDNSQKEPSLLPARIPNLLLNGASGIAVGMATNIPPHNLGELVDAL
Sbjct: 237  LSDLEQDTVDFVPNFDNSQKEPSLLPARIPNLLLNGASGIAVGMATNIPPHNLGELVDAL 296

Query: 1052 SVLIHNPEATLQELLEYMPGPDFPTGGIIMGNLGILEAYRTGRGRVVIRGKTD 1210
            SVLIHNPEATLQELLEYMPGPDFPTGGIIMGN GIL+AYRTGRGRVVIRGKTD
Sbjct: 297  SVLIHNPEATLQELLEYMPGPDFPTGGIIMGNTGILDAYRTGRGRVVIRGKTD 349


>gb|EYU26907.1| hypothetical protein MIMGU_mgv1a000966mg [Erythranthe guttata]
          Length = 928

 Score =  974 bits (2519), Expect = 0.0
 Identities = 501/561 (89%), Positives = 524/561 (93%)
 Frame = +3

Query: 1230 NKASLVEKIAELVENKILEGISDIRDESDRSGMRIVIEVKRGSDPSIVLNNLHHLTALQS 1409
            NKASLVEKIAELVENKILEGISDIRDESDRSGMRIVIE+KRGS+PSIVLNNL+ LTALQS
Sbjct: 347  NKASLVEKIAELVENKILEGISDIRDESDRSGMRIVIELKRGSEPSIVLNNLYRLTALQS 406

Query: 1410 TFSCNMVGILNGQPKQMGLKELLQAFLDFRCSVVERRAKFKLSQAQDRYHIVEGIIIGLD 1589
            TFSCNMVGILNGQPK MGLKELLQAFLDFRCSVVERRAK+KLSQAQDRYHIVEGII GL+
Sbjct: 407  TFSCNMVGILNGQPKLMGLKELLQAFLDFRCSVVERRAKYKLSQAQDRYHIVEGIITGLE 466

Query: 1590 NLDRVIDVIRKASSHVLAATNLREEFSLTDKQAEAILDISLRKLTSLEKNKFIDEGNSLS 1769
            NLDRVID+IRKASSHVLA T LR+EF L+DKQAEAILDISLRKLTSLEKNKF+DEG SLS
Sbjct: 467  NLDRVIDLIRKASSHVLATTELRKEFDLSDKQAEAILDISLRKLTSLEKNKFVDEGKSLS 526

Query: 1770 RXXXXXXXXXXXXXXXXXVIEAEANEIKNKFFTPRRSMLEDTDSGQLEDIDVIPNEEMLL 1949
                              +IE EANEIKNKFFTPRRSMLEDTDSGQLEDIDVIPNEE+LL
Sbjct: 527  LQISKLQELLSSRKQILEMIEDEANEIKNKFFTPRRSMLEDTDSGQLEDIDVIPNEEILL 586

Query: 1950 ALSEKGYLKRMRPDTFNLQNRGTIGKSVGKLRVNDTMSDFIVCRTHDHVLYFSDKGTVYS 2129
            ALSEKGYLKRMRPDTFNLQ RGTIGKSVGKLRVNDTMSDF+VCRTHD+VLYFSDKGTVYS
Sbjct: 587  ALSEKGYLKRMRPDTFNLQTRGTIGKSVGKLRVNDTMSDFLVCRTHDYVLYFSDKGTVYS 646

Query: 2130 ARAYKIPECSRAGAGTPLIQILSLSDGERVTSIIPVSEFEGDQYLMMLTMKGYIKKVSLN 2309
            ARAYKIPECSRA AGTPL+ ILSLS+GER+TSIIPVSEFEGDQYLMMLT+KGYIKKVSLN
Sbjct: 647  ARAYKIPECSRAAAGTPLVHILSLSEGERITSIIPVSEFEGDQYLMMLTVKGYIKKVSLN 706

Query: 2310 YFSSIRSTGIIAIQLVPGDELKWVRRCTNDDFVAMASQNGMVILSPCENIRALGRNTRGG 2489
            YFSSIR TGIIAIQLVPGDELKWVRRCTND+FVAMASQNGMVILSPCE +RALGRNTRGG
Sbjct: 707  YFSSIRCTGIIAIQLVPGDELKWVRRCTNDEFVAMASQNGMVILSPCEKVRALGRNTRGG 766

Query: 2490 VAMRLKQGDKMASMDIIPASFGQKLEKGSETQQTHGKGYTGPWLLFISESGFGKRVPLAS 2669
            VAMRLK  DKMA +DIIPASFG KLEKG ETQQTHGKG TGPWLLFISESGFGKRVPLAS
Sbjct: 767  VAMRLKPEDKMACIDIIPASFGTKLEKGIETQQTHGKGSTGPWLLFISESGFGKRVPLAS 826

Query: 2670 FRMSPLNRVGLKGYKFSLEDRLAAVFVVGFSVGEDGESDEQVVLVSQSGTVNRIKVRDIS 2849
            FRMSPLNRVGLKGYKFSLE+RLAAVFVVGFSVGEDGESDEQVVLVSQSGTVNRIKVRDIS
Sbjct: 827  FRMSPLNRVGLKGYKFSLENRLAAVFVVGFSVGEDGESDEQVVLVSQSGTVNRIKVRDIS 886

Query: 2850 IQSRFARGVILMRLEHAGKIQ 2912
            +QSR+ARGVILMRLEHAGKIQ
Sbjct: 887  VQSRYARGVILMRLEHAGKIQ 907



 Score =  531 bits (1367), Expect = e-169
 Identities = 274/328 (83%), Positives = 287/328 (87%)
 Frame = +2

Query: 227  MAFATGLRLLRSHPHTLSFSLTAPSRLLLARRVSELRFLSAVGPHQRRRLFXXXXXXXXX 406
            MAFATGLRLLRSHPHTLSFS+  PSRLLLARRV+ELRFLS+VGP  +RRLF         
Sbjct: 1    MAFATGLRLLRSHPHTLSFSVAGPSRLLLARRVTELRFLSSVGP--QRRLFAVKASSRKR 58

Query: 407  XXXXXXXXXXXXXRDVXXXXXXXXXXRIVVTELHKEATEAYMSYAMSVLLGRALPDVRDG 586
                         +D           R+VV ELHKEATEAYMSYAMSVLLGRALPDVRDG
Sbjct: 59   EDEVEENGSVATVKD--GGGGEGGEGRVVVYELHKEATEAYMSYAMSVLLGRALPDVRDG 116

Query: 587  LKPVHRRILYAMHELGLSSKKPYKKCARVVGEVLGKFHPHGDSAVYDSLVRMAQDFSLRS 766
            LKPVHRRILYAMHELGLSS+KP+KKCARVVGEVLGKFHPHGD+AVYDSLVRMAQDFSLRS
Sbjct: 117  LKPVHRRILYAMHELGLSSRKPHKKCARVVGEVLGKFHPHGDTAVYDSLVRMAQDFSLRS 176

Query: 767  PLIRGHGNFGSIDADPAAAMRYTECRLEALTEAMLLADLEQDTVDYVPNFDNSQKEPSLL 946
            PLIRGHGNFGS+DADP AAMRYTECRLEAL EAMLL+DLEQDTVD+VPNFDNSQKEPSLL
Sbjct: 177  PLIRGHGNFGSMDADPPAAMRYTECRLEALAEAMLLSDLEQDTVDFVPNFDNSQKEPSLL 236

Query: 947  PARIPNLLLNGASGIAVGMATNIPPHNLGELVDALSVLIHNPEATLQELLEYMPGPDFPT 1126
            PARIPNLLLNGASGIAVGMATNIPPHNLGELVDALSVLIHNPEATLQELLEYMPGPDFPT
Sbjct: 237  PARIPNLLLNGASGIAVGMATNIPPHNLGELVDALSVLIHNPEATLQELLEYMPGPDFPT 296

Query: 1127 GGIIMGNLGILEAYRTGRGRVVIRGKTD 1210
            GGIIMGN GIL+AYRTGRGRVVIRGKTD
Sbjct: 297  GGIIMGNTGILDAYRTGRGRVVIRGKTD 324


>ref|XP_011078973.1| PREDICTED: DNA gyrase subunit A, chloroplastic/mitochondrial [Sesamum
            indicum]
          Length = 939

 Score =  939 bits (2428), Expect = 0.0
 Identities = 491/561 (87%), Positives = 507/561 (90%)
 Frame = +3

Query: 1230 NKASLVEKIAELVENKILEGISDIRDESDRSGMRIVIEVKRGSDPSIVLNNLHHLTALQS 1409
            NKASLVEKIAELVENK LEGISDIRDESDRSGMRIVIE+KRGSDPSIVLNNL+ LTALQS
Sbjct: 376  NKASLVEKIAELVENKSLEGISDIRDESDRSGMRIVIELKRGSDPSIVLNNLYRLTALQS 435

Query: 1410 TFSCNMVGILNGQPKQMGLKELLQAFLDFRCSVVERRAKFKLSQAQDRYHIVEGIIIGLD 1589
            TFSCNMVGILNGQPKQMGLKELLQAFLDFRCSVVERRAKFKLSQAQDRYHIVEGII GLD
Sbjct: 436  TFSCNMVGILNGQPKQMGLKELLQAFLDFRCSVVERRAKFKLSQAQDRYHIVEGIIAGLD 495

Query: 1590 NLDRVIDVIRKASSHVLAATNLREEFSLTDKQAEAILDISLRKLTSLEKNKFIDEGNSLS 1769
            NLDRVID+IRKASSHV+AATNLREEF+L+DKQAEAILDISLRKLTSLEKNKFIDEG SLS
Sbjct: 496  NLDRVIDIIRKASSHVVAATNLREEFNLSDKQAEAILDISLRKLTSLEKNKFIDEGKSLS 555

Query: 1770 RXXXXXXXXXXXXXXXXXVIEAEANEIKNKFFTPRRSMLEDTDSGQLEDIDVIPNEEMLL 1949
                              +IE EA EIKNKF TPRRS+LEDTDSGQLEDIDVIPNEEMLL
Sbjct: 556  EQISKLQELLSSKELILELIEDEAKEIKNKFSTPRRSVLEDTDSGQLEDIDVIPNEEMLL 615

Query: 1950 ALSEKGYLKRMRPDTFNLQNRGTIGKSVGKLRVNDTMSDFIVCRTHDHVLYFSDKGTVYS 2129
            ALS KGYLKRMRPDTFNL                    DF+VCRTHDHVLYFSDKG VYS
Sbjct: 616  ALSGKGYLKRMRPDTFNLMT-----------------PDFLVCRTHDHVLYFSDKGIVYS 658

Query: 2130 ARAYKIPECSRAGAGTPLIQILSLSDGERVTSIIPVSEFEGDQYLMMLTMKGYIKKVSLN 2309
            ARAYKIPECSRAGAGTPL+QILSLSDGER+TSIIPVSEFEGDQYLMMLTMKGYIKKVSLN
Sbjct: 659  ARAYKIPECSRAGAGTPLVQILSLSDGERITSIIPVSEFEGDQYLMMLTMKGYIKKVSLN 718

Query: 2310 YFSSIRSTGIIAIQLVPGDELKWVRRCTNDDFVAMASQNGMVILSPCENIRALGRNTRGG 2489
            YFSSIRSTGIIAIQLVPGDELKWVRRCTNDD+VAMAS NGMVILSPCENIRALGRNTRGG
Sbjct: 719  YFSSIRSTGIIAIQLVPGDELKWVRRCTNDDYVAMASHNGMVILSPCENIRALGRNTRGG 778

Query: 2490 VAMRLKQGDKMASMDIIPASFGQKLEKGSETQQTHGKGYTGPWLLFISESGFGKRVPLAS 2669
            VAMRLKQGDKMASMD+IPAS G+ LEK SETQ THG+G TGPWLLFISESG+GKRVPLAS
Sbjct: 779  VAMRLKQGDKMASMDLIPASLGKMLEKCSETQHTHGRGSTGPWLLFISESGYGKRVPLAS 838

Query: 2670 FRMSPLNRVGLKGYKFSLEDRLAAVFVVGFSVGEDGESDEQVVLVSQSGTVNRIKVRDIS 2849
            FRMS LNRVGLKGYKFSLEDRLAAVFVVGFSVGEDGESDEQVVLVSQSGTVNRIKVRDIS
Sbjct: 839  FRMSRLNRVGLKGYKFSLEDRLAAVFVVGFSVGEDGESDEQVVLVSQSGTVNRIKVRDIS 898

Query: 2850 IQSRFARGVILMRLEHAGKIQ 2912
            IQSRFARGVILMRLEHAGKIQ
Sbjct: 899  IQSRFARGVILMRLEHAGKIQ 919



 Score =  561 bits (1446), Expect = 0.0
 Identities = 285/353 (80%), Positives = 297/353 (84%)
 Frame = +2

Query: 152  MNPCSIQPGAHFGPPNPIPEPAKPHMAFATGLRLLRSHPHTLSFSLTAPSRLLLARRVSE 331
            M P  I P  HFGP NP PEPA   MAF+TGLRLLR HPH+LSF   +P RLLLARRVSE
Sbjct: 1    MKPYCIAPRTHFGPLNPRPEPATSPMAFSTGLRLLRCHPHSLSFCRPSPPRLLLARRVSE 60

Query: 332  LRFLSAVGPHQRRRLFXXXXXXXXXXXXXXXXXXXXXXRDVXXXXXXXXXXRIVVTELHK 511
            LRFL AV PH R R F                      RD           RIV++ELHK
Sbjct: 61   LRFLYAVAPHHRSRFFSVQASARAEEEDVEENGSVVAVRDGGGNGGEGGEGRIVISELHK 120

Query: 512  EATEAYMSYAMSVLLGRALPDVRDGLKPVHRRILYAMHELGLSSKKPYKKCARVVGEVLG 691
            EATEAYM+YAMSVLLGRALPDVRDGLKPVHRRILYAMHELGLSS+KPYKKCARVVGEVLG
Sbjct: 121  EATEAYMAYAMSVLLGRALPDVRDGLKPVHRRILYAMHELGLSSRKPYKKCARVVGEVLG 180

Query: 692  KFHPHGDSAVYDSLVRMAQDFSLRSPLIRGHGNFGSIDADPAAAMRYTECRLEALTEAML 871
            KFHPHGD+AVYDSLVRMAQDFSLRSPLIRGHGNFGSIDADP AAMRYTECRLEAL EAML
Sbjct: 181  KFHPHGDNAVYDSLVRMAQDFSLRSPLIRGHGNFGSIDADPPAAMRYTECRLEALAEAML 240

Query: 872  LADLEQDTVDYVPNFDNSQKEPSLLPARIPNLLLNGASGIAVGMATNIPPHNLGELVDAL 1051
            LADLEQDTVD+VPNFDNSQKEPSLLPARIPNLLLNGASGIAVGMATNIPPHNLGELVDAL
Sbjct: 241  LADLEQDTVDFVPNFDNSQKEPSLLPARIPNLLLNGASGIAVGMATNIPPHNLGELVDAL 300

Query: 1052 SVLIHNPEATLQELLEYMPGPDFPTGGIIMGNLGILEAYRTGRGRVVIRGKTD 1210
            SVLIHNP+ATLQELLEYMPGPDFPTGGI+MGN+GILEAYRTGRGRVVIRGKTD
Sbjct: 301  SVLIHNPDATLQELLEYMPGPDFPTGGIVMGNIGILEAYRTGRGRVVIRGKTD 353


>ref|XP_009788233.1| PREDICTED: DNA gyrase subunit A, chloroplastic/mitochondrial isoform
            X1 [Nicotiana sylvestris]
          Length = 949

 Score =  888 bits (2295), Expect(2) = 0.0
 Identities = 454/561 (80%), Positives = 501/561 (89%)
 Frame = +3

Query: 1230 NKASLVEKIAELVENKILEGISDIRDESDRSGMRIVIEVKRGSDPSIVLNNLHHLTALQS 1409
            NKASLVEKIA+LVENKILEG+SDIRDESDRSGMRIVIE+KRGSDP+IVLNNL+ LTALQS
Sbjct: 367  NKASLVEKIADLVENKILEGVSDIRDESDRSGMRIVIELKRGSDPAIVLNNLYRLTALQS 426

Query: 1410 TFSCNMVGILNGQPKQMGLKELLQAFLDFRCSVVERRAKFKLSQAQDRYHIVEGIIIGLD 1589
            +FSCNMVGILNGQPK MGLKELLQAFLDFRCSVVERRAKFKLSQAQ+R HIVEGII+GLD
Sbjct: 427  SFSCNMVGILNGQPKLMGLKELLQAFLDFRCSVVERRAKFKLSQAQERNHIVEGIIVGLD 486

Query: 1590 NLDRVIDVIRKASSHVLAATNLREEFSLTDKQAEAILDISLRKLTSLEKNKFIDEGNSLS 1769
            NLD VI+ IRKASS+ LAA +LR+EF L++KQAEAILDISLR+LT+LE+NKF++EG SL 
Sbjct: 487  NLDEVINTIRKASSNALAAASLRKEFELSEKQAEAILDISLRRLTALERNKFVEEGKSLR 546

