BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00008296
         (834 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_173426.1| hypothetical protein NitaMp085 [Nicotiana tabac...   147   6e-41
emb|CAA34729.1| unnamed protein product (mitochondrion) [Beta vu...   106   1e-22
sp|P15688.2|NU2M_BETVU RecName: Full=NADH-ubiquinone oxidoreduct...   106   2e-22
ref|XP_007013544.1| Uncharacterized protein TCM_038148 [Theobrom...    92   2e-17
emb|CBI23503.3| unnamed protein product [Vitis vinifera]               74   2e-11
ref|XP_002442952.1| hypothetical protein SORBIDRAFT_08g005385, p...    68   5e-11
ref|XP_010088916.1| hypothetical protein L484_018543 [Morus nota...    69   2e-10
gb|KYP77876.1| NADH-ubiquinone oxidoreductase chain 2 [Cajanus c...    70   2e-10
ref|YP_588306.1| hypothetical protein ZeamMp044 (mitochondrion) ...    61   1e-08
gb|EEF28320.1| conserved hypothetical protein [Ricinus communis]       60   1e-08
gb|AEZ03709.1| hypothetical protein (mitochondrion) [Oryza sativ...    60   1e-07
gb|AHJ81036.1| orf105 (mitochondrion) [Panax ginseng]                  43   1e-06

>ref|YP_173426.1| hypothetical protein NitaMp085 [Nicotiana tabacum]
           gi|56806590|dbj|BAD83491.1| hypothetical protein
           (mitochondrion) [Nicotiana tabacum]
          Length = 162

 Score =  147 bits (372), Expect = 6e-41
 Identities = 73/80 (91%), Positives = 76/80 (95%)
 Frame = +3

Query: 390 LQDSGSARESAGNNRKEGVHVAAAPAPFLVNGAQQVRHLLQKRESTSDNHASARQRVEWP 569
           +++SGSARESAGNNRKEGVHVAA  APFLVNGAQQVRHLLQKRESTSDNH SARQRVEWP
Sbjct: 83  IKNSGSARESAGNNRKEGVHVAAVSAPFLVNGAQQVRHLLQKRESTSDNHVSARQRVEWP 142

Query: 570 RADLFGYIIQVESRVTGTAV 629
           RADLFGYIIQVESRVTG AV
Sbjct: 143 RADLFGYIIQVESRVTGKAV 162


>emb|CAA34729.1| unnamed protein product (mitochondrion) [Beta vulgaris subsp.
           vulgaris]
          Length = 464

 Score =  106 bits (264), Expect = 1e-22
 Identities = 71/154 (46%), Positives = 82/154 (53%), Gaps = 6/154 (3%)
 Frame = +3

Query: 390 LQDSGSARESAGNNRKEGVHVAAAPAPFLVNGAQQVRHLLQKRESTSDNHASARQRVEWP 569
           +++SGSARESAGNNRKEGVHVAAA APFLVN A       ++R      +ASA       
Sbjct: 27  IKNSGSARESAGNNRKEGVHVAAASAPFLVNRAAGSATTTKERIHFKITNASAMAACGMA 86

Query: 570 RADLFGYIIQVESRVTGTAV*WKXXXXXXXXXXXXVENSSFPFV*IPQ------RRIQNL 731
            +DLFGYIIQVES VTGTA                V+ + F    +         RIQN 
Sbjct: 87  GSDLFGYIIQVESGVTGTA------GLMENNFHGSVQRALFSLRILRSLRVNSLARIQNF 140

Query: 732 WGPIYSISRAPKKTPSPSDSISLLTLYMWAPDIY 833
           WGP    S +P KTP P         YMWAPDIY
Sbjct: 141 WGPSIP-SSSPAKTPLPFGLNIFFDSYMWAPDIY 173



 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 64/156 (41%), Positives = 74/156 (47%), Gaps = 3/156 (1%)
 Frame = +2

Query: 350 WPIGIAAFGLCLPFTRFRLGPGKR--WQQQKGRGPCSCCARPLLSQWGTAGSASTTKERI 523
           WPIGIAAFGLCL F     G  +      +K     +  + P L     AGSA+TTKERI
Sbjct: 12  WPIGIAAFGLCLLFLIKNSGSARESAGNNRKEGVHVAAASAPFLVN-RAAGSATTTKERI 70

Query: 524 HFR*PRL-C*AACGMAESGPFWIYNPSRE*SYGNSRLMENDXXXXXXXXXXXXXXLVPFR 700
           HF+       AACGMA S  F           G + LMEN+              L   R
Sbjct: 71  HFKITNASAMAACGMAGSDLFGYIIQVESGVTGTAGLMENNFHGSVQRALFSLRILRSLR 130

Query: 701 VNSPAANSKLVGPYLFHLSSPEENPLPFGLNISFDS 808
           VNS A      GP +   SSP + PLPFGLNI FDS
Sbjct: 131 VNSLARIQNFWGPSI-PSSSPAKTPLPFGLNIFFDS 165


