BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00009355
         (3195 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011100278.1| PREDICTED: DNA repair protein RAD16 [Sesamum...  1485   0.0  
ref|XP_012841446.1| PREDICTED: DNA repair protein RAD16 [Erythra...  1448   0.0  
gb|EYU34010.1| hypothetical protein MIMGU_mgv1a001140mg [Erythra...  1428   0.0  
ref|XP_009627930.1| PREDICTED: DNA repair protein RAD16 [Nicotia...  1173   0.0  
ref|XP_009795276.1| PREDICTED: DNA repair protein RAD16 isoform ...  1169   0.0  
ref|XP_009795273.1| PREDICTED: DNA repair protein RAD16 isoform ...  1161   0.0  
ref|XP_015076825.1| PREDICTED: DNA repair protein RAD16-like [So...  1159   0.0  
ref|XP_006342255.1| PREDICTED: DNA repair protein RAD16-like [So...  1154   0.0  
ref|XP_004240150.1| PREDICTED: DNA repair protein RAD16-like [So...  1150   0.0  
ref|XP_010657210.1| PREDICTED: DNA repair protein RAD16 [Vitis v...  1139   0.0  
ref|XP_015055166.1| PREDICTED: DNA repair protein RAD16-like [So...  1125   0.0  
emb|CBI28814.3| unnamed protein product [Vitis vinifera]             1122   0.0  
ref|XP_004248914.1| PREDICTED: DNA repair protein RAD16-like [So...  1120   0.0  
ref|XP_007046386.1| Helicase protein with RING/U-box domain isof...  1114   0.0  
ref|XP_007046385.1| Helicase protein with RING/U-box domain isof...  1114   0.0  
gb|KJB30318.1| hypothetical protein B456_005G137100 [Gossypium r...  1101   0.0  
gb|KJB30317.1| hypothetical protein B456_005G137100 [Gossypium r...  1101   0.0  
ref|XP_012478613.1| PREDICTED: DNA repair protein RAD16 isoform ...  1101   0.0  
ref|XP_012478612.1| PREDICTED: DNA repair protein RAD16 isoform ...  1101   0.0  
gb|KHG22444.1| ATP-dependent helicase rhp16 [Gossypium arboreum]     1100   0.0  

>ref|XP_011100278.1| PREDICTED: DNA repair protein RAD16 [Sesamum indicum]
            gi|747104116|ref|XP_011100279.1| PREDICTED: DNA repair
            protein RAD16 [Sesamum indicum]
            gi|747104118|ref|XP_011100280.1| PREDICTED: DNA repair
            protein RAD16 [Sesamum indicum]
          Length = 909

 Score = 1485 bits (3845), Expect = 0.0
 Identities = 753/916 (82%), Positives = 808/916 (88%), Gaps = 1/916 (0%)
 Frame = -2

Query: 2999 MKLRSHTPXXXXXXXXXKLKYGESSDEDGCGAMSSDSDYNALSDEGEDLLNVLEDNTGEE 2820
            MKLRSH           KLKY ESSDEDG GA SSDSDY   S EGEDL + LED+  EE
Sbjct: 1    MKLRSHAAGPSSSKGKKKLKYRESSDEDGHGATSSDSDYYLHSVEGEDLSDGLEDDRREE 60

Query: 2819 ALDLNFALDTAFEISDDDLLHNVPKRRKRSSWRNGEGQGHNVQDKQEGDRQTDMNGDIET 2640
            A DLNFAL+ A EI +DDLLHNVP+RRKR+S +N  G  H VQDKQE      +NG+IE 
Sbjct: 61   AWDLNFALEAAVEIGNDDLLHNVPRRRKRNSLKNEGGWSHKVQDKQE----EYINGEIEN 116

Query: 2639 QVFADPVEFDLSGVVXXXXXXXXXXXXXRGDKPILMWEVLEQENERWVAENLELDMDLIN 2460
            +++ +  EF+ + V              R DK +LMWEVLEQENERWVAENLELDMDLIN
Sbjct: 117  EMYGNSEEFNFTDVSEKYERKKKTRKKRR-DKSVLMWEVLEQENERWVAENLELDMDLIN 175

Query: 2459 QNEMVTEIVEPSDDLIIPLLRYQKEWLAWALKQEESSVRGGILADEMGMGKTLQAIALVL 2280
            QNEMV E V+PSDDLIIPLLRYQKEWLAW+LKQEES+VRGGILADEMGMGKTLQAIALVL
Sbjct: 176  QNEMVAETVDPSDDLIIPLLRYQKEWLAWSLKQEESAVRGGILADEMGMGKTLQAIALVL 235

Query: 2279 LKRNISREICGHQLPTSSATFSKELPAIKGTLVICPLVAVMQWVSEIERFTSKGSTKVLV 2100
            LKR+ISR I GHQLP SSA+F+ ELPAIKGTL+ICPLVAVMQWVSEI+RFTSKGSTKVLV
Sbjct: 236  LKRSISRGI-GHQLPPSSASFTNELPAIKGTLIICPLVAVMQWVSEIDRFTSKGSTKVLV 294

Query: 2099 YHGANRAKNLYQFAEYDFVITTYSIVEAEYRKYVMPPKEKCQYCGKLFYDRKLKIHLRYM 1920
            YHGANRAKNLYQF+EYDFVITTYSIVEAEYRKYVMPPKEKCQYCGKLFYDRKLKIHL+Y+
Sbjct: 295  YHGANRAKNLYQFSEYDFVITTYSIVEAEYRKYVMPPKEKCQYCGKLFYDRKLKIHLKYI 354

Query: 1919 CGPGAVRTAKQAKQQRKEPKSKKMSDFEVSTKNAXXXXXXXXXXXXXELENDCPIENSAV 1740
            CGPGAV+TAKQ+KQQRKE K KK+SD EVST                 +END  IENSAV
Sbjct: 355  CGPGAVKTAKQSKQQRKEQKPKKISDIEVSTSTGRNDGKKHGSGNKE-MENDHSIENSAV 413

Query: 1739 DGRVSSAGKSILHSVTWERIILDEAHYIKERRSNTTRAVLTLQSSYKWALSGTPLQNRVG 1560
             GR+SS GKSILHSVTWERIILDEAHYIK+RRSNTTRAVL LQSSYKWALSGTPLQNRVG
Sbjct: 414  VGRLSSEGKSILHSVTWERIILDEAHYIKDRRSNTTRAVLALQSSYKWALSGTPLQNRVG 473

Query: 1559 ELYSLVRFLQIVPYSYYFCKDCDCRTLDYST-AECPGCAHNNVRHFCWWNKHVASPIQDS 1383
            ELYSLVRFLQIVPYSYYFCKDCDCR LDYST AECPGC H NVRHFCWWNK+++SPIQD 
Sbjct: 474  ELYSLVRFLQIVPYSYYFCKDCDCRILDYSTSAECPGCPHRNVRHFCWWNKYISSPIQDF 533

Query: 1382 GNNGCGREAMLVLKHKILRNILLRRTKKGRAADLALPPRIVTMRRDSLDVVEEDYYTALY 1203
            GN G GR+AML+LKHKIL+ I+LRRTKKGRAADLALPPRI  +RRD+LDVVEEDYYTALY
Sbjct: 534  GNTGSGRDAMLLLKHKILKTIVLRRTKKGRAADLALPPRIALLRRDALDVVEEDYYTALY 593

Query: 1202 NESQAQFNTYIEAGTVLNNYAHIFDLLTRLRQAVDHPYLVEYSLTAMERKGKTVDSSKDE 1023
            NESQAQFNTYIEAGTVLNNYAHIFDLLTRLRQAVDHPYLVEYSLT+MERKGKTVD+S DE
Sbjct: 594  NESQAQFNTYIEAGTVLNNYAHIFDLLTRLRQAVDHPYLVEYSLTSMERKGKTVDTSNDE 653

Query: 1022 KCGLCNEPEEDTVVTSCGHVFCKPCLIDFGASMGQNTCPSCSKPLTVDFTTNKDGKEKSS 843
            KC LCN+ EEDTVVTSCGHVFCKPCLIDFGA+MGQN+CPSCSKPLTVDFT  KDGK ++S
Sbjct: 654  KCSLCNDHEEDTVVTSCGHVFCKPCLIDFGATMGQNSCPSCSKPLTVDFTATKDGKRQNS 713

Query: 842  KTTIKGFRPSSILNRIQLDDFQTSTKIDALREEIRGMVERDGSAKGIVFSQFSSFLDLIH 663
            KTTIKGFRPSSILNRIQLDDFQTSTKIDALREEIR MVERDGSAKGIVFSQFSSFLDLIH
Sbjct: 714  KTTIKGFRPSSILNRIQLDDFQTSTKIDALREEIRFMVERDGSAKGIVFSQFSSFLDLIH 773

Query: 662  YALQKSGVNCVQLDGSMSMGARETAIKRFTEDPNCRIFLMSLKAGGVALNLTVASHVFLM 483
            YALQKSGVNCVQLDGSMSMGAR+TAIKRFTEDPNCRIFLMSLKAGGVALNLTVASHVFLM
Sbjct: 774  YALQKSGVNCVQLDGSMSMGARDTAIKRFTEDPNCRIFLMSLKAGGVALNLTVASHVFLM 833

Query: 482  DPWWNPAVERQAQDRIHRIGQFKPIRIVRFVIENTIEERILKLQEKKELVFEGTVGGSSE 303
            DPWWNPAVERQAQDRIHRIGQ+KPIRI+RF+IENTIEERILKLQEKKELVFEGTVGGSSE
Sbjct: 834  DPWWNPAVERQAQDRIHRIGQYKPIRIIRFIIENTIEERILKLQEKKELVFEGTVGGSSE 893

Query: 302  ALSKLSEADLRFLFVT 255
            AL+KL+EADLRFLFVT
Sbjct: 894  ALAKLTEADLRFLFVT 909


>ref|XP_012841446.1| PREDICTED: DNA repair protein RAD16 [Erythranthe guttata]
          Length = 914

 Score = 1448 bits (3748), Expect = 0.0
 Identities = 729/919 (79%), Positives = 796/919 (86%), Gaps = 4/919 (0%)
 Frame = -2

Query: 2999 MKLRSHTPXXXXXXXXXKLKYGESS--DEDGCGA-MSSDSDYNALSDEGEDLLNVLEDNT 2829
            MKLRSHT          KLKY ESS  DED C A MSSDSD+NALSD  EDLLNV E+N 
Sbjct: 1    MKLRSHTSAASSSKGKAKLKYRESSESDEDLCEATMSSDSDFNALSDADEDLLNVTENNR 60

Query: 2828 GEEALDLNFALDTAFEISDDDLLHNVPKRRKRSSWRNGEGQGHNVQDKQEGDRQTDMNGD 2649
             +EALD+++AL  A E SDDDLLHNVPKRRK++  +N  GQ + VQDKQE + + D+N D
Sbjct: 61   EQEALDIDYALGAAIESSDDDLLHNVPKRRKKAPSKNMGGQSYKVQDKQEEEEEADINDD 120

Query: 2648 IETQVFADPVEFDLSGVVXXXXXXXXXXXXXRGDKPILMWEVLEQENERWVAENLELDMD 2469
                +  D +E +L  +              +GD+P+LMWE+LE+ENERWVA+NLE DMD
Sbjct: 121  NIEAIMTDLMECELRRITEEKNVKKKKGRKKKGDRPVLMWEILEEENERWVAQNLEKDMD 180

Query: 2468 LINQNEMVTEIVEPSDDLIIPLLRYQKEWLAWALKQEESSVRGGILADEMGMGKTLQAIA 2289
            L+NQNEMV E VEPSDDLIIPLLRYQKEWLAWALKQEES+V+GGILADEMGMGKTLQAIA
Sbjct: 181  LMNQNEMVAETVEPSDDLIIPLLRYQKEWLAWALKQEESAVKGGILADEMGMGKTLQAIA 240

Query: 2288 LVLLKRNISREICGHQLPTSSATFSKELPAIKGTLVICPLVAVMQWVSEIERFTSKGSTK 2109
            LVL KRNISR I  H LP SSA+ S++L AIKGTLVICPLVAVMQWVSEI+RFTSKGSTK
Sbjct: 241  LVLFKRNISRGISDHHLPASSASSSQQLRAIKGTLVICPLVAVMQWVSEIDRFTSKGSTK 300

Query: 2108 VLVYHGANRAKNLYQFAEYDFVITTYSIVEAEYRKYVMPPKEKCQYCGKLFYDRKLKIHL 1929
            VLVYHG NRAKN Y+F+EYDFVITTYSIVEAEYRKYVMPPK+KCQYCG++FY  KLKIHL
Sbjct: 301  VLVYHGTNRAKNHYKFSEYDFVITTYSIVEAEYRKYVMPPKDKCQYCGRMFYGSKLKIHL 360

Query: 1928 RYMCGPGAVRTAKQAKQQRKEPKSKKMSDFEVSTKNAXXXXXXXXXXXXXELENDCPIEN 1749
            +YMCGPGAVRTAKQ+KQQRKEPK+KK SDFEVST N              E EN+   E 
Sbjct: 361  KYMCGPGAVRTAKQSKQQRKEPKTKKTSDFEVSTSNTGLNDGKDHDSADKETENEFSTEK 420

Query: 1748 SAVDGRVSSAGKSILHSVTWERIILDEAHYIKERRSNTTRAVLTLQSSYKWALSGTPLQN 1569
                  +SS  KSILHS+ WER+ILDEAHYIKERRSNTTRA+  LQSSYKWALSGTPLQN
Sbjct: 421  G-----LSSGAKSILHSLMWERVILDEAHYIKERRSNTTRAIFALQSSYKWALSGTPLQN 475

Query: 1568 RVGELYSLVRFLQIVPYSYYFCKDCDCRTLDYST-AECPGCAHNNVRHFCWWNKHVASPI 1392
            RVGELYSLVRFLQIVPYSYYFCKDCDCRTLDYST AEC GCAH NVRHFCWWNK+++SPI
Sbjct: 476  RVGELYSLVRFLQIVPYSYYFCKDCDCRTLDYSTSAECSGCAHKNVRHFCWWNKYISSPI 535

Query: 1391 QDSGNNGCGREAMLVLKHKILRNILLRRTKKGRAADLALPPRIVTMRRDSLDVVEEDYYT 1212
            QDSGNNG GR AML+LKHKILR+ +LRRTKKGRAADLALPPRIVT+RRDSLDVVEEDYYT
Sbjct: 536  QDSGNNGGGRGAMLLLKHKILRSAVLRRTKKGRAADLALPPRIVTLRRDSLDVVEEDYYT 595

Query: 1211 ALYNESQAQFNTYIEAGTVLNNYAHIFDLLTRLRQAVDHPYLVEYSLTAMERKGKTVDSS 1032
            ALYNESQAQFNTYIEAGTV NNYAHIFDLLTRLRQAVDHPYLVEYSLTAMERKGKTVD+S
Sbjct: 596  ALYNESQAQFNTYIEAGTVSNNYAHIFDLLTRLRQAVDHPYLVEYSLTAMERKGKTVDTS 655

Query: 1031 KDEKCGLCNEPEEDTVVTSCGHVFCKPCLIDFGASMGQNTCPSCSKPLTVDFTTNKDGKE 852
             DEKC +CN+PEEDTVVTSCGHVFCKPCLID GA+MGQN+CPSCSKPLTVDFT+NKD K+
Sbjct: 656  NDEKCSVCNDPEEDTVVTSCGHVFCKPCLIDLGATMGQNSCPSCSKPLTVDFTSNKDVKD 715

Query: 851  KSSKTTIKGFRPSSILNRIQLDDFQTSTKIDALREEIRGMVERDGSAKGIVFSQFSSFLD 672
            + SKTTIKGFRPSSILNRIQ++DFQTSTKIDALREEIR MVERDGSAKGIVFSQFSSFLD
Sbjct: 716  QISKTTIKGFRPSSILNRIQINDFQTSTKIDALREEIRCMVERDGSAKGIVFSQFSSFLD 775

Query: 671  LIHYALQKSGVNCVQLDGSMSMGARETAIKRFTEDPNCRIFLMSLKAGGVALNLTVASHV 492
            LIHYAL KSGV CV+LDGSMSMGAR+ AIKRFTEDP+CRIFLMSLKAGGVALNLTVASHV
Sbjct: 776  LIHYALLKSGVTCVKLDGSMSMGARDVAIKRFTEDPDCRIFLMSLKAGGVALNLTVASHV 835

Query: 491  FLMDPWWNPAVERQAQDRIHRIGQFKPIRIVRFVIENTIEERILKLQEKKELVFEGTVGG 312
            FLMDPWWNPAVERQAQDRIHRIGQ+KPIRIVRF+IENTIEERILKLQEKKELVFEGTVGG
Sbjct: 836  FLMDPWWNPAVERQAQDRIHRIGQYKPIRIVRFIIENTIEERILKLQEKKELVFEGTVGG 895