Query: 1770 RXXXXXXXXXXXXXXXXXVIEAEANEIKNKFFTPRRSMLEDTDSGQLEDIDVIPNEEMLL 1949
                              +IE EA EIKNKFFTPRRSMLEDTDSG+LEDIDVIPNEEMLL
Sbjct: 547  TQISKLEELLSSKKQILQLIEEEAIEIKNKFFTPRRSMLEDTDSGELEDIDVIPNEEMLL 606

Query: 1950 ALSEKGYLKRMRPDTFNLQNRGTIGKSVGKLRVNDTMSDFIVCRTHDHVLYFSDKGTVYS 2129
            A+SEKGY+KRM+PDTFNLQNRGTIGKSVGKLRVND MSDF+VCR HD VLYFSDKGTVYS
Sbjct: 607  AISEKGYVKRMKPDTFNLQNRGTIGKSVGKLRVNDAMSDFLVCRAHDKVLYFSDKGTVYS 666

Query: 2130 ARAYKIPECSRAGAGTPLIQILSLSDGERVTSIIPVSEFEGDQYLMMLTMKGYIKKVSLN 2309
            + AYKIPECSR  AGTPL+QILSLSDGER+TSIIPVSEF GDQYL+MLT+ GYIKKVSLN
Sbjct: 667  SPAYKIPECSRTAAGTPLVQILSLSDGERITSIIPVSEFAGDQYLVMLTVNGYIKKVSLN 726

Query: 2310 YFSSIRSTGIIAIQLVPGDELKWVRRCTNDDFVAMASQNGMVILSPCENIRALGRNTRGG 2489
            YF+SIR TGIIAIQLVPGDELKWV+ C+N+DFVAMASQNGMVIL+PC NIRALGRNTRG 
Sbjct: 727  YFASIRCTGIIAIQLVPGDELKWVKCCSNNDFVAMASQNGMVILTPCANIRALGRNTRGS 786

Query: 2490 VAMRLKQGDKMASMDIIPASFGQKLEKGSETQQTHGKGYTGPWLLFISESGFGKRVPLAS 2669
            VAMRLK+GDK+ASMDIIP +  ++L+K  E  Q   +   GPWLLF+SESG GKRVP++ 
Sbjct: 787  VAMRLKEGDKVASMDIIPDALQKELDKTLEVNQRQRRSMKGPWLLFVSESGCGKRVPVSR 846

Query: 2670 FRMSPLNRVGLKGYKFSLEDRLAAVFVVGFSVGEDGESDEQVVLVSQSGTVNRIKVRDIS 2849
            FR SPLNRVGL GYKFS EDRLAAVFVVGFS+GEDGESDEQVVLVSQSGTVNRIKVRDIS
Sbjct: 847  FRTSPLNRVGLIGYKFSSEDRLAAVFVVGFSLGEDGESDEQVVLVSQSGTVNRIKVRDIS 906

Query: 2850 IQSRFARGVILMRLEHAGKIQ 2912
            IQSR+ARGVILMRLEHAGKIQ
Sbjct: 907  IQSRYARGVILMRLEHAGKIQ 927



 Score =  494 bits (1272), Expect(2) = 0.0
 Identities = 258/329 (78%), Positives = 276/329 (83%), Gaps = 1/329 (0%)
 Frame = +2

Query: 227  MAFATGLRLLRSHPHTLSFSLTAPSRLLLARRVS-ELRFLSAVGPHQRRRLFXXXXXXXX 403
            MAF+TG+RLLR + H  +F+ T PSR    R+ S ELR LS+V P  R++L         
Sbjct: 18   MAFSTGIRLLRCYHHHFTFTAT-PSRFSGLRKTSSELRLLSSVTPPPRKQL-RPVSARRK 75

Query: 404  XXXXXXXXXXXXXXRDVXXXXXXXXXXRIVVTELHKEATEAYMSYAMSVLLGRALPDVRD 583
                           D           R+V+TELHKEATEAYMSYAMSVLLGRALPDVRD
Sbjct: 76   EEEVGDEGNGSVILTDRGENEGGNGGERVVLTELHKEATEAYMSYAMSVLLGRALPDVRD 135

Query: 584  GLKPVHRRILYAMHELGLSSKKPYKKCARVVGEVLGKFHPHGDSAVYDSLVRMAQDFSLR 763
            GLKPVHRRILYAMHELG+SSKKPYKKCARVVGEVLGKFHPHGD+AVYDSLVRMAQDFSLR
Sbjct: 136  GLKPVHRRILYAMHELGISSKKPYKKCARVVGEVLGKFHPHGDTAVYDSLVRMAQDFSLR 195

Query: 764  SPLIRGHGNFGSIDADPAAAMRYTECRLEALTEAMLLADLEQDTVDYVPNFDNSQKEPSL 943
            SPLIRGHGNFGSIDADP AAMRYTECRLEALTE+MLLADLEQ+TVD+VPNFDNSQKEPSL
Sbjct: 196  SPLIRGHGNFGSIDADPPAAMRYTECRLEALTESMLLADLEQNTVDFVPNFDNSQKEPSL 255

Query: 944  LPARIPNLLLNGASGIAVGMATNIPPHNLGELVDALSVLIHNPEATLQELLEYMPGPDFP 1123
            LPAR+PNLLLNGASGIAVGMATNIPPHNLGELVDALS LIHNPEATLQELLEYMPGPDFP
Sbjct: 256  LPARVPNLLLNGASGIAVGMATNIPPHNLGELVDALSALIHNPEATLQELLEYMPGPDFP 315

Query: 1124 TGGIIMGNLGILEAYRTGRGRVVIRGKTD 1210
            TGGIIMGN+GILEAYRTGRGRVVIRGKTD
Sbjct: 316  TGGIIMGNIGILEAYRTGRGRVVIRGKTD 344


>ref|XP_009617006.1| PREDICTED: DNA gyrase subunit A, chloroplastic/mitochondrial isoform
            X1 [Nicotiana tomentosiformis]
          Length = 949

 Score =  887 bits (2292), Expect(2) = 0.0
 Identities = 454/561 (80%), Positives = 498/561 (88%)
 Frame = +3

Query: 1230 NKASLVEKIAELVENKILEGISDIRDESDRSGMRIVIEVKRGSDPSIVLNNLHHLTALQS 1409
            NKASLVEKIA LVENKILEG+SDIRDESDRSGMRIVIE+KRGSDP+IVLNNL+ LTALQS
Sbjct: 367  NKASLVEKIANLVENKILEGVSDIRDESDRSGMRIVIELKRGSDPAIVLNNLYRLTALQS 426

Query: 1410 TFSCNMVGILNGQPKQMGLKELLQAFLDFRCSVVERRAKFKLSQAQDRYHIVEGIIIGLD 1589
            +FSCNMVGILNGQPK MGLKELLQAFLDFRCSVVERRAKFKLSQAQ+R HIVEGIIIGLD
Sbjct: 427  SFSCNMVGILNGQPKLMGLKELLQAFLDFRCSVVERRAKFKLSQAQERDHIVEGIIIGLD 486

Query: 1590 NLDRVIDVIRKASSHVLAATNLREEFSLTDKQAEAILDISLRKLTSLEKNKFIDEGNSLS 1769
            NLD VI+ IRKASS+ LAA NLR+EF L++KQAEAILDISLR+LT+LE+NKF++EG SL 
Sbjct: 487  NLDEVINTIRKASSNALAAANLRKEFELSEKQAEAILDISLRRLTALERNKFVEEGKSLR 546

Query: 1770 RXXXXXXXXXXXXXXXXXVIEAEANEIKNKFFTPRRSMLEDTDSGQLEDIDVIPNEEMLL 1949
                              +IE EA EIKNKFFTPRRSMLEDTDSG+LEDID+IPNEEMLL
Sbjct: 547  AQISKLEELLSSKKQILQLIEEEAIEIKNKFFTPRRSMLEDTDSGELEDIDIIPNEEMLL 606

Query: 1950 ALSEKGYLKRMRPDTFNLQNRGTIGKSVGKLRVNDTMSDFIVCRTHDHVLYFSDKGTVYS 2129
            A+SEKGY+KRM+PDTFNLQNRGTIGKSVGKLRVND MSDF+VCR HD VLYFSDKGTVYS
Sbjct: 607  AISEKGYVKRMKPDTFNLQNRGTIGKSVGKLRVNDAMSDFLVCRAHDKVLYFSDKGTVYS 666

Query: 2130 ARAYKIPECSRAGAGTPLIQILSLSDGERVTSIIPVSEFEGDQYLMMLTMKGYIKKVSLN 2309
            A AYKIPECSR  AGTPL+QILSLSDGER+TSIIPVSEF GDQYL+MLT+ GYIKKVSLN
Sbjct: 667  APAYKIPECSRTAAGTPLVQILSLSDGERITSIIPVSEFAGDQYLVMLTVNGYIKKVSLN 726

Query: 2310 YFSSIRSTGIIAIQLVPGDELKWVRRCTNDDFVAMASQNGMVILSPCENIRALGRNTRGG 2489
            YF+SIR TGIIAIQLVPGDELKWV+ C+N+DFVAMASQNGMVIL+PC NIRALGRNTRG 
Sbjct: 727  YFASIRCTGIIAIQLVPGDELKWVKCCSNNDFVAMASQNGMVILTPCANIRALGRNTRGS 786

Query: 2490 VAMRLKQGDKMASMDIIPASFGQKLEKGSETQQTHGKGYTGPWLLFISESGFGKRVPLAS 2669
            VAMRLK  DK+ASMDIIP +  ++L+K  E  Q   +   GPWLLF+SESG+GKRVP++ 
Sbjct: 787  VAMRLKDEDKVASMDIIPDALQKELDKTLEVNQRQSRSINGPWLLFVSESGYGKRVPVSR 846

Query: 2670 FRMSPLNRVGLKGYKFSLEDRLAAVFVVGFSVGEDGESDEQVVLVSQSGTVNRIKVRDIS 2849
            FR SPLNRVGL GYKFS EDRLAAVFVVGFS+ EDGESDEQVVLVSQSGTVNRIKVRDIS
Sbjct: 847  FRTSPLNRVGLIGYKFSSEDRLAAVFVVGFSLAEDGESDEQVVLVSQSGTVNRIKVRDIS 906

Query: 2850 IQSRFARGVILMRLEHAGKIQ 2912
            IQSR+ARGVILMRLEHAGKIQ
Sbjct: 907  IQSRYARGVILMRLEHAGKIQ 927



 Score =  499 bits (1286), Expect(2) = 0.0
 Identities = 262/329 (79%), Positives = 277/329 (84%), Gaps = 1/329 (0%)
 Frame = +2

Query: 227  MAFATGLRLLRSHPHTLSFSLTAPSRLLLARRVS-ELRFLSAVGPHQRRRLFXXXXXXXX 403
            MAF+TG+RLLR + H  +F+ T PSR    R+ S ELRFLS+V P  R++L         
Sbjct: 18   MAFSTGIRLLRCYHHHFTFTAT-PSRFSGLRKTSSELRFLSSVTPPPRKQL-RPVSARRK 75

Query: 404  XXXXXXXXXXXXXXRDVXXXXXXXXXXRIVVTELHKEATEAYMSYAMSVLLGRALPDVRD 583
                          RD           R+V TELHKEATEAYMSYAMSVLLGRALPDVRD
Sbjct: 76   EEEAGYEGNGSVILRDRGENEGGNGGERVVPTELHKEATEAYMSYAMSVLLGRALPDVRD 135

Query: 584  GLKPVHRRILYAMHELGLSSKKPYKKCARVVGEVLGKFHPHGDSAVYDSLVRMAQDFSLR 763
            GLKPVHRRILYAMHELGLSSKKPYKKCARVVGEVLGKFHPHGD+AVYDSLVRMAQDFSLR
Sbjct: 136  GLKPVHRRILYAMHELGLSSKKPYKKCARVVGEVLGKFHPHGDTAVYDSLVRMAQDFSLR 195

Query: 764  SPLIRGHGNFGSIDADPAAAMRYTECRLEALTEAMLLADLEQDTVDYVPNFDNSQKEPSL 943
            SPLIRGHGNFGSIDADP AAMRYTECRLEALTEAMLLADLEQ+TVD+VPNFDNSQKEPSL
Sbjct: 196  SPLIRGHGNFGSIDADPPAAMRYTECRLEALTEAMLLADLEQNTVDFVPNFDNSQKEPSL 255

Query: 944  LPARIPNLLLNGASGIAVGMATNIPPHNLGELVDALSVLIHNPEATLQELLEYMPGPDFP 1123
            LPAR+PNLLLNGASGIAVGMATNIPPHNLGELVDALS LIHNPEATLQELLEYMPGPDFP
Sbjct: 256  LPARVPNLLLNGASGIAVGMATNIPPHNLGELVDALSALIHNPEATLQELLEYMPGPDFP 315

Query: 1124 TGGIIMGNLGILEAYRTGRGRVVIRGKTD 1210
            TGGIIMGN+GILEAYRTGRGRVVIRGKTD
Sbjct: 316  TGGIIMGNIGILEAYRTGRGRVVIRGKTD 344


>ref|XP_009617007.1| PREDICTED: DNA gyrase subunit A, chloroplastic/mitochondrial isoform
            X2 [Nicotiana tomentosiformis]
          Length = 948

 Score =  882 bits (2280), Expect(2) = 0.0
 Identities = 454/561 (80%), Positives = 498/561 (88%)
 Frame = +3

Query: 1230 NKASLVEKIAELVENKILEGISDIRDESDRSGMRIVIEVKRGSDPSIVLNNLHHLTALQS 1409
            NKASLVEKIA LVENKILEG+SDIRDESDRSGMRIVIE+KRGSDP+IVLNNL+ LTALQS
Sbjct: 367  NKASLVEKIANLVENKILEGVSDIRDESDRSGMRIVIELKRGSDPAIVLNNLYRLTALQS 426

Query: 1410 TFSCNMVGILNGQPKQMGLKELLQAFLDFRCSVVERRAKFKLSQAQDRYHIVEGIIIGLD 1589
            +FSCNMVGILNGQPK MGLKELLQAFLDFRCSVVERRAKFKLSQAQ+R HIVEGIIIGLD
Sbjct: 427  SFSCNMVGILNGQPKLMGLKELLQAFLDFRCSVVERRAKFKLSQAQERDHIVEGIIIGLD 486

Query: 1590 NLDRVIDVIRKASSHVLAATNLREEFSLTDKQAEAILDISLRKLTSLEKNKFIDEGNSLS 1769
            NLD VI+ IRKASS+ LAA NLR+EF L++KQAEAILDISLR+LT+LE+NKF++EG SL 
Sbjct: 487  NLDEVINTIRKASSNALAAANLRKEFELSEKQAEAILDISLRRLTALERNKFVEEGKSLR 546

Query: 1770 RXXXXXXXXXXXXXXXXXVIEAEANEIKNKFFTPRRSMLEDTDSGQLEDIDVIPNEEMLL 1949
                              +IE EA EIKNKFFTPRRSMLEDTDSG+LEDID+IPNEEMLL
Sbjct: 547  AQISKLEELLSSKKQILQLIEEEAIEIKNKFFTPRRSMLEDTDSGELEDIDIIPNEEMLL 606

Query: 1950 ALSEKGYLKRMRPDTFNLQNRGTIGKSVGKLRVNDTMSDFIVCRTHDHVLYFSDKGTVYS 2129
            A+SEKGY+KRM+PDTFNLQNRGTIGKSVGKLRVND MSDF+VCR HD VLYFSDKGTVYS
Sbjct: 607  AISEKGYVKRMKPDTFNLQNRGTIGKSVGKLRVNDAMSDFLVCRAHDKVLYFSDKGTVYS 666

Query: 2130 ARAYKIPECSRAGAGTPLIQILSLSDGERVTSIIPVSEFEGDQYLMMLTMKGYIKKVSLN 2309
            A AYKIPECSR  AGTPL+QILSLSDGER+TSIIPVSEF GDQYL+MLT+ GYIKKVSLN
Sbjct: 667  APAYKIPECSRTAAGTPLVQILSLSDGERITSIIPVSEFAGDQYLVMLTVNGYIKKVSLN 726

Query: 2310 YFSSIRSTGIIAIQLVPGDELKWVRRCTNDDFVAMASQNGMVILSPCENIRALGRNTRGG 2489
            YF+SIR TGIIAIQLVPGDELKWV+ C+N+DFVAMASQNGMVIL+PC NIRALGRNTRG 
Sbjct: 727  YFASIRCTGIIAIQLVPGDELKWVKCCSNNDFVAMASQNGMVILTPCANIRALGRNTRGS 786

Query: 2490 VAMRLKQGDKMASMDIIPASFGQKLEKGSETQQTHGKGYTGPWLLFISESGFGKRVPLAS 2669
            VAMRLK  DK+ASMDIIP +  ++L+K  E  Q   +   GPWLLF+SESG+GKRVP++ 
Sbjct: 787  VAMRLKDEDKVASMDIIPDALQKELDKTLEVNQRQSRSINGPWLLFVSESGYGKRVPVSR 846

Query: 2670 FRMSPLNRVGLKGYKFSLEDRLAAVFVVGFSVGEDGESDEQVVLVSQSGTVNRIKVRDIS 2849
            FR SPLNRVGL GYKFS EDRLAAVFVVGFS+ EDGESDEQVVLVSQSGTVNRIKVRDIS
Sbjct: 847  FRTSPLNRVGLIGYKFSSEDRLAAVFVVGFSL-EDGESDEQVVLVSQSGTVNRIKVRDIS 905

