BLASTX nr result

ID: Rehmannia28_contig00009507 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00009507
         (821 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ERN11849.1| hypothetical protein AMTR_s00020p00100020 [Ambore...   121   8e-32
emb|CAN65166.1| hypothetical protein VITISV_029400 [Vitis vinifera]   125   3e-31
gb|KRH04768.1| hypothetical protein GLYMA_17G185400 [Glycine max]     112   2e-28
emb|CBI40707.3| unnamed protein product [Vitis vinifera]              109   2e-23
gb|KCW59989.1| hypothetical protein EUGRSUZ_H02721 [Eucalyptus g...    96   7e-22
emb|CBI31112.3| unnamed protein product [Vitis vinifera]               89   2e-16
gb|KJB09760.1| hypothetical protein B456_001G162600 [Gossypium r...    82   4e-16
ref|XP_013442761.1| ribosomal protein S10 [Medicago truncatula] ...    62   2e-09
gb|ERM93694.1| hypothetical protein AMTR_s00004p00209040 [Ambore...    42   3e-09
ref|XP_012436112.1| PREDICTED: ribosomal protein S10, mitochondr...    60   9e-08

>gb|ERN11849.1| hypothetical protein AMTR_s00020p00100020 [Amborella trichopoda]
          Length = 85

 Score =  121 bits (304), Expect = 8e-32
 Identities = 57/67 (85%), Positives = 58/67 (86%)
 Frame = -1

Query: 443 PVFWFPLGLPCSQVDPMAARKGDLVLYSGDLFPTEARKLPSCPRSHSVNRKGKPTHLSAP 264
           PVFWFPLGLPCSQVDP A RKGDLVLYS DL PTEA KLPSCP+SHSVNRKGKPTH SAP
Sbjct: 5   PVFWFPLGLPCSQVDPNAVRKGDLVLYSDDLLPTEACKLPSCPKSHSVNRKGKPTHPSAP 64

Query: 263 LVDRCGF 243
           LVD   F
Sbjct: 65  LVDAVWF 71


>emb|CAN65166.1| hypothetical protein VITISV_029400 [Vitis vinifera]
          Length = 267

 Score =  125 bits (315), Expect = 3e-31
 Identities = 90/175 (51%), Positives = 96/175 (54%), Gaps = 3/175 (1%)
 Frame = -3

Query: 693 RFAVAKLRPRLLVASGRLIPSPEIQVSTGKDLLIPRGRAGLEASY--LLPISXXXXXXXX 520
           RF  AKLRPRLLVASGRLIPSPEIQVSTGKDLLIPRGRAGLEASY  LL           
Sbjct: 35  RFRRAKLRPRLLVASGRLIPSPEIQVSTGKDLLIPRGRAGLEASYRKLLATRFYARAAAY 94

Query: 519 XXXXXXXXXXXXAFAFWIVFCPMRYPR-FLVPIGFTLFTGRPHGSKKRRSCAILR*SLSY 343
                       +  F  +  PM   +  LV     LF   P  ++K  SC         
Sbjct: 95  PIGLEASYLSPISRPFNFLVDPMAARKGDLVLYSGDLF---PTEARKLPSC--------- 142

Query: 342 RGTQTPIVSQITFRESKGEAYXXXXXXXXXXRFYEASKHSSLTLINQEVCRHSLR 178
                   +QITFRESKGEAY          RFYEASKHSSL LINQE CRHSLR
Sbjct: 143 --------TQITFRESKGEAYSSISSSRRSVRFYEASKHSSLALINQEFCRHSLR 189


>gb|KRH04768.1| hypothetical protein GLYMA_17G185400 [Glycine max]
          Length = 62

 Score =  112 bits (280), Expect = 2e-28
 Identities = 56/62 (90%), Positives = 56/62 (90%), Gaps = 1/62 (1%)
 Frame = -1