Query: 311  SSEALSKLSEADLRFLFVT 255
             SEAL+KL+EADLRFLFVT
Sbjct: 896  CSEALAKLTEADLRFLFVT 914


>gb|EYU34010.1| hypothetical protein MIMGU_mgv1a001140mg [Erythranthe guttata]
          Length = 879

 Score = 1428 bits (3697), Expect = 0.0
 Identities = 710/884 (80%), Positives = 777/884 (87%), Gaps = 1/884 (0%)
 Frame = -2

Query: 2903 MSSDSDYNALSDEGEDLLNVLEDNTGEEALDLNFALDTAFEISDDDLLHNVPKRRKRSSW 2724
            MSSDSD+NALSD  EDLLNV E+N  +EALD+++AL  A E SDDDLLHNVPKRRK++  
Sbjct: 1    MSSDSDFNALSDADEDLLNVTENNREQEALDIDYALGAAIESSDDDLLHNVPKRRKKAPS 60

Query: 2723 RNGEGQGHNVQDKQEGDRQTDMNGDIETQVFADPVEFDLSGVVXXXXXXXXXXXXXRGDK 2544
            +N  GQ + VQDKQE + + D+N D    +  D +E +L  +              +GD+
Sbjct: 61   KNMGGQSYKVQDKQEEEEEADINDDNIEAIMTDLMECELRRITEEKNVKKKKGRKKKGDR 120

Query: 2543 PILMWEVLEQENERWVAENLELDMDLINQNEMVTEIVEPSDDLIIPLLRYQKEWLAWALK 2364
            P+LMWE+LE+ENERWVA+NLE DMDL+NQNEMV E VEPSDDLIIPLLRYQKEWLAWALK
Sbjct: 121  PVLMWEILEEENERWVAQNLEKDMDLMNQNEMVAETVEPSDDLIIPLLRYQKEWLAWALK 180

Query: 2363 QEESSVRGGILADEMGMGKTLQAIALVLLKRNISREICGHQLPTSSATFSKELPAIKGTL 2184
            QEES+V+GGILADEMGMGKTLQAIALVL KRNISR I  H LP SSA+ S++L AIKGTL
Sbjct: 181  QEESAVKGGILADEMGMGKTLQAIALVLFKRNISRGISDHHLPASSASSSQQLRAIKGTL 240

Query: 2183 VICPLVAVMQWVSEIERFTSKGSTKVLVYHGANRAKNLYQFAEYDFVITTYSIVEAEYRK 2004
            VICPLVAVMQWVSEI+RFTSKGSTKVLVYHG NRAKN Y+F+EYDFVITTYSIVEAEYRK
Sbjct: 241  VICPLVAVMQWVSEIDRFTSKGSTKVLVYHGTNRAKNHYKFSEYDFVITTYSIVEAEYRK 300

Query: 2003 YVMPPKEKCQYCGKLFYDRKLKIHLRYMCGPGAVRTAKQAKQQRKEPKSKKMSDFEVSTK 1824
            YVMPPK+KCQYCG++FY  KLKIHL+YMCGPGAVRTAKQ+KQQRKEPK+KK SDFEVST 
Sbjct: 301  YVMPPKDKCQYCGRMFYGSKLKIHLKYMCGPGAVRTAKQSKQQRKEPKTKKTSDFEVSTS 360

Query: 1823 NAXXXXXXXXXXXXXELENDCPIENSAVDGRVSSAGKSILHSVTWERIILDEAHYIKERR 1644
            N              E EN+   E       +SS  KSILHS+ WER+ILDEAHYIKERR
Sbjct: 361  NTGLNDGKDHDSADKETENEFSTEKG-----LSSGAKSILHSLMWERVILDEAHYIKERR 415

Query: 1643 SNTTRAVLTLQSSYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYFCKDCDCRTLDYST- 1467
            SNTTRA+  LQSSYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYFCKDCDCRTLDYST 
Sbjct: 416  SNTTRAIFALQSSYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYFCKDCDCRTLDYSTS 475

Query: 1466 AECPGCAHNNVRHFCWWNKHVASPIQDSGNNGCGREAMLVLKHKILRNILLRRTKKGRAA 1287
            AEC GCAH NVRHFCWWNK+++SPIQDSGNNG GR AML+LKHKILR+ +LRRTKKGRAA
Sbjct: 476  AECSGCAHKNVRHFCWWNKYISSPIQDSGNNGGGRGAMLLLKHKILRSAVLRRTKKGRAA 535

Query: 1286 DLALPPRIVTMRRDSLDVVEEDYYTALYNESQAQFNTYIEAGTVLNNYAHIFDLLTRLRQ 1107
            DLALPPRIVT+RRDSLDVVEEDYYTALYNESQAQFNTYIEAGTV NNYAHIFDLLTRLRQ
Sbjct: 536  DLALPPRIVTLRRDSLDVVEEDYYTALYNESQAQFNTYIEAGTVSNNYAHIFDLLTRLRQ 595

Query: 1106 AVDHPYLVEYSLTAMERKGKTVDSSKDEKCGLCNEPEEDTVVTSCGHVFCKPCLIDFGAS 927
            AVDHPYLVEYSLTAMERKGKTVD+S DEKC +CN+PEEDTVVTSCGHVFCKPCLID GA+
Sbjct: 596  AVDHPYLVEYSLTAMERKGKTVDTSNDEKCSVCNDPEEDTVVTSCGHVFCKPCLIDLGAT 655

Query: 926  MGQNTCPSCSKPLTVDFTTNKDGKEKSSKTTIKGFRPSSILNRIQLDDFQTSTKIDALRE 747
            MGQN+CPSCSKPLTVDFT+NKD K++ SKTTIKGFRPSSILNRIQ++DFQTSTKIDALRE
Sbjct: 656  MGQNSCPSCSKPLTVDFTSNKDVKDQISKTTIKGFRPSSILNRIQINDFQTSTKIDALRE 715

Query: 746  EIRGMVERDGSAKGIVFSQFSSFLDLIHYALQKSGVNCVQLDGSMSMGARETAIKRFTED 567
            EIR MVERDGSAKGIVFSQFSSFLDLIHYAL KSGV CV+LDGSMSMGAR+ AIKRFTED
Sbjct: 716  EIRCMVERDGSAKGIVFSQFSSFLDLIHYALLKSGVTCVKLDGSMSMGARDVAIKRFTED 775

Query: 566  PNCRIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVERQAQDRIHRIGQFKPIRIVRFVI 387
            P+CRIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVERQAQDRIHRIGQ+KPIRIVRF+I
Sbjct: 776  PDCRIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVERQAQDRIHRIGQYKPIRIVRFII 835

Query: 386  ENTIEERILKLQEKKELVFEGTVGGSSEALSKLSEADLRFLFVT 255
            ENTIEERILKLQEKKELVFEGTVGG SEAL+KL+EADLRFLFVT
Sbjct: 836  ENTIEERILKLQEKKELVFEGTVGGCSEALAKLTEADLRFLFVT 879


>ref|XP_009627930.1| PREDICTED: DNA repair protein RAD16 [Nicotiana tomentosiformis]
          Length = 916

 Score = 1173 bits (3034), Expect = 0.0
 Identities = 605/934 (64%), Positives = 714/934 (76%), Gaps = 19/934 (2%)
 Frame = -2

Query: 2999 MKLRSHTPXXXXXXXXXKLKYGESSDEDGCGAMSSDSDYNALSDEGEDLLNVLEDNTGEE 2820
            MKLRS  P           +Y +SSDED    MSSDSDY   SDE ED+ N+L ++    
Sbjct: 1    MKLRSF-PSSSSIKGEGSYQYQDSSDEDDFLPMSSDSDYIGSSDEDEDIFNLLRESQTNG 59

Query: 2819 ALDLNFALDTAFEISDDDLLHNVPKRRKRSSWRNGEGQGHNVQDKQEGDRQTD-MNGDIE 2643
             LD +++         +++L N+ KRRK  S R    +    +++Q  +   D M  ++ 
Sbjct: 60   VLDNDYS---------EEVLSNIIKRRKVGSSRKRGSRNIKSKEEQVDEEHVDWMMNEVG 110

Query: 2642 TQVFADPVEFDLSGVVXXXXXXXXXXXXXRGDKPILMWEVLEQENERWVAENLELDMDLI 2463
              V  D     L G +                +P LMWE+ E+EN+RW+AEN   D+DL 
Sbjct: 111  CGVEVDSGYLLLMGRIEDRKKNRDKNKKK---RPTLMWEIWEEENDRWMAENYTNDLDLD 167

Query: 2462 NQNEMVTEIVEPSDDLIIPLLRYQKEWLAWALKQEESSVRGGILADEMGMGKTLQAIALV 2283
             QN +V E  E   DL++PLLRYQKEWLAWALKQEES+ RGG+LADEMGMGKT+QAIALV
Sbjct: 168  CQNGLVNETAETPSDLLMPLLRYQKEWLAWALKQEESTARGGVLADEMGMGKTVQAIALV 227

Query: 2282 LLKRNISREICGHQLPTSSATFSKELPAIKGTLVICPLVAVMQWVSEIERFTSKGSTKVL 2103
            L KR + + I    LP S+   S+ELPA+KGTLVICP+VAV+QWVSEI+RFT+KGS K+L
Sbjct: 228  LAKRELGQAISESSLPPSAPCTSQELPAVKGTLVICPVVAVIQWVSEIDRFTTKGSNKIL 287

Query: 2102 VYHGANRAKNLYQFAEYDFVITTYSIVEAEYRKYVMPPKEKCQYCGKLFYDRKLKIHLRY 1923
            VYHGANR KN+++FAEYDFVITTYS VEAEYRK VMPPKEKCQ+CGK FY++KL +H RY
Sbjct: 288  VYHGANREKNIHKFAEYDFVITTYSTVEAEYRKNVMPPKEKCQWCGKSFYEQKLSVHQRY 347

Query: 1922 MCGPGAVRTAKQAKQQRKE----------------PKSKKMSDFEVSTKNAXXXXXXXXX 1791
             CGP AVRTAKQ+KQ+RK+                 K+K  SD E+ T +          
Sbjct: 348  FCGPDAVRTAKQSKQERKKLKPGGKMSKLKKESIKGKAKTDSDSEIETGSKRGRGKGVKR 407

Query: 1790 XXXXELENDC-PIENSAVDGRVSSAGKSILHSVTWERIILDEAHYIKERRSNTTRAVLTL 1614
                 ++ D   I+++    +     KSILHSV W RIILDEAHY+K+RR NT RA+  L
Sbjct: 408  K----IKTDAGSIDDATGVDQDMITRKSILHSVKWNRIILDEAHYVKDRRCNTARAIFAL 463

Query: 1613 QSSYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYFCKDCDCRTLDYSTAECPGCAHNNV 1434
            +SSYKWALSGTPLQNRVGELYSLVRFLQ++PYSYYFCKDCDCR LDYS+ +CP C H +V
Sbjct: 464  ESSYKWALSGTPLQNRVGELYSLVRFLQMIPYSYYFCKDCDCRVLDYSSTDCPHCPHKSV 523

Query: 1433 RHFCWWNKHVASPIQDSGNNGCGREAMLVLKHKILRNILLRRTKKGRAADLALPPRIVTM 1254
            RHFCWWNK++ASPIQ  GN G GR+AM++LKHKIL++ILLRRTKKGRAADLALPPRIVT+
Sbjct: 524  RHFCWWNKYIASPIQSQGNRGTGRDAMVLLKHKILKSILLRRTKKGRAADLALPPRIVTL 583

Query: 1253 RRDSLDVVEEDYYTALYNESQAQFNTYIEAGTVLNNYAHIFDLLTRLRQAVDHPYLVEYS 1074
            R+DSLDV EEDYYT+LYNESQAQFNTYI+AGT++NNYAHIFDLLTRLRQAVDHPYLV YS
Sbjct: 584  RKDSLDVKEEDYYTSLYNESQAQFNTYIQAGTLMNNYAHIFDLLTRLRQAVDHPYLVVYS 643

Query: 1073 LTAMERKGKTVDSS-KDEKCGLCNEPEEDTVVTSCGHVFCKPCLIDFGASMGQNTCPSCS 897
             TA+ R G T DS   ++ CGLC++P ED VV SC HVFCK CLIDF AS+GQ +CPSCS
Sbjct: 644  STALARSGNTDDSGYAEQPCGLCHDPVEDPVVASCTHVFCKSCLIDFSASVGQVSCPSCS 703

Query: 896  KPLTVDFTTNKDGKEKSSKTTIKGFRPSSILNRIQLDDFQTSTKIDALREEIRGMVERDG 717
            KPLTVDFT N+ G +K +K  +KGFR SSILNRI+L+DFQTSTKIDALREEIR MVERDG
Sbjct: 704  KPLTVDFTANEKGDQK-TKPHVKGFRSSSILNRIRLNDFQTSTKIDALREEIRFMVERDG 762

Query: 716  SAKGIVFSQFSSFLDLIHYALQKSGVNCVQLDGSMSMGARETAIKRFTEDPNCRIFLMSL 537
            SAK IVFSQF+SFLDLIHY+LQKSG++CVQL GSMS+ AR++AI RFTEDP+CRIFLMSL
Sbjct: 763  SAKAIVFSQFTSFLDLIHYSLQKSGISCVQLVGSMSITARDSAITRFTEDPDCRIFLMSL 822

Query: 536  KAGGVALNLTVASHVFLMDPWWNPAVERQAQDRIHRIGQFKPIRIVRFVIENTIEERILK 357
            KAGGVALNLTVASHVFLMDPWWNPAVE+QAQDRIHRIGQ+KPIRIVRFVIENTIEERILK
Sbjct: 823  KAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQYKPIRIVRFVIENTIEERILK 882

Query: 356  LQEKKELVFEGTVGGSSEALSKLSEADLRFLFVT 255
            LQEKKELVFEGTVGGSSEAL KL+EADL+FLFVT
Sbjct: 883  LQEKKELVFEGTVGGSSEALGKLTEADLKFLFVT 916


>ref|XP_009795276.1| PREDICTED: DNA repair protein RAD16 isoform X2 [Nicotiana sylvestris]
          Length = 916

 Score = 1169 bits (3024), Expect = 0.0
 Identities = 606/933 (64%), Positives = 710/933 (76%), Gaps = 18/933 (1%)
 Frame = -2

Query: 2999 MKLRSHTPXXXXXXXXXKLKYGESSDEDGCGAMSSDSDYNALSDEGEDLLNVLEDNTGEE 2820
            MKLRS  P           +Y +SSDEDG   MSSDSDY   SDE ED+ N+L       
Sbjct: 1    MKLRSFRPSSSIKGEGNY-QYQDSSDEDGFLPMSSDSDYIGSSDEDEDIFNLLRVAQTNG 59

Query: 2819 ALDLNFALDTAFEISDDDLLHNVPKRRKRSSWRNGEGQGHNVQDKQEGDRQTD-MNGDIE 2643
             LD +F+         +++L N+ KRRK  S R    +     ++Q  +   D M  ++ 
Sbjct: 60   VLDNDFS---------EEVLSNIIKRRKVGSSRKRGSKNIKSNEEQVEEEHVDRMMNEVG 110

Query: 2642 TQVFADPVEFDLSGVVXXXXXXXXXXXXXRGDKPILMWEVLEQENERWVAENLELDMDLI 2463
              V  D     L G +                +P LMWE+ E+EN+RW+AEN   D+DL 
Sbjct: 111  CGVEVDSGYRLLMGRIEDRKKNRDKNKKK---RPTLMWEIWEEENDRWMAENYTNDLDLD 167

Query: 2462 NQNEMVTEIVEPSDDLIIPLLRYQKEWLAWALKQEESSVRGGILADEMGMGKTLQAIALV 2283
             QN +V +  E   DL++PLLRYQKEWLAWALKQEES+ RGGILADEMGMGKT+QAIALV
Sbjct: 168  CQNGLVNDTAETPSDLLMPLLRYQKEWLAWALKQEESTARGGILADEMGMGKTVQAIALV 227

Query: 2282 LLKRNISREICGHQLPTSSATFSKELPAIKGTLVICPLVAVMQWVSEIERFTSKGSTKVL 2103
            L KR + + I    L +S+   S+ELPA+KGTLVICP+VAV+QWVSEI+RFT+KGS K+L
Sbjct: 228  LAKRELGQAISESSLLSSAPCTSQELPAVKGTLVICPVVAVIQWVSEIDRFTTKGSNKIL 287

Query: 2102 VYHGANRAKNLYQFAEYDFVITTYSIVEAEYRKYVMPPKEKCQYCGKLFYDRKLKIHLRY 1923
            VYHGANR KN+++FAEYDFVITTYS VEAEYRK VMPPKEKCQ+CGK FY++KL +H RY
Sbjct: 288  VYHGANREKNIHKFAEYDFVITTYSTVEAEYRKNVMPPKEKCQWCGKSFYEQKLSVHQRY 347

Query: 1922 MCGPGAVRTAKQAKQQRKEPK----------------SKKMSDFEVSTKNAXXXXXXXXX 1791
             CGP AVRTAKQ KQ+RK+ K                +K  SD E+ T +          
Sbjct: 348  FCGPDAVRTAKQLKQERKKSKPGGKTSKLKKESIKGKAKTDSDSEIETGSKRGRGKGVKR 407