Query: 2850 IQSRFARGVILMRLEHAGKIQ 2912
            IQSR+ARGVILMRLEHAGKIQ
Sbjct: 906  IQSRYARGVILMRLEHAGKIQ 926



 Score =  499 bits (1286), Expect(2) = 0.0
 Identities = 262/329 (79%), Positives = 277/329 (84%), Gaps = 1/329 (0%)
 Frame = +2

Query: 227  MAFATGLRLLRSHPHTLSFSLTAPSRLLLARRVS-ELRFLSAVGPHQRRRLFXXXXXXXX 403
            MAF+TG+RLLR + H  +F+ T PSR    R+ S ELRFLS+V P  R++L         
Sbjct: 18   MAFSTGIRLLRCYHHHFTFTAT-PSRFSGLRKTSSELRFLSSVTPPPRKQL-RPVSARRK 75

Query: 404  XXXXXXXXXXXXXXRDVXXXXXXXXXXRIVVTELHKEATEAYMSYAMSVLLGRALPDVRD 583
                          RD           R+V TELHKEATEAYMSYAMSVLLGRALPDVRD
Sbjct: 76   EEEAGYEGNGSVILRDRGENEGGNGGERVVPTELHKEATEAYMSYAMSVLLGRALPDVRD 135

Query: 584  GLKPVHRRILYAMHELGLSSKKPYKKCARVVGEVLGKFHPHGDSAVYDSLVRMAQDFSLR 763
            GLKPVHRRILYAMHELGLSSKKPYKKCARVVGEVLGKFHPHGD+AVYDSLVRMAQDFSLR
Sbjct: 136  GLKPVHRRILYAMHELGLSSKKPYKKCARVVGEVLGKFHPHGDTAVYDSLVRMAQDFSLR 195

Query: 764  SPLIRGHGNFGSIDADPAAAMRYTECRLEALTEAMLLADLEQDTVDYVPNFDNSQKEPSL 943
            SPLIRGHGNFGSIDADP AAMRYTECRLEALTEAMLLADLEQ+TVD+VPNFDNSQKEPSL
Sbjct: 196  SPLIRGHGNFGSIDADPPAAMRYTECRLEALTEAMLLADLEQNTVDFVPNFDNSQKEPSL 255

Query: 944  LPARIPNLLLNGASGIAVGMATNIPPHNLGELVDALSVLIHNPEATLQELLEYMPGPDFP 1123
            LPAR+PNLLLNGASGIAVGMATNIPPHNLGELVDALS LIHNPEATLQELLEYMPGPDFP
Sbjct: 256  LPARVPNLLLNGASGIAVGMATNIPPHNLGELVDALSALIHNPEATLQELLEYMPGPDFP 315

Query: 1124 TGGIIMGNLGILEAYRTGRGRVVIRGKTD 1210
            TGGIIMGN+GILEAYRTGRGRVVIRGKTD
Sbjct: 316  TGGIIMGNIGILEAYRTGRGRVVIRGKTD 344


>ref|XP_009788234.1| PREDICTED: DNA gyrase subunit A, chloroplastic/mitochondrial isoform
            X2 [Nicotiana sylvestris]
          Length = 948

 Score =  882 bits (2278), Expect(2) = 0.0
 Identities = 453/561 (80%), Positives = 500/561 (89%)
 Frame = +3

Query: 1230 NKASLVEKIAELVENKILEGISDIRDESDRSGMRIVIEVKRGSDPSIVLNNLHHLTALQS 1409
            NKASLVEKIA+LVENKILEG+SDIRDESDRSGMRIVIE+KRGSDP+IVLNNL+ LTALQS
Sbjct: 367  NKASLVEKIADLVENKILEGVSDIRDESDRSGMRIVIELKRGSDPAIVLNNLYRLTALQS 426

Query: 1410 TFSCNMVGILNGQPKQMGLKELLQAFLDFRCSVVERRAKFKLSQAQDRYHIVEGIIIGLD 1589
            +FSCNMVGILNGQPK MGLKELLQAFLDFRCSVVERRAKFKLSQAQ+R HIVEGII+GLD
Sbjct: 427  SFSCNMVGILNGQPKLMGLKELLQAFLDFRCSVVERRAKFKLSQAQERNHIVEGIIVGLD 486

Query: 1590 NLDRVIDVIRKASSHVLAATNLREEFSLTDKQAEAILDISLRKLTSLEKNKFIDEGNSLS 1769
            NLD VI+ IRKASS+ LAA +LR+EF L++KQAEAILDISLR+LT+LE+NKF++EG SL 
Sbjct: 487  NLDEVINTIRKASSNALAAASLRKEFELSEKQAEAILDISLRRLTALERNKFVEEGKSLR 546

Query: 1770 RXXXXXXXXXXXXXXXXXVIEAEANEIKNKFFTPRRSMLEDTDSGQLEDIDVIPNEEMLL 1949
                              +IE EA EIKNKFFTPRRSMLEDTDSG+LEDIDVIPNEEMLL
Sbjct: 547  TQISKLEELLSSKKQILQLIEEEAIEIKNKFFTPRRSMLEDTDSGELEDIDVIPNEEMLL 606

Query: 1950 ALSEKGYLKRMRPDTFNLQNRGTIGKSVGKLRVNDTMSDFIVCRTHDHVLYFSDKGTVYS 2129
            A+SEKGY+KRM+PDTFNLQNRGTIGKSVGKLRVND MSDF+VCR HD VLYFSDKGTVYS
Sbjct: 607  AISEKGYVKRMKPDTFNLQNRGTIGKSVGKLRVNDAMSDFLVCRAHDKVLYFSDKGTVYS 666

Query: 2130 ARAYKIPECSRAGAGTPLIQILSLSDGERVTSIIPVSEFEGDQYLMMLTMKGYIKKVSLN 2309
            + AYKIPECSR  AGTPL+QILSLSDGER+TSIIPVSEF GDQYL+MLT+ GYIKKVSLN
Sbjct: 667  SPAYKIPECSRTAAGTPLVQILSLSDGERITSIIPVSEFAGDQYLVMLTVNGYIKKVSLN 726

Query: 2310 YFSSIRSTGIIAIQLVPGDELKWVRRCTNDDFVAMASQNGMVILSPCENIRALGRNTRGG 2489
            YF+SIR TGIIAIQLVPGDELKWV+ C+N+DFVAMASQNGMVIL+PC NIRALGRNTRG 
Sbjct: 727  YFASIRCTGIIAIQLVPGDELKWVKCCSNNDFVAMASQNGMVILTPCANIRALGRNTRGS 786

Query: 2490 VAMRLKQGDKMASMDIIPASFGQKLEKGSETQQTHGKGYTGPWLLFISESGFGKRVPLAS 2669
            VAMRLK+GDK+ASMDIIP +  ++L+K  E  Q   +   GPWLLF+SESG GKRVP++ 
Sbjct: 787  VAMRLKEGDKVASMDIIPDALQKELDKTLEVNQRQRRSMKGPWLLFVSESGCGKRVPVSR 846

Query: 2670 FRMSPLNRVGLKGYKFSLEDRLAAVFVVGFSVGEDGESDEQVVLVSQSGTVNRIKVRDIS 2849
            FR SPLNRVGL GYKFS EDRLAAVFVVGFS+G DGESDEQVVLVSQSGTVNRIKVRDIS
Sbjct: 847  FRTSPLNRVGLIGYKFSSEDRLAAVFVVGFSLG-DGESDEQVVLVSQSGTVNRIKVRDIS 905

Query: 2850 IQSRFARGVILMRLEHAGKIQ 2912
            IQSR+ARGVILMRLEHAGKIQ
Sbjct: 906  IQSRYARGVILMRLEHAGKIQ 926



 Score =  494 bits (1272), Expect(2) = 0.0
 Identities = 258/329 (78%), Positives = 276/329 (83%), Gaps = 1/329 (0%)
 Frame = +2

Query: 227  MAFATGLRLLRSHPHTLSFSLTAPSRLLLARRVS-ELRFLSAVGPHQRRRLFXXXXXXXX 403
            MAF+TG+RLLR + H  +F+ T PSR    R+ S ELR LS+V P  R++L         
Sbjct: 18   MAFSTGIRLLRCYHHHFTFTAT-PSRFSGLRKTSSELRLLSSVTPPPRKQL-RPVSARRK 75

Query: 404  XXXXXXXXXXXXXXRDVXXXXXXXXXXRIVVTELHKEATEAYMSYAMSVLLGRALPDVRD 583
                           D           R+V+TELHKEATEAYMSYAMSVLLGRALPDVRD
Sbjct: 76   EEEVGDEGNGSVILTDRGENEGGNGGERVVLTELHKEATEAYMSYAMSVLLGRALPDVRD 135

Query: 584  GLKPVHRRILYAMHELGLSSKKPYKKCARVVGEVLGKFHPHGDSAVYDSLVRMAQDFSLR 763
            GLKPVHRRILYAMHELG+SSKKPYKKCARVVGEVLGKFHPHGD+AVYDSLVRMAQDFSLR
Sbjct: 136  GLKPVHRRILYAMHELGISSKKPYKKCARVVGEVLGKFHPHGDTAVYDSLVRMAQDFSLR 195

Query: 764  SPLIRGHGNFGSIDADPAAAMRYTECRLEALTEAMLLADLEQDTVDYVPNFDNSQKEPSL 943
            SPLIRGHGNFGSIDADP AAMRYTECRLEALTE+MLLADLEQ+TVD+VPNFDNSQKEPSL
Sbjct: 196  SPLIRGHGNFGSIDADPPAAMRYTECRLEALTESMLLADLEQNTVDFVPNFDNSQKEPSL 255

Query: 944  LPARIPNLLLNGASGIAVGMATNIPPHNLGELVDALSVLIHNPEATLQELLEYMPGPDFP 1123
            LPAR+PNLLLNGASGIAVGMATNIPPHNLGELVDALS LIHNPEATLQELLEYMPGPDFP
Sbjct: 256  LPARVPNLLLNGASGIAVGMATNIPPHNLGELVDALSALIHNPEATLQELLEYMPGPDFP 315

Query: 1124 TGGIIMGNLGILEAYRTGRGRVVIRGKTD 1210
            TGGIIMGN+GILEAYRTGRGRVVIRGKTD
Sbjct: 316  TGGIIMGNIGILEAYRTGRGRVVIRGKTD 344


>sp|Q5YLB5.1|GYRA_NICBE RecName: Full=DNA gyrase subunit A, chloroplastic/mitochondrial;
            Flags: Precursor gi|38017093|gb|AAR07942.1| DNA gyrase A
            subunit [Nicotiana benthamiana]
          Length = 935

 Score =  880 bits (2273), Expect(2) = 0.0
 Identities = 450/561 (80%), Positives = 498/561 (88%)
 Frame = +3

Query: 1230 NKASLVEKIAELVENKILEGISDIRDESDRSGMRIVIEVKRGSDPSIVLNNLHHLTALQS 1409
            NKASLVEKIA+LVENKILEG+SDIRDESDRSGMRIVIE+KRGSDP+IVLNNL+ LTALQS
Sbjct: 353  NKASLVEKIADLVENKILEGVSDIRDESDRSGMRIVIELKRGSDPAIVLNNLYRLTALQS 412

Query: 1410 TFSCNMVGILNGQPKQMGLKELLQAFLDFRCSVVERRAKFKLSQAQDRYHIVEGIIIGLD 1589
            +FSCNMVGILNGQPK MGLKELLQAFLDFRCSVVERRA+FKLSQAQ+R HIVEGII+GLD
Sbjct: 413  SFSCNMVGILNGQPKLMGLKELLQAFLDFRCSVVERRARFKLSQAQERNHIVEGIIVGLD 472

Query: 1590 NLDRVIDVIRKASSHVLAATNLREEFSLTDKQAEAILDISLRKLTSLEKNKFIDEGNSLS 1769
            NLD VI+ IRKASS+ LAA +LR+EF L++KQAEAILDISLR+LT+LE+NKF++EG SL 
Sbjct: 473  NLDEVINTIRKASSNALAAASLRKEFELSEKQAEAILDISLRRLTALERNKFVEEGKSLR 532

Query: 1770 RXXXXXXXXXXXXXXXXXVIEAEANEIKNKFFTPRRSMLEDTDSGQLEDIDVIPNEEMLL 1949
                              +IE EA EIKNKFF PRRSMLEDTDSG LEDIDVIPNEEMLL
Sbjct: 533  TQISKLEELLSSKKQILQLIEEEAIEIKNKFFNPRRSMLEDTDSGDLEDIDVIPNEEMLL 592

Query: 1950 ALSEKGYLKRMRPDTFNLQNRGTIGKSVGKLRVNDTMSDFIVCRTHDHVLYFSDKGTVYS 2129
            A+SEKGY+KRM+PDTFNLQNRGTIGKSVGKLRVND MSDF+VCR HD VLYFSDKGTVYS
Sbjct: 593  AISEKGYVKRMKPDTFNLQNRGTIGKSVGKLRVNDAMSDFLVCRAHDKVLYFSDKGTVYS 652

Query: 2130 ARAYKIPECSRAGAGTPLIQILSLSDGERVTSIIPVSEFEGDQYLMMLTMKGYIKKVSLN 2309
            + AYKIPECSR  AGTPL+QILSLSDGER+TSIIPVSEF  DQYL+MLT+ GYIKKVSLN
Sbjct: 653  SPAYKIPECSRTAAGTPLVQILSLSDGERITSIIPVSEFAADQYLVMLTVNGYIKKVSLN 712

Query: 2310 YFSSIRSTGIIAIQLVPGDELKWVRRCTNDDFVAMASQNGMVILSPCENIRALGRNTRGG 2489
            YF+SIR TGIIAIQLVP DELKWV+ C+N+DFVAMASQNGMVIL+PC NIRALGRNTRG 
Sbjct: 713  YFASIRCTGIIAIQLVPDDELKWVKCCSNNDFVAMASQNGMVILTPCANIRALGRNTRGS 772

Query: 2490 VAMRLKQGDKMASMDIIPASFGQKLEKGSETQQTHGKGYTGPWLLFISESGFGKRVPLAS 2669
            VAMRLK+GDK+ASMDIIP +  ++L+K  E QQ   +   GPWLLF+SESG+GKRVP++ 
Sbjct: 773  VAMRLKEGDKVASMDIIPDALQKELDKTLEVQQRQYRSMKGPWLLFVSESGYGKRVPVSR 832

Query: 2670 FRMSPLNRVGLKGYKFSLEDRLAAVFVVGFSVGEDGESDEQVVLVSQSGTVNRIKVRDIS 2849
            FR SPLNRVGL GYKFS ED LAAVFVVGFS+GEDGESDEQVVLVSQSGTVNRIKVRDIS
Sbjct: 833  FRTSPLNRVGLFGYKFSSEDCLAAVFVVGFSLGEDGESDEQVVLVSQSGTVNRIKVRDIS 892

Query: 2850 IQSRFARGVILMRLEHAGKIQ 2912
            IQSR+ARGVILMRLEHAGKIQ
Sbjct: 893  IQSRYARGVILMRLEHAGKIQ 913



 Score =  481 bits (1239), Expect(2) = 0.0
 Identities = 253/321 (78%), Positives = 268/321 (83%), Gaps = 1/321 (0%)
 Frame = +2

Query: 251  LLRSHPHTLSFSLTAPSRLLLARRVS-ELRFLSAVGPHQRRRLFXXXXXXXXXXXXXXXX 427
            L +S P   S  +T PSR    R+ S ELRFLS+V P  R++L                 
Sbjct: 12   LTQSKPMAFSTGIT-PSRFSGLRKTSSELRFLSSVTPPPRKQL-RPVSARRKEEEVGDEG 69

Query: 428  XXXXXXRDVXXXXXXXXXXRIVVTELHKEATEAYMSYAMSVLLGRALPDVRDGLKPVHRR 607
                  RD           R+V+TELHKEATEAYMSYAMSVLLGRALPDVRDGLKPVHRR
Sbjct: 70   NGSVILRDRGENEDRNGGERVVLTELHKEATEAYMSYAMSVLLGRALPDVRDGLKPVHRR 129

Query: 608  ILYAMHELGLSSKKPYKKCARVVGEVLGKFHPHGDSAVYDSLVRMAQDFSLRSPLIRGHG 787
            ILYAMHELGLSSKKPYKKCARVVGEVLGKFHPHGD+AVYDSLVRMAQDFSLRSPLIRGHG
Sbjct: 130  ILYAMHELGLSSKKPYKKCARVVGEVLGKFHPHGDTAVYDSLVRMAQDFSLRSPLIRGHG 189

Query: 788  NFGSIDADPAAAMRYTECRLEALTEAMLLADLEQDTVDYVPNFDNSQKEPSLLPARIPNL 967
            NFGSIDADP AAMRYTECRLEALTE+MLLADLEQ+TVD+VPNFDNSQKEPSLLPAR+PNL
Sbjct: 190  NFGSIDADPPAAMRYTECRLEALTESMLLADLEQNTVDFVPNFDNSQKEPSLLPARVPNL 249

Query: 968  LLNGASGIAVGMATNIPPHNLGELVDALSVLIHNPEATLQELLEYMPGPDFPTGGIIMGN 1147
            LLNGASGIAVGMATNIPPHNLGELVDALS LIHNPEATLQELLEYMPGPDFPTGGIIMGN
Sbjct: 250  LLNGASGIAVGMATNIPPHNLGELVDALSALIHNPEATLQELLEYMPGPDFPTGGIIMGN 309

