BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00008054
         (2486 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011099942.1| PREDICTED: DNA repair protein complementing ...  1066   0.0  
ref|XP_011099941.1| PREDICTED: DNA repair protein complementing ...  1066   0.0  
ref|XP_009589685.1| PREDICTED: DNA repair protein complementing ...   824   0.0  
ref|XP_009589684.1| PREDICTED: DNA repair protein complementing ...   824   0.0  
ref|XP_006430573.1| hypothetical protein CICLE_v10010990mg [Citr...   818   0.0  
ref|XP_007032989.1| DNA repair protein xp-C / rad4, putative iso...   813   0.0  
ref|XP_006482097.1| PREDICTED: DNA repair protein RAD4 isoform X...   815   0.0  
ref|XP_006482096.1| PREDICTED: DNA repair protein RAD4 isoform X...   815   0.0  
ref|XP_011007252.1| PREDICTED: DNA repair protein complementing ...   809   0.0  
ref|XP_007032988.1| DNA repair protein xp-C / rad4, putative iso...   813   0.0  
ref|XP_009789278.1| PREDICTED: DNA repair protein complementing ...   808   0.0  
ref|XP_011007251.1| PREDICTED: DNA repair protein complementing ...   809   0.0  
gb|KDO50783.1| hypothetical protein CISIN_1g002340mg [Citrus sin...   801   0.0  
gb|KDO50782.1| hypothetical protein CISIN_1g002340mg [Citrus sin...   801   0.0  
ref|XP_010660313.1| PREDICTED: DNA repair protein complementing ...   800   0.0  
ref|XP_012077823.1| PREDICTED: DNA repair protein complementing ...   793   0.0  
ref|XP_002305874.2| hypothetical protein POPTR_0004s08580g [Popu...   776   0.0  
ref|XP_012471970.1| PREDICTED: DNA repair protein complementing ...   771   0.0  
ref|XP_012471962.1| PREDICTED: DNA repair protein complementing ...   771   0.0  
gb|KHF97241.1| DNA repair complementing XP-C cells [Gossypium ar...   769   0.0  

>ref|XP_011099942.1| PREDICTED: DNA repair protein complementing XP-C cells homolog
            isoform X2 [Sesamum indicum]
          Length = 949

 Score = 1066 bits (2757), Expect = 0.0
 Identities = 554/764 (72%), Positives = 608/764 (79%), Gaps = 8/764 (1%)
 Frame = -1

Query: 2486 THLHKIAEAPNLTASHLSPLVSWFHNNFHVRSPSVAEKSCHFALASTLETREGSPEAVAA 2307
            THL KIAE+  LTAS L PLVSWFHNNFHVRS SVAEKSCH ALASTLETREG+PEAVAA
Sbjct: 189  THLLKIAESSKLTASRLVPLVSWFHNNFHVRSQSVAEKSCHSALASTLETREGTPEAVAA 248

Query: 2306 LSVALFRALNLTTRFVSILDVISLKPDADKSESSVADGCKNERDIFSSSTLMVAGPSCSS 2127
            LSVALFRALNLTTRFVSILDV+SLKPD D SE  +    K  RDIFSSSTLMVAGPSCSS
Sbjct: 249  LSVALFRALNLTTRFVSILDVVSLKPDGDISEHIMEVCSKRGRDIFSSSTLMVAGPSCSS 308

Query: 2126 AYTVKPSPYVEQDSSQTAIRGAGRQKADKSRKHELQSQDSLITDKPTDKMSEVSVSEVPT 1947
            A T K    VE   SQ+A  GAGR KADKS+K+ LQ QDSL  DKP DKMS+V+V E P 
Sbjct: 309  ASTSKSPTGVEHGISQSAAGGAGRHKADKSKKNGLQCQDSLTIDKPKDKMSDVAVPETPI 368

Query: 1946 DTSEPCLVKSEGLKRKGDLEFQMQLEMALSATAVVNSHVSMASDAXXXXXXXXXXXXS-K 1770
            D SEPCLVKS+GLKRKGDLEFQMQLEMALSATA+ +S +SMAS A              K
Sbjct: 369  DISEPCLVKSDGLKRKGDLEFQMQLEMALSATAIGSSKISMASSASESPSRSSTLTPPSK 428

Query: 1769 RMKKIRKEESQTCSNGISTAIGSKKVGAPLYWAEVFCGGENLTGKWVHVDAVNAIIDGEH 1590
            RM+KI+KEESQT S+GISTAIGSKKVGAPLYWAEVFC GENLTGKWVHVDA+N I+DGEH
Sbjct: 429  RMRKIKKEESQTSSDGISTAIGSKKVGAPLYWAEVFCCGENLTGKWVHVDAINGIVDGEH 488