Query: 1790 XXXXELENDCPIENSAVDGRVSSAGKSILHSVTWERIILDEAHYIKERRSNTTRAVLTLQ 1611
                +  +   I+++A   +     KSILHSV W RIILDEAHY+K+RR NTTRA+  L+
Sbjct: 408  KIKTDASS---IDDAAGVDQDMITRKSILHSVKWNRIILDEAHYVKDRRCNTTRAIFALE 464

Query: 1610 SSYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYFCKDCDCRTLDYSTAECPGCAHNNVR 1431
            SSYKWALSGTPLQNRVGELYSLVRFLQ++PYSYYFCKDCDCR LDYS  +CP C H +VR
Sbjct: 465  SSYKWALSGTPLQNRVGELYSLVRFLQMIPYSYYFCKDCDCRVLDYSPTDCPHCPHKSVR 524

Query: 1430 HFCWWNKHVASPIQDSGNNGCGREAMLVLKHKILRNILLRRTKKGRAADLALPPRIVTMR 1251
            HFCWWNK++ASPIQ  GN G GR+AM++LKHKIL++ILLRRTKKGRAADLALPPRIVT+R
Sbjct: 525  HFCWWNKYIASPIQSQGNRGTGRDAMVLLKHKILKSILLRRTKKGRAADLALPPRIVTLR 584

Query: 1250 RDSLDVVEEDYYTALYNESQAQFNTYIEAGTVLNNYAHIFDLLTRLRQAVDHPYLVEYSL 1071
            +DSLDV EEDYYT+LYNESQAQFNTYI+AGT++NNYAHIFDLLTRLRQAVDHPYLV YS 
Sbjct: 585  KDSLDVKEEDYYTSLYNESQAQFNTYIQAGTLMNNYAHIFDLLTRLRQAVDHPYLVVYSS 644

Query: 1070 TAMERKGKTVDSS-KDEKCGLCNEPEEDTVVTSCGHVFCKPCLIDFGASMGQNTCPSCSK 894
            TA+ R G T DS   ++ CGLC++P ED VV SC HVFCK CLIDF A++GQ +CPSCSK
Sbjct: 645  TALARSGNTDDSGYVEQPCGLCHDPVEDPVVASCTHVFCKSCLIDFSATVGQVSCPSCSK 704

Query: 893  PLTVDFTTNKDGKEKSSKTTIKGFRPSSILNRIQLDDFQTSTKIDALREEIRGMVERDGS 714
            PL VDFT N  G +K +K T+KGFR SSILNRI+L+DFQTSTKIDALREEIR MVERDGS
Sbjct: 705  PLAVDFTANDKGDQK-TKPTVKGFRSSSILNRIRLNDFQTSTKIDALREEIRFMVERDGS 763

Query: 713  AKGIVFSQFSSFLDLIHYALQKSGVNCVQLDGSMSMGARETAIKRFTEDPNCRIFLMSLK 534
            AK IVFSQF+SFLDLIHY+LQKSG++CVQL GSMS+ AR++AI RFTEDP+CRIFLMSLK
Sbjct: 764  AKAIVFSQFTSFLDLIHYSLQKSGISCVQLVGSMSITARDSAITRFTEDPDCRIFLMSLK 823

Query: 533  AGGVALNLTVASHVFLMDPWWNPAVERQAQDRIHRIGQFKPIRIVRFVIENTIEERILKL 354
            AGGVALNLTVASHVFLMDPWWNPAVE+QAQDRIHRIGQ+KPIRIVRFVIENTIEERILKL
Sbjct: 824  AGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQYKPIRIVRFVIENTIEERILKL 883

Query: 353  QEKKELVFEGTVGGSSEALSKLSEADLRFLFVT 255
            QEKKELVFEGTVGGSSEAL KL+EADL+FLFVT
Sbjct: 884  QEKKELVFEGTVGGSSEALGKLTEADLKFLFVT 916


>ref|XP_009795273.1| PREDICTED: DNA repair protein RAD16 isoform X1 [Nicotiana sylvestris]
            gi|698498778|ref|XP_009795275.1| PREDICTED: DNA repair
            protein RAD16 isoform X1 [Nicotiana sylvestris]
          Length = 926

 Score = 1161 bits (3003), Expect = 0.0
 Identities = 606/943 (64%), Positives = 710/943 (75%), Gaps = 28/943 (2%)
 Frame = -2

Query: 2999 MKLRSHTPXXXXXXXXXKLKYGESSDED----------GCGAMSSDSDYNALSDEGEDLL 2850
            MKLRS  P           +Y +SSDED          G   MSSDSDY   SDE ED+ 
Sbjct: 1    MKLRSFRPSSSIKGEGNY-QYQDSSDEDSSSKKEDNEDGFLPMSSDSDYIGSSDEDEDIF 59

Query: 2849 NVLEDNTGEEALDLNFALDTAFEISDDDLLHNVPKRRKRSSWRNGEGQGHNVQDKQEGDR 2670
            N+L        LD +F+         +++L N+ KRRK  S R    +     ++Q  + 
Sbjct: 60   NLLRVAQTNGVLDNDFS---------EEVLSNIIKRRKVGSSRKRGSKNIKSNEEQVEEE 110

Query: 2669 QTD-MNGDIETQVFADPVEFDLSGVVXXXXXXXXXXXXXRGDKPILMWEVLEQENERWVA 2493
              D M  ++   V  D     L G +                +P LMWE+ E+EN+RW+A
Sbjct: 111  HVDRMMNEVGCGVEVDSGYRLLMGRIEDRKKNRDKNKKK---RPTLMWEIWEEENDRWMA 167

Query: 2492 ENLELDMDLINQNEMVTEIVEPSDDLIIPLLRYQKEWLAWALKQEESSVRGGILADEMGM 2313
            EN   D+DL  QN +V +  E   DL++PLLRYQKEWLAWALKQEES+ RGGILADEMGM
Sbjct: 168  ENYTNDLDLDCQNGLVNDTAETPSDLLMPLLRYQKEWLAWALKQEESTARGGILADEMGM 227

Query: 2312 GKTLQAIALVLLKRNISREICGHQLPTSSATFSKELPAIKGTLVICPLVAVMQWVSEIER 2133
            GKT+QAIALVL KR + + I    L +S+   S+ELPA+KGTLVICP+VAV+QWVSEI+R
Sbjct: 228  GKTVQAIALVLAKRELGQAISESSLLSSAPCTSQELPAVKGTLVICPVVAVIQWVSEIDR 287

Query: 2132 FTSKGSTKVLVYHGANRAKNLYQFAEYDFVITTYSIVEAEYRKYVMPPKEKCQYCGKLFY 1953
            FT+KGS K+LVYHGANR KN+++FAEYDFVITTYS VEAEYRK VMPPKEKCQ+CGK FY
Sbjct: 288  FTTKGSNKILVYHGANREKNIHKFAEYDFVITTYSTVEAEYRKNVMPPKEKCQWCGKSFY 347

Query: 1952 DRKLKIHLRYMCGPGAVRTAKQAKQQRKEPK----------------SKKMSDFEVSTKN 1821
            ++KL +H RY CGP AVRTAKQ KQ+RK+ K                +K  SD E+ T +
Sbjct: 348  EQKLSVHQRYFCGPDAVRTAKQLKQERKKSKPGGKTSKLKKESIKGKAKTDSDSEIETGS 407

Query: 1820 AXXXXXXXXXXXXXELENDCPIENSAVDGRVSSAGKSILHSVTWERIILDEAHYIKERRS 1641
                          +  +   I+++A   +     KSILHSV W RIILDEAHY+K+RR 
Sbjct: 408  KRGRGKGVKRKIKTDASS---IDDAAGVDQDMITRKSILHSVKWNRIILDEAHYVKDRRC 464

Query: 1640 NTTRAVLTLQSSYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYFCKDCDCRTLDYSTAE 1461
            NTTRA+  L+SSYKWALSGTPLQNRVGELYSLVRFLQ++PYSYYFCKDCDCR LDYS  +
Sbjct: 465  NTTRAIFALESSYKWALSGTPLQNRVGELYSLVRFLQMIPYSYYFCKDCDCRVLDYSPTD 524

Query: 1460 CPGCAHNNVRHFCWWNKHVASPIQDSGNNGCGREAMLVLKHKILRNILLRRTKKGRAADL 1281
            CP C H +VRHFCWWNK++ASPIQ  GN G GR+AM++LKHKIL++ILLRRTKKGRAADL
Sbjct: 525  CPHCPHKSVRHFCWWNKYIASPIQSQGNRGTGRDAMVLLKHKILKSILLRRTKKGRAADL 584

Query: 1280 ALPPRIVTMRRDSLDVVEEDYYTALYNESQAQFNTYIEAGTVLNNYAHIFDLLTRLRQAV 1101
            ALPPRIVT+R+DSLDV EEDYYT+LYNESQAQFNTYI+AGT++NNYAHIFDLLTRLRQAV
Sbjct: 585  ALPPRIVTLRKDSLDVKEEDYYTSLYNESQAQFNTYIQAGTLMNNYAHIFDLLTRLRQAV 644

Query: 1100 DHPYLVEYSLTAMERKGKTVDSS-KDEKCGLCNEPEEDTVVTSCGHVFCKPCLIDFGASM 924
            DHPYLV YS TA+ R G T DS   ++ CGLC++P ED VV SC HVFCK CLIDF A++
Sbjct: 645  DHPYLVVYSSTALARSGNTDDSGYVEQPCGLCHDPVEDPVVASCTHVFCKSCLIDFSATV 704

Query: 923  GQNTCPSCSKPLTVDFTTNKDGKEKSSKTTIKGFRPSSILNRIQLDDFQTSTKIDALREE 744
            GQ +CPSCSKPL VDFT N  G +K +K T+KGFR SSILNRI+L+DFQTSTKIDALREE
Sbjct: 705  GQVSCPSCSKPLAVDFTANDKGDQK-TKPTVKGFRSSSILNRIRLNDFQTSTKIDALREE 763

Query: 743  IRGMVERDGSAKGIVFSQFSSFLDLIHYALQKSGVNCVQLDGSMSMGARETAIKRFTEDP 564
            IR MVERDGSAK IVFSQF+SFLDLIHY+LQKSG++CVQL GSMS+ AR++AI RFTEDP
Sbjct: 764  IRFMVERDGSAKAIVFSQFTSFLDLIHYSLQKSGISCVQLVGSMSITARDSAITRFTEDP 823

Query: 563  NCRIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVERQAQDRIHRIGQFKPIRIVRFVIE 384
            +CRIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVE+QAQDRIHRIGQ+KPIRIVRFVIE
Sbjct: 824  DCRIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQYKPIRIVRFVIE 883

Query: 383  NTIEERILKLQEKKELVFEGTVGGSSEALSKLSEADLRFLFVT 255
            NTIEERILKLQEKKELVFEGTVGGSSEAL KL+EADL+FLFVT
Sbjct: 884  NTIEERILKLQEKKELVFEGTVGGSSEALGKLTEADLKFLFVT 926


>ref|XP_015076825.1| PREDICTED: DNA repair protein RAD16-like [Solanum pennellii]
          Length = 889

 Score = 1159 bits (2997), Expect = 0.0
 Identities = 594/919 (64%), Positives = 706/919 (76%), Gaps = 4/919 (0%)
 Frame = -2

Query: 2999 MKLRSHTPXXXXXXXXXKLKYGESSDEDGCGAMSSDSDYNALSDEGEDLLNVLEDNTGEE 2820
            MKLRS  P         + +Y +SSDED   +MSSDSDY   SDE          +  +E
Sbjct: 1    MKLRSR-PSSSSAKGKQRRQYQDSSDEDYLLSMSSDSDYIGSSDE----------DVADE 49

Query: 2819 ALDLNFALDTAFEISDDDLLHNVPKRRKRSSWRNGEGQGHNVQDKQEGDRQTDMNGDIET 2640
             ++L            ++++++  K+R R   +    + H  +++       ++ G  E 
Sbjct: 50   VVNLT-----------EEVVYSNRKKRNRGKKKIETEEDHGEEEENVDWVMNEVGGGGE- 97

Query: 2639 QVFADPVEFDLSGVVXXXXXXXXXXXXXRGDKPILMWEVLEQENERWVAENLELDMDLIN 2460
                  V+     ++             +  +P L+WE+ E+EN+ W+AEN   D D  +
Sbjct: 98   ------VDAGYLQLIGRIEDRKKIRVKNQKKRPTLLWEIWEEENDSWMAENYPNDPDFNS 151

Query: 2459 QNEMVTEIVEPSDDLIIPLLRYQKEWLAWALKQEESSVRGGILADEMGMGKTLQAIALVL 2280
            Q+E+VTE  +P  DLI+PLLRYQKEWL WALKQEES+ RGGILADEMGMGKT+QAIALVL
Sbjct: 152  QDELVTETAQPPSDLIMPLLRYQKEWLTWALKQEESTARGGILADEMGMGKTVQAIALVL 211

Query: 2279 LKRNISREICGHQLPTSSATFSKELPAIKGTLVICPLVAVMQWVSEIERFTSKGSTKVLV 2100
             KR + + I G  L + +   S++LP +KGTLVICP+VAV+QWVSEI+RFT+KGS K+LV
Sbjct: 212  AKRELGQAISGSSLLSPAPCTSQQLPVVKGTLVICPVVAVIQWVSEIDRFTTKGSNKILV 271

Query: 2099 YHGANRAKNLYQFAEYDFVITTYSIVEAEYRKYVMPPKEKCQYCGKLFYDRKLKIHLRYM 1920
            YHG NR KN+ +FAEYDFVITTYS VEAEYRK VMPPKEKCQ+CGK FY++KL +H +Y 
Sbjct: 272  YHGTNRVKNIDKFAEYDFVITTYSTVEAEYRKNVMPPKEKCQWCGKSFYEQKLSVHQKYF 331

Query: 1919 CGPGAVRTAKQAKQQRK---EPKSKKMSDFEVSTKNAXXXXXXXXXXXXXELENDCPIEN 1749
            CGP AV+TAKQ+KQQ K   +P   K    E  +K                  +   +++
Sbjct: 332  CGPDAVKTAKQSKQQSKPGGKPSKLKKDHIEGDSKVDTGKRGSGKGIKRKSETDAGSVDD 391

Query: 1748 SAVDGRVSSAGKSILHSVTWERIILDEAHYIKERRSNTTRAVLTLQSSYKWALSGTPLQN 1569
            SA  G+  S  KSILHSV W RIILDEAHY+K+RRSNTTRA+L L+SSYKWALSGTPLQN
Sbjct: 392  SACAGQDMSMRKSILHSVKWNRIILDEAHYVKDRRSNTTRAILALESSYKWALSGTPLQN 451

Query: 1568 RVGELYSLVRFLQIVPYSYYFCKDCDCRTLDYSTAECPGCAHNNVRHFCWWNKHVASPIQ 1389
            RVGELYSLVRFLQIVPYSYYFCKDCDCR LDYS++ECP C H ++RHFCWWN+++ASPIQ
Sbjct: 452  RVGELYSLVRFLQIVPYSYYFCKDCDCRVLDYSSSECPHCPHKSIRHFCWWNRYIASPIQ 511

Query: 1388 DSGNNGCGREAMLVLKHKILRNILLRRTKKGRAADLALPPRIVTMRRDSLDVVEEDYYTA 1209
            + GN G GR+AM++LKHKIL++ILLRRTKKGRAADLALPPRIVT+R+DSLDV EEDYYT+
Sbjct: 512  NQGNRGTGRDAMVLLKHKILKSILLRRTKKGRAADLALPPRIVTLRKDSLDVKEEDYYTS 571

Query: 1208 LYNESQAQFNTYIEAGTVLNNYAHIFDLLTRLRQAVDHPYLVEYSLTAMERKGKTVDS-S 1032
            LYNESQAQFNTYI+AGT++NNYAHIFDLLTRLRQAVDHPYLV YS TA+ R+G T D+ S
Sbjct: 572  LYNESQAQFNTYIQAGTLMNNYAHIFDLLTRLRQAVDHPYLVVYSSTALARRGSTNDAGS 631

Query: 1031 KDEKCGLCNEPEEDTVVTSCGHVFCKPCLIDFGASMGQNTCPSCSKPLTVDFTTNKDGKE 852
             ++ CGLC++P ED VVTSC HVFCK CLIDF AS+GQ +CPSCSKPLTVDFT N  G +
Sbjct: 632  VEQLCGLCHDPVEDPVVTSCTHVFCKSCLIDFSASVGQVSCPSCSKPLTVDFTANDKGDQ 691

Query: 851  KSSKTTIKGFRPSSILNRIQLDDFQTSTKIDALREEIRGMVERDGSAKGIVFSQFSSFLD 672
            K SK TIKGFR SSILNRI LD+FQTSTKI+ALREEIR M+E DGSAK IVFSQF+SFLD
Sbjct: 692  K-SKATIKGFRSSSILNRIHLDNFQTSTKIEALREEIRFMIEIDGSAKAIVFSQFTSFLD 750