Query: 1148 LGILEAYRTGRGRVVIRGKTD 1210
            +GILEA+RTGRGRVVIRGKTD
Sbjct: 310  IGILEAFRTGRGRVVIRGKTD 330


>ref|XP_015062059.1| PREDICTED: DNA gyrase subunit A, chloroplastic/mitochondrial isoform
            X1 [Solanum pennellii]
          Length = 953

 Score =  879 bits (2272), Expect(2) = 0.0
 Identities = 450/561 (80%), Positives = 494/561 (88%)
 Frame = +3

Query: 1230 NKASLVEKIAELVENKILEGISDIRDESDRSGMRIVIEVKRGSDPSIVLNNLHHLTALQS 1409
            NKASLVEKIA+LVENK LEG+SDIRDESDRSGMR+VIE+KRGSDP+IVLNNL+ LTALQS
Sbjct: 367  NKASLVEKIADLVENKTLEGVSDIRDESDRSGMRVVIELKRGSDPAIVLNNLYRLTALQS 426

Query: 1410 TFSCNMVGILNGQPKQMGLKELLQAFLDFRCSVVERRAKFKLSQAQDRYHIVEGIIIGLD 1589
            +FSCNMVGILNGQPK MGLKELLQAFLDFRCSVVERRAK+KLSQAQ+R HIVEGIIIGLD
Sbjct: 427  SFSCNMVGILNGQPKLMGLKELLQAFLDFRCSVVERRAKYKLSQAQERNHIVEGIIIGLD 486

Query: 1590 NLDRVIDVIRKASSHVLAATNLREEFSLTDKQAEAILDISLRKLTSLEKNKFIDEGNSLS 1769
            NLD VI+ IRKASSH LA  NLR+EF LT+KQAEAILDISLR+LT+LE+NKF+DEG SL 
Sbjct: 487  NLDEVINTIRKASSHALATANLRKEFELTEKQAEAILDISLRRLTALERNKFVDEGKSLR 546

Query: 1770 RXXXXXXXXXXXXXXXXXVIEAEANEIKNKFFTPRRSMLEDTDSGQLEDIDVIPNEEMLL 1949
                              +IE EA EIK+K+FTPRRS LEDTDSG LEDIDVIPNEEMLL
Sbjct: 547  TQISKLEELLSSEKQILQLIEEEALEIKDKYFTPRRSQLEDTDSGDLEDIDVIPNEEMLL 606

Query: 1950 ALSEKGYLKRMRPDTFNLQNRGTIGKSVGKLRVNDTMSDFIVCRTHDHVLYFSDKGTVYS 2129
            A+SEKGY+KRM+PDTFNLQNRGTIGKSVGKLRVND MSDF+VCR HD VLYFSDKGTVYS
Sbjct: 607  AISEKGYVKRMKPDTFNLQNRGTIGKSVGKLRVNDAMSDFLVCRAHDKVLYFSDKGTVYS 666

Query: 2130 ARAYKIPECSRAGAGTPLIQILSLSDGERVTSIIPVSEFEGDQYLMMLTMKGYIKKVSLN 2309
            + AYKIPECSR  AGTPLIQILSLSDGER+TSIIPVSEF GDQYL+MLT+ GYIKKVSLN
Sbjct: 667  SPAYKIPECSRTAAGTPLIQILSLSDGERITSIIPVSEFAGDQYLVMLTVNGYIKKVSLN 726

Query: 2310 YFSSIRSTGIIAIQLVPGDELKWVRRCTNDDFVAMASQNGMVILSPCENIRALGRNTRGG 2489
            YF+SIRSTGIIAIQLVPGDELKWV+ C+N+DFVAMAS NGMVIL+PC NIRAL RNTRG 
Sbjct: 727  YFASIRSTGIIAIQLVPGDELKWVKCCSNNDFVAMASLNGMVILTPCANIRALSRNTRGS 786

Query: 2490 VAMRLKQGDKMASMDIIPASFGQKLEKGSETQQTHGKGYTGPWLLFISESGFGKRVPLAS 2669
            VAMRLK GDK+ASMDIIP +  ++L+      Q + +   GPWLLF+SESG+GKRVP++ 
Sbjct: 787  VAMRLKDGDKVASMDIIPDALQKELDMTLAVHQRNKRSMNGPWLLFVSESGYGKRVPVSR 846

Query: 2670 FRMSPLNRVGLKGYKFSLEDRLAAVFVVGFSVGEDGESDEQVVLVSQSGTVNRIKVRDIS 2849
            FR SPLNRVGL GYKFS EDRLAAVFVVGFS GEDGESDEQVVLVSQSGTVNRIKVRDIS
Sbjct: 847  FRTSPLNRVGLIGYKFSSEDRLAAVFVVGFSFGEDGESDEQVVLVSQSGTVNRIKVRDIS 906

Query: 2850 IQSRFARGVILMRLEHAGKIQ 2912
            IQSR+ARGVILMRLEHAGKIQ
Sbjct: 907  IQSRYARGVILMRLEHAGKIQ 927



 Score =  489 bits (1259), Expect(2) = 0.0
 Identities = 260/329 (79%), Positives = 273/329 (82%), Gaps = 1/329 (0%)
 Frame = +2

Query: 227  MAFATGLRLLRSHPHTLSFSLTAPSRLLLARRVS-ELRFLSAVGPHQRRRLFXXXXXXXX 403
            MAF+TG+RLLR + H  +F+   PSR    R+ S ELRFLS+V P ++            
Sbjct: 18   MAFSTGIRLLRCYHHHFTFT-AIPSRFSGLRKASSELRFLSSVTPSRKHVRPVSARRKVT 76

Query: 404  XXXXXXXXXXXXXXRDVXXXXXXXXXXRIVVTELHKEATEAYMSYAMSVLLGRALPDVRD 583
                          RD           RIV TELHKEATEAYMSYAMSVLLGRALPDVRD
Sbjct: 77   EEEVGEEGNGSVVLRD-RDGNEGGGGERIVHTELHKEATEAYMSYAMSVLLGRALPDVRD 135

Query: 584  GLKPVHRRILYAMHELGLSSKKPYKKCARVVGEVLGKFHPHGDSAVYDSLVRMAQDFSLR 763
            GLKPVHRRILYAMHELGLSSKKPYKK ARVVGEVLGKFHPHGD+AVYDSLVRMAQDFSLR
Sbjct: 136  GLKPVHRRILYAMHELGLSSKKPYKKSARVVGEVLGKFHPHGDNAVYDSLVRMAQDFSLR 195

Query: 764  SPLIRGHGNFGSIDADPAAAMRYTECRLEALTEAMLLADLEQDTVDYVPNFDNSQKEPSL 943
            SPLIRGHGNFGSIDADP AAMRYTECRLEALTEAMLLADLEQ+TVD+VPNFDNSQKEPSL
Sbjct: 196  SPLIRGHGNFGSIDADPPAAMRYTECRLEALTEAMLLADLEQNTVDFVPNFDNSQKEPSL 255

Query: 944  LPARIPNLLLNGASGIAVGMATNIPPHNLGELVDALSVLIHNPEATLQELLEYMPGPDFP 1123
            LPARIPNLLLNGASGIAVGMATNIPPHNLGELVDALS LIHNPEATLQELLEYMPGPDFP
Sbjct: 256  LPARIPNLLLNGASGIAVGMATNIPPHNLGELVDALSALIHNPEATLQELLEYMPGPDFP 315

Query: 1124 TGGIIMGNLGILEAYRTGRGRVVIRGKTD 1210
            TGGIIMGN+GILEAYRTGRGRVVIRGKTD
Sbjct: 316  TGGIIMGNIGILEAYRTGRGRVVIRGKTD 344


>ref|XP_004230064.1| PREDICTED: DNA gyrase subunit A, chloroplastic/mitochondrial isoform
            X1 [Solanum lycopersicum]
          Length = 953

 Score =  878 bits (2269), Expect(2) = 0.0
 Identities = 449/561 (80%), Positives = 494/561 (88%)
 Frame = +3

Query: 1230 NKASLVEKIAELVENKILEGISDIRDESDRSGMRIVIEVKRGSDPSIVLNNLHHLTALQS 1409
            NKASLVEKIA+LVENK LEG+SDIRDESDRSGMR+VIE+KRGSDP+IVLNNL+ LT LQS
Sbjct: 367  NKASLVEKIADLVENKTLEGVSDIRDESDRSGMRVVIELKRGSDPAIVLNNLYRLTPLQS 426

Query: 1410 TFSCNMVGILNGQPKQMGLKELLQAFLDFRCSVVERRAKFKLSQAQDRYHIVEGIIIGLD 1589
            +FSCNMVGILNGQPK MGLKELLQAFLDFRCSVVERRAK+KLSQAQ+R HIVEGIIIGLD
Sbjct: 427  SFSCNMVGILNGQPKLMGLKELLQAFLDFRCSVVERRAKYKLSQAQERNHIVEGIIIGLD 486

Query: 1590 NLDRVIDVIRKASSHVLAATNLREEFSLTDKQAEAILDISLRKLTSLEKNKFIDEGNSLS 1769
            NLD VI+ IRKASSH LA  NLR+EF LT+KQAEAILDISLR+LT+LE+NKF+DEG SL 
Sbjct: 487  NLDEVINTIRKASSHALATANLRKEFELTEKQAEAILDISLRRLTALERNKFVDEGKSLR 546

Query: 1770 RXXXXXXXXXXXXXXXXXVIEAEANEIKNKFFTPRRSMLEDTDSGQLEDIDVIPNEEMLL 1949
                              +IE EA EIK+K+FTPRRS LEDTDSG LEDIDVIPNEEMLL
Sbjct: 547  TQISKLEELLSSEKQILQLIEEEALEIKDKYFTPRRSQLEDTDSGDLEDIDVIPNEEMLL 606

Query: 1950 ALSEKGYLKRMRPDTFNLQNRGTIGKSVGKLRVNDTMSDFIVCRTHDHVLYFSDKGTVYS 2129
            A+SEKGY+KRM+PDTFNLQNRGTIGKSVGKLRVND MSDF+VCR HD VLYFSDKGTVYS
Sbjct: 607  AISEKGYVKRMKPDTFNLQNRGTIGKSVGKLRVNDAMSDFLVCRAHDKVLYFSDKGTVYS 666

Query: 2130 ARAYKIPECSRAGAGTPLIQILSLSDGERVTSIIPVSEFEGDQYLMMLTMKGYIKKVSLN 2309
            + AYKIPECSR  AGTPLIQILSLSDGER+TSIIPVS+F GDQYL+MLT+ GYIKKVSLN
Sbjct: 667  SPAYKIPECSRTAAGTPLIQILSLSDGERITSIIPVSDFAGDQYLVMLTVNGYIKKVSLN 726

Query: 2310 YFSSIRSTGIIAIQLVPGDELKWVRRCTNDDFVAMASQNGMVILSPCENIRALGRNTRGG 2489
            YF+SIRSTGIIAIQLVPGDELKWV+ C+N+DFVAMAS NGMVIL+PC NIRALGRNTRG 
Sbjct: 727  YFASIRSTGIIAIQLVPGDELKWVKCCSNNDFVAMASLNGMVILTPCANIRALGRNTRGS 786

Query: 2490 VAMRLKQGDKMASMDIIPASFGQKLEKGSETQQTHGKGYTGPWLLFISESGFGKRVPLAS 2669
            VAMRLK GDK+ASMDIIP +  ++L+      Q + +   GPWLLF+SESG+GKRVP++ 
Sbjct: 787  VAMRLKDGDKVASMDIIPDALQKELDVTLAVHQRNKRSMNGPWLLFVSESGYGKRVPVSR 846

Query: 2670 FRMSPLNRVGLKGYKFSLEDRLAAVFVVGFSVGEDGESDEQVVLVSQSGTVNRIKVRDIS 2849
            FR SPLNRVGL GYKFS EDRLAAVFVVGFS GEDGESDEQVVLVSQSGTVNRIKVRDIS
Sbjct: 847  FRTSPLNRVGLIGYKFSSEDRLAAVFVVGFSFGEDGESDEQVVLVSQSGTVNRIKVRDIS 906

Query: 2850 IQSRFARGVILMRLEHAGKIQ 2912
            IQSR+ARGVILMRLEHAGKIQ
Sbjct: 907  IQSRYARGVILMRLEHAGKIQ 927



 Score =  489 bits (1260), Expect(2) = 0.0
 Identities = 260/329 (79%), Positives = 273/329 (82%), Gaps = 1/329 (0%)
 Frame = +2

Query: 227  MAFATGLRLLRSHPHTLSFSLTAPSRLLLARRVS-ELRFLSAVGPHQRRRLFXXXXXXXX 403
            MAF+TG+RLLR + H  +F+   PSR    R+ S ELRFLS+V P ++            
Sbjct: 18   MAFSTGIRLLRCYHHQFTFT-AIPSRFSGLRKASSELRFLSSVTPSRKHVRPVSARRKVT 76

Query: 404  XXXXXXXXXXXXXXRDVXXXXXXXXXXRIVVTELHKEATEAYMSYAMSVLLGRALPDVRD 583
                          RD           RIV TELHKEATEAYMSYAMSVLLGRALPDVRD
Sbjct: 77   EEEVGEEGNGSVVLRD-RDGNEGGGGERIVHTELHKEATEAYMSYAMSVLLGRALPDVRD 135

Query: 584  GLKPVHRRILYAMHELGLSSKKPYKKCARVVGEVLGKFHPHGDSAVYDSLVRMAQDFSLR 763
            GLKPVHRRILYAMHELGLSSKKPYKK ARVVGEVLGKFHPHGD+AVYDSLVRMAQDFSLR
Sbjct: 136  GLKPVHRRILYAMHELGLSSKKPYKKSARVVGEVLGKFHPHGDNAVYDSLVRMAQDFSLR 195

Query: 764  SPLIRGHGNFGSIDADPAAAMRYTECRLEALTEAMLLADLEQDTVDYVPNFDNSQKEPSL 943
            SPLIRGHGNFGSIDADP AAMRYTECRLEALTEAMLLADLEQ+TVD+VPNFDNSQKEPSL
Sbjct: 196  SPLIRGHGNFGSIDADPPAAMRYTECRLEALTEAMLLADLEQNTVDFVPNFDNSQKEPSL 255

Query: 944  LPARIPNLLLNGASGIAVGMATNIPPHNLGELVDALSVLIHNPEATLQELLEYMPGPDFP 1123
            LPARIPNLLLNGASGIAVGMATNIPPHNLGELVDALS LIHNPEATLQELLEYMPGPDFP
Sbjct: 256  LPARIPNLLLNGASGIAVGMATNIPPHNLGELVDALSALIHNPEATLQELLEYMPGPDFP 315

Query: 1124 TGGIIMGNLGILEAYRTGRGRVVIRGKTD 1210
            TGGIIMGN+GILEAYRTGRGRVVIRGKTD
Sbjct: 316  TGGIIMGNIGILEAYRTGRGRVVIRGKTD 344


>ref|XP_006347708.1| PREDICTED: DNA gyrase subunit A, chloroplastic/mitochondrial isoform
            X3 [Solanum tuberosum]
          Length = 957

 Score =  878 bits (2268), Expect(2) = 0.0
 Identities = 450/561 (80%), Positives = 493/561 (87%)
 Frame = +3

Query: 1230 NKASLVEKIAELVENKILEGISDIRDESDRSGMRIVIEVKRGSDPSIVLNNLHHLTALQS 1409
            NKASLVEKIA+LVENK LEG+SDIRDESDRSGMR+VIE+KRGSDP+IVLNNL+ LTALQS
Sbjct: 371  NKASLVEKIADLVENKTLEGVSDIRDESDRSGMRVVIELKRGSDPAIVLNNLYRLTALQS 430

Query: 1410 TFSCNMVGILNGQPKQMGLKELLQAFLDFRCSVVERRAKFKLSQAQDRYHIVEGIIIGLD 1589
            +FSCNMVGILNGQPK MGLKELLQAFLDFRCSVVERRAK+KLSQAQ+R HIVEGIIIGLD
Sbjct: 431  SFSCNMVGILNGQPKLMGLKELLQAFLDFRCSVVERRAKYKLSQAQERSHIVEGIIIGLD 490

Query: 1590 NLDRVIDVIRKASSHVLAATNLREEFSLTDKQAEAILDISLRKLTSLEKNKFIDEGNSLS 1769
            NLD VI  IRKASSH LA  NLR+EF LT+KQAEAILDISLR+LT+LE+NKF+DEG SL 
Sbjct: 491  NLDEVIKTIRKASSHALATANLRKEFELTEKQAEAILDISLRRLTALERNKFVDEGKSLR 550

Query: 1770 RXXXXXXXXXXXXXXXXXVIEAEANEIKNKFFTPRRSMLEDTDSGQLEDIDVIPNEEMLL 1949
                              +IE EA EIK+K+FTPRRS LEDTDSG LEDIDVIPNEEMLL
Sbjct: 551  AQISKLEELLSSKKQILQLIEEEALEIKDKYFTPRRSQLEDTDSGNLEDIDVIPNEEMLL 610