Query: 1589 KVEAAAAACKKSLRYVVAFAGHGAKDVTRRYCTKWYKVAAQRINSTWWDAVLEPLKELES 1410
            KVEAAA ACKKSLRYVVAFAG GAKDVTRRYCTKWYKVAA+R+NS+WWDAVL PL+ELES
Sbjct: 489  KVEAAALACKKSLRYVVAFAGQGAKDVTRRYCTKWYKVAAKRVNSSWWDAVLAPLRELES 548

Query: 1409 GATGGVVSVECEASCQKKVEVSQVEPS-------MSNSCGASMDSCEKKATESFMRNSFA 1251
            GATGG V++E EAS  +K E SQV  S        ++SCGA  +  EK+   S MR SFA
Sbjct: 549  GATGGGVNLEYEASSHEKNEESQVANSNHGCSIDKNHSCGACKECSEKQVEGSSMRKSFA 608

Query: 1250 STRGSLEDMELETRALIEPLPTNQQAYRNHHLYVIERWLKKYEILYPKGPVLGFCSGHSV 1071
            STR SLEDMELETRAL EPLPTNQQAYRNH LYVIERWL K ++LYPKGPVLGFCSGH+V
Sbjct: 609  STRSSLEDMELETRALTEPLPTNQQAYRNHQLYVIERWLNKNQVLYPKGPVLGFCSGHAV 668

Query: 1070 YPRTCVQTLHTKERWLREGLQVKAGEVPVKVLKRSMKCSKEEAGDDNDYAEVDHQGITSL 891
            YPRTCV+TL TKERW REGLQVKAGEVP KVLKRS+K  KEEA DDN+Y + DHQ IT+L
Sbjct: 669  YPRTCVRTLRTKERWFREGLQVKAGEVPAKVLKRSLKRGKEEAADDNNYTDGDHQDITAL 728

Query: 890  YGKWQTEPLCLPRAVNGIVPKNERGQVDVWSEKCLPPGTIHLRLPRVATVARRLDIDFAP 711
            YG+WQTEPL LPRAVNGIVPKNERG+VDVWSEKCLPPGT+HLRLPRVA VA+RLDID+A 
Sbjct: 729  YGRWQTEPLHLPRAVNGIVPKNERGRVDVWSEKCLPPGTVHLRLPRVAAVAKRLDIDYAH 788

Query: 710  AMVGFDFRNGRSVPLFEGIVVCTEFKDAILXXXXXXXXXXXXXXXXXXXAQALSRWYQLL 531
            AMVGF+FRNGRS PLFEGIVVCTEFKDAIL                   A ALSRWYQLL
Sbjct: 789  AMVGFEFRNGRSAPLFEGIVVCTEFKDAILQAYLEEEERREAEEKRRNEALALSRWYQLL 848

Query: 530  SSIITRKRLNECYGDGALPQSSIEIPKSGDKCYNSSATATATQKTEASPECQQVNIPEKL 351
            SSIITR+RLN CYG GAL Q S EIPKS DKC   S +AT  Q+  ASP CQQ +  EK 
Sbjct: 849  SSIITRQRLNSCYGAGALSQPSSEIPKSDDKC---STSATRAQEIVASPRCQQDDTSEKP 905

Query: 350  NAPSSMPTENHEHEFILDEKKVDEGGLTRIKRCHCGFSIQFEEL 219
                SMP ENHEHEF+LD++   E G T++KRC CGF +QFE +
Sbjct: 906  YVLPSMPEENHEHEFVLDKEVFGEEGPTQVKRCRCGFLVQFETI 949


>ref|XP_011099941.1| PREDICTED: DNA repair protein complementing XP-C cells homolog
            isoform X1 [Sesamum indicum]
          Length = 967

 Score = 1066 bits (2757), Expect = 0.0
 Identities = 554/764 (72%), Positives = 608/764 (79%), Gaps = 8/764 (1%)
 Frame = -1

Query: 2486 THLHKIAEAPNLTASHLSPLVSWFHNNFHVRSPSVAEKSCHFALASTLETREGSPEAVAA 2307
            THL KIAE+  LTAS L PLVSWFHNNFHVRS SVAEKSCH ALASTLETREG+PEAVAA
Sbjct: 207  THLLKIAESSKLTASRLVPLVSWFHNNFHVRSQSVAEKSCHSALASTLETREGTPEAVAA 266

Query: 2306 LSVALFRALNLTTRFVSILDVISLKPDADKSESSVADGCKNERDIFSSSTLMVAGPSCSS 2127
            LSVALFRALNLTTRFVSILDV+SLKPD D SE  +    K  RDIFSSSTLMVAGPSCSS
Sbjct: 267  LSVALFRALNLTTRFVSILDVVSLKPDGDISEHIMEVCSKRGRDIFSSSTLMVAGPSCSS 326