Query: 671  LIHYALQKSGVNCVQLDGSMSMGARETAIKRFTEDPNCRIFLMSLKAGGVALNLTVASHV 492
            LIHY+LQKSGV+CVQLDGSMSM AR++AI RFTEDP+CRIFLMSLKAGGVALNLTVAS V
Sbjct: 751  LIHYSLQKSGVSCVQLDGSMSMTARDSAITRFTEDPDCRIFLMSLKAGGVALNLTVASQV 810

Query: 491  FLMDPWWNPAVERQAQDRIHRIGQFKPIRIVRFVIENTIEERILKLQEKKELVFEGTVGG 312
            FLMDPWWNPAVERQAQDRIHRIGQ+KPIRIVRFVIENTIEERILKLQEKKELVFEGTVGG
Sbjct: 811  FLMDPWWNPAVERQAQDRIHRIGQYKPIRIVRFVIENTIEERILKLQEKKELVFEGTVGG 870

Query: 311  SSEALSKLSEADLRFLFVT 255
            SSEAL KL+EADL+FLFVT
Sbjct: 871  SSEALGKLTEADLKFLFVT 889


>ref|XP_006342255.1| PREDICTED: DNA repair protein RAD16-like [Solanum tuberosum]
          Length = 892

 Score = 1154 bits (2986), Expect = 0.0
 Identities = 597/919 (64%), Positives = 705/919 (76%), Gaps = 4/919 (0%)
 Frame = -2

Query: 2999 MKLRSHTPXXXXXXXXXKLKYGESSDEDGCGAMSSDSDYNALSDEGEDLLNVLEDNTGEE 2820
            M+LRS  P           +Y +SSDED   ++SSDSDY   +DE               
Sbjct: 1    MRLRSR-PSSSSAKGKQSRQYQDSSDEDDLLSISSDSDYIGNNDED-------------- 45

Query: 2819 ALDLNFALDTAFEISDDDLLHNVPKRRKRSSWRNGEGQGHNVQDKQEGDRQTDMNGDIET 2640
                    D A E+  D+L+  V    +    RNG G+      + +G+ +  ++  +  
Sbjct: 46   ------VADEADEV--DNLIEEVLCSIRTK--RNG-GKKRIETKEDQGEEEEHVDWVMNE 94

Query: 2639 QVFADPVEFDLSGVVXXXXXXXXXXXXXRGDKPILMWEVLEQENERWVAENLELDMDLIN 2460
                  V+     ++             +  +P L+WE+ E+EN+ W+A N   D D  +
Sbjct: 95   VGRGGEVDAGYLQLIERIEDRKKIREKNQKKRPTLLWEIWEEENDSWMAVNYPNDPDFNS 154

Query: 2459 QNEMVTEIVEPSDDLIIPLLRYQKEWLAWALKQEESSVRGGILADEMGMGKTLQAIALVL 2280
            Q+E+VTE  +P  DLI+PLLRYQKEWLAWALKQEES+ RGGILADEMGMGKT+QAIALVL
Sbjct: 155  QDELVTETAQPPSDLIMPLLRYQKEWLAWALKQEESTARGGILADEMGMGKTVQAIALVL 214

Query: 2279 LKRNISREICGHQLPTSSATFSKELPAIKGTLVICPLVAVMQWVSEIERFTSKGSTKVLV 2100
             KR + + I G  L + +   S+ELPA+KGTLVICP+VAV+QWVSEI+RFT+KGS K+LV
Sbjct: 215  AKRELGQVISGSSLLSPAPCTSQELPAVKGTLVICPVVAVIQWVSEIDRFTTKGSNKILV 274

Query: 2099 YHGANRAKNLYQFAEYDFVITTYSIVEAEYRKYVMPPKEKCQYCGKLFYDRKLKIHLRYM 1920
            YHGANR KN+ +FAEYDFVITTYS VEAEYRK VMPPKEKCQ+CGK FY++KL +H +Y 
Sbjct: 275  YHGANRVKNIDKFAEYDFVITTYSTVEAEYRKNVMPPKEKCQWCGKSFYEQKLSVHQKYF 334

Query: 1919 CGPGAVRTAKQAKQQRK---EPKSKKMSDFEVSTKNAXXXXXXXXXXXXXELENDCPIEN 1749
            CGP AV+TAKQ+KQQ K   +P   K +  E  ++                  +   +++
Sbjct: 335  CGPDAVKTAKQSKQQSKTGGKPSKLKKNPIEGDSEIDTGKRGRGKGIKRKSETDAGSVDD 394

Query: 1748 SAVDGRVSSAGKSILHSVTWERIILDEAHYIKERRSNTTRAVLTLQSSYKWALSGTPLQN 1569
            SA  G+  S  KSILHSV W RIILDEAHY+K+RRSNTTRA+L L+SSYKWALSGTPLQN
Sbjct: 395  SACAGQDMSMRKSILHSVKWNRIILDEAHYVKDRRSNTTRAILALESSYKWALSGTPLQN 454

Query: 1568 RVGELYSLVRFLQIVPYSYYFCKDCDCRTLDYSTAECPGCAHNNVRHFCWWNKHVASPIQ 1389
            RVGELYSLVRFLQIVPYSYYFCKDCDCR LDYS++ECP C H  +RHFCWWN+++ASPIQ
Sbjct: 455  RVGELYSLVRFLQIVPYSYYFCKDCDCRVLDYSSSECPHCPHKPIRHFCWWNRYIASPIQ 514

Query: 1388 DSGNNGCGREAMLVLKHKILRNILLRRTKKGRAADLALPPRIVTMRRDSLDVVEEDYYTA 1209
              GN+G GR+AM++LKHKIL++ILLRRTKKGRAADLALPPRIVT+R+DSLDV EEDYYT+
Sbjct: 515  SQGNHGTGRDAMVLLKHKILKSILLRRTKKGRAADLALPPRIVTLRKDSLDVKEEDYYTS 574

Query: 1208 LYNESQAQFNTYIEAGTVLNNYAHIFDLLTRLRQAVDHPYLVEYSLTAMERKGKTVDS-S 1032
            LYNESQAQFNTYI+AGT++NNYAHIFDLLTRLRQAVDHPYLV YS TA+ R+  T D+ S
Sbjct: 575  LYNESQAQFNTYIQAGTLMNNYAHIFDLLTRLRQAVDHPYLVVYSSTALARRESTNDAGS 634

Query: 1031 KDEKCGLCNEPEEDTVVTSCGHVFCKPCLIDFGASMGQNTCPSCSKPLTVDFTTNKDGKE 852
             ++ CGLC++P ED VVTSC HVFCK CLIDF AS+GQ +CPSCSKPLTVDFT N  G +
Sbjct: 635  VEQPCGLCHDPVEDPVVTSCTHVFCKSCLIDFSASVGQVSCPSCSKPLTVDFTANDKGDQ 694

Query: 851  KSSKTTIKGFRPSSILNRIQLDDFQTSTKIDALREEIRGMVERDGSAKGIVFSQFSSFLD 672
            K SK TIKGFR SSILNRI LDDFQTSTKI+ALREEIR M+ERDGSAK IVFSQF+SFLD
Sbjct: 695  K-SKATIKGFRSSSILNRIHLDDFQTSTKIEALREEIRFMIERDGSAKAIVFSQFTSFLD 753

Query: 671  LIHYALQKSGVNCVQLDGSMSMGARETAIKRFTEDPNCRIFLMSLKAGGVALNLTVASHV 492
            LIHY+LQKSGV+CVQLDGSMSM AR++AI+RFTEDP+CRIFLMSLKAGGVALNLTVAS V
Sbjct: 754  LIHYSLQKSGVSCVQLDGSMSMTARDSAIRRFTEDPDCRIFLMSLKAGGVALNLTVASQV 813

Query: 491  FLMDPWWNPAVERQAQDRIHRIGQFKPIRIVRFVIENTIEERILKLQEKKELVFEGTVGG 312
            FLMDPWWNPAVERQAQDRIHRIGQ+KPIRIVRFVIENTIEERILKLQEKKELVFEGTVGG
Sbjct: 814  FLMDPWWNPAVERQAQDRIHRIGQYKPIRIVRFVIENTIEERILKLQEKKELVFEGTVGG 873

Query: 311  SSEALSKLSEADLRFLFVT 255
            SSEAL KL+EADL+FLFVT
Sbjct: 874  SSEALGKLTEADLKFLFVT 892


>ref|XP_004240150.1| PREDICTED: DNA repair protein RAD16-like [Solanum lycopersicum]
          Length = 889

 Score = 1150 bits (2976), Expect = 0.0
 Identities = 592/920 (64%), Positives = 707/920 (76%), Gaps = 5/920 (0%)
 Frame = -2

Query: 2999 MKLRSHTPXXXXXXXXXKLKYGESSDEDGCGAMSSDSDYNALSDEGEDLLNVLEDNTGEE 2820
            MKLRS  P         + +Y +SSDED   +MSSDSDY   SDE          +  +E
Sbjct: 1    MKLRSR-PSSSSAKGKQRRQYQDSSDEDYLLSMSSDSDYIGSSDE----------DVADE 49

Query: 2819 ALDLNFALDTAFEISDDDLLHNVPKRRKRSSWRNGEGQGHNVQDKQEGDRQTDMNGDIET 2640
             ++L            ++++++  ++R R   +    + H  +++       ++ G  E 
Sbjct: 50   VVNLT-----------EEVVYSNRRKRNRGKKKIETKEDHGEEEENVDWVMNEVGGGGE- 97

Query: 2639 QVFADPVEFDLSGVVXXXXXXXXXXXXXRGDKPILMWEVLEQENERWVAENLELDMDLIN 2460
                  V+     ++             +  +P L+WE+ E+EN+ W+AEN   D    +
Sbjct: 98   ------VDAGYLQLIGRIEDRKKIRVKNQKKRPTLLWEIWEEENDSWMAENYPNDPHFNS 151

Query: 2459 QNEMVTEIVEPSDDLIIPLLRYQKEWLAWALKQEESSVRGGILADEMGMGKTLQAIALVL 2280
            Q+E+VTE  +P  DLI+PLLRYQKEWL WALKQEES+ RGGILADEMGMGKT+QAIALVL
Sbjct: 152  QDELVTETAQPPSDLIMPLLRYQKEWLTWALKQEESTARGGILADEMGMGKTVQAIALVL 211

Query: 2279 LKRNISREICGHQLPTSSATFSKELPAIKGTLVICPLVAVMQWVSEIERFTSKGSTKVLV 2100
             KR I + I G  L + +   S++LP +KG+LVICP+VAV+QWVSEI+RFT+KGS K+LV
Sbjct: 212  AKREIGQAISGSSLLSPAPCTSQQLPVMKGSLVICPVVAVIQWVSEIDRFTTKGSNKILV 271

Query: 2099 YHGANRAKNLYQFAEYDFVITTYSIVEAEYRKYVMPPKEKCQYCGKLFYDRKLKIHLRYM 1920
            YHG NR KN+ +FAEYDFVITTYS VEAEYRK VMPPKEKCQ+CGK FY++KL +H +Y 
Sbjct: 272  YHGTNRVKNIDKFAEYDFVITTYSTVEAEYRKNVMPPKEKCQWCGKSFYEQKLSVHQKYF 331

Query: 1919 CGPGAVRTAKQAKQQRK---EPKSKKMSDFEVSTK-NAXXXXXXXXXXXXXELENDCPIE 1752
            CGP AV+TAKQ+KQQ K   +P   K    E  +K N              E +  C ++
Sbjct: 332  CGPDAVKTAKQSKQQSKPGGKPSKLKKDHIEGDSKINTGKRGSGKGIKRKSEADAGC-VD 390

Query: 1751 NSAVDGRVSSAGKSILHSVTWERIILDEAHYIKERRSNTTRAVLTLQSSYKWALSGTPLQ 1572
            + A  G+  S  KSILHSV W RIILDEAHY+K+RRSNTTRA+L L+SSYKWALSGTPLQ
Sbjct: 391  DLAFAGQDMSTRKSILHSVKWNRIILDEAHYVKDRRSNTTRAILALESSYKWALSGTPLQ 450

Query: 1571 NRVGELYSLVRFLQIVPYSYYFCKDCDCRTLDYSTAECPGCAHNNVRHFCWWNKHVASPI 1392
            NRVGELYSLVRFLQIVPYSYYFCKDCDCR LDYS++ECP C H ++RHFCWWN+++ASPI
Sbjct: 451  NRVGELYSLVRFLQIVPYSYYFCKDCDCRVLDYSSSECPHCPHKSIRHFCWWNRYIASPI 510

Query: 1391 QDSGNNGCGREAMLVLKHKILRNILLRRTKKGRAADLALPPRIVTMRRDSLDVVEEDYYT 1212
            Q+ GN G GR+AM++LKHKIL++ILLRRTKKGRAADLALPPRIVT+R+DSLDV EEDYYT
Sbjct: 511  QNQGNRGTGRDAMVLLKHKILKSILLRRTKKGRAADLALPPRIVTLRKDSLDVKEEDYYT 570

Query: 1211 ALYNESQAQFNTYIEAGTVLNNYAHIFDLLTRLRQAVDHPYLVEYSLTAMERKGKTVDS- 1035
            +LYNESQAQFNTYI+AGT++NNYAHIFDLLTRLRQAVDHPYLV YS TA+ R+G T D+ 
Sbjct: 571  SLYNESQAQFNTYIQAGTLMNNYAHIFDLLTRLRQAVDHPYLVVYSSTALARRGSTNDAG 630

Query: 1034 SKDEKCGLCNEPEEDTVVTSCGHVFCKPCLIDFGASMGQNTCPSCSKPLTVDFTTNKDGK 855
            S ++ CGLC++P ED VVTSC H+FCK CLIDF AS+GQ +CPSCS+PLTVDFT N  G 
Sbjct: 631  SVEQLCGLCHDPVEDPVVTSCTHIFCKSCLIDFSASVGQVSCPSCSEPLTVDFTANDKGD 690

Query: 854  EKSSKTTIKGFRPSSILNRIQLDDFQTSTKIDALREEIRGMVERDGSAKGIVFSQFSSFL 675
            +K SK TIKGFR SSILNRI LD+FQTSTKI+ALREEIR M+E DGSAK IVFSQF+SFL
Sbjct: 691  QK-SKATIKGFRSSSILNRIHLDNFQTSTKIEALREEIRFMIEIDGSAKAIVFSQFTSFL 749

Query: 674  DLIHYALQKSGVNCVQLDGSMSMGARETAIKRFTEDPNCRIFLMSLKAGGVALNLTVASH 495
            DLIHY+LQKSGV+CVQLDGSMSM AR++AI RFTEDP+CRIFLMSLKAGGVALNLTVAS 
Sbjct: 750  DLIHYSLQKSGVSCVQLDGSMSMTARDSAITRFTEDPDCRIFLMSLKAGGVALNLTVASQ 809

Query: 494  VFLMDPWWNPAVERQAQDRIHRIGQFKPIRIVRFVIENTIEERILKLQEKKELVFEGTVG 315
            VFLMDPWWNPAVERQAQDRIHRIGQ+KPIRIVRFVIENTIEERILKLQEKKELVFEGTVG
Sbjct: 810  VFLMDPWWNPAVERQAQDRIHRIGQYKPIRIVRFVIENTIEERILKLQEKKELVFEGTVG 869

Query: 314  GSSEALSKLSEADLRFLFVT 255
            GSSEAL KL+EADL+FLFVT
Sbjct: 870  GSSEALGKLTEADLKFLFVT 889


>ref|XP_010657210.1| PREDICTED: DNA repair protein RAD16 [Vitis vinifera]
          Length = 936

 Score = 1139 bits (2947), Expect = 0.0
 Identities = 593/939 (63%), Positives = 701/939 (74%), Gaps = 24/939 (2%)
 Frame = -2

Query: 2999 MKLRSHTPXXXXXXXXXKLKYGESSDEDGCGAMSSDSDYNALSDEGEDLLNVLEDNTGEE 2820
            M+LRS             ++  E SDE+      SDSD N +   GE   + +E++    
Sbjct: 1    MELRSRRILSGASFEGNGVQLSEGSDEE---YRVSDSDCNGIICAGEGSSSTIEESKERV 57

Query: 2819 ALDLNFALDTAFEISDDD-----------LLHNVPKRRKRSSWR-NGEGQGHNVQDKQEG 2676
              DLN   +     S+ D               V KR+KR   R   E      ++K+ G
Sbjct: 58   VFDLNIEANDMDRGSEGDESGDFDSSGLVKRRKVGKRKKRGRQRCKREEMRGEEKEKELG 117

Query: 2675 DRQTDMNGDIETQVFADPVEFDLSGVVXXXXXXXXXXXXXRGD-KPILMWEVLEQENERW 2499
            + Q     + E  +  D +   L  V               GD KP LMWE+ E+E+++W
Sbjct: 118  NVQDSEVQEDEGVLEIDFLGLQLGRVGHLGSKKNDKKRKKSGDLKPTLMWEIWEEEHDKW 177