Query: 1950 ALSEKGYLKRMRPDTFNLQNRGTIGKSVGKLRVNDTMSDFIVCRTHDHVLYFSDKGTVYS 2129
            A+SEKGY+KRM+PDTFNLQNRGTIGKSVGKLRVND MSDF+VCR HD VLYFSDKGTVYS
Sbjct: 611  AISEKGYVKRMKPDTFNLQNRGTIGKSVGKLRVNDAMSDFLVCRAHDKVLYFSDKGTVYS 670

Query: 2130 ARAYKIPECSRAGAGTPLIQILSLSDGERVTSIIPVSEFEGDQYLMMLTMKGYIKKVSLN 2309
              AYKIPECSR  AGTPLIQILSLSDGER+TSIIPVSEF GDQYL+MLT+ GYIKKVSLN
Sbjct: 671  YPAYKIPECSRTAAGTPLIQILSLSDGERITSIIPVSEFVGDQYLVMLTVNGYIKKVSLN 730

Query: 2310 YFSSIRSTGIIAIQLVPGDELKWVRRCTNDDFVAMASQNGMVILSPCENIRALGRNTRGG 2489
            YF+SIRSTGIIAIQLVPGDELKWV+ C+N+DFVAMAS NGMVIL+PC NIRALGRNTRG 
Sbjct: 731  YFASIRSTGIIAIQLVPGDELKWVKCCSNNDFVAMASLNGMVILTPCANIRALGRNTRGS 790

Query: 2490 VAMRLKQGDKMASMDIIPASFGQKLEKGSETQQTHGKGYTGPWLLFISESGFGKRVPLAS 2669
            VAMRLK GDK+ASMDIIP +  ++L+      Q + +   GPWLLF+SESG+GKRVP++ 
Sbjct: 791  VAMRLKDGDKVASMDIIPDALQKELDMTLAVHQRNRRSMNGPWLLFVSESGYGKRVPVSR 850

Query: 2670 FRMSPLNRVGLKGYKFSLEDRLAAVFVVGFSVGEDGESDEQVVLVSQSGTVNRIKVRDIS 2849
            FR SPLNRVGL GYKFS EDRLAAVFVVGFS GEDGESDEQVVLVSQSGTVNRIKV+DIS
Sbjct: 851  FRTSPLNRVGLIGYKFSSEDRLAAVFVVGFSFGEDGESDEQVVLVSQSGTVNRIKVQDIS 910

Query: 2850 IQSRFARGVILMRLEHAGKIQ 2912
            IQSR+ARGVILMRLEHAGKIQ
Sbjct: 911  IQSRYARGVILMRLEHAGKIQ 931



 Score =  496 bits (1276), Expect(2) = 0.0
 Identities = 266/353 (75%), Positives = 282/353 (79%), Gaps = 4/353 (1%)
 Frame = +2

Query: 164  SIQPGAHFGPPNPIPEPAKPHMAFATGLRLLRSHPHTLSFSLTAPSRLLLARRVS-ELRF 340
            ++ P   F   NP        MAF+TG+RLLR + H  +F+   PSR    RR S ELRF
Sbjct: 5    TLNPQTSFAQSNP--------MAFSTGIRLLRCYHHHFTFT-AIPSRFSGLRRASSELRF 55

Query: 341  LSAVGPHQRRRLFXXXXXXXXXXXXXXXXXXXXXXRDVXXXXXXXXXX---RIVVTELHK 511
            LS+V P +++                         RD              RIV+TELHK
Sbjct: 56   LSSVTPPRKQVRPVSARRKVTEEEVGDEGNGSVILRDRDGNEGGGGGGGGERIVLTELHK 115

Query: 512  EATEAYMSYAMSVLLGRALPDVRDGLKPVHRRILYAMHELGLSSKKPYKKCARVVGEVLG 691
            EATEAYMSYAMSVLLGRALPDVRDGLKPVHRRILYAMHELGLSSKKPYKKCARVVGEVLG
Sbjct: 116  EATEAYMSYAMSVLLGRALPDVRDGLKPVHRRILYAMHELGLSSKKPYKKCARVVGEVLG 175

Query: 692  KFHPHGDSAVYDSLVRMAQDFSLRSPLIRGHGNFGSIDADPAAAMRYTECRLEALTEAML 871
            KFHPHGD+AVYDSLVRMAQDFSLRSPLIRGHGNFGSIDADP AAMRYTECRLEALTEAML
Sbjct: 176  KFHPHGDNAVYDSLVRMAQDFSLRSPLIRGHGNFGSIDADPPAAMRYTECRLEALTEAML 235

Query: 872  LADLEQDTVDYVPNFDNSQKEPSLLPARIPNLLLNGASGIAVGMATNIPPHNLGELVDAL 1051
            LADLEQ+TVD+VPNFDNSQKEPSLLPARIPNLLLNGASGIAVGMATNIPPHNLGELVDAL
Sbjct: 236  LADLEQNTVDFVPNFDNSQKEPSLLPARIPNLLLNGASGIAVGMATNIPPHNLGELVDAL 295

Query: 1052 SVLIHNPEATLQELLEYMPGPDFPTGGIIMGNLGILEAYRTGRGRVVIRGKTD 1210
            S LIHNPEATLQELLEYMPGPDFPTGGIIMGN+GILEAYRTGRGRVVIRGKTD
Sbjct: 296  SALIHNPEATLQELLEYMPGPDFPTGGIIMGNIGILEAYRTGRGRVVIRGKTD 348


>emb|CDP16534.1| unnamed protein product [Coffea canephora]
          Length = 937

 Score =  865 bits (2236), Expect(2) = 0.0
 Identities = 444/561 (79%), Positives = 494/561 (88%)
 Frame = +3

Query: 1230 NKASLVEKIAELVENKILEGISDIRDESDRSGMRIVIEVKRGSDPSIVLNNLHHLTALQS 1409
            NKASL+E IA+LVENK LEGISDIRDESDRSGMRIVIE+KRGS PSIVLNNL+ +TALQS
Sbjct: 357  NKASLIENIAQLVENKKLEGISDIRDESDRSGMRIVIELKRGSAPSIVLNNLYRMTALQS 416

Query: 1410 TFSCNMVGILNGQPKQMGLKELLQAFLDFRCSVVERRAKFKLSQAQDRYHIVEGIIIGLD 1589
            +F+CNMVGILNGQPK MGLKELLQAFLDFRCSV+ERRA+FKLS AQDR HIVEGII+GLD
Sbjct: 417  SFNCNMVGILNGQPKVMGLKELLQAFLDFRCSVIERRARFKLSHAQDRNHIVEGIIVGLD 476

Query: 1590 NLDRVIDVIRKASSHVLAATNLREEFSLTDKQAEAILDISLRKLTSLEKNKFIDEGNSLS 1769
            NLD VID+IRKASSH  A   L +EF+L++KQAEAILDISLR+LT LE+NKF+DE  SL+
Sbjct: 477  NLDGVIDIIRKASSHSGATAQLMKEFNLSEKQAEAILDISLRRLTLLERNKFVDERKSLT 536

Query: 1770 RXXXXXXXXXXXXXXXXXVIEAEANEIKNKFFTPRRSMLEDTDSGQLEDIDVIPNEEMLL 1949
                              +IE EA EIKNKF TPRRSMLED++SGQ+EDIDVIPNEEMLL
Sbjct: 537  EQISKLLELLSSKKRILQLIEEEAMEIKNKFSTPRRSMLEDSESGQVEDIDVIPNEEMLL 596

Query: 1950 ALSEKGYLKRMRPDTFNLQNRGTIGKSVGKLRVNDTMSDFIVCRTHDHVLYFSDKGTVYS 2129
            A+SEKGY+KRM+PDTFNLQ RGTIGKSVGKLR NDT+SDF+VCR HDHVLYFSDKG VYS
Sbjct: 597  AISEKGYVKRMKPDTFNLQKRGTIGKSVGKLRDNDTLSDFLVCRAHDHVLYFSDKGIVYS 656

Query: 2130 ARAYKIPECSRAGAGTPLIQILSLSDGERVTSIIPVSEFEGDQYLMMLTMKGYIKKVSLN 2309
            ARAYKIPEC+RA AG  L+QILSLSDGER+TSIIPVSEF GDQ+L+MLT+ GY+KKVSLN
Sbjct: 657  ARAYKIPECTRAAAGVTLVQILSLSDGERITSIIPVSEFSGDQFLLMLTVNGYVKKVSLN 716

Query: 2310 YFSSIRSTGIIAIQLVPGDELKWVRRCTNDDFVAMASQNGMVILSPCENIRALGRNTRGG 2489
            YFSSIRSTGIIAIQLVPGD+LKWVR C N+DFVAMASQNGMVILS CE IRALGRNTRG 
Sbjct: 717  YFSSIRSTGIIAIQLVPGDKLKWVRHCANEDFVAMASQNGMVILSSCEKIRALGRNTRGS 776

Query: 2490 VAMRLKQGDKMASMDIIPASFGQKLEKGSETQQTHGKGYTGPWLLFISESGFGKRVPLAS 2669
            VAMRLK  DK+ASMDIIPA+  ++L+  S   + H KG TGPWLLF+SESGFGKRVPL+S
Sbjct: 777  VAMRLKGEDKVASMDIIPAALSKELDNLS--HRRHCKGLTGPWLLFVSESGFGKRVPLSS 834

Query: 2670 FRMSPLNRVGLKGYKFSLEDRLAAVFVVGFSVGEDGESDEQVVLVSQSGTVNRIKVRDIS 2849
            FRMSPLNR GL GYKF+ ED+LAAVFVVGFS+G+DGESDEQVVLVSQSGTVNRIKVRDIS
Sbjct: 835  FRMSPLNRTGLIGYKFASEDQLAAVFVVGFSLGDDGESDEQVVLVSQSGTVNRIKVRDIS 894

Query: 2850 IQSRFARGVILMRLEHAGKIQ 2912
            IQSRFARGVILMRLEHAGKI+
Sbjct: 895  IQSRFARGVILMRLEHAGKIK 915



 Score =  469 bits (1207), Expect(2) = 0.0
 Identities = 250/335 (74%), Positives = 269/335 (80%), Gaps = 7/335 (2%)
 Frame = +2

Query: 227  MAF---ATGLRLLRSHPHTLSFSLTAPSRLLLARRVSELRFLSAVGPHQRRRLFXXXXXX 397
            MAF    TGLRLLR +   L   +TA    L   RVSELRFLS+  P ++  +       
Sbjct: 1    MAFNITTTGLRLLRCYSQHLR-PVTAQFSGLRKVRVSELRFLSSSVPIEKLPVVKAKRRE 59

Query: 398  XXXXXXXXXXXXXXXX----RDVXXXXXXXXXXRIVVTELHKEATEAYMSYAMSVLLGRA 565
                                RD           RI+V+ELHKEATEAYM+YAMSVLLGRA
Sbjct: 60   AEDAVLDDGGGDNGSVVLAARDKIGGGSGGGEGRIIVSELHKEATEAYMAYAMSVLLGRA 119

Query: 566  LPDVRDGLKPVHRRILYAMHELGLSSKKPYKKCARVVGEVLGKFHPHGDSAVYDSLVRMA 745
            LPDVRDGLKPVHRRIL+AMHELGLSS+KP+KKCARVVGEVLGK+HPHGD+AVYDSLVRMA
Sbjct: 120  LPDVRDGLKPVHRRILFAMHELGLSSRKPHKKCARVVGEVLGKYHPHGDTAVYDSLVRMA 179

Query: 746  QDFSLRSPLIRGHGNFGSIDADPAAAMRYTECRLEALTEAMLLADLEQDTVDYVPNFDNS 925
            QDFSLRSPLIRGHGNFGSIDADP AAMRYTECRLEAL EAMLLADL+QDTVD+VPNFDNS
Sbjct: 180  QDFSLRSPLIRGHGNFGSIDADPPAAMRYTECRLEALAEAMLLADLDQDTVDFVPNFDNS 239

Query: 926  QKEPSLLPARIPNLLLNGASGIAVGMATNIPPHNLGELVDALSVLIHNPEATLQELLEYM 1105
            QKEPSLLPARIPNLLLNGASGIAVGMATNIPPHNL ELVDALSVLIHNPEATLQELLEYM
Sbjct: 240  QKEPSLLPARIPNLLLNGASGIAVGMATNIPPHNLAELVDALSVLIHNPEATLQELLEYM 299

Query: 1106 PGPDFPTGGIIMGNLGILEAYRTGRGRVVIRGKTD 1210
            PGPDFPTGG IMGN+GIL AYRTGRGRV++RGKTD
Sbjct: 300  PGPDFPTGGTIMGNIGILAAYRTGRGRVIVRGKTD 334


>ref|XP_015876288.1| PREDICTED: DNA gyrase subunit A, chloroplastic/mitochondrial
            [Ziziphus jujuba]
          Length = 950

 Score =  857 bits (2214), Expect(2) = 0.0
 Identities = 438/561 (78%), Positives = 489/561 (87%)
 Frame = +3

Query: 1230 NKASLVEKIAELVENKILEGISDIRDESDRSGMRIVIEVKRGSDPSIVLNNLHHLTALQS 1409
            NK++LVEKIAELVENK L+GISDIRDESDRSGMRIVIE+KRGS+PSIVLNNL  LT+LQS
Sbjct: 368  NKSALVEKIAELVENKSLDGISDIRDESDRSGMRIVIELKRGSEPSIVLNNLFRLTSLQS 427

Query: 1410 TFSCNMVGILNGQPKQMGLKELLQAFLDFRCSVVERRAKFKLSQAQDRYHIVEGIIIGLD 1589
            +FSCNMVGILNGQPK MGLKE+LQAFLDFRCS+VERRA+FKLSQAQ R HIVEGII+GLD
Sbjct: 428  SFSCNMVGILNGQPKLMGLKEMLQAFLDFRCSIVERRARFKLSQAQARRHIVEGIIVGLD 487

Query: 1590 NLDRVIDVIRKASSHVLAATNLREEFSLTDKQAEAILDISLRKLTSLEKNKFIDEGNSLS 1769
            N+D VI +IR++SS+ +A   LR EF+L++KQAEAILDI+LR+LT LE+ KF+DEG SL 
Sbjct: 488  NIDGVIHLIRESSSNAVALAGLRNEFNLSEKQAEAILDINLRRLTLLERKKFVDEGESLR 547

Query: 1770 RXXXXXXXXXXXXXXXXXVIEAEANEIKNKFFTPRRSMLEDTDSGQLEDIDVIPNEEMLL 1949
                              VI+ EA E+KNKF +PRRSMLEDTD GQLEDIDVIPNEEMLL
Sbjct: 548  EQISKLEELLSSKKHIFQVIKEEAIELKNKFSSPRRSMLEDTDDGQLEDIDVIPNEEMLL 607

Query: 1950 ALSEKGYLKRMRPDTFNLQNRGTIGKSVGKLRVNDTMSDFIVCRTHDHVLYFSDKGTVYS 2129
            A SEKGY+KRM+P TFNLQNRGTIGKSVGKLRVND MSDFIVCR HDHVLYFSDKGTVYS
Sbjct: 608  AFSEKGYVKRMKPSTFNLQNRGTIGKSVGKLRVNDAMSDFIVCRAHDHVLYFSDKGTVYS 667

Query: 2130 ARAYKIPECSRAGAGTPLIQILSLSDGERVTSIIPVSEFEGDQYLMMLTMKGYIKKVSLN 2309
            ARAYKIPEC+R  AGTPL+QILSLSD ER+TS++PVSEF GDQ+L+MLT  GYIKKVSL+
Sbjct: 668  ARAYKIPECTRTAAGTPLVQILSLSDAERITSVVPVSEFAGDQFLVMLTANGYIKKVSLS 727

Query: 2310 YFSSIRSTGIIAIQLVPGDELKWVRRCTNDDFVAMASQNGMVILSPCENIRALGRNTRGG 2489
             FSSIRSTGIIAIQLVPGDELKWVRRCTNDD VAMASQNGMV LS CENIRAL RNTRG 
Sbjct: 728  SFSSIRSTGIIAIQLVPGDELKWVRRCTNDDLVAMASQNGMVTLSACENIRALSRNTRGT 787

Query: 2490 VAMRLKQGDKMASMDIIPASFGQKLEKGSETQQTHGKGYTGPWLLFISESGFGKRVPLAS 2669
             AMRLK GD+MAS+DIIPA+  + LE+ SE+  ++ KG+ GPWLLFISESG+GKRVP++S
Sbjct: 788  AAMRLKGGDRMASIDIIPAAIRKDLERLSESPHSNAKGHNGPWLLFISESGYGKRVPVSS 847

Query: 2670 FRMSPLNRVGLKGYKFSLEDRLAAVFVVGFSVGEDGESDEQVVLVSQSGTVNRIKVRDIS 2849
            FR SPLNRVGL GYKFS EDRL AVFVVGFS  ED ESDEQVVLVSQSGTVNRIKVRDIS
Sbjct: 848  FRSSPLNRVGLIGYKFSAEDRLVAVFVVGFSQSEDDESDEQVVLVSQSGTVNRIKVRDIS 907

Query: 2850 IQSRFARGVILMRLEHAGKIQ 2912
            IQSR+ARGVILMRL+HAGKIQ
Sbjct: 908  IQSRYARGVILMRLDHAGKIQ 928



 Score =  447 bits (1151), Expect(2) = 0.0
 Identities = 217/242 (89%), Positives = 235/242 (97%)
 Frame = +2