Query: 2126 AYTVKPSPYVEQDSSQTAIRGAGRQKADKSRKHELQSQDSLITDKPTDKMSEVSVSEVPT 1947
            A T K    VE   SQ+A  GAGR KADKS+K+ LQ QDSL  DKP DKMS+V+V E P 
Sbjct: 327  ASTSKSPTGVEHGISQSAAGGAGRHKADKSKKNGLQCQDSLTIDKPKDKMSDVAVPETPI 386

Query: 1946 DTSEPCLVKSEGLKRKGDLEFQMQLEMALSATAVVNSHVSMASDAXXXXXXXXXXXXS-K 1770
            D SEPCLVKS+GLKRKGDLEFQMQLEMALSATA+ +S +SMAS A              K
Sbjct: 387  DISEPCLVKSDGLKRKGDLEFQMQLEMALSATAIGSSKISMASSASESPSRSSTLTPPSK 446

Query: 1769 RMKKIRKEESQTCSNGISTAIGSKKVGAPLYWAEVFCGGENLTGKWVHVDAVNAIIDGEH 1590
            RM+KI+KEESQT S+GISTAIGSKKVGAPLYWAEVFC GENLTGKWVHVDA+N I+DGEH
Sbjct: 447  RMRKIKKEESQTSSDGISTAIGSKKVGAPLYWAEVFCCGENLTGKWVHVDAINGIVDGEH 506

Query: 1589 KVEAAAAACKKSLRYVVAFAGHGAKDVTRRYCTKWYKVAAQRINSTWWDAVLEPLKELES 1410
            KVEAAA ACKKSLRYVVAFAG GAKDVTRRYCTKWYKVAA+R+NS+WWDAVL PL+ELES
Sbjct: 507  KVEAAALACKKSLRYVVAFAGQGAKDVTRRYCTKWYKVAAKRVNSSWWDAVLAPLRELES 566

Query: 1409 GATGGVVSVECEASCQKKVEVSQVEPS-------MSNSCGASMDSCEKKATESFMRNSFA 1251
            GATGG V++E EAS  +K E SQV  S        ++SCGA  +  EK+   S MR SFA
Sbjct: 567  GATGGGVNLEYEASSHEKNEESQVANSNHGCSIDKNHSCGACKECSEKQVEGSSMRKSFA 626

Query: 1250 STRGSLEDMELETRALIEPLPTNQQAYRNHHLYVIERWLKKYEILYPKGPVLGFCSGHSV 1071
            STR SLEDMELETRAL EPLPTNQQAYRNH LYVIERWL K ++LYPKGPVLGFCSGH+V
Sbjct: 627  STRSSLEDMELETRALTEPLPTNQQAYRNHQLYVIERWLNKNQVLYPKGPVLGFCSGHAV 686

Query: 1070 YPRTCVQTLHTKERWLREGLQVKAGEVPVKVLKRSMKCSKEEAGDDNDYAEVDHQGITSL 891
            YPRTCV+TL TKERW REGLQVKAGEVP KVLKRS+K  KEEA DDN+Y + DHQ IT+L
Sbjct: 687  YPRTCVRTLRTKERWFREGLQVKAGEVPAKVLKRSLKRGKEEAADDNNYTDGDHQDITAL 746

Query: 890  YGKWQTEPLCLPRAVNGIVPKNERGQVDVWSEKCLPPGTIHLRLPRVATVARRLDIDFAP 711
            YG+WQTEPL LPRAVNGIVPKNERG+VDVWSEKCLPPGT+HLRLPRVA VA+RLDID+A 
Sbjct: 747  YGRWQTEPLHLPRAVNGIVPKNERGRVDVWSEKCLPPGTVHLRLPRVAAVAKRLDIDYAH 806

Query: 710  AMVGFDFRNGRSVPLFEGIVVCTEFKDAILXXXXXXXXXXXXXXXXXXXAQALSRWYQLL 531
            AMVGF+FRNGRS PLFEGIVVCTEFKDAIL                   A ALSRWYQLL
Sbjct: 807  AMVGFEFRNGRSAPLFEGIVVCTEFKDAILQAYLEEEERREAEEKRRNEALALSRWYQLL 866

Query: 530  SSIITRKRLNECYGDGALPQSSIEIPKSGDKCYNSSATATATQKTEASPECQQVNIPEKL 351
            SSIITR+RLN CYG GAL Q S EIPKS DKC   S +AT  Q+  ASP CQQ +  EK 
Sbjct: 867  SSIITRQRLNSCYGAGALSQPSSEIPKSDDKC---STSATRAQEIVASPRCQQDDTSEKP 923

Query: 350  NAPSSMPTENHEHEFILDEKKVDEGGLTRIKRCHCGFSIQFEEL 219
                SMP ENHEHEF+LD++   E G T++KRC CGF +QFE +
Sbjct: 924  YVLPSMPEENHEHEFVLDKEVFGEEGPTQVKRCRCGFLVQFETI 967