Query: 2498 VAENLELDMDLINQNEMVTEIVEPSDDLIIPLLRYQKEWLAWALKQEESSVRGGILADEM 2319
            +  NL  D+DL +QNE+V+E  +   DLI+PLLRYQKEWLAWALKQEES+ RGGILADEM
Sbjct: 178  IDMNLTEDVDLDHQNELVSETADAPSDLIMPLLRYQKEWLAWALKQEESTTRGGILADEM 237

Query: 2318 GMGKTLQAIALVLLKRNISREICGHQLPTSSATFSKELPAIKGTLVICPLVAVMQWVSEI 2139
            GMGKT+QAIALVL KR IS++IC  ++   +   S +LP IKGTLVICP+VAV+QWV+EI
Sbjct: 238  GMGKTIQAIALVLSKREISQKICEPKVVLRAPGSSMDLPKIKGTLVICPVVAVLQWVNEI 297

Query: 2138 ERFTSKGSTKVLVYHGANRAKNLYQFAEYDFVITTYSIVEAEYRKYVMPPKEKCQYCGKL 1959
             RFT KGSTKVLVYHGANR K++ QF+EYDFVITTYSIVEAEYRK VMPPK+KC +C KL
Sbjct: 298  GRFTVKGSTKVLVYHGANRGKSIGQFSEYDFVITTYSIVEAEYRKNVMPPKQKCVFCRKL 357

Query: 1958 FYDRKLKIHLRYMCGPGAVRTAKQAKQQRKEPKSKKMSDFEVSTKNAXXXXXXXXXXXXX 1779
            FY  K+ IHLRY CGP A++T KQ+KQ++KEPK +      V                  
Sbjct: 358  FYPHKMSIHLRYFCGPDAIKTDKQSKQKKKEPKLELKISDSVEDNGGECEGEKRKKDQPK 417

Query: 1778 ELENDCP---------IENSAVDGRVSSAGKSILHSVTWERIILDEAHYIKERRSNTTRA 1626
              +N  P         IENSAVD + +S  KSILHSV W+RIILDEAH+IK+RRSNT +A
Sbjct: 418  PRKNYKPKKHMGFGPSIENSAVDEQSTSTRKSILHSVKWDRIILDEAHFIKDRRSNTAKA 477

Query: 1625 VLTLQSSYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYFCKDCDCRTLDYSTA-ECPGC 1449
            VL L+S YKWALSGTPLQNRVGELYSL+RFL+I+PYSYY CKDCDCRTLDYS++ ECP C
Sbjct: 478  VLALESEYKWALSGTPLQNRVGELYSLIRFLRIIPYSYYLCKDCDCRTLDYSSSTECPNC 537

Query: 1448 AHNNVRHFCWWNKHVASPIQDSGNNGCGREAMLVLKHKILRNILLRRTKKGRAADLALPP 1269
             H +VRHFCWWNK+VA+PIQ  GN G G+ AM++LKHKIL++ILLRRTKKGRAADLALPP
Sbjct: 538  EHKSVRHFCWWNKYVATPIQAMGNIGEGQRAMILLKHKILKSILLRRTKKGRAADLALPP 597

Query: 1268 RIVTMRRDSLDVVEEDYYTALYNESQAQFNTYIEAGTVLNNYAHIFDLLTRLRQAVDHPY 1089
            RIV++RRD+LD+ EEDYY +LYNESQAQFNTY+EAGT++NNYAHIFDLLTRLRQAVDHPY
Sbjct: 598  RIVSLRRDTLDIKEEDYYQSLYNESQAQFNTYVEAGTLMNNYAHIFDLLTRLRQAVDHPY 657

Query: 1088 LVEYSLTAMERKGKTVDSSKDEK-CGLCNEPEEDTVVTSCGHVFCKPCLIDFGASMGQNT 912
            LV YS T+  R G  VD+   E+ CG+CN+P ED VVTSC HVFCK CL DF  ++GQ +
Sbjct: 658  LVVYSRTSTLRAGNIVDTENGEQVCGICNDPLEDPVVTSCAHVFCKACLNDFSTTLGQVS 717

Query: 911  CPSCSKPLTVDFTTNKDGKEKSSKTTIKGFRPSSILNRIQLDDFQTSTKIDALREEIRGM 732
            CPSCSKPLTVD TT+ D  ++  KTTIKGF+PSSILNRI+LDDFQTSTKIDALREEIR M
Sbjct: 718  CPSCSKPLTVDLTTSMDPGDRDMKTTIKGFKPSSILNRIRLDDFQTSTKIDALREEIRFM 777

Query: 731  VERDGSAKGIVFSQFSSFLDLIHYALQKSGVNCVQLDGSMSMGARETAIKRFTEDPNCRI 552
            VERDGSAKGIVFSQF+SFLDLI+Y+LQKSG+ CVQL GSMSM AR+ AI RFT +P+C+I
Sbjct: 778  VERDGSAKGIVFSQFTSFLDLINYSLQKSGITCVQLVGSMSMAARDAAISRFTNEPDCKI 837

Query: 551  FLMSLKAGGVALNLTVASHVFLMDPWWNPAVERQAQDRIHRIGQFKPIRIVRFVIENTIE 372
            FLMSLKAGGVALNLTVASHVFLMDPWWNPAVERQAQDRIHRIGQ+KPIRIVRFVIE TIE
Sbjct: 838  FLMSLKAGGVALNLTVASHVFLMDPWWNPAVERQAQDRIHRIGQYKPIRIVRFVIEKTIE 897

Query: 371  ERILKLQEKKELVFEGTVGGSSEALSKLSEADLRFLFVT 255
            ERILKLQEKKELVFEGTVGGSSEAL KL+EADL+FLF+T
Sbjct: 898  ERILKLQEKKELVFEGTVGGSSEALGKLTEADLKFLFIT 936


>ref|XP_015055166.1| PREDICTED: DNA repair protein RAD16-like [Solanum pennellii]
          Length = 889

 Score = 1125 bits (2909), Expect = 0.0
 Identities = 581/919 (63%), Positives = 697/919 (75%), Gaps = 4/919 (0%)
 Frame = -2

Query: 2999 MKLRSHTPXXXXXXXXXKLKYGESSDEDGCGAMSSDSDYNALSDEGEDLLNVLEDNTGEE 2820
            MKLRS  P           +Y +SSDED   ++ SDS+YN +SDE          +  +E
Sbjct: 1    MKLRSR-PSSSPAEGKQSRQYQDSSDEDDLLSIPSDSEYNVISDE----------DVADE 49

Query: 2819 ALDLNFALDTAFEISDDDLLHNVPKRRKRSSWRNGEGQGHNVQDKQEGDRQTDMNGDIET 2640
             ++LN          ++ +  N  KR        G+ +    +D+ E +   D+   +  
Sbjct: 50   VVNLN----------EEVVCSNRTKRN------GGKKRIETKEDQGEEEEHVDLV--LNE 91

Query: 2639 QVFADPVEFDLSGVVXXXXXXXXXXXXXRGDKPILMWEVLEQENERWVAENLELDMDLIN 2460
                  V+     ++             +  +PIL+WE+ E+EN+ W+AEN   D DL  
Sbjct: 92   VGGGGEVDAGYLQLIGRIEDRKKIREKNQKKRPILLWEIWEEENDSWMAENYPNDPDLNI 151

Query: 2459 QNEMVTEIVEPSDDLIIPLLRYQKEWLAWALKQEESSVRGGILADEMGMGKTLQAIALVL 2280
            Q+E+VTE  +P  D I+PLLRYQKEWL+WALKQEES+ RGGILADEMGMGKT QAIALVL
Sbjct: 152  QDELVTETAQPPSDFIMPLLRYQKEWLSWALKQEESNARGGILADEMGMGKTAQAIALVL 211

Query: 2279 LKRNISREICGHQLPTSSATFSKELPAIKGTLVICPLVAVMQWVSEIERFTSKGSTKVLV 2100
             +R +++ I    L +S+   S+EL A+KGTLVICP+VAV+QWVSEI+RFT+KGS KVLV
Sbjct: 212  ARRELAQAISDSSLLSSAPCSSQELLAVKGTLVICPVVAVIQWVSEIDRFTAKGSNKVLV 271

Query: 2099 YHGANRAKNLYQFAEYDFVITTYSIVEAEYRKYVMPPKEKCQYCGKLFYDRKLKIHLRYM 1920
            YHGANR KN+ +FAEY+FVITTYS VEAEYRK V+PPKEKCQ+CGK FY++KL  H +Y 
Sbjct: 272  YHGANREKNIDKFAEYEFVITTYSTVEAEYRKNVLPPKEKCQWCGKSFYEQKLPFHQKYY 331

Query: 1919 CGPGAVRTAKQAKQQRK---EPKSKKMSDFEVSTKNAXXXXXXXXXXXXXELENDCPIEN 1749
            CGP AV+T KQ+KQQ K   +P   K +  E  ++                  +   +++
Sbjct: 332  CGPHAVKTDKQSKQQSKPGGKPSKLKKNPIEGDSEIDTGKGGRGKGIKRKSDTDAGSVDD 391

Query: 1748 SAVDGRVSSAGKSILHSVTWERIILDEAHYIKERRSNTTRAVLTLQSSYKWALSGTPLQN 1569
            SA   +  S  KS+LH V W RIILDEAHY+K+RRSNTT+A+L L+SSYKWALSGTPLQN
Sbjct: 392  SACASQDMSPRKSVLHCVKWNRIILDEAHYVKDRRSNTTKAILALESSYKWALSGTPLQN 451

Query: 1568 RVGELYSLVRFLQIVPYSYYFCKDCDCRTLDYSTAECPGCAHNNVRHFCWWNKHVASPIQ 1389
            RVGELYSLVRFLQI+PYSYYFCKDCDCR LDYS+++CP C H  VRHFCWWN+++ASPIQ
Sbjct: 452  RVGELYSLVRFLQILPYSYYFCKDCDCRVLDYSSSDCPHCPHKPVRHFCWWNRYIASPIQ 511

Query: 1388 DSGNNGCGREAMLVLKHKILRNILLRRTKKGRAADLALPPRIVTMRRDSLDVVEEDYYTA 1209
              GN G G++AM++LKHKIL++ILLRRTKKGRAADLALPPRIVT+R+DSLDV EEDYYT+
Sbjct: 512  SQGNYGTGKDAMVLLKHKILKSILLRRTKKGRAADLALPPRIVTLRKDSLDVKEEDYYTS 571

Query: 1208 LYNESQAQFNTYIEAGTVLNNYAHIFDLLTRLRQAVDHPYLVEYSLTAMERKGKTVDS-S 1032
            LYNESQAQFNTYI+AGT++NNYAHIFDLLTRLRQAVDHPYLV YS  A+ R+  T D+ S
Sbjct: 572  LYNESQAQFNTYIQAGTLMNNYAHIFDLLTRLRQAVDHPYLVVYSSVALARRESTNDAGS 631

Query: 1031 KDEKCGLCNEPEEDTVVTSCGHVFCKPCLIDFGASMGQNTCPSCSKPLTVDFTTNKDGKE 852
             ++ CGLC++P ED VVTSC HVFCK CLIDF AS+GQ +CPSC+K LTVDFT N  G +
Sbjct: 632  VEQPCGLCHDPVEDPVVTSCTHVFCKSCLIDFSASVGQVSCPSCAKTLTVDFTANDKGDQ 691

Query: 851  KSSKTTIKGFRPSSILNRIQLDDFQTSTKIDALREEIRGMVERDGSAKGIVFSQFSSFLD 672
            K SK TIKGFR SSILNRI LD+FQTSTKI+ALREEIR M+ERDGSAK IVFSQF+SFLD
Sbjct: 692  K-SKATIKGFRSSSILNRIHLDNFQTSTKIEALREEIRFMIERDGSAKAIVFSQFTSFLD 750

Query: 671  LIHYALQKSGVNCVQLDGSMSMGARETAIKRFTEDPNCRIFLMSLKAGGVALNLTVASHV 492
            LIHYALQKSGV CVQLDGSMSM AR++AI RFTEDP+CRIFLMSLKAGGVALNLTVAS V
Sbjct: 751  LIHYALQKSGVGCVQLDGSMSMTARDSAITRFTEDPDCRIFLMSLKAGGVALNLTVASQV 810

Query: 491  FLMDPWWNPAVERQAQDRIHRIGQFKPIRIVRFVIENTIEERILKLQEKKELVFEGTVGG 312
            FLMDPWWNPAVE+QAQDRIHRIGQ+KPIRIVRFVIENT+EERILKLQ+KKELVFEGTVGG
Sbjct: 811  FLMDPWWNPAVEQQAQDRIHRIGQYKPIRIVRFVIENTVEERILKLQQKKELVFEGTVGG 870

Query: 311  SSEALSKLSEADLRFLFVT 255
            SS AL KL+EADL+FLFVT
Sbjct: 871  SSAALGKLTEADLKFLFVT 889


>emb|CBI28814.3| unnamed protein product [Vitis vinifera]
          Length = 964

 Score = 1122 bits (2903), Expect = 0.0
 Identities = 588/933 (63%), Positives = 694/933 (74%), Gaps = 16/933 (1%)
 Frame = -2

Query: 3005 QTMKLRSHTPXXXXXXXXXKLKYGESSDEDGCGAMSSDSDYNALSDEGEDLLNVLEDNTG 2826
            ++M+LRS             ++  E SDE+      SDSD N +   GE   + +E++  
Sbjct: 69   RSMELRSRRILSGASFEGNGVQLSEGSDEE---YRVSDSDCNGIICAGEGSSSTIEESKE 125

Query: 2825 EEALDLNFALDTAFEISDDD-----------LLHNVPKRRKRSSWR-NGEGQGHNVQDKQ 2682
                DLN   +     S+ D               V KR+KR   R   E      ++K+
Sbjct: 126  RVVFDLNIEANDMDRGSEGDESGDFDSSGLVKRRKVGKRKKRGRQRCKREEMRGEEKEKE 185

Query: 2681 EGDRQTDMNGDIETQVFADPVEFDLSGVVXXXXXXXXXXXXXRGD-KPILMWEVLEQENE 2505
             G+ Q     + E  +  D +   L  V               GD KP LMWE+ E+E++
Sbjct: 186  LGNVQDSEVQEDEGVLEIDFLGLQLGRVGHLGSKKNDKKRKKSGDLKPTLMWEIWEEEHD 245

Query: 2504 RWVAENLELDMDLINQNEMVTEIVEPSDDLIIPLLRYQKEWLAWALKQEESSVRGGILAD 2325
            +W+  NL  D+DL +QNE+V+E  +   DLI+PLLRYQKEWLAWALKQEES+ RGGILAD
Sbjct: 246  KWIDMNLTEDVDLDHQNELVSETADAPSDLIMPLLRYQKEWLAWALKQEESTTRGGILAD 305

Query: 2324 EMGMGKTLQAIALVLLKRNISREICGHQLPTSSATFSKELPAIKGTLVICPLVAVMQWVS 2145
            EMGMGKT+QAIALVL KR IS++IC                    TLVICP+VAV+QWV+
Sbjct: 306  EMGMGKTIQAIALVLSKREISQKIC--------------------TLVICPVVAVLQWVN 345

Query: 2144 EIERFTSKGSTKVLVYHGANRAKNLYQFAEYDFVITTYSIVEAEYRKYVMPPKEKCQYCG 1965
            EI RFT KGSTKVLVYHGANR K++ QF+EYDFVITTYSIVEAEYRK VMPPK+KC +C 
Sbjct: 346  EIGRFTVKGSTKVLVYHGANRGKSIGQFSEYDFVITTYSIVEAEYRKNVMPPKQKCVFCR 405

Query: 1964 KLFYDRKLKIHLRYMCGPGAVRTAKQAKQQRKEPKSK-KMSDFEVSTKNAXXXXXXXXXX 1788
            KLFY  K+ IHLRY CGP A++T KQ+KQ++KEPK + K+SD     K            
Sbjct: 406  KLFYPHKMSIHLRYFCGPDAIKTDKQSKQKKKEPKLELKISDSNYKPKKHMGFGPS---- 461

Query: 1787 XXXELENDCPIENSAVDGRVSSAGKSILHSVTWERIILDEAHYIKERRSNTTRAVLTLQS 1608
                      IENSAVD + +S  KSILHSV W+RIILDEAH+IK+RRSNT +AVL L+S
Sbjct: 462  ----------IENSAVDEQSTSTRKSILHSVKWDRIILDEAHFIKDRRSNTAKAVLALES 511

Query: 1607 SYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYFCKDCDCRTLDYSTA-ECPGCAHNNVR 1431
             YKWALSGTPLQNRVGELYSL+RFL+I+PYSYY CKDCDCRTLDYS++ ECP C H +VR
Sbjct: 512  EYKWALSGTPLQNRVGELYSLIRFLRIIPYSYYLCKDCDCRTLDYSSSTECPNCEHKSVR 571