>sp|P15688.2|NU2M_BETVU RecName: Full=NADH-ubiquinone oxidoreductase chain 2; AltName:
           Full=NADH dehydrogenase subunit 2
           gi|12822|emb|CAA34728.1| NADH:ubiquinone reductase
           subunit 2 (mitochondrion) [Beta vulgaris subsp.
           vulgaris]
          Length = 515

 Score =  106 bits (264), Expect = 2e-22
 Identities = 71/154 (46%), Positives = 82/154 (53%), Gaps = 6/154 (3%)
 Frame = +3

Query: 390 LQDSGSARESAGNNRKEGVHVAAAPAPFLVNGAQQVRHLLQKRESTSDNHASARQRVEWP 569
           +++SGSARESAGNNRKEGVHVAAA APFLVN A       ++R      +ASA       
Sbjct: 78  IKNSGSARESAGNNRKEGVHVAAASAPFLVNRAAGSATTTKERIHFKITNASAMAACGMA 137

Query: 570 RADLFGYIIQVESRVTGTAV*WKXXXXXXXXXXXXVENSSFPFV*IPQ------RRIQNL 731
            +DLFGYIIQVES VTGTA                V+ + F    +         RIQN 
Sbjct: 138 GSDLFGYIIQVESGVTGTA------GLMENNFHGSVQRALFSLRILRSLRVNSLARIQNF 191

Query: 732 WGPIYSISRAPKKTPSPSDSISLLTLYMWAPDIY 833
           WGP    S +P KTP P         YMWAPDIY
Sbjct: 192 WGPSIP-SSSPAKTPLPFGLNIFFDSYMWAPDIY 224



 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 64/156 (41%), Positives = 74/156 (47%), Gaps = 3/156 (1%)
 Frame = +2

Query: 350 WPIGIAAFGLCLPFTRFRLGPGKR--WQQQKGRGPCSCCARPLLSQWGTAGSASTTKERI 523
           WPIGIAAFGLCL F     G  +      +K     +  + P L     AGSA+TTKERI
Sbjct: 63  WPIGIAAFGLCLLFLIKNSGSARESAGNNRKEGVHVAAASAPFLVN-RAAGSATTTKERI 121

Query: 524 HFR*PRL-C*AACGMAESGPFWIYNPSRE*SYGNSRLMENDXXXXXXXXXXXXXXLVPFR 700
           HF+       AACGMA S  F           G + LMEN+              L   R
Sbjct: 122 HFKITNASAMAACGMAGSDLFGYIIQVESGVTGTAGLMENNFHGSVQRALFSLRILRSLR 181

Query: 701 VNSPAANSKLVGPYLFHLSSPEENPLPFGLNISFDS 808
           VNS A      GP +   SSP + PLPFGLNI FDS
Sbjct: 182 VNSLARIQNFWGPSI-PSSSPAKTPLPFGLNIFFDS 216


>ref|XP_007013544.1| Uncharacterized protein TCM_038148 [Theobroma cacao]
           gi|508783907|gb|EOY31163.1| Uncharacterized protein
           TCM_038148 [Theobroma cacao]
          Length = 538

 Score = 91.7 bits (226), Expect = 2e-17
 Identities = 44/47 (93%), Positives = 46/47 (97%)
 Frame = +3

Query: 489 QQVRHLLQKRESTSDNHASARQRVEWPRADLFGYIIQVESRVTGTAV 629
           +QVRHLL+KRESTSDNHASARQRVEWPRADLFGYIIQVES VTGTAV
Sbjct: 492 EQVRHLLEKRESTSDNHASARQRVEWPRADLFGYIIQVESGVTGTAV 538


>emb|CBI23503.3| unnamed protein product [Vitis vinifera]
          Length = 526

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 30/31 (96%), Positives = 31/31 (100%)
 Frame = +2

Query: 398 FRLGPGKRWQQQKGRGPCSCCARPLLSQWGT 490
           FRLGPGKRWQQQKGRGPCSCCARPLLSQWG+
Sbjct: 193 FRLGPGKRWQQQKGRGPCSCCARPLLSQWGS 223



 Score = 58.5 bits (140), Expect = 3e-06
 Identities = 36/64 (56%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
 Frame = +1

Query: 370 LRALPALYKIPAR--PGKALATTERKGXXXXXXXXXXXXXGHSRFGIYYKRENPLQITTP 543
           LRALPALY    R  PGK     + +G             G SRFGIYYKRENPLQITTP
Sbjct: 182 LRALPALYNKEFRLGPGKRWQQQKGRGPCSCCARPLLSQWG-SRFGIYYKRENPLQITTP 240

Query: 544 LLGS 555
           LLGS
Sbjct: 241 LLGS 244


>ref|XP_002442952.1| hypothetical protein SORBIDRAFT_08g005385, partial [Sorghum
           bicolor]
          Length = 102