>ref|XP_009589685.1| PREDICTED: DNA repair protein complementing XP-C cells homolog
            isoform X2 [Nicotiana tomentosiformis]
          Length = 858

 Score =  824 bits (2128), Expect = 0.0
 Identities = 446/758 (58%), Positives = 526/758 (69%), Gaps = 3/758 (0%)
 Frame = -1

Query: 2483 HLHKIAEAPNLTASHLSPLVSWFHNNFHVRSPSVAEKSCHFALASTLETREGSPEAVAAL 2304
            HL K+ + P LT   L+PLVSWFH++F VR  S +EKS H ALASTLE++EG+PE VAAL
Sbjct: 156  HLLKLTDVPKLTTKALTPLVSWFHSHFRVRGASDSEKSFHSALASTLESQEGTPEEVAAL 215

Query: 2303 SVALFRALNLTTRFVSILDVISLKPDADKSESSVADGCKNERDIFSSSTLMVAGPSCSSA 2124
            SVALFRALNLTTRFVSILDV SLKP+ +K   S     K    IF+SSTLMVA P  S  
Sbjct: 216  SVALFRALNLTTRFVSILDVASLKPEIEKPYPSGQSPSKAGSGIFNSSTLMVAAPKYSPL 275

Query: 2123 YTVKPSPYVEQDSSQTAIRGAGRQKADKSRKHELQSQDSLITDKPTDKMSEVSVSEVPTD 1944
               K                 G+   DKSR        + ITDK   +MS  S S+   D
Sbjct: 276  SPAKSL-------------ADGKHYNDKSR--------ATITDKSNKRMSP-STSDALRD 313

Query: 1943 TSEPCLVKSEGLKRKGDLEFQMQLEMALSATAVVNSHVSMASDAXXXXXXXXXXXXSKRM 1764
             ++ C++K E  KRKGDLEF+MQLEMALS+TAV     +M S+              K+ 
Sbjct: 314  ANDACIMKREQPKRKGDLEFEMQLEMALSSTAVEIVRNTMVSEVADVQSTSSNVSPFKK- 372

Query: 1763 KKIRKEESQTCSNGISTAIGSKKVGAPLYWAEVFCGGENLTGKWVHVDAVNAIIDGEHKV 1584
            KKI+ EE  T S+G+STA+GS+KVGAPLYWAEV+C GENLTGKWVHVD VNAI DGE  V
Sbjct: 373  KKIKAEECSTSSHGLSTAVGSRKVGAPLYWAEVYCSGENLTGKWVHVDVVNAITDGELNV 432

Query: 1583 EAAAAACKKSLRYVVAFAGHGAKDVTRRYCTKWYKVAAQRINSTWWDAVLEPLKELESGA 1404
            EAAAAACK  LRYVVAFAG+GAKDVTRRYCTKWYK+A++R+NS WWDAVL PLKELES A
Sbjct: 433  EAAAAACKSHLRYVVAFAGNGAKDVTRRYCTKWYKIASERVNSIWWDAVLAPLKELESVA 492

Query: 1403 TGGVVSVECEASCQ-KKVEVSQVEPSMSNSCGASMDSCEKKATESFMRNSFASTRGSLED 1227
            T  VV +  E S + KK EV+Q                              +TR SLED
Sbjct: 493  TSDVVHLRQETSDESKKTEVAQS----------------------------TATRSSLED 524

Query: 1226 MELETRALIEPLPTNQQAYRNHHLYVIERWLKKYEILYPKGPVLGFCSGHSVYPRTCVQT 1047
            MELETRAL EPLPTNQQAYRNHHLY+IERWL KY+ILYPKGPVLGFCSGH VYPR+CVQT
Sbjct: 525  MELETRALTEPLPTNQQAYRNHHLYIIERWLNKYQILYPKGPVLGFCSGHPVYPRSCVQT 584

Query: 1046 LHTKERWLREGLQVKAGEVPVKVLKRSMKCSKEEAGDDNDYAEVDHQGITSLYGKWQTEP 867
            L  KE+WLREGLQVKA E+P KVLK S K +KE+   D+DY E D  G  +LYG+WQTEP
Sbjct: 585  LKRKEKWLREGLQVKANEIPAKVLKHSGKQNKEQDVKDDDYGEEDCGGTVALYGQWQTEP 644

Query: 866  LCLPRAVNGIVPKNERGQVDVWSEKCLPPGTIHLRLPRVATVARRLDIDFAPAMVGFDFR 687
            L LP AVNGIVPKNERGQVDVWSEKCLPPGT+HLRLPR+  VA+RL+IDFAPAMVGF+FR
Sbjct: 645  LFLPHAVNGIVPKNERGQVDVWSEKCLPPGTVHLRLPRLVPVAKRLEIDFAPAMVGFEFR 704