Query: 485  RIVVTELHKEATEAYMSYAMSVLLGRALPDVRDGLKPVHRRILYAMHELGLSSKKPYKKC 664
            R+V TELHKEAT+AY++YAMSVLLGRALPDVRDGLKPVHRRIL+AMHELGLSS+KP+KKC
Sbjct: 104  RVVPTELHKEATDAYIAYAMSVLLGRALPDVRDGLKPVHRRILFAMHELGLSSRKPFKKC 163

Query: 665  ARVVGEVLGKFHPHGDSAVYDSLVRMAQDFSLRSPLIRGHGNFGSIDADPAAAMRYTECR 844
            ARVVGEVLGKFHPHGD+AVYDSLVRMAQDFSLR PLIRGHGNFGSIDADP AAMRYTECR
Sbjct: 164  ARVVGEVLGKFHPHGDNAVYDSLVRMAQDFSLRCPLIRGHGNFGSIDADPPAAMRYTECR 223

Query: 845  LEALTEAMLLADLEQDTVDYVPNFDNSQKEPSLLPARIPNLLLNGASGIAVGMATNIPPH 1024
            L+AL+EAMLLADLE DTVD+VPNFDNSQKEPSLLPAR+P LLLNG+SGIAVGMATNIPPH
Sbjct: 224  LDALSEAMLLADLELDTVDFVPNFDNSQKEPSLLPARLPTLLLNGSSGIAVGMATNIPPH 283

Query: 1025 NLGELVDALSVLIHNPEATLQELLEYMPGPDFPTGGIIMGNLGILEAYRTGRGRVVIRGK 1204
            NLGELVD L VLI+NPEATLQELLEYMPGPDFPTGG+IMGN+GILEAYRTGRGRVV+RGK
Sbjct: 284  NLGELVDVLCVLINNPEATLQELLEYMPGPDFPTGGLIMGNIGILEAYRTGRGRVVVRGK 343

Query: 1205 TD 1210
            T+
Sbjct: 344  TE 345


>ref|XP_002271674.2| PREDICTED: DNA gyrase subunit A, chloroplastic/mitochondrial isoform
            X1 [Vitis vinifera]
          Length = 925

 Score =  855 bits (2209), Expect(2) = 0.0
 Identities = 437/561 (77%), Positives = 489/561 (87%)
 Frame = +3

Query: 1230 NKASLVEKIAELVENKILEGISDIRDESDRSGMRIVIEVKRGSDPSIVLNNLHHLTALQS 1409
            NK+SLVEKIAELVENK L+GISDIRDESDRSGMRIVIE+KRGSDPSIVLN L+ LTALQS
Sbjct: 343  NKSSLVEKIAELVENKSLDGISDIRDESDRSGMRIVIELKRGSDPSIVLNKLYRLTALQS 402

Query: 1410 TFSCNMVGILNGQPKQMGLKELLQAFLDFRCSVVERRAKFKLSQAQDRYHIVEGIIIGLD 1589
            +FSCNM+GIL+GQPK MGLKELLQAFLDFRCSVVERRA+FKLSQAQ+R HIVEGI++GLD
Sbjct: 403  SFSCNMIGILDGQPKLMGLKELLQAFLDFRCSVVERRARFKLSQAQERRHIVEGIVVGLD 462

Query: 1590 NLDRVIDVIRKASSHVLAATNLREEFSLTDKQAEAILDISLRKLTSLEKNKFIDEGNSLS 1769
            NLD VI VI++A S+ +A+T LR EF L+++QAEAILDISLR++T LE+ KF+ E  SL 
Sbjct: 463  NLDAVIRVIKEAPSNAMASTGLRNEFGLSERQAEAILDISLRRITRLEREKFVTESKSLM 522

Query: 1770 RXXXXXXXXXXXXXXXXXVIEAEANEIKNKFFTPRRSMLEDTDSGQLEDIDVIPNEEMLL 1949
                              +IE EA E+KN+F TPRRSMLEDTDSGQLED+DVIPNEEMLL
Sbjct: 523  EQISKLQELLSSRKQILQLIEQEAIELKNRFSTPRRSMLEDTDSGQLEDVDVIPNEEMLL 582

Query: 1950 ALSEKGYLKRMRPDTFNLQNRGTIGKSVGKLRVNDTMSDFIVCRTHDHVLYFSDKGTVYS 2129
            A+SEKGY+KRM+P+TFNLQNRGTIGKSVGKLRVND MSDFIVC  HD+VLYFSD+G V+S
Sbjct: 583  AVSEKGYVKRMKPNTFNLQNRGTIGKSVGKLRVNDAMSDFIVCHAHDYVLYFSDRGIVHS 642

Query: 2130 ARAYKIPECSRAGAGTPLIQILSLSDGERVTSIIPVSEFEGDQYLMMLTMKGYIKKVSLN 2309
            ARAYKIPEC+R  AGTPL+QIL LSDGER+TSIIPVSEF  DQ+L+MLTM GYIKKVSLN
Sbjct: 643  ARAYKIPECTRTAAGTPLVQILCLSDGERITSIIPVSEFAEDQFLLMLTMNGYIKKVSLN 702

Query: 2310 YFSSIRSTGIIAIQLVPGDELKWVRRCTNDDFVAMASQNGMVILSPCENIRALGRNTRGG 2489
            +FSSIRSTGIIAIQLVPGDELKWVR CTNDD VAMASQNGMVILS CE IRALGRNTRG 
Sbjct: 703  FFSSIRSTGIIAIQLVPGDELKWVRCCTNDDLVAMASQNGMVILSSCEIIRALGRNTRGS 762

Query: 2490 VAMRLKQGDKMASMDIIPASFGQKLEKGSETQQTHGKGYTGPWLLFISESGFGKRVPLAS 2669
            +AMRLKQGDKMASMDIIPA+  + LEK  E +Q+  +   GPWLLF+SESG GKRVPL+ 
Sbjct: 763  IAMRLKQGDKMASMDIIPAAIRKDLEKALEDRQSRARNLNGPWLLFVSESGLGKRVPLSR 822

Query: 2670 FRMSPLNRVGLKGYKFSLEDRLAAVFVVGFSVGEDGESDEQVVLVSQSGTVNRIKVRDIS 2849
            FR+SPLNRVGL GYKFS ED LAAVFVVGFS+ EDGESDEQVVLVSQSGT+NRIKV DIS
Sbjct: 823  FRLSPLNRVGLIGYKFSAEDHLAAVFVVGFSLTEDGESDEQVVLVSQSGTINRIKVWDIS 882

Query: 2850 IQSRFARGVILMRLEHAGKIQ 2912
            IQSRFARGVILMRLE+AGKIQ
Sbjct: 883  IQSRFARGVILMRLEYAGKIQ 903



 Score =  456 bits (1173), Expect(2) = 0.0
 Identities = 238/330 (72%), Positives = 260/330 (78%)
 Frame = +2

Query: 221  PHMAFATGLRLLRSHPHTLSFSLTAPSRLLLARRVSELRFLSAVGPHQRRRLFXXXXXXX 400
            P MAF+    LLR       FSL       L  R+S LRFLS   P ++  L        
Sbjct: 13   PPMAFSAASSLLRHQ-----FSLP------LHHRLSYLRFLSVTAPPRKPHLVRARRRDD 61

Query: 401  XXXXXXXXXXXXXXXRDVXXXXXXXXXXRIVVTELHKEATEAYMSYAMSVLLGRALPDVR 580
                             +          RIV TELHKEATEAYM+YAMSVLLGRALPDVR
Sbjct: 62   EEGNG-----------SLVLKEKDGRDGRIVPTELHKEATEAYMAYAMSVLLGRALPDVR 110

Query: 581  DGLKPVHRRILYAMHELGLSSKKPYKKCARVVGEVLGKFHPHGDSAVYDSLVRMAQDFSL 760
            DGLKPVHRRIL+AMHELGLSS+KPYKKCARVVGEVLGKFHPHGD+AVYDSLVRMAQDFSL
Sbjct: 111  DGLKPVHRRILFAMHELGLSSRKPYKKCARVVGEVLGKFHPHGDTAVYDSLVRMAQDFSL 170

Query: 761  RSPLIRGHGNFGSIDADPAAAMRYTECRLEALTEAMLLADLEQDTVDYVPNFDNSQKEPS 940
            R PLI+GHGNFGS+DADP AAMRYTECRLEALTEAMLLADLEQDTVD++PNFDNSQKEPS
Sbjct: 171  RCPLIQGHGNFGSVDADPPAAMRYTECRLEALTEAMLLADLEQDTVDFLPNFDNSQKEPS 230

Query: 941  LLPARIPNLLLNGASGIAVGMATNIPPHNLGELVDALSVLIHNPEATLQELLEYMPGPDF 1120
            LLPAR+P LLLNG+SGIAVGMATNIPPHN+GELVD L VLI NPEATLQELLEYMPGPDF
Sbjct: 231  LLPARLPTLLLNGSSGIAVGMATNIPPHNIGELVDVLCVLIRNPEATLQELLEYMPGPDF 290

Query: 1121 PTGGIIMGNLGILEAYRTGRGRVVIRGKTD 1210
            PTGG+IMGN+GILEAYRTGRGR+++RGKT+
Sbjct: 291  PTGGLIMGNIGILEAYRTGRGRIIVRGKTE 320


>ref|XP_008231902.1| PREDICTED: DNA gyrase subunit A, chloroplastic/mitochondrial [Prunus
            mume]
          Length = 946

 Score =  853 bits (2204), Expect(2) = 0.0
 Identities = 434/561 (77%), Positives = 490/561 (87%)
 Frame = +3

Query: 1230 NKASLVEKIAELVENKILEGISDIRDESDRSGMRIVIEVKRGSDPSIVLNNLHHLTALQS 1409
            NK++LVEKIAELVENK LEGISDIRDESDRSGMR+VIE+KRGSDPSIVLNNL+ LT+LQ 
Sbjct: 364  NKSALVEKIAELVENKSLEGISDIRDESDRSGMRVVIELKRGSDPSIVLNNLYRLTSLQC 423

Query: 1410 TFSCNMVGILNGQPKQMGLKELLQAFLDFRCSVVERRAKFKLSQAQDRYHIVEGIIIGLD 1589
            +FSCNMVGI NGQPKQMGLKELLQAFLDFRCSV+ERRAKFKLSQAQ+R HIV GI++GLD
Sbjct: 424  SFSCNMVGIHNGQPKQMGLKELLQAFLDFRCSVIERRAKFKLSQAQERRHIVAGIVVGLD 483

Query: 1590 NLDRVIDVIRKASSHVLAATNLREEFSLTDKQAEAILDISLRKLTSLEKNKFIDEGNSLS 1769
            NLD VI ++R++SS+ +A++ LR EF+L++KQAEAILDISLR++T LE+ KFI+E  SL 
Sbjct: 484  NLDAVIHILRESSSNAIASSGLRSEFNLSEKQAEAILDISLRRITMLERKKFINESESLK 543

Query: 1770 RXXXXXXXXXXXXXXXXXVIEAEANEIKNKFFTPRRSMLEDTDSGQLEDIDVIPNEEMLL 1949
                              +IE EANE+K+KF +PRRSMLED+DSG L+DIDVIPNEEMLL
Sbjct: 544  EQISKLEELLSSKKYILQLIEQEANELKSKFSSPRRSMLEDSDSGHLDDIDVIPNEEMLL 603

Query: 1950 ALSEKGYLKRMRPDTFNLQNRGTIGKSVGKLRVNDTMSDFIVCRTHDHVLYFSDKGTVYS 2129
            A SEKGY+KRMRP+TFNLQNRGTIGKSVGKLRVND MSDFIVCR HDHVLYFSDKGTVYS
Sbjct: 604  AFSEKGYVKRMRPNTFNLQNRGTIGKSVGKLRVNDAMSDFIVCRAHDHVLYFSDKGTVYS 663

Query: 2130 ARAYKIPECSRAGAGTPLIQILSLSDGERVTSIIPVSEFEGDQYLMMLTMKGYIKKVSLN 2309
            ARAYKIPEC+R  AGTPL+QILSLSDGER+TS+IPVSEF  DQ+L+MLT+ GYIKKVSL+
Sbjct: 664  ARAYKIPECTRTAAGTPLVQILSLSDGERITSVIPVSEFAADQFLLMLTVNGYIKKVSLS 723

Query: 2310 YFSSIRSTGIIAIQLVPGDELKWVRRCTNDDFVAMASQNGMVILSPCENIRALGRNTRGG 2489
            YFSSIRSTGIIAIQLVPGDELKWVR CTNDD VAMASQNGMVILS  + IRALGRNTRG 
Sbjct: 724  YFSSIRSTGIIAIQLVPGDELKWVRCCTNDDLVAMASQNGMVILSSSDIIRALGRNTRGA 783

Query: 2490 VAMRLKQGDKMASMDIIPASFGQKLEKGSETQQTHGKGYTGPWLLFISESGFGKRVPLAS 2669
            VAMRLK+GDKMAS+DIIPA+  + LE+  E      +   GPWLLF+SESG+GKRVPL+ 
Sbjct: 784  VAMRLKEGDKMASVDIIPAAMRKDLERVLEAPHIAARSVKGPWLLFVSESGYGKRVPLSR 843

Query: 2670 FRMSPLNRVGLKGYKFSLEDRLAAVFVVGFSVGEDGESDEQVVLVSQSGTVNRIKVRDIS 2849
            F  S LNRVGL GYKF+LEDRLAAVFVVGFS+ EDGESDEQVVLVSQSGTVNRIKVRDIS
Sbjct: 844  FHSSKLNRVGLIGYKFALEDRLAAVFVVGFSLAEDGESDEQVVLVSQSGTVNRIKVRDIS 903

Query: 2850 IQSRFARGVILMRLEHAGKIQ 2912
            IQSR+ARGVILMRL+HAGKIQ
Sbjct: 904  IQSRYARGVILMRLDHAGKIQ 924



 Score =  460 bits (1183), Expect(2) = 0.0
 Identities = 246/342 (71%), Positives = 265/342 (77%), Gaps = 5/342 (1%)
 Frame = +2

Query: 200  PIPEPAKPHMAFATGLRLLRSHPHTLSFSLTAP---SRLL-LARRVSELRFLSAVGPHQR 367
            P   P  P MA A+ LRL  S    L + L AP   +R   L   +SELRFLSA      
Sbjct: 3    PSVSPQTPTMALASSLRLSSS---ILRYRLAAPLYPTRFSSLRHNLSELRFLSASSSRPG 59

Query: 368  RRLFXXXXXXXXXXXXXXXXXXXXXXRDVXXXXXXXXXX-RIVVTELHKEATEAYMSYAM 544
              +                         V           RIV  ELHKEATEAYM+YAM
Sbjct: 60   THVRPTKARLQDDPQKEDPGEGQNGNGSVLVKDTSENSEERIVRVELHKEATEAYMAYAM 119

Query: 545  SVLLGRALPDVRDGLKPVHRRILYAMHELGLSSKKPYKKCARVVGEVLGKFHPHGDSAVY 724
            SVLLGRALPDVRDGLKPVHRRILYAMHELGL+S+KP+KKCARVVGEVLGKFHPHGD+AVY
Sbjct: 120  SVLLGRALPDVRDGLKPVHRRILYAMHELGLASRKPFKKCARVVGEVLGKFHPHGDTAVY 179

Query: 725  DSLVRMAQDFSLRSPLIRGHGNFGSIDADPAAAMRYTECRLEALTEAMLLADLEQDTVDY 904
            DSLVRMAQDFSLR PLI+GHGNFGSIDADPAAAMRYTECRLE LTEAMLLADL+QDTVD+
Sbjct: 180  DSLVRMAQDFSLRFPLIQGHGNFGSIDADPAAAMRYTECRLEPLTEAMLLADLDQDTVDF 239

Query: 905  VPNFDNSQKEPSLLPARIPNLLLNGASGIAVGMATNIPPHNLGELVDALSVLIHNPEATL 1084
             PNFDNSQKEPS+LPAR+P LLLNGASGIAVGMATNIPPHNLGELVD LSVLIHNPEATL
Sbjct: 240  TPNFDNSQKEPSVLPARLPTLLLNGASGIAVGMATNIPPHNLGELVDVLSVLIHNPEATL 299

Query: 1085 QELLEYMPGPDFPTGGIIMGNLGILEAYRTGRGRVVIRGKTD 1210
            QELLEYMPGPDFPTGG+IMGNLGILEAYRTG+GR+V+RGKTD
Sbjct: 300  QELLEYMPGPDFPTGGLIMGNLGILEAYRTGKGRIVVRGKTD 341


>ref|XP_012458415.1| PREDICTED: DNA gyrase subunit A, chloroplastic/mitochondrial isoform
            X1 [Gossypium raimondii]
          Length = 961

 Score =  850 bits (2195), Expect(2) = 0.0
 Identities = 431/561 (76%), Positives = 492/561 (87%)
 Frame = +3

Query: 1230 NKASLVEKIAELVENKILEGISDIRDESDRSGMRIVIEVKRGSDPSIVLNNLHHLTALQS 1409
            NK+SLVEKIAELVENK LEGI+DIRDESDRSGMR+VIE+KRG+DPSIVLNNL+ LTALQS
Sbjct: 363  NKSSLVEKIAELVENKTLEGINDIRDESDRSGMRVVIELKRGADPSIVLNNLYRLTALQS 422