 Score = 67.8 bits (164), Expect = 5e-11
 Identities = 34/53 (64%), Positives = 40/53 (75%)
 Frame = +3

Query: 675 VENSSFPFV*IPQRRIQNLWGPIYSISRAPKKTPSPSDSISLLTLYMWAPDIY 833
           VEN S     +    + NLWGPIYSISRAP+K+PSPS+SISLL LYM +PDIY
Sbjct: 11  VENKSL-LCELSSGELTNLWGPIYSISRAPRKSPSPSNSISLLILYMLSPDIY 62


>ref|XP_010088916.1| hypothetical protein L484_018543 [Morus notabilis]
           gi|587846655|gb|EXB37120.1| hypothetical protein
           L484_018543 [Morus notabilis]
          Length = 240

 Score = 69.3 bits (168), Expect = 2e-10
 Identities = 34/40 (85%), Positives = 36/40 (90%)
 Frame = -2

Query: 197 GSSILFSSRELPDRRSIRNGLRVHFVGRKDPIHKINTETK 78
           GSSILFSS+EL DRRSIRNGLRVHFVGRKDPIH  N +TK
Sbjct: 194 GSSILFSSQELLDRRSIRNGLRVHFVGRKDPIHSGNPKTK 233


>gb|KYP77876.1| NADH-ubiquinone oxidoreductase chain 2 [Cajanus cajan]
          Length = 308

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 28/32 (87%), Positives = 30/32 (93%)
 Frame = +2

Query: 398 FRLGPGKRWQQQKGRGPCSCCARPLLSQWGTA 493
           F LGPGKRWQQQKGRGPCSCC RPLLSQWG++
Sbjct: 144 FILGPGKRWQQQKGRGPCSCCVRPLLSQWGSS 175


>ref|YP_588306.1| hypothetical protein ZeamMp044 (mitochondrion) [Zea mays subsp.
           mays] gi|40795129|gb|AAR91173.1| hypothetical protein
           (mitochondrion) [Zea mays] gi|102579662|gb|ABF70942.1|
           hypothetical protein (mitochondrion) [Zea mays subsp.
           mays]
          Length = 101

 Score = 61.2 bits (147), Expect = 1e-08
 Identities = 25/30 (83%), Positives = 27/30 (90%)
 Frame = +2

Query: 398 FRLGPGKRWQQQKGRGPCSCCARPLLSQWG 487
           FRLGPGKRWQQ K RGPCSCCARPL S++G
Sbjct: 61  FRLGPGKRWQQHKERGPCSCCARPLSSRFG 90


>gb|EEF28320.1| conserved hypothetical protein [Ricinus communis]
          Length = 83

 Score = 60.5 bits (145), Expect = 1e-08
 Identities = 27/49 (55%), Positives = 33/49 (67%), Gaps = 2/49 (4%)
 Frame = +2

Query: 350 WPIGIAAFGL--CLPFTRFRLGPGKRWQQQKGRGPCSCCARPLLSQWGT 490
           WPIG ++      L    FRL P +RWQQ KG+GPCSC  RPLLS+WG+
Sbjct: 30  WPIGDSSLQALPALSNKNFRLDPRERWQQHKGKGPCSCYVRPLLSKWGS 78


>gb|AEZ03709.1| hypothetical protein (mitochondrion) [Oryza sativa Indica Group]
           gi|374277705|gb|AEZ03810.1| hypothetical protein
           (mitochondrion) [Oryza sativa Indica Group]
          Length = 164

 Score = 60.1 bits (144), Expect = 1e-07
 Identities = 29/52 (55%), Positives = 36/52 (69%)
 Frame = -1

Query: 489 VPH*LRRGRAQQLHGPLPFCCCQRFPGPSRNLVKGRQSPKAAIPIGQGMTKR 334
           +P+ L  GRAQQLHGPL  CCCQRFPGPSRN +  R+  K   P G+ ++ R
Sbjct: 1   MPNLLLSGRAQQLHGPLSLCCCQRFPGPSRNSLLERRQAK---PEGRQLSPR 49


>gb|AHJ81036.1| orf105 (mitochondrion) [Panax ginseng]
          Length = 108

 Score = 43.1 bits (100), Expect(2) = 1e-06
 Identities = 21/26 (80%), Positives = 23/26 (88%)
 Frame = -2

Query: 449 MDPFLSVVASAFPGRAGIL*RAGKAR 372
           MDPFLSVVASAFPGRAGIL   G+A+
Sbjct: 1   MDPFLSVVASAFPGRAGILYYKGQAK 26



 Score = 38.1 bits (87), Expect(2) = 1e-06
 Identities = 15/20 (75%), Positives = 16/20 (80%)
 Frame = -3

Query: 391 KGQAKPEGCYPNRPRDDKKR 332
           KGQAKPEGCYPNRP    +R
Sbjct: 22  KGQAKPEGCYPNRPAGGTRR 41