Query: 686  NGRSVPLFEGIVVCTEFKDAILXXXXXXXXXXXXXXXXXXXAQALSRWYQLLSSIITRKR 507
            NGRS+P++EGIVVC EFKDAIL                   A+ALSRWYQLL+S+ITR+R
Sbjct: 705  NGRSLPVYEGIVVCIEFKDAILETYAEEEERRQANERKRSEAEALSRWYQLLASLITRQR 764

Query: 506  LNECYGDGALPQSSIEIPKSGDKCYNSSATATATQKTEASPECQQ--VNIPEKLNAPSSM 333
            L+ CY DGA  QS+I    S DK   SS  A  T+ T+ +PE QQ    I + + +PS++
Sbjct: 765  LHNCYADGASSQSAINFATSNDK---SSLLARGTEDTKTTPEYQQEKSEIAQSI-SPSTV 820

Query: 332  PTENHEHEFILDEKKVDEGGLTRIKRCHCGFSIQFEEL 219
              E+HEH F+++++ VDE   TR KRC CGFS+Q+EEL
Sbjct: 821  LAEDHEHVFLVEDQTVDEESSTRTKRCRCGFSVQYEEL 858


>ref|XP_009589684.1| PREDICTED: DNA repair protein complementing XP-C cells homolog
            isoform X1 [Nicotiana tomentosiformis]
          Length = 932

 Score =  824 bits (2128), Expect = 0.0
 Identities = 446/758 (58%), Positives = 526/758 (69%), Gaps = 3/758 (0%)
 Frame = -1

Query: 2483 HLHKIAEAPNLTASHLSPLVSWFHNNFHVRSPSVAEKSCHFALASTLETREGSPEAVAAL 2304
            HL K+ + P LT   L+PLVSWFH++F VR  S +EKS H ALASTLE++EG+PE VAAL
Sbjct: 230  HLLKLTDVPKLTTKALTPLVSWFHSHFRVRGASDSEKSFHSALASTLESQEGTPEEVAAL 289

Query: 2303 SVALFRALNLTTRFVSILDVISLKPDADKSESSVADGCKNERDIFSSSTLMVAGPSCSSA 2124
            SVALFRALNLTTRFVSILDV SLKP+ +K   S     K    IF+SSTLMVA P  S  
Sbjct: 290  SVALFRALNLTTRFVSILDVASLKPEIEKPYPSGQSPSKAGSGIFNSSTLMVAAPKYSPL 349

Query: 2123 YTVKPSPYVEQDSSQTAIRGAGRQKADKSRKHELQSQDSLITDKPTDKMSEVSVSEVPTD 1944
               K                 G+   DKSR        + ITDK   +MS  S S+   D
Sbjct: 350  SPAKSL-------------ADGKHYNDKSR--------ATITDKSNKRMSP-STSDALRD 387

Query: 1943 TSEPCLVKSEGLKRKGDLEFQMQLEMALSATAVVNSHVSMASDAXXXXXXXXXXXXSKRM 1764
             ++ C++K E  KRKGDLEF+MQLEMALS+TAV     +M S+              K+ 
Sbjct: 388  ANDACIMKREQPKRKGDLEFEMQLEMALSSTAVEIVRNTMVSEVADVQSTSSNVSPFKK- 446

Query: 1763 KKIRKEESQTCSNGISTAIGSKKVGAPLYWAEVFCGGENLTGKWVHVDAVNAIIDGEHKV 1584
            KKI+ EE  T S+G+STA+GS+KVGAPLYWAEV+C GENLTGKWVHVD VNAI DGE  V
Sbjct: 447  KKIKAEECSTSSHGLSTAVGSRKVGAPLYWAEVYCSGENLTGKWVHVDVVNAITDGELNV 506

Query: 1583 EAAAAACKKSLRYVVAFAGHGAKDVTRRYCTKWYKVAAQRINSTWWDAVLEPLKELESGA 1404
            EAAAAACK  LRYVVAFAG+GAKDVTRRYCTKWYK+A++R+NS WWDAVL PLKELES A
Sbjct: 507  EAAAAACKSHLRYVVAFAGNGAKDVTRRYCTKWYKIASERVNSIWWDAVLAPLKELESVA 566

Query: 1403 TGGVVSVECEASCQ-KKVEVSQVEPSMSNSCGASMDSCEKKATESFMRNSFASTRGSLED 1227
            T  VV +  E S + KK EV+Q                              +TR SLED
Sbjct: 567  TSDVVHLRQETSDESKKTEVAQS----------------------------TATRSSLED 598

Query: 1226 MELETRALIEPLPTNQQAYRNHHLYVIERWLKKYEILYPKGPVLGFCSGHSVYPRTCVQT 1047
            MELETRAL EPLPTNQQAYRNHHLY+IERWL KY+ILYPKGPVLGFCSGH VYPR+CVQT
Sbjct: 599  MELETRALTEPLPTNQQAYRNHHLYIIERWLNKYQILYPKGPVLGFCSGHPVYPRSCVQT 658