Query: 395 MAARK-GDLVLYSGDLFPTEARKLPSCPRSHSVNRKGKPTHLSAPLVDRCGFTKRLSTVH 219
           MAARK GDLVLY GDLFPTEARK PSCPRSHSVNRKGKPTH  APLVDRCGFTKRL TVH
Sbjct: 1   MAARKKGDLVLYFGDLFPTEARKPPSCPRSHSVNRKGKPTHPLAPLVDRCGFTKRLGTVH 60

Query: 218 SR 213
           SR
Sbjct: 61  SR 62


>emb|CBI40707.3| unnamed protein product [Vitis vinifera]
          Length = 574

 Score =  109 bits (272), Expect = 2e-23
 Identities = 52/58 (89%), Positives = 52/58 (89%)
 Frame = +1

Query: 280 VGFPFRFTECDLGHDGSLRASVGKRSPEYSTRSPFLAAMGSTCEQGKPNGNQKTGVPH 453
           VGF FRF ECDLGHDGSLRASVGKRS EYSTRSPFLA MGSTCEQGKPNGNQKTG  H
Sbjct: 515 VGFLFRFIECDLGHDGSLRASVGKRSSEYSTRSPFLATMGSTCEQGKPNGNQKTGGYH 572


>gb|KCW59989.1| hypothetical protein EUGRSUZ_H02721 [Eucalyptus grandis]
          Length = 76

 Score = 95.5 bits (236), Expect = 7e-22
 Identities = 44/47 (93%), Positives = 44/47 (93%)
 Frame = +1

Query: 304 ECDLGHDGSLRASVGKRSPEYSTRSPFLAAMGSTCEQGKPNGNQKTG 444
           ECDLGHDGSL ASVGKRSPEYSTR PFLAAMGSTCEQGKPNGNQK G
Sbjct: 2   ECDLGHDGSLHASVGKRSPEYSTRLPFLAAMGSTCEQGKPNGNQKMG 48



 Score = 53.1 bits (126), Expect = 5e-06
 Identities = 28/47 (59%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
 Frame = +2

Query: 383 FLLPWGRPVNKVNPMGTKKRG-YRIGQKTIQKAKAHPAKGRSFGSLP 520
           FL   G    +  P G +K G Y IGQKTI KAKAHP +GRSFGSLP
Sbjct: 28  FLAAMGSTCEQGKPNGNQKMGGYCIGQKTIHKAKAHPIEGRSFGSLP 74


>emb|CBI31112.3| unnamed protein product [Vitis vinifera]
          Length = 2099

 Score = 89.4 bits (220), Expect = 2e-16
 Identities = 67/165 (40%), Positives = 78/165 (47%), Gaps = 6/165 (3%)
 Frame = +2

Query: 152  QEVYDTTGNLKEWRQTS*LINVSELCLDAS*NRTDLREELIDE*ASPFDSRNVIWDTMGV 331
            ++VYDTTGNLKEWR            L AS          + + +  + +R+        
Sbjct: 1761 RQVYDTTGNLKEWR------------LRAS----------VGKRSPEYSTRSP------- 1791

Query: 332  CVPR*ERDHRSIAQDRLFLLPWGRPVNKVNPMGTKKRG-YRIGQKTIQKAKAHPAKGRSF 508
                             FL   G    +  P G +K G YRIGQKTIQKAKAHPA+GRSF
Sbjct: 1792 -----------------FLAAMGSTCEQGKPNGNQKMGGYRIGQKTIQKAKAHPAEGRSF 1834

Query: 509  GSLPYYXXXXXXXXXX-----R*LASKPARPRGIKRSLPVLTWIS 628
               P                 R LASKPARPRGIKRSLPVLTWIS
Sbjct: 1835 DLTPLLLFKGERVVVDQADYRRQLASKPARPRGIKRSLPVLTWIS 1879


>gb|KJB09760.1| hypothetical protein B456_001G162600 [Gossypium raimondii]
          Length = 118