Query: 1410 TFSCNMVGILNGQPKQMGLKELLQAFLDFRCSVVERRAKFKLSQAQDRYHIVEGIIIGLD 1589
            +F+CNMVGIL+GQPKQMGLKELLQAFL+FRCSVVERRA++KLSQAQDR HIVEGI++GLD
Sbjct: 423  SFNCNMVGILDGQPKQMGLKELLQAFLEFRCSVVERRARYKLSQAQDRRHIVEGIVVGLD 482

Query: 1590 NLDRVIDVIRKASSHVLAATNLREEFSLTDKQAEAILDISLRKLTSLEKNKFIDEGNSLS 1769
            NLDRVID+I++A  +  A+  L+EEF+L+DKQAEA+LDI+LR+L  LE+ KF+DE  SL 
Sbjct: 483  NLDRVIDIIKEAKGNAAASAGLKEEFNLSDKQAEAVLDINLRRLNLLERKKFVDESASLM 542

Query: 1770 RXXXXXXXXXXXXXXXXXVIEAEANEIKNKFFTPRRSMLEDTDSGQLEDIDVIPNEEMLL 1949
                              +IE EA E+KNKF +PRRS+L+D+D GQLEDIDVIPNEEMLL
Sbjct: 543  EQISKITELLSSRKNILQLIEQEALELKNKFSSPRRSILDDSDGGQLEDIDVIPNEEMLL 602

Query: 1950 ALSEKGYLKRMRPDTFNLQNRGTIGKSVGKLRVNDTMSDFIVCRTHDHVLYFSDKGTVYS 2129
            A SEKGY+KRM+P TFNLQNRGTIGKSVGKLRVND MSDFIVCR+HDHVLYFSD+G VYS
Sbjct: 603  AFSEKGYVKRMKPSTFNLQNRGTIGKSVGKLRVNDAMSDFIVCRSHDHVLYFSDRGIVYS 662

Query: 2130 ARAYKIPECSRAGAGTPLIQILSLSDGERVTSIIPVSEFEGDQYLMMLTMKGYIKKVSLN 2309
            A AYKIPE SR  AGTPLIQI+SLS+GER+TSI+PVSEF  DQ+L+MLT+ GYIKKVSLN
Sbjct: 663  AYAYKIPESSRTAAGTPLIQIISLSEGERITSIVPVSEFAEDQFLVMLTVNGYIKKVSLN 722

Query: 2310 YFSSIRSTGIIAIQLVPGDELKWVRRCTNDDFVAMASQNGMVILSPCENIRALGRNTRGG 2489
            YFS+IRSTGIIAIQLVPGDELKWVR CTNDD VAMASQNGMVILS C+ IRAL RNTRG 
Sbjct: 723  YFSAIRSTGIIAIQLVPGDELKWVRCCTNDDLVAMASQNGMVILSSCDIIRALSRNTRGA 782

Query: 2490 VAMRLKQGDKMASMDIIPASFGQKLEKGSETQQTHGKGYTGPWLLFISESGFGKRVPLAS 2669
            +AMRLK+GDKMASMDIIPA     L+K +E   ++ KG +GPWLLF+SE+G+GKRVPL+S
Sbjct: 783  IAMRLKEGDKMASMDIIPAPRHTDLDKAAEDSISYDKGGSGPWLLFVSENGYGKRVPLSS 842

Query: 2670 FRMSPLNRVGLKGYKFSLEDRLAAVFVVGFSVGEDGESDEQVVLVSQSGTVNRIKVRDIS 2849
            F+ SPLNRVGL GYKFS EDRLAAVFVVGFS+ E+GESDEQVVLVSQSGTVNRIKVRDIS
Sbjct: 843  FKKSPLNRVGLIGYKFSSEDRLAAVFVVGFSLTENGESDEQVVLVSQSGTVNRIKVRDIS 902

Query: 2850 IQSRFARGVILMRLEHAGKIQ 2912
            IQSR+ARGVILMRLEHAGKIQ
Sbjct: 903  IQSRYARGVILMRLEHAGKIQ 923



 Score =  445 bits (1144), Expect(2) = 0.0
 Identities = 235/337 (69%), Positives = 261/337 (77%), Gaps = 2/337 (0%)
 Frame = +2

Query: 206  PEPA-KPHMAFATGLRLLRSHPHTLSFSLTAPSRL-LLARRVSELRFLSAVGPHQRRRLF 379
            P P+  P M+ +  LR+     H L     APSR   L R VS LRFLS+  P +R    
Sbjct: 8    PTPSISPSMSLSATLRVSSFLRHNL---FLAPSRASALRRNVSHLRFLSS-SPFRRTVHH 63

Query: 380  XXXXXXXXXXXXXXXXXXXXXXRDVXXXXXXXXXXRIVVTELHKEATEAYMSYAMSVLLG 559
                                    V          R++  ELHKEA ++YM+YA+SVLLG
Sbjct: 64   PVKARRGGGQEDDGGLGNGSLTAVVKDGTGDGRDGRVLPFELHKEAMDSYMAYALSVLLG 123

Query: 560  RALPDVRDGLKPVHRRILYAMHELGLSSKKPYKKCARVVGEVLGKFHPHGDSAVYDSLVR 739
            RALPDVRDGLKPVHRRILYAMHELGLSS+KP+KKCARVVGEVLGKFHPHGD+AVYDS+VR
Sbjct: 124  RALPDVRDGLKPVHRRILYAMHELGLSSRKPFKKCARVVGEVLGKFHPHGDNAVYDSMVR 183

Query: 740  MAQDFSLRSPLIRGHGNFGSIDADPAAAMRYTECRLEALTEAMLLADLEQDTVDYVPNFD 919
            MAQDFSLR PLI+GHGNFGSIDADP AAMRYTECRLEALTEA+LLADLEQDTVD+VPNFD
Sbjct: 184  MAQDFSLRFPLIQGHGNFGSIDADPPAAMRYTECRLEALTEAILLADLEQDTVDFVPNFD 243

Query: 920  NSQKEPSLLPARIPNLLLNGASGIAVGMATNIPPHNLGELVDALSVLIHNPEATLQELLE 1099
            +SQKEPSLLPAR+P LLLNG+SGIAVGMATNIPPHNLGELVD L  LIHNPEA+LQELLE
Sbjct: 244  SSQKEPSLLPARLPTLLLNGSSGIAVGMATNIPPHNLGELVDVLCALIHNPEASLQELLE 303

Query: 1100 YMPGPDFPTGGIIMGNLGILEAYRTGRGRVVIRGKTD 1210
            YMPGPDFPTGG+IMGNLGIL AYRTGRGR+V+RGK D
Sbjct: 304  YMPGPDFPTGGLIMGNLGILAAYRTGRGRIVVRGKAD 340


>gb|KJB75042.1| hypothetical protein B456_012G020500 [Gossypium raimondii]
          Length = 931

 Score =  850 bits (2195), Expect(2) = 0.0
 Identities = 431/561 (76%), Positives = 492/561 (87%)
 Frame = +3

Query: 1230 NKASLVEKIAELVENKILEGISDIRDESDRSGMRIVIEVKRGSDPSIVLNNLHHLTALQS 1409
            NK+SLVEKIAELVENK LEGI+DIRDESDRSGMR+VIE+KRG+DPSIVLNNL+ LTALQS
Sbjct: 333  NKSSLVEKIAELVENKTLEGINDIRDESDRSGMRVVIELKRGADPSIVLNNLYRLTALQS 392

Query: 1410 TFSCNMVGILNGQPKQMGLKELLQAFLDFRCSVVERRAKFKLSQAQDRYHIVEGIIIGLD 1589
            +F+CNMVGIL+GQPKQMGLKELLQAFL+FRCSVVERRA++KLSQAQDR HIVEGI++GLD
Sbjct: 393  SFNCNMVGILDGQPKQMGLKELLQAFLEFRCSVVERRARYKLSQAQDRRHIVEGIVVGLD 452

Query: 1590 NLDRVIDVIRKASSHVLAATNLREEFSLTDKQAEAILDISLRKLTSLEKNKFIDEGNSLS 1769
            NLDRVID+I++A  +  A+  L+EEF+L+DKQAEA+LDI+LR+L  LE+ KF+DE  SL 
Sbjct: 453  NLDRVIDIIKEAKGNAAASAGLKEEFNLSDKQAEAVLDINLRRLNLLERKKFVDESASLM 512

Query: 1770 RXXXXXXXXXXXXXXXXXVIEAEANEIKNKFFTPRRSMLEDTDSGQLEDIDVIPNEEMLL 1949
                              +IE EA E+KNKF +PRRS+L+D+D GQLEDIDVIPNEEMLL
Sbjct: 513  EQISKITELLSSRKNILQLIEQEALELKNKFSSPRRSILDDSDGGQLEDIDVIPNEEMLL 572

Query: 1950 ALSEKGYLKRMRPDTFNLQNRGTIGKSVGKLRVNDTMSDFIVCRTHDHVLYFSDKGTVYS 2129
            A SEKGY+KRM+P TFNLQNRGTIGKSVGKLRVND MSDFIVCR+HDHVLYFSD+G VYS
Sbjct: 573  AFSEKGYVKRMKPSTFNLQNRGTIGKSVGKLRVNDAMSDFIVCRSHDHVLYFSDRGIVYS 632

Query: 2130 ARAYKIPECSRAGAGTPLIQILSLSDGERVTSIIPVSEFEGDQYLMMLTMKGYIKKVSLN 2309
            A AYKIPE SR  AGTPLIQI+SLS+GER+TSI+PVSEF  DQ+L+MLT+ GYIKKVSLN
Sbjct: 633  AYAYKIPESSRTAAGTPLIQIISLSEGERITSIVPVSEFAEDQFLVMLTVNGYIKKVSLN 692

Query: 2310 YFSSIRSTGIIAIQLVPGDELKWVRRCTNDDFVAMASQNGMVILSPCENIRALGRNTRGG 2489
            YFS+IRSTGIIAIQLVPGDELKWVR CTNDD VAMASQNGMVILS C+ IRAL RNTRG 
Sbjct: 693  YFSAIRSTGIIAIQLVPGDELKWVRCCTNDDLVAMASQNGMVILSSCDIIRALSRNTRGA 752

Query: 2490 VAMRLKQGDKMASMDIIPASFGQKLEKGSETQQTHGKGYTGPWLLFISESGFGKRVPLAS 2669
            +AMRLK+GDKMASMDIIPA     L+K +E   ++ KG +GPWLLF+SE+G+GKRVPL+S
Sbjct: 753  IAMRLKEGDKMASMDIIPAPRHTDLDKAAEDSISYDKGGSGPWLLFVSENGYGKRVPLSS 812

Query: 2670 FRMSPLNRVGLKGYKFSLEDRLAAVFVVGFSVGEDGESDEQVVLVSQSGTVNRIKVRDIS 2849
            F+ SPLNRVGL GYKFS EDRLAAVFVVGFS+ E+GESDEQVVLVSQSGTVNRIKVRDIS
Sbjct: 813  FKKSPLNRVGLIGYKFSSEDRLAAVFVVGFSLTENGESDEQVVLVSQSGTVNRIKVRDIS 872

Query: 2850 IQSRFARGVILMRLEHAGKIQ 2912
            IQSR+ARGVILMRLEHAGKIQ
Sbjct: 873  IQSRYARGVILMRLEHAGKIQ 893



 Score =  406 bits (1044), Expect(2) = 0.0
 Identities = 218/329 (66%), Positives = 242/329 (73%), Gaps = 1/329 (0%)
 Frame = +2

Query: 227  MAFATGLRLLRSHPHTLSFSLTAPSRL-LLARRVSELRFLSAVGPHQRRRLFXXXXXXXX 403
            M+ +  LR+     H L     APSR   L R VS LRFLS+  P +R            
Sbjct: 1    MSLSATLRVSSFLRHNL---FLAPSRASALRRNVSHLRFLSS-SPFRRTVHHPVKARRGG 56

Query: 404  XXXXXXXXXXXXXXRDVXXXXXXXXXXRIVVTELHKEATEAYMSYAMSVLLGRALPDVRD 583
                            V          R++  ELHKEA ++YM+YA+SVLLGRALPDVRD
Sbjct: 57   GQEDDGGLGNGSLTAVVKDGTGDGRDGRVLPFELHKEAMDSYMAYALSVLLGRALPDVRD 116

Query: 584  GLKPVHRRILYAMHELGLSSKKPYKKCARVVGEVLGKFHPHGDSAVYDSLVRMAQDFSLR 763
            GLKPVHRRILYAMHELGLSS+KP+KKCARVVGEVLGKFHPHGD+AVYDS+VRMAQDFSLR
Sbjct: 117  GLKPVHRRILYAMHELGLSSRKPFKKCARVVGEVLGKFHPHGDNAVYDSMVRMAQDFSLR 176

Query: 764  SPLIRGHGNFGSIDADPAAAMRYTECRLEALTEAMLLADLEQDTVDYVPNFDNSQKEPSL 943
             PLI+GHGNFGSIDADP AAMRYTECRLE               VD+VPNFD+SQKEPSL
Sbjct: 177  FPLIQGHGNFGSIDADPPAAMRYTECRLE---------------VDFVPNFDSSQKEPSL 221

Query: 944  LPARIPNLLLNGASGIAVGMATNIPPHNLGELVDALSVLIHNPEATLQELLEYMPGPDFP 1123
            LPAR+P LLLNG+SGIAVGMATNIPPHNLGELVD L  LIHNPEA+LQELLEYMPGPDFP
Sbjct: 222  LPARLPTLLLNGSSGIAVGMATNIPPHNLGELVDVLCALIHNPEASLQELLEYMPGPDFP 281

Query: 1124 TGGIIMGNLGILEAYRTGRGRVVIRGKTD 1210
            TGG+IMGNLGIL AYRTGRGR+V+RGK D
Sbjct: 282  TGGLIMGNLGILAAYRTGRGRIVVRGKAD 310


>ref|XP_008445382.1| PREDICTED: DNA gyrase subunit A, chloroplastic/mitochondrial [Cucumis
            melo]
          Length = 923

 Score =  850 bits (2195), Expect(2) = 0.0
 Identities = 436/561 (77%), Positives = 490/561 (87%)
 Frame = +3

Query: 1230 NKASLVEKIAELVENKILEGISDIRDESDRSGMRIVIEVKRGSDPSIVLNNLHHLTALQS 1409
            NK++LVEKIAELVENK L+GISDIRDESDR+GMRIVIE+KRG+DPSI+ NNL+ LT+LQS
Sbjct: 352  NKSALVEKIAELVENKTLDGISDIRDESDRTGMRIVIELKRGADPSIIQNNLYRLTSLQS 411

Query: 1410 TFSCNMVGILNGQPKQMGLKELLQAFLDFRCSVVERRAKFKLSQAQDRYHIVEGIIIGLD 1589
            +FSCNMVGI+NGQPK MGLKELLQAFLDFRCSVVERRA+FKLSQAQ+R HIVEGI+IGLD
Sbjct: 412  SFSCNMVGIINGQPKLMGLKELLQAFLDFRCSVVERRARFKLSQAQERRHIVEGIVIGLD 471

Query: 1590 NLDRVIDVIRKASSHVLAATNLREEFSLTDKQAEAILDISLRKLTSLEKNKFIDEGNSLS 1769
            NLD VI +IR+ASSH +A+ +LR +F+L++KQAEA+LDI+LR+LT LE+ KF DE  SL+
Sbjct: 472  NLDGVIRLIREASSHSIASASLRTQFNLSEKQAEAVLDINLRRLTHLERKKFTDESKSLT 531

Query: 1770 RXXXXXXXXXXXXXXXXXVIEAEANEIKNKFFTPRRSMLEDTDSGQLEDIDVIPNEEMLL 1949
                              +IE EA E+KNKF +PRRS+LEDTDSGQLEDIDVIPNEEMLL
Sbjct: 532  ENISKLEELLSSRKNILQLIEQEATELKNKFPSPRRSVLEDTDSGQLEDIDVIPNEEMLL 591

Query: 1950 ALSEKGYLKRMRPDTFNLQNRGTIGKSVGKLRVNDTMSDFIVCRTHDHVLYFSDKGTVYS 2129
            ALSEKGY+KRM+P+TF+LQ+RGTIGKSVGKLRVND MSDFIVCR HDHVLYFSDKG VYS
Sbjct: 592  ALSEKGYVKRMKPNTFSLQHRGTIGKSVGKLRVNDAMSDFIVCRAHDHVLYFSDKGIVYS 651

Query: 2130 ARAYKIPECSRAGAGTPLIQILSLSDGERVTSIIPVSEFEGDQYLMMLTMKGYIKKVSLN 2309
            ARAYKIPEC R  AGTPL+QILSLSDGER+TSIIPVSEF  DQ+L+MLT  GYIKKVSLN
Sbjct: 652  ARAYKIPECGRTAAGTPLVQILSLSDGERITSIIPVSEFNEDQFLLMLTAYGYIKKVSLN 711

Query: 2310 YFSSIRSTGIIAIQLVPGDELKWVRRCTNDDFVAMASQNGMVILSPCENIRALGRNTRGG 2489
            +FSSIR+TGIIAIQLV GDELKWVRRCTND+ VAMASQNGMVILS C+ +RALGRNTRG 
Sbjct: 712  FFSSIRTTGIIAIQLVSGDELKWVRRCTNDNLVAMASQNGMVILSSCDTVRALGRNTRGA 771