Query: 1430 HFCWWNKHVASPIQDSGNNGCGREAMLVLKHKILRNILLRRTKKGRAADLALPPRIVTMR 1251
            HFCWWNK+VA+PIQ  GN G G+ AM++LKHKIL++ILLRRTKKGRAADLALPPRIV++R
Sbjct: 572  HFCWWNKYVATPIQAMGNIGEGQRAMILLKHKILKSILLRRTKKGRAADLALPPRIVSLR 631

Query: 1250 RDSLDVVEEDYYTALYNESQAQFNTYIEAGTVLNNYAHIFDLLTRLRQAVDHPYLVEYSL 1071
            RD+LD+ EEDYY +LYNESQAQFNTY+EAGT++NNYAHIFDLLTRLRQAVDHPYLV YS 
Sbjct: 632  RDTLDIKEEDYYQSLYNESQAQFNTYVEAGTLMNNYAHIFDLLTRLRQAVDHPYLVVYSR 691

Query: 1070 TAMERKGKTVDSSKDEK-CGLCNEPEEDTVVTSCGHVFCKPCLIDFGASMGQNTCPSCSK 894
            T+  R G  VD+   E+ CG+CN+P ED VVTSC HVFCK CL DF  ++GQ +CPSCSK
Sbjct: 692  TSTLRAGNIVDTENGEQVCGICNDPLEDPVVTSCAHVFCKACLNDFSTTLGQVSCPSCSK 751

Query: 893  PLTVDFTTNKDGKEKSSKTTIKGFRPSSILNRIQLDDFQTSTKIDALREEIRGMVERDGS 714
            PLTVD TT+ D  ++  KTTIKGF+PSSILNRI+LDDFQTSTKIDALREEIR MVERDGS
Sbjct: 752  PLTVDLTTSMDPGDRDMKTTIKGFKPSSILNRIRLDDFQTSTKIDALREEIRFMVERDGS 811

Query: 713  AKGIVFSQFSSFLDLIHYALQKSGVNCVQLDGSMSMGARETAIKRFTEDPNCRIFLMSLK 534
            AKGIVFSQF+SFLDLI+Y+LQKSG+ CVQL GSMSM AR+ AI RFT +P+C+IFLMSLK
Sbjct: 812  AKGIVFSQFTSFLDLINYSLQKSGITCVQLVGSMSMAARDAAISRFTNEPDCKIFLMSLK 871

Query: 533  AGGVALNLTVASHVFLMDPWWNPAVERQAQDRIHRIGQFKPIRIVRFVIENTIEERILKL 354
            AGGVALNLTVASHVFLMDPWWNPAVERQAQDRIHRIGQ+KPIRIVRFVIE TIEERILKL
Sbjct: 872  AGGVALNLTVASHVFLMDPWWNPAVERQAQDRIHRIGQYKPIRIVRFVIEKTIEERILKL 931

Query: 353  QEKKELVFEGTVGGSSEALSKLSEADLRFLFVT 255
            QEKKELVFEGTVGGSSEAL KL+EADL+FLF+T
Sbjct: 932  QEKKELVFEGTVGGSSEALGKLTEADLKFLFIT 964


>ref|XP_004248914.1| PREDICTED: DNA repair protein RAD16-like [Solanum lycopersicum]
          Length = 889

 Score = 1120 bits (2897), Expect = 0.0
 Identities = 577/920 (62%), Positives = 687/920 (74%), Gaps = 5/920 (0%)
 Frame = -2

Query: 2999 MKLRSHTPXXXXXXXXXKLKYGESSDEDGCGAMSSDSDYNALSDEGEDLLNVLEDNTGEE 2820
            MKLRS  P           +Y +SSDED   ++ SDS+YN +SDE               
Sbjct: 1    MKLRSR-PSSSPAEGKQSRQYQDSSDEDDLLSIPSDSEYNVISDED-------------- 45

Query: 2819 ALDLNFALDTAFEISDDDLLHNVPKRRKRSSW-RNGEGQGHNVQDKQEGDRQTDMNGDIE 2643
                    D    ++++ +  N  KR     W    E QG   +       +    G+++
Sbjct: 46   ------VADEVVNLTEEVVCFNRTKRNGGKKWIETKEDQGEEEEHVDLVLNEVGGGGEVD 99

Query: 2642 TQVFADPVEFDLSGVVXXXXXXXXXXXXXRGDKPILMWEVLEQENERWVAENLELDMDLI 2463
                          ++             +  +PIL+WE+ E+EN+ W+AEN   D DL 
Sbjct: 100  AGYLQ---------LIGRIEDRKKIREKNQKKRPILLWEIWEEENDSWMAENYPNDPDLN 150

Query: 2462 NQNEMVTEIVEPSDDLIIPLLRYQKEWLAWALKQEESSVRGGILADEMGMGKTLQAIALV 2283
             Q+E+VTE  +P  D I+PLLRYQKEWLAWALKQEES+ RGGILADEMGMGKT QAIALV
Sbjct: 151  IQDELVTETAQPPSDFIMPLLRYQKEWLAWALKQEESNARGGILADEMGMGKTAQAIALV 210

Query: 2282 LLKRNISREICGHQLPTSSATFSKELPAIKGTLVICPLVAVMQWVSEIERFTSKGSTKVL 2103
            L +R +++ I    L +S+   S+EL A+KGTLVICP+VAV+QWVSEI+RFT+KGS KVL
Sbjct: 211  LARRELAQAISDSSLLSSAPCSSQELLAVKGTLVICPVVAVIQWVSEIDRFTAKGSNKVL 270

Query: 2102 VYHGANRAKNLYQFAEYDFVITTYSIVEAEYRKYVMPPKEKCQYCGKLFYDRKLKIHLRY 1923
            VYHGANR KN+ +FAEY+FVITTYS VEAEYRK V+PPKEKCQ+CGK FY++KL  H +Y
Sbjct: 271  VYHGANREKNIDKFAEYEFVITTYSTVEAEYRKNVLPPKEKCQWCGKSFYEQKLPFHQKY 330

Query: 1922 MCGPGAVRTAKQAKQQRK---EPKSKKMSDFEVSTKNAXXXXXXXXXXXXXELENDCPIE 1752
             CGP AV+T KQ+KQQ     +P   K +  E  ++                  +   ++
Sbjct: 331  YCGPHAVKTDKQSKQQSNPGGKPSKLKKNPIEGDSEIDTGKGGRGKGIKRKSDTDAGSVD 390

Query: 1751 NSAVDGRVSSAGKSILHSVTWERIILDEAHYIKERRSNTTRAVLTLQSSYKWALSGTPLQ 1572
            +SA   +  S  KS+LH V W RIILDEAHY+K+RRSNTT+A+L L+SSYKWALSGTPLQ
Sbjct: 391  DSACASQDMSPRKSVLHCVKWNRIILDEAHYVKDRRSNTTKAILALESSYKWALSGTPLQ 450

Query: 1571 NRVGELYSLVRFLQIVPYSYYFCKDCDCRTLDYSTAECPGCAHNNVRHFCWWNKHVASPI 1392
            NRVGELYSLVRFLQI+PYSYYFCKDCDCR LDYS+++CP C H  VRHFCWWN+++ASPI
Sbjct: 451  NRVGELYSLVRFLQILPYSYYFCKDCDCRVLDYSSSDCPHCPHKPVRHFCWWNRYIASPI 510

Query: 1391 QDSGNNGCGREAMLVLKHKILRNILLRRTKKGRAADLALPPRIVTMRRDSLDVVEEDYYT 1212
            Q  GN G G++AM++LKHKIL++ILLRRTKKGRAADLALPPRIVT+R+DSLDV EEDYYT
Sbjct: 511  QSQGNYGTGKDAMVLLKHKILKSILLRRTKKGRAADLALPPRIVTLRKDSLDVKEEDYYT 570

Query: 1211 ALYNESQAQFNTYIEAGTVLNNYAHIFDLLTRLRQAVDHPYLVEYSLTAMERKGKTVDS- 1035
            +LYNESQAQFN YI+AGT++NNYAHIFDLLTRLRQAVDHPYLV YS  A+ R+  T D+ 
Sbjct: 571  SLYNESQAQFNIYIQAGTLMNNYAHIFDLLTRLRQAVDHPYLVVYSSVALARRESTNDAG 630

Query: 1034 SKDEKCGLCNEPEEDTVVTSCGHVFCKPCLIDFGASMGQNTCPSCSKPLTVDFTTNKDGK 855
            S ++ CGLC++P ED VVTSC HVFCK CLIDF AS+GQ +CPSC+K LTV+FT N  G 
Sbjct: 631  SVEQPCGLCHDPVEDPVVTSCTHVFCKSCLIDFSASVGQVSCPSCAKTLTVEFTANDKGD 690

Query: 854  EKSSKTTIKGFRPSSILNRIQLDDFQTSTKIDALREEIRGMVERDGSAKGIVFSQFSSFL 675
             K SK TIKGFR SSILNRI LD+FQTSTKI+ALREEIR M+ERDGSAK IVFSQF+SFL
Sbjct: 691  HK-SKATIKGFRSSSILNRIHLDNFQTSTKIEALREEIRFMIERDGSAKAIVFSQFTSFL 749

Query: 674  DLIHYALQKSGVNCVQLDGSMSMGARETAIKRFTEDPNCRIFLMSLKAGGVALNLTVASH 495
            DLIHYALQKSGV CVQLDGSMSM AR++AI RFTEDP+CRIFLMSLKAGGVALNLTVAS 
Sbjct: 750  DLIHYALQKSGVGCVQLDGSMSMTARDSAITRFTEDPDCRIFLMSLKAGGVALNLTVASQ 809

Query: 494  VFLMDPWWNPAVERQAQDRIHRIGQFKPIRIVRFVIENTIEERILKLQEKKELVFEGTVG 315
            VFLMDPWWNPAVE+QAQDRIHRIGQ+KPIRIVRFVIENT+EERILKLQ+KKELVFEGTVG
Sbjct: 810  VFLMDPWWNPAVEQQAQDRIHRIGQYKPIRIVRFVIENTVEERILKLQQKKELVFEGTVG 869

Query: 314  GSSEALSKLSEADLRFLFVT 255
            GSS AL KL+EADL+FLFVT
Sbjct: 870  GSSAALGKLTEADLKFLFVT 889


>ref|XP_007046386.1| Helicase protein with RING/U-box domain isoform 2 [Theobroma cacao]
            gi|590701383|ref|XP_007046388.1| Helicase protein with
            RING/U-box domain isoform 2 [Theobroma cacao]
            gi|508710321|gb|EOY02218.1| Helicase protein with
            RING/U-box domain isoform 2 [Theobroma cacao]
            gi|508710323|gb|EOY02220.1| Helicase protein with
            RING/U-box domain isoform 2 [Theobroma cacao]
          Length = 836

 Score = 1114 bits (2882), Expect = 0.0
 Identities = 555/775 (71%), Positives = 642/775 (82%), Gaps = 12/775 (1%)
 Frame = -2

Query: 2543 PILMWEVLEQENERWVAENLELDMDLINQNEMVTEIVEPSDDLIIPLLRYQKEWLAWALK 2364
            P+LMWEV EQE+E+W+ ENL  D+DL  QN ++TE  E S DLIIPLLRYQKEWLAWALK
Sbjct: 65   PLLMWEVWEQEHEKWIDENLTADVDLDQQNAVITETSEASPDLIIPLLRYQKEWLAWALK 124

Query: 2363 QEESSVRGGILADEMGMGKTLQAIALVLLKRNISREIC---GHQLPTSSATFSKELPAIK 2193
            QE+S+ +GGILADEMGMGKT+QAIALVL KR + R I    G  L  SS+T   +LP I+
Sbjct: 125  QEDSATKGGILADEMGMGKTIQAIALVLAKRELLRTIAEPNGSSLTPSSST---DLPMIR 181

Query: 2192 GTLVICPLVAVMQWVSEIERFTSKGSTKVLVYHGANRAKNLYQFAEYDFVITTYSIVEAE 2013
            GTLVICP+VAV QWVSEI+RFTS+GSTKVLVYHG NR KN+ QF +YDFVITTYSIVEAE
Sbjct: 182  GTLVICPVVAVSQWVSEIDRFTSRGSTKVLVYHGTNRGKNIKQFLDYDFVITTYSIVEAE 241

Query: 2012 YRKYVMPPKEKCQYCGKLFYDRKLKIHLRYMCGPGAVRTAKQAKQQRKEPKSKKMSDFEV 1833
            YRKY+MPPKEKC YCGK FY +KL +HL+Y CGP AV+T KQ+KQ+RK+ KS   SD E 
Sbjct: 242  YRKYMMPPKEKCPYCGKSFYQKKLSVHLKYYCGPDAVKTEKQSKQERKKSKSVFKSDREH 301

Query: 1832 STKNAXXXXXXXXXXXXXELENDCPIENSAVDGRVS-----SAGKSILHSVTWERIILDE 1668
            ++                  E D  ++    D           GKS+LHSV WERIILDE
Sbjct: 302  TSNYETDMRKGAGKKKSKHNEEDKDLDFEFDDTFAGVEHSLPQGKSLLHSVKWERIILDE 361

Query: 1667 AHYIKERRSNTTRAVLTLQSSYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYFCKDCDC 1488
            AH++K+RR NT +AVLTL+S YKWALSGTPLQNRVGELYSLVRFLQIVPYSYY CKDCDC
Sbjct: 362  AHFVKDRRCNTAKAVLTLESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDC 421

Query: 1487 RTLDYSTA-ECPGCAHNNVRHFCWWNKHVASPIQDSGNNGCGREAMLVLKHKILRNILLR 1311
            RTLDYS++ +C  C HN+VRHFCWWNK+VA+PIQ  GN   G+ AM++LKHKIL+NI+LR
Sbjct: 422  RTLDYSSSTQCSNCPHNSVRHFCWWNKYVATPIQQCGNGEIGKRAMILLKHKILKNIVLR 481

Query: 1310 RTKKGRAADLALPPRIVTMRRDSLDVVEEDYYTALYNESQAQFNTYIEAGTVLNNYAHIF 1131
            RTKKGRAADLALPPRIV++RRD++D+ E DYY +LY+ESQAQFNTY++AGTV+NNYAHIF
Sbjct: 482  RTKKGRAADLALPPRIVSLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIF 541

Query: 1130 DLLTRLRQAVDHPYLVEYSLTAMERKGKTVDSSK---DEKCGLCNEPEEDTVVTSCGHVF 960
            DLLTRLRQAVDHPYLV YS TA +R G  V+S K   ++ CG+C++P E+ VVT+C HVF
Sbjct: 542  DLLTRLRQAVDHPYLVVYSSTASQRAGSIVNSDKNNDEQVCGICHDPTEEPVVTACAHVF 601

Query: 959  CKPCLIDFGASMGQNTCPSCSKPLTVDFTTNKDGKEKSSKTTIKGFRPSSILNRIQLDDF 780
            CK CLIDF AS+GQ +CPSCS+ LTVD TT  D   +SS+TT+KGF+ SSILNRIQL+DF
Sbjct: 602  CKACLIDFSASLGQVSCPSCSRLLTVDLTTKADAGGQSSRTTLKGFKSSSILNRIQLNDF 661

Query: 779  QTSTKIDALREEIRGMVERDGSAKGIVFSQFSSFLDLIHYALQKSGVNCVQLDGSMSMGA 600
            QTSTKI+ALREEI  MVERDGSAKGIVFSQF+SFLDLI+Y+L KSG+NCVQL GSMSM A
Sbjct: 662  QTSTKIEALREEISLMVERDGSAKGIVFSQFTSFLDLINYSLHKSGINCVQLVGSMSMAA 721

Query: 599  RETAIKRFTEDPNCRIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVERQAQDRIHRIGQ 420
            R+ AIKRFTEDP+C+IFLMSLKAGGVALNLTVASHVFLMDPWWNPAVERQAQDRIHRIGQ
Sbjct: 722  RDAAIKRFTEDPDCKIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVERQAQDRIHRIGQ 781

Query: 419  FKPIRIVRFVIENTIEERILKLQEKKELVFEGTVGGSSEALSKLSEADLRFLFVT 255
             KPIRIVRFVIENTIEERILKLQEKKELVFEGTVGGS+EAL KL+EAD+RFLFVT
Sbjct: 782  CKPIRIVRFVIENTIEERILKLQEKKELVFEGTVGGSTEALGKLTEADMRFLFVT 836


>ref|XP_007046385.1| Helicase protein with RING/U-box domain isoform 1 [Theobroma cacao]
            gi|508710320|gb|EOY02217.1| Helicase protein with
            RING/U-box domain isoform 1 [Theobroma cacao]
          Length = 896

 Score = 1114 bits (2882), Expect = 0.0
 Identities = 555/775 (71%), Positives = 642/775 (82%), Gaps = 12/775 (1%)
 Frame = -2

Query: 2543 PILMWEVLEQENERWVAENLELDMDLINQNEMVTEIVEPSDDLIIPLLRYQKEWLAWALK 2364
            P+LMWEV EQE+E+W+ ENL  D+DL  QN ++TE  E S DLIIPLLRYQKEWLAWALK
Sbjct: 125  PLLMWEVWEQEHEKWIDENLTADVDLDQQNAVITETSEASPDLIIPLLRYQKEWLAWALK 184