 Score = 81.6 bits (200), Expect = 4e-16
 Identities = 54/101 (53%), Positives = 60/101 (59%), Gaps = 1/101 (0%)
 Frame = +2

Query: 398 GRPVNKVNPMGTKKRG-YRIGQKTIQKAKAHPAKGRSFGSLPYYXXXXXXXXXXR*LASK 574
           G    +  P G +K G YRIGQKTIQKAK    KG ++                  L + 
Sbjct: 2   GSTCKQGKPNGNQKTGGYRIGQKTIQKAK-RKRKGATY------------------LTNN 42

Query: 575 PARPRGIKRSLPVLTWISGDGIRRPEATSSRGRSLATAKRL 697
             +  GIKRSLPVLTWISGDGIRRPEATSSRGRSLA A RL
Sbjct: 43  --KKGGIKRSLPVLTWISGDGIRRPEATSSRGRSLALADRL 81


>ref|XP_013442761.1| ribosomal protein S10 [Medicago truncatula]
           gi|657370713|gb|KEH16786.1| ribosomal protein S10
           [Medicago truncatula]
          Length = 81

 Score = 61.6 bits (148), Expect(2) = 2e-09
 Identities = 29/34 (85%), Positives = 31/34 (91%), Gaps = 1/34 (2%)
 Frame = +1

Query: 340 SVGKRSPEYSTRSP-FLAAMGSTCEQGKPNGNQK 438
           + GKRSPEYSTRSP FLA MGSTC+QGKPNGNQK
Sbjct: 15  TTGKRSPEYSTRSPCFLAVMGSTCKQGKPNGNQK 48



 Score = 28.5 bits (62), Expect(2) = 2e-09
 Identities = 16/23 (69%), Positives = 17/23 (73%), Gaps = 2/23 (8%)
 Frame = +3

Query: 435 KNGGTAL--GRRRSKKRRLTQLK 497
           K  GT L  GRRRSKK+RLT LK
Sbjct: 48  KREGTTLILGRRRSKKQRLTLLK 70


>gb|ERM93694.1| hypothetical protein AMTR_s00004p00209040 [Amborella trichopoda]
          Length = 172

 Score = 41.6 bits (96), Expect(3) = 3e-09
 Identities = 28/53 (52%), Positives = 32/53 (60%), Gaps = 3/53 (5%)
 Frame = +3

Query: 423 QWEPKNGGTALGRRRSKKRRLTQLKE-GALEAYLI--IKRGKGVR*ARGSLLP 572
           +WE    GTALGRRRSKKRRLT L E G  E Y     + G G+  +R  LLP
Sbjct: 5   KWE----GTALGRRRSKKRRLTHLGEIGNREPYFFQADRLGPGIEVSRQKLLP 53



 Score = 36.6 bits (83), Expect(3) = 3e-09
 Identities = 15/17 (88%), Positives = 16/17 (94%)
 Frame = +2

Query: 605 LPVLTWISGDGIRRPEA 655
           +PVLTWISGDGIRRP A
Sbjct: 70  VPVLTWISGDGIRRPSA 86



 Score = 30.8 bits (68), Expect(3) = 3e-09
 Identities = 12/14 (85%), Positives = 14/14 (100%)
 Frame = +1

Query: 556 EVACFQAGPAARNQ 597
           +VACFQAGPAARN+
Sbjct: 54  QVACFQAGPAARNE 67


>ref|XP_012436112.1| PREDICTED: ribosomal protein S10, mitochondrial [Gossypium
           raimondii]
          Length = 171

 Score = 60.5 bits (145), Expect = 9e-08
 Identities = 28/36 (77%), Positives = 31/36 (86%)
 Frame = +2

Query: 14  VKTPCDLEDIRLLGQAKKIADWMLLPHHAWPFTLRR 121
           VKTPCDL DIRLLGQAK ++D +LLPHHA PFTL R
Sbjct: 101 VKTPCDLGDIRLLGQAKNLSDRVLLPHHARPFTLPR 136


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