Query: 1046 LHTKERWLREGLQVKAGEVPVKVLKRSMKCSKEEAGDDNDYAEVDHQGITSLYGKWQTEP 867
            L  KE+WLREGLQVKA E+P KVLK S K +KE+   D+DY E D  G  +LYG+WQTEP
Sbjct: 659  LKRKEKWLREGLQVKANEIPAKVLKHSGKQNKEQDVKDDDYGEEDCGGTVALYGQWQTEP 718

Query: 866  LCLPRAVNGIVPKNERGQVDVWSEKCLPPGTIHLRLPRVATVARRLDIDFAPAMVGFDFR 687
            L LP AVNGIVPKNERGQVDVWSEKCLPPGT+HLRLPR+  VA+RL+IDFAPAMVGF+FR
Sbjct: 719  LFLPHAVNGIVPKNERGQVDVWSEKCLPPGTVHLRLPRLVPVAKRLEIDFAPAMVGFEFR 778

Query: 686  NGRSVPLFEGIVVCTEFKDAILXXXXXXXXXXXXXXXXXXXAQALSRWYQLLSSIITRKR 507
            NGRS+P++EGIVVC EFKDAIL                   A+ALSRWYQLL+S+ITR+R
Sbjct: 779  NGRSLPVYEGIVVCIEFKDAILETYAEEEERRQANERKRSEAEALSRWYQLLASLITRQR 838

Query: 506  LNECYGDGALPQSSIEIPKSGDKCYNSSATATATQKTEASPECQQ--VNIPEKLNAPSSM 333
            L+ CY DGA  QS+I    S DK   SS  A  T+ T+ +PE QQ    I + + +PS++
Sbjct: 839  LHNCYADGASSQSAINFATSNDK---SSLLARGTEDTKTTPEYQQEKSEIAQSI-SPSTV 894

Query: 332  PTENHEHEFILDEKKVDEGGLTRIKRCHCGFSIQFEEL 219
              E+HEH F+++++ VDE   TR KRC CGFS+Q+EEL
Sbjct: 895  LAEDHEHVFLVEDQTVDEESSTRTKRCRCGFSVQYEEL 932


>ref|XP_006430573.1| hypothetical protein CICLE_v10010990mg [Citrus clementina]
            gi|557532630|gb|ESR43813.1| hypothetical protein
            CICLE_v10010990mg [Citrus clementina]
          Length = 974

 Score =  818 bits (2113), Expect = 0.0
 Identities = 440/768 (57%), Positives = 529/768 (68%), Gaps = 12/768 (1%)
 Frame = -1

Query: 2486 THLHKIAEAPNLTASHLSPLVSWFHNNFHVRSPSVAEKSCHFALASTLETREGSPEAVAA 2307
            ++L KI+E   LTA+ LSP+VSWFH+NFHVRS     +S H ALA  LE+REG+PE +AA
Sbjct: 215  SYLLKISEVSKLTANALSPIVSWFHDNFHVRSSVSTRRSFHSALAHALESREGTPEEIAA 274

Query: 2306 LSVALFRALNLTTRFVSILDVISLKPDADKSESSVADGCKNERDIFSSSTLMVAGPSCSS 2127
            LSVALFRAL LTTRFVSILDV SLKP+ADK+ SS  D  +    IF++ TLMVA P    
Sbjct: 275  LSVALFRALKLTTRFVSILDVASLKPEADKNVSSNQDSSRVGGGIFNAPTLMVAKPEEVL 334

Query: 2126 AYTVKP-SPYVEQDSSQTAIRGAGRQKADKSRKHELQSQDSLITDKPTDKMSEVSVSEVP 1950
            A  VK  S   +++  +T+ +G    K    + +  QS+ S ++ + + +  + S S   
Sbjct: 335  ASPVKSFSCDKKENVCETSSKGLPECKYSSPKSNNTQSKKSPVSCELSSRNLDPSSSMAC 394

Query: 1949 TDTSEPC--LVKSEGLKRKGDLEFQMQLEMALSATAVVNSHVSMASDAXXXXXXXXXXXX 1776
            +D SE C    KS+ LKRKGDLEF+MQLEMALSAT V  S  ++ SD             
Sbjct: 395  SDISEACHPKEKSQALKRKGDLEFEMQLEMALSATNVATSKSNICSDVKDLNSNSSTVLS 454

Query: 1775 SKRMKKIRKEESQTCSNGISTAIGSKKVGAPLYWAEVFCGGENLTGKWVHVDAVNAIIDG 1596
             KR+KKI   ES T   GISTA+GS+KVGAPLYWAEV+C GENLTGKWVHVDA NAIIDG
Sbjct: 455  VKRLKKIESGESSTSCLGISTAVGSRKVGAPLYWAEVYCSGENLTGKWVHVDAANAIIDG 514