Query: 2363 QEESSVRGGILADEMGMGKTLQAIALVLLKRNISREIC---GHQLPTSSATFSKELPAIK 2193
            QE+S+ +GGILADEMGMGKT+QAIALVL KR + R I    G  L  SS+T   +LP I+
Sbjct: 185  QEDSATKGGILADEMGMGKTIQAIALVLAKRELLRTIAEPNGSSLTPSSST---DLPMIR 241

Query: 2192 GTLVICPLVAVMQWVSEIERFTSKGSTKVLVYHGANRAKNLYQFAEYDFVITTYSIVEAE 2013
            GTLVICP+VAV QWVSEI+RFTS+GSTKVLVYHG NR KN+ QF +YDFVITTYSIVEAE
Sbjct: 242  GTLVICPVVAVSQWVSEIDRFTSRGSTKVLVYHGTNRGKNIKQFLDYDFVITTYSIVEAE 301

Query: 2012 YRKYVMPPKEKCQYCGKLFYDRKLKIHLRYMCGPGAVRTAKQAKQQRKEPKSKKMSDFEV 1833
            YRKY+MPPKEKC YCGK FY +KL +HL+Y CGP AV+T KQ+KQ+RK+ KS   SD E 
Sbjct: 302  YRKYMMPPKEKCPYCGKSFYQKKLSVHLKYYCGPDAVKTEKQSKQERKKSKSVFKSDREH 361

Query: 1832 STKNAXXXXXXXXXXXXXELENDCPIENSAVDGRVS-----SAGKSILHSVTWERIILDE 1668
            ++                  E D  ++    D           GKS+LHSV WERIILDE
Sbjct: 362  TSNYETDMRKGAGKKKSKHNEEDKDLDFEFDDTFAGVEHSLPQGKSLLHSVKWERIILDE 421

Query: 1667 AHYIKERRSNTTRAVLTLQSSYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYFCKDCDC 1488
            AH++K+RR NT +AVLTL+S YKWALSGTPLQNRVGELYSLVRFLQIVPYSYY CKDCDC
Sbjct: 422  AHFVKDRRCNTAKAVLTLESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDC 481

Query: 1487 RTLDYSTA-ECPGCAHNNVRHFCWWNKHVASPIQDSGNNGCGREAMLVLKHKILRNILLR 1311
            RTLDYS++ +C  C HN+VRHFCWWNK+VA+PIQ  GN   G+ AM++LKHKIL+NI+LR
Sbjct: 482  RTLDYSSSTQCSNCPHNSVRHFCWWNKYVATPIQQCGNGEIGKRAMILLKHKILKNIVLR 541

Query: 1310 RTKKGRAADLALPPRIVTMRRDSLDVVEEDYYTALYNESQAQFNTYIEAGTVLNNYAHIF 1131
            RTKKGRAADLALPPRIV++RRD++D+ E DYY +LY+ESQAQFNTY++AGTV+NNYAHIF
Sbjct: 542  RTKKGRAADLALPPRIVSLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIF 601

Query: 1130 DLLTRLRQAVDHPYLVEYSLTAMERKGKTVDSSK---DEKCGLCNEPEEDTVVTSCGHVF 960
            DLLTRLRQAVDHPYLV YS TA +R G  V+S K   ++ CG+C++P E+ VVT+C HVF
Sbjct: 602  DLLTRLRQAVDHPYLVVYSSTASQRAGSIVNSDKNNDEQVCGICHDPTEEPVVTACAHVF 661

Query: 959  CKPCLIDFGASMGQNTCPSCSKPLTVDFTTNKDGKEKSSKTTIKGFRPSSILNRIQLDDF 780
            CK CLIDF AS+GQ +CPSCS+ LTVD TT  D   +SS+TT+KGF+ SSILNRIQL+DF
Sbjct: 662  CKACLIDFSASLGQVSCPSCSRLLTVDLTTKADAGGQSSRTTLKGFKSSSILNRIQLNDF 721

Query: 779  QTSTKIDALREEIRGMVERDGSAKGIVFSQFSSFLDLIHYALQKSGVNCVQLDGSMSMGA 600
            QTSTKI+ALREEI  MVERDGSAKGIVFSQF+SFLDLI+Y+L KSG+NCVQL GSMSM A
Sbjct: 722  QTSTKIEALREEISLMVERDGSAKGIVFSQFTSFLDLINYSLHKSGINCVQLVGSMSMAA 781

Query: 599  RETAIKRFTEDPNCRIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVERQAQDRIHRIGQ 420
            R+ AIKRFTEDP+C+IFLMSLKAGGVALNLTVASHVFLMDPWWNPAVERQAQDRIHRIGQ
Sbjct: 782  RDAAIKRFTEDPDCKIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVERQAQDRIHRIGQ 841

Query: 419  FKPIRIVRFVIENTIEERILKLQEKKELVFEGTVGGSSEALSKLSEADLRFLFVT 255
             KPIRIVRFVIENTIEERILKLQEKKELVFEGTVGGS+EAL KL+EAD+RFLFVT
Sbjct: 842  CKPIRIVRFVIENTIEERILKLQEKKELVFEGTVGGSTEALGKLTEADMRFLFVT 896


>gb|KJB30318.1| hypothetical protein B456_005G137100 [Gossypium raimondii]
          Length = 840

 Score = 1101 bits (2848), Expect = 0.0
 Identities = 546/770 (70%), Positives = 641/770 (83%), Gaps = 10/770 (1%)
 Frame = -2

Query: 2537 LMWEVLEQENERWVAENLELDMDLINQNEMVTEIVEPSDDLIIPLLRYQKEWLAWALKQE 2358
            LMWEV EQE+E+W+ ENL +D+DL  QN ++TE  + S DLIIPLLRYQKEWLAWALKQE
Sbjct: 73   LMWEVWEQEHEKWIDENLTVDVDLDQQNAVITETSDASSDLIIPLLRYQKEWLAWALKQE 132

Query: 2357 ESSVRGGILADEMGMGKTLQAIALVLLKRNISREICGHQLPTSSATFSKELPAIKGTLVI 2178
            +S+ +GGILADEMGMGKT+QAIALVL KR +   I    + + +A  S +LP I+ TLVI
Sbjct: 133  DSNTKGGILADEMGMGKTIQAIALVLAKRQVLHTIGEPNVSSQTAGSSTDLPRIRCTLVI 192

Query: 2177 CPLVAVMQWVSEIERFTSKGSTKVLVYHGANRAKNLYQFAEYDFVITTYSIVEAEYRKYV 1998
            CP+VAV QWVSEI+RFTS+GSTKVLVYHGANR KN+ QF+EYDFVITTYSIVEAEYRK++
Sbjct: 193  CPVVAVSQWVSEIDRFTSRGSTKVLVYHGANRGKNVKQFSEYDFVITTYSIVEAEYRKFM 252

Query: 1997 MPPKEKCQYCGKLFYDRKLKIHLRYMCGPGAVRTAKQAKQQRKEPKS------KKMSDFE 1836
            MPPKEKC YCGK F+ +KL +HL+Y CGP A++T  Q+KQ+RK+PKS      K  S++E
Sbjct: 253  MPPKEKCPYCGKSFHQKKLSVHLKYYCGPDAIKTENQSKQERKKPKSMFKSGKKHASNYE 312

Query: 1835 VSTKNAXXXXXXXXXXXXXELENDCPIENSAVDGRVSSAGKSILHSVTWERIILDEAHYI 1656
              ++               + + +   E SA        GKS+LHSV WERIILDEAH++
Sbjct: 313  ADSRKRGSKKKAKHNREDKDRDFEFD-ETSAGKEHNLPEGKSLLHSVKWERIILDEAHFV 371

Query: 1655 KERRSNTTRAVLTLQSSYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYFCKDCDCRTLD 1476
            K+RR NT +AVL+L+S YKWALSGTPLQNRVGELYSLVRFLQIVPYSYY CKDCDCRTLD
Sbjct: 372  KDRRCNTAKAVLSLESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDCRTLD 431

Query: 1475 YSTA-ECPGCAHNNVRHFCWWNKHVASPIQDSGNNGCGREAMLVLKHKILRNILLRRTKK 1299
            YS++ +CP C HN+VRHFCWWNK+VA+PIQ  GN   G+ AM++LKHKIL+NI+LRRTKK
Sbjct: 432  YSSSTQCPNCPHNSVRHFCWWNKYVATPIQHYGNGEIGKRAMILLKHKILKNIVLRRTKK 491

Query: 1298 GRAADLALPPRIVTMRRDSLDVVEEDYYTALYNESQAQFNTYIEAGTVLNNYAHIFDLLT 1119
            GRAADLALPPRI+++RRD++D+ E DYY +LY+ESQAQFNTY++AGTV+NNYAHIFDLLT
Sbjct: 492  GRAADLALPPRIISLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLT 551

Query: 1118 RLRQAVDHPYLVEYSLTAMERKGKTV--DSSKDEK-CGLCNEPEEDTVVTSCGHVFCKPC 948
            RLRQAVDHPYLV YS TA +R G  V  D + DE+ CG+CN+P ED VVT+C HVFCK C
Sbjct: 552  RLRQAVDHPYLVVYSSTAAQRAGNMVNGDRNDDEQVCGICNDPAEDPVVTACAHVFCKAC 611

Query: 947  LIDFGASMGQNTCPSCSKPLTVDFTTNKDGKEKSSKTTIKGFRPSSILNRIQLDDFQTST 768
            LIDF AS+G  +CPSCS+ LTVD TTN DG + SSKTT+KGF+ SSILNRIQL+DFQTST
Sbjct: 612  LIDFSASLGNVSCPSCSRLLTVDLTTNADGGQ-SSKTTLKGFKSSSILNRIQLNDFQTST 670

Query: 767  KIDALREEIRGMVERDGSAKGIVFSQFSSFLDLIHYALQKSGVNCVQLDGSMSMGARETA 588
            KI+ALREEIR MVERDGSAKGIVFSQF+SFLD+I Y+L KS + CVQL GSMS+ AR+ A
Sbjct: 671  KIEALREEIRFMVERDGSAKGIVFSQFTSFLDIIKYSLHKSSIKCVQLVGSMSLAARDAA 730

Query: 587  IKRFTEDPNCRIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVERQAQDRIHRIGQFKPI 408
            IK FTEDP+C+IFLMSLKAGGVALNLTVASHVFLMDPWWNPAVERQAQDRIHRIGQ KPI
Sbjct: 731  IKSFTEDPDCKIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVERQAQDRIHRIGQCKPI 790

Query: 407  RIVRFVIENTIEERILKLQEKKELVFEGTVGGSSEALSKLSEADLRFLFV 258
            RIVRFVIENTIEERILKLQEKKELVFEGTVGGS+EAL KL+EAD+RFLFV
Sbjct: 791  RIVRFVIENTIEERILKLQEKKELVFEGTVGGSTEALGKLTEADMRFLFV 840


>gb|KJB30317.1| hypothetical protein B456_005G137100 [Gossypium raimondii]
          Length = 926

 Score = 1101 bits (2848), Expect = 0.0
 Identities = 546/770 (70%), Positives = 641/770 (83%), Gaps = 10/770 (1%)
 Frame = -2

Query: 2537 LMWEVLEQENERWVAENLELDMDLINQNEMVTEIVEPSDDLIIPLLRYQKEWLAWALKQE 2358
            LMWEV EQE+E+W+ ENL +D+DL  QN ++TE  + S DLIIPLLRYQKEWLAWALKQE
Sbjct: 159  LMWEVWEQEHEKWIDENLTVDVDLDQQNAVITETSDASSDLIIPLLRYQKEWLAWALKQE 218

Query: 2357 ESSVRGGILADEMGMGKTLQAIALVLLKRNISREICGHQLPTSSATFSKELPAIKGTLVI 2178
            +S+ +GGILADEMGMGKT+QAIALVL KR +   I    + + +A  S +LP I+ TLVI
Sbjct: 219  DSNTKGGILADEMGMGKTIQAIALVLAKRQVLHTIGEPNVSSQTAGSSTDLPRIRCTLVI 278

Query: 2177 CPLVAVMQWVSEIERFTSKGSTKVLVYHGANRAKNLYQFAEYDFVITTYSIVEAEYRKYV 1998
            CP+VAV QWVSEI+RFTS+GSTKVLVYHGANR KN+ QF+EYDFVITTYSIVEAEYRK++
Sbjct: 279  CPVVAVSQWVSEIDRFTSRGSTKVLVYHGANRGKNVKQFSEYDFVITTYSIVEAEYRKFM 338

Query: 1997 MPPKEKCQYCGKLFYDRKLKIHLRYMCGPGAVRTAKQAKQQRKEPKS------KKMSDFE 1836
            MPPKEKC YCGK F+ +KL +HL+Y CGP A++T  Q+KQ+RK+PKS      K  S++E
Sbjct: 339  MPPKEKCPYCGKSFHQKKLSVHLKYYCGPDAIKTENQSKQERKKPKSMFKSGKKHASNYE 398

Query: 1835 VSTKNAXXXXXXXXXXXXXELENDCPIENSAVDGRVSSAGKSILHSVTWERIILDEAHYI 1656
              ++               + + +   E SA        GKS+LHSV WERIILDEAH++
Sbjct: 399  ADSRKRGSKKKAKHNREDKDRDFEFD-ETSAGKEHNLPEGKSLLHSVKWERIILDEAHFV 457

Query: 1655 KERRSNTTRAVLTLQSSYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYFCKDCDCRTLD 1476
            K+RR NT +AVL+L+S YKWALSGTPLQNRVGELYSLVRFLQIVPYSYY CKDCDCRTLD
Sbjct: 458  KDRRCNTAKAVLSLESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDCRTLD 517

Query: 1475 YSTA-ECPGCAHNNVRHFCWWNKHVASPIQDSGNNGCGREAMLVLKHKILRNILLRRTKK 1299
            YS++ +CP C HN+VRHFCWWNK+VA+PIQ  GN   G+ AM++LKHKIL+NI+LRRTKK
Sbjct: 518  YSSSTQCPNCPHNSVRHFCWWNKYVATPIQHYGNGEIGKRAMILLKHKILKNIVLRRTKK 577

Query: 1298 GRAADLALPPRIVTMRRDSLDVVEEDYYTALYNESQAQFNTYIEAGTVLNNYAHIFDLLT 1119
            GRAADLALPPRI+++RRD++D+ E DYY +LY+ESQAQFNTY++AGTV+NNYAHIFDLLT
Sbjct: 578  GRAADLALPPRIISLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLT 637

Query: 1118 RLRQAVDHPYLVEYSLTAMERKGKTV--DSSKDEK-CGLCNEPEEDTVVTSCGHVFCKPC 948
            RLRQAVDHPYLV YS TA +R G  V  D + DE+ CG+CN+P ED VVT+C HVFCK C
Sbjct: 638  RLRQAVDHPYLVVYSSTAAQRAGNMVNGDRNDDEQVCGICNDPAEDPVVTACAHVFCKAC 697

Query: 947  LIDFGASMGQNTCPSCSKPLTVDFTTNKDGKEKSSKTTIKGFRPSSILNRIQLDDFQTST 768
            LIDF AS+G  +CPSCS+ LTVD TTN DG + SSKTT+KGF+ SSILNRIQL+DFQTST
Sbjct: 698  LIDFSASLGNVSCPSCSRLLTVDLTTNADGGQ-SSKTTLKGFKSSSILNRIQLNDFQTST 756

Query: 767  KIDALREEIRGMVERDGSAKGIVFSQFSSFLDLIHYALQKSGVNCVQLDGSMSMGARETA 588
            KI+ALREEIR MVERDGSAKGIVFSQF+SFLD+I Y+L KS + CVQL GSMS+ AR+ A
Sbjct: 757  KIEALREEIRFMVERDGSAKGIVFSQFTSFLDIIKYSLHKSSIKCVQLVGSMSLAARDAA 816

Query: 587  IKRFTEDPNCRIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVERQAQDRIHRIGQFKPI 408
            IK FTEDP+C+IFLMSLKAGGVALNLTVASHVFLMDPWWNPAVERQAQDRIHRIGQ KPI
Sbjct: 817  IKSFTEDPDCKIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVERQAQDRIHRIGQCKPI 876

Query: 407  RIVRFVIENTIEERILKLQEKKELVFEGTVGGSSEALSKLSEADLRFLFV 258
            RIVRFVIENTIEERILKLQEKKELVFEGTVGGS+EAL KL+EAD+RFLFV
Sbjct: 877  RIVRFVIENTIEERILKLQEKKELVFEGTVGGSTEALGKLTEADMRFLFV 926


>ref|XP_012478613.1| PREDICTED: DNA repair protein RAD16 isoform X2 [Gossypium raimondii]
            gi|763763062|gb|KJB30316.1| hypothetical protein
            B456_005G137100 [Gossypium raimondii]
          Length = 884

 Score = 1101 bits (2848), Expect = 0.0
 Identities = 546/770 (70%), Positives = 641/770 (83%), Gaps = 10/770 (1%)
 Frame = -2