Query: 2490 VAMRLKQGDKMASMDIIPASFGQKLEKGSETQQTHGKGYTGPWLLFISESGFGKRVPLAS 2669
            VAMRLK GDKMASMDIIPA+    LE+ S       K   GPWLLF+SESGFGKRVPL+S
Sbjct: 772  VAMRLKAGDKMASMDIIPAAVWNDLERNS------SKISNGPWLLFVSESGFGKRVPLSS 825

Query: 2670 FRMSPLNRVGLKGYKFSLEDRLAAVFVVGFSVGEDGESDEQVVLVSQSGTVNRIKVRDIS 2849
            FR+SPL RVGL GYKFS EDRLAAVFVVGFS+ EDGESDEQVVLVSQSGTVNRIKVRD+S
Sbjct: 826  FRLSPLRRVGLIGYKFSSEDRLAAVFVVGFSLAEDGESDEQVVLVSQSGTVNRIKVRDVS 885

Query: 2850 IQSRFARGVILMRLEHAGKIQ 2912
            IQSRFARGVILMRL+HAGKIQ
Sbjct: 886  IQSRFARGVILMRLDHAGKIQ 906



 Score =  443 bits (1139), Expect(2) = 0.0
 Identities = 214/242 (88%), Positives = 233/242 (96%)
 Frame = +2

Query: 485  RIVVTELHKEATEAYMSYAMSVLLGRALPDVRDGLKPVHRRILYAMHELGLSSKKPYKKC 664
            RIV   LHKEAT+AYM+YAMSVLLGRALPDVRDGLKPVHRRIL+AMHELGLSS+KP+KKC
Sbjct: 88   RIVHAALHKEATDAYMAYAMSVLLGRALPDVRDGLKPVHRRILFAMHELGLSSRKPFKKC 147

Query: 665  ARVVGEVLGKFHPHGDSAVYDSLVRMAQDFSLRSPLIRGHGNFGSIDADPAAAMRYTECR 844
            ARVVGEVLGKFHPHGD+AVYDSLVRMAQDFSLRSPLI+GHGNFGS+DADP AAMRYTECR
Sbjct: 148  ARVVGEVLGKFHPHGDTAVYDSLVRMAQDFSLRSPLIQGHGNFGSVDADPPAAMRYTECR 207

Query: 845  LEALTEAMLLADLEQDTVDYVPNFDNSQKEPSLLPARIPNLLLNGASGIAVGMATNIPPH 1024
            LEAL+EAMLL+DLE +TVD+VPNFDNSQKEPSLLPAR+P LLLNG+SGIAVGMATNIPPH
Sbjct: 208  LEALSEAMLLSDLEMNTVDFVPNFDNSQKEPSLLPARLPTLLLNGSSGIAVGMATNIPPH 267

Query: 1025 NLGELVDALSVLIHNPEATLQELLEYMPGPDFPTGGIIMGNLGILEAYRTGRGRVVIRGK 1204
            NLGE+VDAL VLIHNPEATLQELLEYMPGPDFPTGG+IMGN GILEAYRTGRGR+ +RGK
Sbjct: 268  NLGEVVDALCVLIHNPEATLQELLEYMPGPDFPTGGLIMGNNGILEAYRTGRGRITVRGK 327

Query: 1205 TD 1210
            T+
Sbjct: 328  TE 329


>ref|XP_010658997.1| PREDICTED: DNA gyrase subunit A, chloroplastic/mitochondrial isoform
            X2 [Vitis vinifera]
          Length = 924

 Score =  849 bits (2193), Expect(2) = 0.0
 Identities = 436/561 (77%), Positives = 488/561 (86%)
 Frame = +3

Query: 1230 NKASLVEKIAELVENKILEGISDIRDESDRSGMRIVIEVKRGSDPSIVLNNLHHLTALQS 1409
            NK+SLVEKIAELVENK L+GISDIRDESDRSGMRIVIE+KRGSDPSIVLN L+ LTALQS
Sbjct: 343  NKSSLVEKIAELVENKSLDGISDIRDESDRSGMRIVIELKRGSDPSIVLNKLYRLTALQS 402

Query: 1410 TFSCNMVGILNGQPKQMGLKELLQAFLDFRCSVVERRAKFKLSQAQDRYHIVEGIIIGLD 1589
            +FSCNM+GIL+GQPK MGLKELLQAFLDFRCSVVERRA+FKLSQAQ+R HIVEGI++GLD
Sbjct: 403  SFSCNMIGILDGQPKLMGLKELLQAFLDFRCSVVERRARFKLSQAQERRHIVEGIVVGLD 462

Query: 1590 NLDRVIDVIRKASSHVLAATNLREEFSLTDKQAEAILDISLRKLTSLEKNKFIDEGNSLS 1769
            NLD VI VI++A S+ +A+T LR EF L+++QAEAILDISLR++T LE+ KF+ E  SL 
Sbjct: 463  NLDAVIRVIKEAPSNAMASTGLRNEFGLSERQAEAILDISLRRITRLEREKFVTESKSLM 522

Query: 1770 RXXXXXXXXXXXXXXXXXVIEAEANEIKNKFFTPRRSMLEDTDSGQLEDIDVIPNEEMLL 1949
                              +IE EA E+KN+F TPRRSMLEDTDSGQLED+DVIPNEEMLL
Sbjct: 523  EQISKLQELLSSRKQILQLIEQEAIELKNRFSTPRRSMLEDTDSGQLEDVDVIPNEEMLL 582

Query: 1950 ALSEKGYLKRMRPDTFNLQNRGTIGKSVGKLRVNDTMSDFIVCRTHDHVLYFSDKGTVYS 2129
            A+SEKGY+KRM+P+TFNLQNRGTIGKSVGKLRVND MSDFIVC  HD+VLYFSD+G V+S
Sbjct: 583  AVSEKGYVKRMKPNTFNLQNRGTIGKSVGKLRVNDAMSDFIVCHAHDYVLYFSDRGIVHS 642

Query: 2130 ARAYKIPECSRAGAGTPLIQILSLSDGERVTSIIPVSEFEGDQYLMMLTMKGYIKKVSLN 2309
            ARAYKIPEC+R  AGTPL+QIL LSDGER+TSIIPVSEF  DQ+L+MLTM GYIKKVSLN
Sbjct: 643  ARAYKIPECTRTAAGTPLVQILCLSDGERITSIIPVSEFAEDQFLLMLTMNGYIKKVSLN 702

Query: 2310 YFSSIRSTGIIAIQLVPGDELKWVRRCTNDDFVAMASQNGMVILSPCENIRALGRNTRGG 2489
            +FSSIRSTGIIAIQLVPGDELKWVR CTNDD VAMASQNGMVILS CE IRALGRNTRG 
Sbjct: 703  FFSSIRSTGIIAIQLVPGDELKWVRCCTNDDLVAMASQNGMVILSSCEIIRALGRNTRGS 762

Query: 2490 VAMRLKQGDKMASMDIIPASFGQKLEKGSETQQTHGKGYTGPWLLFISESGFGKRVPLAS 2669
            +AMRLKQGDKMASMDIIPA+  + LEK  E +Q+  +   GPWLLF+SESG GKRVPL+ 
Sbjct: 763  IAMRLKQGDKMASMDIIPAAIRKDLEKALEDRQSRARNLNGPWLLFVSESGLGKRVPLSR 822

Query: 2670 FRMSPLNRVGLKGYKFSLEDRLAAVFVVGFSVGEDGESDEQVVLVSQSGTVNRIKVRDIS 2849
            FR+SPLNRVGL GYKFS ED LAAVFVVGFS+  DGESDEQVVLVSQSGT+NRIKV DIS
Sbjct: 823  FRLSPLNRVGLIGYKFSAEDHLAAVFVVGFSL-TDGESDEQVVLVSQSGTINRIKVWDIS 881

Query: 2850 IQSRFARGVILMRLEHAGKIQ 2912
            IQSRFARGVILMRLE+AGKIQ
Sbjct: 882  IQSRFARGVILMRLEYAGKIQ 902



 Score =  456 bits (1173), Expect(2) = 0.0
 Identities = 238/330 (72%), Positives = 260/330 (78%)
 Frame = +2

Query: 221  PHMAFATGLRLLRSHPHTLSFSLTAPSRLLLARRVSELRFLSAVGPHQRRRLFXXXXXXX 400
            P MAF+    LLR       FSL       L  R+S LRFLS   P ++  L        
Sbjct: 13   PPMAFSAASSLLRHQ-----FSLP------LHHRLSYLRFLSVTAPPRKPHLVRARRRDD 61

Query: 401  XXXXXXXXXXXXXXXRDVXXXXXXXXXXRIVVTELHKEATEAYMSYAMSVLLGRALPDVR 580
                             +          RIV TELHKEATEAYM+YAMSVLLGRALPDVR
Sbjct: 62   EEGNG-----------SLVLKEKDGRDGRIVPTELHKEATEAYMAYAMSVLLGRALPDVR 110

Query: 581  DGLKPVHRRILYAMHELGLSSKKPYKKCARVVGEVLGKFHPHGDSAVYDSLVRMAQDFSL 760
            DGLKPVHRRIL+AMHELGLSS+KPYKKCARVVGEVLGKFHPHGD+AVYDSLVRMAQDFSL
Sbjct: 111  DGLKPVHRRILFAMHELGLSSRKPYKKCARVVGEVLGKFHPHGDTAVYDSLVRMAQDFSL 170

Query: 761  RSPLIRGHGNFGSIDADPAAAMRYTECRLEALTEAMLLADLEQDTVDYVPNFDNSQKEPS 940
            R PLI+GHGNFGS+DADP AAMRYTECRLEALTEAMLLADLEQDTVD++PNFDNSQKEPS
Sbjct: 171  RCPLIQGHGNFGSVDADPPAAMRYTECRLEALTEAMLLADLEQDTVDFLPNFDNSQKEPS 230

Query: 941  LLPARIPNLLLNGASGIAVGMATNIPPHNLGELVDALSVLIHNPEATLQELLEYMPGPDF 1120
            LLPAR+P LLLNG+SGIAVGMATNIPPHN+GELVD L VLI NPEATLQELLEYMPGPDF
Sbjct: 231  LLPARLPTLLLNGSSGIAVGMATNIPPHNIGELVDVLCVLIRNPEATLQELLEYMPGPDF 290

Query: 1121 PTGGIIMGNLGILEAYRTGRGRVVIRGKTD 1210
            PTGG+IMGN+GILEAYRTGRGR+++RGKT+
Sbjct: 291  PTGGLIMGNIGILEAYRTGRGRIIVRGKTE 320


>ref|XP_007010651.1| DNA gyrase subunit A [Theobroma cacao] gi|508727564|gb|EOY19461.1|
            DNA gyrase subunit A [Theobroma cacao]
          Length = 1368

 Score =  847 bits (2187), Expect(2) = 0.0
 Identities = 434/561 (77%), Positives = 486/561 (86%)
 Frame = +3

Query: 1230 NKASLVEKIAELVENKILEGISDIRDESDRSGMRIVIEVKRGSDPSIVLNNLHHLTALQS 1409
            NK+SLVEKIAELVENK LEGISDIRDESDRSGMR+VIE+KRGSDPSIVLNNL+ LTALQS
Sbjct: 346  NKSSLVEKIAELVENKSLEGISDIRDESDRSGMRVVIELKRGSDPSIVLNNLYRLTALQS 405

Query: 1410 TFSCNMVGILNGQPKQMGLKELLQAFLDFRCSVVERRAKFKLSQAQDRYHIVEGIIIGLD 1589
            +FSCNMVGIL+GQPKQMGLKELLQ+FLDFRCSVVERRA++KLSQAQDR HIVEGI++GLD
Sbjct: 406  SFSCNMVGILDGQPKQMGLKELLQSFLDFRCSVVERRARYKLSQAQDRRHIVEGIVVGLD 465

Query: 1590 NLDRVIDVIRKASSHVLAATNLREEFSLTDKQAEAILDISLRKLTSLEKNKFIDEGNSLS 1769
            NLD VID+IR+ASS+  A+  LR EF+L+DKQAEAILDI+LR+L  LE+ KF+ E  SL 
Sbjct: 466  NLDSVIDIIREASSNAAASAGLRNEFNLSDKQAEAILDINLRRLNLLERKKFVGESRSLM 525

Query: 1770 RXXXXXXXXXXXXXXXXXVIEAEANEIKNKFFTPRRSMLEDTDSGQLEDIDVIPNEEMLL 1949
                              +IE EA E+K+KF +PRRS+LED+D GQLEDIDVIPNEEMLL
Sbjct: 526  EQISKLTELLSSRKNILQLIEQEAIELKSKFSSPRRSILEDSDGGQLEDIDVIPNEEMLL 585

Query: 1950 ALSEKGYLKRMRPDTFNLQNRGTIGKSVGKLRVNDTMSDFIVCRTHDHVLYFSDKGTVYS 2129
            A SEKGY+KRM+P+TFNLQNRGTIGKSVGKLR ND MSDFIVCR HDHVLYFSDKG VY+
Sbjct: 586  AFSEKGYVKRMKPNTFNLQNRGTIGKSVGKLRFNDAMSDFIVCRAHDHVLYFSDKGIVYT 645

Query: 2130 ARAYKIPECSRAGAGTPLIQILSLSDGERVTSIIPVSEFEGDQYLMMLTMKGYIKKVSLN 2309
            ARAYKIPE SR  AGTPL+QI+SLS+GER+TSII VSEF  DQ+L MLT+ GYIKKVSLN
Sbjct: 646  ARAYKIPESSRTAAGTPLVQIISLSEGERITSIISVSEFAEDQFLAMLTVNGYIKKVSLN 705

Query: 2310 YFSSIRSTGIIAIQLVPGDELKWVRRCTNDDFVAMASQNGMVILSPCENIRALGRNTRGG 2489
            YFS+IRSTGIIAIQLVPGDELKWVR C NDD VAMASQNGMVILS C  IRAL RNTRG 
Sbjct: 706  YFSAIRSTGIIAIQLVPGDELKWVRCCINDDLVAMASQNGMVILSSCGIIRALSRNTRGA 765

Query: 2490 VAMRLKQGDKMASMDIIPASFGQKLEKGSETQQTHGKGYTGPWLLFISESGFGKRVPLAS 2669
            +AMRLK+GDKMASMDIIPA   + L+K  E    + KG +GPWLLF+SE+G+GKRVPL+S
Sbjct: 766  IAMRLKEGDKMASMDIIPAPRHKDLDKAEEDSMNNNKGGSGPWLLFVSENGYGKRVPLSS 825

Query: 2670 FRMSPLNRVGLKGYKFSLEDRLAAVFVVGFSVGEDGESDEQVVLVSQSGTVNRIKVRDIS 2849
            F+ SPLNRVGL GYKFS EDRLAAVFVVGFS+ EDGESDEQVVLVSQSGTVNRIKVRDIS
Sbjct: 826  FKRSPLNRVGLIGYKFSSEDRLAAVFVVGFSLAEDGESDEQVVLVSQSGTVNRIKVRDIS 885

Query: 2850 IQSRFARGVILMRLEHAGKIQ 2912
            IQSR+ARGVILMRLE+AGKIQ
Sbjct: 886  IQSRYARGVILMRLEYAGKIQ 906



 Score =  444 bits (1142), Expect(2) = 0.0
 Identities = 215/242 (88%), Positives = 231/242 (95%)
 Frame = +2

Query: 485  RIVVTELHKEATEAYMSYAMSVLLGRALPDVRDGLKPVHRRILYAMHELGLSSKKPYKKC 664
            R+V TELHKEATE+YM+YA+SVLLGRALPDVRDGLKPVHRRIL+AMHELGLSS+KP+KKC
Sbjct: 82   RVVPTELHKEATESYMAYALSVLLGRALPDVRDGLKPVHRRILFAMHELGLSSRKPFKKC 141

Query: 665  ARVVGEVLGKFHPHGDSAVYDSLVRMAQDFSLRSPLIRGHGNFGSIDADPAAAMRYTECR 844
            ARVVGEVLGKFHPHGD+AVYDSLVRMAQDFSLR PLI+GHGNFGSIDADP AAMRYTECR
Sbjct: 142  ARVVGEVLGKFHPHGDTAVYDSLVRMAQDFSLRFPLIQGHGNFGSIDADPPAAMRYTECR 201

Query: 845  LEALTEAMLLADLEQDTVDYVPNFDNSQKEPSLLPARIPNLLLNGASGIAVGMATNIPPH 1024
            LEALTEA+LLADLEQDTVD+VPNFDNS KEPSLLPAR+P LLLNG SGIAVGMATNIPPH
Sbjct: 202  LEALTEAILLADLEQDTVDFVPNFDNSHKEPSLLPARLPTLLLNGTSGIAVGMATNIPPH 261

Query: 1025 NLGELVDALSVLIHNPEATLQELLEYMPGPDFPTGGIIMGNLGILEAYRTGRGRVVIRGK 1204
            NLGELVD L  LI NPEA+LQELLEYMPGPDFPTGG+IMGNLGILEAYRTGRGR+V+RGK
Sbjct: 262  NLGELVDVLCALIQNPEASLQELLEYMPGPDFPTGGLIMGNLGILEAYRTGRGRIVVRGK 321

Query: 1205 TD 1210
             D
Sbjct: 322  AD 323