Query: 1595 EHKVEAAAAACKKSLRYVVAFAGHGAKDVTRRYCTKWYKVAAQRINSTWWDAVLEPLKEL 1416
            E KVEAAAAACK SLRY+VAFAG GAKDVTRRYC KWY++A +R+NS WWDAVL PL+EL
Sbjct: 515  EQKVEAAAAACKTSLRYIVAFAGCGAKDVTRRYCMKWYRIAPKRVNSAWWDAVLAPLREL 574

Query: 1415 ESGATGGVVSVECEASCQKKVEVSQVEPSMSNSCGASMDSCEKKAT---------ESFMR 1263
            ESGATGG+  +E     ++ V  S +  ++  S     DS     +         ES  +
Sbjct: 575  ESGATGGMTQME-----KRHVNASNILEALKTSNYPYRDSFPNHVSLYGDSDLNVESSAK 629

Query: 1262 NSFASTRGSLEDMELETRALIEPLPTNQQAYRNHHLYVIERWLKKYEILYPKGPVLGFCS 1083
            +SF + R SLEDMELETRAL EPLPTNQQAY+NH LYVIERWL KY+ILYPKGP+LGFCS
Sbjct: 630  DSFVADRNSLEDMELETRALTEPLPTNQQAYKNHQLYVIERWLNKYQILYPKGPILGFCS 689

Query: 1082 GHSVYPRTCVQTLHTKERWLREGLQVKAGEVPVKVLKRSMKCSKEEAGDDNDYAEVDHQG 903
            GH+VYPR+CVQTL TKERWLRE LQVKA EVPVKV+K S K  K +  +  DY EVD +G
Sbjct: 690  GHAVYPRSCVQTLKTKERWLREALQVKANEVPVKVIKNSSKSKKGQDFEPEDYDEVDARG 749

Query: 902  ITSLYGKWQTEPLCLPRAVNGIVPKNERGQVDVWSEKCLPPGTIHLRLPRVATVARRLDI 723
               LYGKWQ EPL LP AVNGIVP+NERGQVDVWSEKCLPPGT+HLRLPRV +VA+RL+I
Sbjct: 750  NIELYGKWQLEPLRLPSAVNGIVPRNERGQVDVWSEKCLPPGTVHLRLPRVYSVAKRLEI 809

Query: 722  DFAPAMVGFDFRNGRSVPLFEGIVVCTEFKDAILXXXXXXXXXXXXXXXXXXXAQALSRW 543
            D APAMVGF+FRNGRS P+F+GIVVC EFKD IL                   AQA SRW
Sbjct: 810  DSAPAMVGFEFRNGRSTPVFDGIVVCAEFKDTILEAYAEEEEKREAEEKKRREAQATSRW 869

Query: 542  YQLLSSIITRKRLNECYGDGALPQSSIEIPKSGDKCYNSSATATATQKTEASPECQQVNI 363
            YQLLSSI+TR+RLN CYG+ +  QSS        K  NS+    ++Q    SP  Q    
Sbjct: 870  YQLLSSIVTRQRLNNCYGNNSTSQSSSNF--QNVKKTNSNVGVDSSQNDWQSPN-QVDRG 926

Query: 362  PEKLNAPSSMPTENHEHEFILDEKKVDEGGLTRIKRCHCGFSIQFEEL 219
              KL+APS   +E HEH ++++++  DE      KRCHCGF+IQ EEL
Sbjct: 927  DTKLHAPSPFQSEEHEHVYLIEDQSFDEENSVTTKRCHCGFTIQVEEL 974


>ref|XP_007032989.1| DNA repair protein xp-C / rad4, putative isoform 2 [Theobroma cacao]
            gi|508712018|gb|EOY03915.1| DNA repair protein xp-C /
            rad4, putative isoform 2 [Theobroma cacao]
          Length = 908

 Score =  813 bits (2100), Expect = 0.0
 Identities = 439/781 (56%), Positives = 537/781 (68%), Gaps = 25/781 (3%)
 Frame = -1

Query: 2486 THLHKIAEAPNLTASHLSPLVSWFHNNFHVRSPSVAEKSCHFALASTLETREGSPEAVAA 2307
            THL KI+   N+T++ LSPLV+WFHNNFHVRS   AE+S H ALA  LETREG+PE +AA
Sbjct: 131  THLSKISGVSNITSNALSPLVTWFHNNFHVRSLVRAERSFHTALAFALETREGTPEEIAA 190

Query: 2306 LSVALFRALNLTTRFVSILDVISLKPDADKSESSVADGCKNERDIFSSSTLMVAGPS--C 2133
            LSVALFRAL  T RFVSILDV SLKP+ADK E S  +  +    IFS+STLMVA P    
Sbjct: 191  LSVALFRALKFTARFVSILDVASLKPEADKCEPSSQEANRVGGGIFSTSTLMVANPKEVS 250