Query: 2537 LMWEVLEQENERWVAENLELDMDLINQNEMVTEIVEPSDDLIIPLLRYQKEWLAWALKQE 2358
            LMWEV EQE+E+W+ ENL +D+DL  QN ++TE  + S DLIIPLLRYQKEWLAWALKQE
Sbjct: 117  LMWEVWEQEHEKWIDENLTVDVDLDQQNAVITETSDASSDLIIPLLRYQKEWLAWALKQE 176

Query: 2357 ESSVRGGILADEMGMGKTLQAIALVLLKRNISREICGHQLPTSSATFSKELPAIKGTLVI 2178
            +S+ +GGILADEMGMGKT+QAIALVL KR +   I    + + +A  S +LP I+ TLVI
Sbjct: 177  DSNTKGGILADEMGMGKTIQAIALVLAKRQVLHTIGEPNVSSQTAGSSTDLPRIRCTLVI 236

Query: 2177 CPLVAVMQWVSEIERFTSKGSTKVLVYHGANRAKNLYQFAEYDFVITTYSIVEAEYRKYV 1998
            CP+VAV QWVSEI+RFTS+GSTKVLVYHGANR KN+ QF+EYDFVITTYSIVEAEYRK++
Sbjct: 237  CPVVAVSQWVSEIDRFTSRGSTKVLVYHGANRGKNVKQFSEYDFVITTYSIVEAEYRKFM 296

Query: 1997 MPPKEKCQYCGKLFYDRKLKIHLRYMCGPGAVRTAKQAKQQRKEPKS------KKMSDFE 1836
            MPPKEKC YCGK F+ +KL +HL+Y CGP A++T  Q+KQ+RK+PKS      K  S++E
Sbjct: 297  MPPKEKCPYCGKSFHQKKLSVHLKYYCGPDAIKTENQSKQERKKPKSMFKSGKKHASNYE 356

Query: 1835 VSTKNAXXXXXXXXXXXXXELENDCPIENSAVDGRVSSAGKSILHSVTWERIILDEAHYI 1656
              ++               + + +   E SA        GKS+LHSV WERIILDEAH++
Sbjct: 357  ADSRKRGSKKKAKHNREDKDRDFEFD-ETSAGKEHNLPEGKSLLHSVKWERIILDEAHFV 415

Query: 1655 KERRSNTTRAVLTLQSSYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYFCKDCDCRTLD 1476
            K+RR NT +AVL+L+S YKWALSGTPLQNRVGELYSLVRFLQIVPYSYY CKDCDCRTLD
Sbjct: 416  KDRRCNTAKAVLSLESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDCRTLD 475

Query: 1475 YSTA-ECPGCAHNNVRHFCWWNKHVASPIQDSGNNGCGREAMLVLKHKILRNILLRRTKK 1299
            YS++ +CP C HN+VRHFCWWNK+VA+PIQ  GN   G+ AM++LKHKIL+NI+LRRTKK
Sbjct: 476  YSSSTQCPNCPHNSVRHFCWWNKYVATPIQHYGNGEIGKRAMILLKHKILKNIVLRRTKK 535

Query: 1298 GRAADLALPPRIVTMRRDSLDVVEEDYYTALYNESQAQFNTYIEAGTVLNNYAHIFDLLT 1119
            GRAADLALPPRI+++RRD++D+ E DYY +LY+ESQAQFNTY++AGTV+NNYAHIFDLLT
Sbjct: 536  GRAADLALPPRIISLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLT 595

Query: 1118 RLRQAVDHPYLVEYSLTAMERKGKTV--DSSKDEK-CGLCNEPEEDTVVTSCGHVFCKPC 948
            RLRQAVDHPYLV YS TA +R G  V  D + DE+ CG+CN+P ED VVT+C HVFCK C
Sbjct: 596  RLRQAVDHPYLVVYSSTAAQRAGNMVNGDRNDDEQVCGICNDPAEDPVVTACAHVFCKAC 655

Query: 947  LIDFGASMGQNTCPSCSKPLTVDFTTNKDGKEKSSKTTIKGFRPSSILNRIQLDDFQTST 768
            LIDF AS+G  +CPSCS+ LTVD TTN DG + SSKTT+KGF+ SSILNRIQL+DFQTST
Sbjct: 656  LIDFSASLGNVSCPSCSRLLTVDLTTNADGGQ-SSKTTLKGFKSSSILNRIQLNDFQTST 714

Query: 767  KIDALREEIRGMVERDGSAKGIVFSQFSSFLDLIHYALQKSGVNCVQLDGSMSMGARETA 588
            KI+ALREEIR MVERDGSAKGIVFSQF+SFLD+I Y+L KS + CVQL GSMS+ AR+ A
Sbjct: 715  KIEALREEIRFMVERDGSAKGIVFSQFTSFLDIIKYSLHKSSIKCVQLVGSMSLAARDAA 774

Query: 587  IKRFTEDPNCRIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVERQAQDRIHRIGQFKPI 408
            IK FTEDP+C+IFLMSLKAGGVALNLTVASHVFLMDPWWNPAVERQAQDRIHRIGQ KPI
Sbjct: 775  IKSFTEDPDCKIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVERQAQDRIHRIGQCKPI 834

Query: 407  RIVRFVIENTIEERILKLQEKKELVFEGTVGGSSEALSKLSEADLRFLFV 258
            RIVRFVIENTIEERILKLQEKKELVFEGTVGGS+EAL KL+EAD+RFLFV
Sbjct: 835  RIVRFVIENTIEERILKLQEKKELVFEGTVGGSTEALGKLTEADMRFLFV 884


>ref|XP_012478612.1| PREDICTED: DNA repair protein RAD16 isoform X1 [Gossypium raimondii]
            gi|763763058|gb|KJB30312.1| hypothetical protein
            B456_005G137100 [Gossypium raimondii]
          Length = 885

 Score = 1101 bits (2848), Expect = 0.0
 Identities = 546/770 (70%), Positives = 641/770 (83%), Gaps = 10/770 (1%)
 Frame = -2

Query: 2537 LMWEVLEQENERWVAENLELDMDLINQNEMVTEIVEPSDDLIIPLLRYQKEWLAWALKQE 2358
            LMWEV EQE+E+W+ ENL +D+DL  QN ++TE  + S DLIIPLLRYQKEWLAWALKQE
Sbjct: 118  LMWEVWEQEHEKWIDENLTVDVDLDQQNAVITETSDASSDLIIPLLRYQKEWLAWALKQE 177

Query: 2357 ESSVRGGILADEMGMGKTLQAIALVLLKRNISREICGHQLPTSSATFSKELPAIKGTLVI 2178
            +S+ +GGILADEMGMGKT+QAIALVL KR +   I    + + +A  S +LP I+ TLVI
Sbjct: 178  DSNTKGGILADEMGMGKTIQAIALVLAKRQVLHTIGEPNVSSQTAGSSTDLPRIRCTLVI 237

Query: 2177 CPLVAVMQWVSEIERFTSKGSTKVLVYHGANRAKNLYQFAEYDFVITTYSIVEAEYRKYV 1998
            CP+VAV QWVSEI+RFTS+GSTKVLVYHGANR KN+ QF+EYDFVITTYSIVEAEYRK++
Sbjct: 238  CPVVAVSQWVSEIDRFTSRGSTKVLVYHGANRGKNVKQFSEYDFVITTYSIVEAEYRKFM 297

Query: 1997 MPPKEKCQYCGKLFYDRKLKIHLRYMCGPGAVRTAKQAKQQRKEPKS------KKMSDFE 1836
            MPPKEKC YCGK F+ +KL +HL+Y CGP A++T  Q+KQ+RK+PKS      K  S++E
Sbjct: 298  MPPKEKCPYCGKSFHQKKLSVHLKYYCGPDAIKTENQSKQERKKPKSMFKSGKKHASNYE 357

Query: 1835 VSTKNAXXXXXXXXXXXXXELENDCPIENSAVDGRVSSAGKSILHSVTWERIILDEAHYI 1656
              ++               + + +   E SA        GKS+LHSV WERIILDEAH++
Sbjct: 358  ADSRKRGSKKKAKHNREDKDRDFEFD-ETSAGKEHNLPEGKSLLHSVKWERIILDEAHFV 416

Query: 1655 KERRSNTTRAVLTLQSSYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYFCKDCDCRTLD 1476
            K+RR NT +AVL+L+S YKWALSGTPLQNRVGELYSLVRFLQIVPYSYY CKDCDCRTLD
Sbjct: 417  KDRRCNTAKAVLSLESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDCRTLD 476

Query: 1475 YSTA-ECPGCAHNNVRHFCWWNKHVASPIQDSGNNGCGREAMLVLKHKILRNILLRRTKK 1299
            YS++ +CP C HN+VRHFCWWNK+VA+PIQ  GN   G+ AM++LKHKIL+NI+LRRTKK
Sbjct: 477  YSSSTQCPNCPHNSVRHFCWWNKYVATPIQHYGNGEIGKRAMILLKHKILKNIVLRRTKK 536

Query: 1298 GRAADLALPPRIVTMRRDSLDVVEEDYYTALYNESQAQFNTYIEAGTVLNNYAHIFDLLT 1119
            GRAADLALPPRI+++RRD++D+ E DYY +LY+ESQAQFNTY++AGTV+NNYAHIFDLLT
Sbjct: 537  GRAADLALPPRIISLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLT 596

Query: 1118 RLRQAVDHPYLVEYSLTAMERKGKTV--DSSKDEK-CGLCNEPEEDTVVTSCGHVFCKPC 948
            RLRQAVDHPYLV YS TA +R G  V  D + DE+ CG+CN+P ED VVT+C HVFCK C
Sbjct: 597  RLRQAVDHPYLVVYSSTAAQRAGNMVNGDRNDDEQVCGICNDPAEDPVVTACAHVFCKAC 656

Query: 947  LIDFGASMGQNTCPSCSKPLTVDFTTNKDGKEKSSKTTIKGFRPSSILNRIQLDDFQTST 768
            LIDF AS+G  +CPSCS+ LTVD TTN DG + SSKTT+KGF+ SSILNRIQL+DFQTST
Sbjct: 657  LIDFSASLGNVSCPSCSRLLTVDLTTNADGGQ-SSKTTLKGFKSSSILNRIQLNDFQTST 715

Query: 767  KIDALREEIRGMVERDGSAKGIVFSQFSSFLDLIHYALQKSGVNCVQLDGSMSMGARETA 588
            KI+ALREEIR MVERDGSAKGIVFSQF+SFLD+I Y+L KS + CVQL GSMS+ AR+ A
Sbjct: 716  KIEALREEIRFMVERDGSAKGIVFSQFTSFLDIIKYSLHKSSIKCVQLVGSMSLAARDAA 775

Query: 587  IKRFTEDPNCRIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVERQAQDRIHRIGQFKPI 408
            IK FTEDP+C+IFLMSLKAGGVALNLTVASHVFLMDPWWNPAVERQAQDRIHRIGQ KPI
Sbjct: 776  IKSFTEDPDCKIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVERQAQDRIHRIGQCKPI 835

Query: 407  RIVRFVIENTIEERILKLQEKKELVFEGTVGGSSEALSKLSEADLRFLFV 258
            RIVRFVIENTIEERILKLQEKKELVFEGTVGGS+EAL KL+EAD+RFLFV
Sbjct: 836  RIVRFVIENTIEERILKLQEKKELVFEGTVGGSTEALGKLTEADMRFLFV 885


>gb|KHG22444.1| ATP-dependent helicase rhp16 [Gossypium arboreum]
          Length = 885

 Score = 1100 bits (2845), Expect = 0.0
 Identities = 546/770 (70%), Positives = 641/770 (83%), Gaps = 10/770 (1%)
 Frame = -2

Query: 2537 LMWEVLEQENERWVAENLELDMDLINQNEMVTEIVEPSDDLIIPLLRYQKEWLAWALKQE 2358
            LMWEV EQE+E+W+ ENL +D+DL  QN ++TE  + S DLIIPLLRYQKEWLAWALKQE
Sbjct: 118  LMWEVWEQEHEKWIDENLTVDVDLDQQNAVITETSDASSDLIIPLLRYQKEWLAWALKQE 177

Query: 2357 ESSVRGGILADEMGMGKTLQAIALVLLKRNISREICGHQLPTSSATFSKELPAIKGTLVI 2178
            +S+ +GGILADEMGMGKT+QAIALVL KR +   I    + + +A  S +LP I+ TLVI
Sbjct: 178  DSNTKGGILADEMGMGKTIQAIALVLAKRQVLHTIGEPNVSSQTAGSSTDLPRIRCTLVI 237

Query: 2177 CPLVAVMQWVSEIERFTSKGSTKVLVYHGANRAKNLYQFAEYDFVITTYSIVEAEYRKYV 1998
            CP+VAV QWVSEI+RFTS+GSTKVLVYHGANR KN+ QF+EYDFVITTYSIVEAEYRK++
Sbjct: 238  CPVVAVSQWVSEIDRFTSRGSTKVLVYHGANRGKNVKQFSEYDFVITTYSIVEAEYRKFM 297

Query: 1997 MPPKEKCQYCGKLFYDRKLKIHLRYMCGPGAVRTAKQAKQQRKEPKS------KKMSDFE 1836
            MPPKEKC YCGK F+ +KL +HL+Y CGP A++T  Q+KQ+RK+PKS      K  S++E
Sbjct: 298  MPPKEKCPYCGKSFHQKKLSVHLKYYCGPDAIKTENQSKQERKKPKSMFKSGKKHASNYE 357

Query: 1835 VSTKNAXXXXXXXXXXXXXELENDCPIENSAVDGRVSSAGKSILHSVTWERIILDEAHYI 1656
              ++               + + +   E SA        GKS+LHSV WERIILDEAH++
Sbjct: 358  ADSRKRASKKKAKHNKEDKDRDFEFD-ETSAGKEHNLPEGKSLLHSVKWERIILDEAHFV 416

Query: 1655 KERRSNTTRAVLTLQSSYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYFCKDCDCRTLD 1476
            K+RR NT +AVL+L+S YKWALSGTPLQNRVGELYSLVRFLQIVPYSYY CKDCDC+TLD
Sbjct: 417  KDRRCNTAKAVLSLESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDCKTLD 476

Query: 1475 YSTA-ECPGCAHNNVRHFCWWNKHVASPIQDSGNNGCGREAMLVLKHKILRNILLRRTKK 1299
            YS++ +CP C HN+VRHFCWWNK+VA+PIQ  GN   G+ AM++LKHKIL+NI+LRRTKK
Sbjct: 477  YSSSTQCPKCPHNSVRHFCWWNKYVATPIQHYGNGEIGKRAMILLKHKILKNIVLRRTKK 536

Query: 1298 GRAADLALPPRIVTMRRDSLDVVEEDYYTALYNESQAQFNTYIEAGTVLNNYAHIFDLLT 1119
            GRAADLALPPRI+++RRD++D+ E DYY +LY+ESQAQFNTY++AGTV+NNYAHIFDLLT
Sbjct: 537  GRAADLALPPRIISLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLT 596

Query: 1118 RLRQAVDHPYLVEYSLTAMERKGKTV--DSSKDEK-CGLCNEPEEDTVVTSCGHVFCKPC 948
            RLRQAVDHPYLV YS TA +R G  V  D + DE+ CG+CN+P ED VVT+C HVFCK C
Sbjct: 597  RLRQAVDHPYLVVYSSTAAQRAGNIVNGDRNDDEQVCGICNDPAEDPVVTACAHVFCKAC 656

Query: 947  LIDFGASMGQNTCPSCSKPLTVDFTTNKDGKEKSSKTTIKGFRPSSILNRIQLDDFQTST 768
            LIDF AS+G  +CPSCS+ LTVD TTN DG + SSKTT+KGF+ SSILNRIQL+DFQTST
Sbjct: 657  LIDFSASLGNVSCPSCSRLLTVDLTTNADGGQ-SSKTTLKGFKSSSILNRIQLNDFQTST 715

Query: 767  KIDALREEIRGMVERDGSAKGIVFSQFSSFLDLIHYALQKSGVNCVQLDGSMSMGARETA 588
            KI+ALREEIR MVERDGSAKGIVFSQF+SFLDLI Y+L KS + CVQL GSMS+ AR+ A
Sbjct: 716  KIEALREEIRFMVERDGSAKGIVFSQFTSFLDLIKYSLHKSSIKCVQLVGSMSLAARDAA 775

Query: 587  IKRFTEDPNCRIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVERQAQDRIHRIGQFKPI 408
            IK FTEDP+C+IFLMSLKAGGVALNLTVASHVFLMDPWWNPAVERQAQDRIHRIGQ KPI
Sbjct: 776  IKSFTEDPDCKIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVERQAQDRIHRIGQCKPI 835

Query: 407  RIVRFVIENTIEERILKLQEKKELVFEGTVGGSSEALSKLSEADLRFLFV 258
            RIVRFVIENTIEERILKLQEKKELVFEGTVGGS+EAL KL+EAD+RFLFV
Sbjct: 836  RIVRFVIENTIEERILKLQEKKELVFEGTVGGSTEALGKLTEADMRFLFV 885