Query: 2132 SSAYTVKPSPYVEQDSS-QTAIRGAGRQKADKSRKHELQSQDSLITDKPTDKMSEVSVSE 1956
            SS+Y VK     E+D   + ++R + + K      ++ QS+ S   D+ TD+ S +   +
Sbjct: 251  SSSYPVKSFSCSEKDGHCENSLRSSCKSKGGCPTSNDTQSRYSTAVDEVTDRTSNLFACQ 310

Query: 1955 VPTDTSEPCL-VKSEGLKRKGDLEFQMQLEMALSATAV---VNSHVSMASDAXXXXXXXX 1788
               DT   C   KS+GLKRKGDLEF+MQL MA+SAT V    NS  S+            
Sbjct: 311  AQLDTYGQCAPTKSQGLKRKGDLEFEMQLAMAISATTVGTLENSAGSLDVSNFNGNNSLD 370

Query: 1787 XXXXSKRMKKIRKEESQTCSNGISTAIGSKKVGAPLYWAEVFCGGENLTGKWVHVDAVNA 1608
                SKR KKI + ES T S G+STA+GS+KVG+PL+WAEV+CGGENLTGKWVHVDA+NA
Sbjct: 371  ASTPSKRWKKIHRVESATSSQGLSTALGSRKVGSPLFWAEVYCGGENLTGKWVHVDALNA 430

Query: 1607 IIDGEHKVEAAAAACKKSLRYVVAFAGHGAKDVTRRYCTKWYKVAAQRINSTWWDAVLEP 1428
            IIDGE KVE AAAACK +LRYVVAFAG GAKDVTRRYC KWYK+A +R+NS WWDAVL P
Sbjct: 431  IIDGEQKVEDAAAACKTALRYVVAFAGRGAKDVTRRYCMKWYKIAPKRVNSIWWDAVLAP 490

Query: 1427 LKELESGATGGVVSVEC----EASCQKKVEVSQVEP-----SMSNSC--------GASMD 1299
            L+ELESGATGG +++E      ++ Q+K++ S +       S SN           A  +
Sbjct: 491  LRELESGATGGTINMEKLHNNASNEQEKIKASGMSEYPGTDSPSNHVILPEKSGQEAFKE 550

Query: 1298 SCEKKATESFMRNSFASTRGSLEDMELETRALIEPLPTNQQAYRNHHLYVIERWLKKYEI 1119
               K   ES  ++S  +TR SLEDMELETRAL EPLPTNQQAY+NH LY +ERWL K +I
Sbjct: 551  YGSKSEVESSTKHSLVATRNSLEDMELETRALTEPLPTNQQAYKNHALYALERWLTKCQI 610

Query: 1118 LYPKGPVLGFCSGHSVYPRTCVQTLHTKERWLREGLQVKAGEVPVKVLKRSMKCSKEEAG 939
            L+P+GP+LG+CSGH VYPRTCVQTL  +ERWLREGLQVK  E+P KVLKRS K  K +  
Sbjct: 611  LHPRGPILGYCSGHPVYPRTCVQTLKPRERWLREGLQVKGNEIPAKVLKRSAKLKKVQVS 670

Query: 938  DDNDYAEVDHQGITSLYGKWQTEPLCLPRAVNGIVPKNERGQVDVWSEKCLPPGTIHLRL 759
            +++DY E+D +G   LYGKWQ EPLCLP AV+GIVPKNERGQVDVWSEKCLPPGT+HLRL
Sbjct: 671  EEDDYEEIDSKGTIELYGKWQLEPLCLPHAVDGIVPKNERGQVDVWSEKCLPPGTVHLRL 730

Query: 758  PRVATVARRLDIDFAPAMVGFDFRNGRSVPLFEGIVVCTEFKDAILXXXXXXXXXXXXXX 579
            PRV +VA+RL+ID+APAMVGF+FRNGR+ P+F+GIVVC+EFKDAIL              
Sbjct: 731  PRVFSVAKRLEIDYAPAMVGFEFRNGRAAPIFDGIVVCSEFKDAILEAYAEEEERRVAEE 790

Query: 578  XXXXXAQALSRWYQLLSSIITRKRLNECYGDGALPQSSIEIPKSGDKCYNSSATATATQK 399
                 AQA+SRWYQLLSSIITR++L   YGDG+  Q+S  I    DK    +A   +++ 
Sbjct: 791  KKRNEAQAISRWYQLLSSIITRQKLKSYYGDGSSSQASRNIQ---DKNNEINAPDESSKD 847

Query: 398  TEASPECQQVNIPEKL-NAPSSMPTENHEHEFILDEKKVDEGGLTRIKRCHCGFSIQFEE 222
               S    + +  + L N PS    E+HEH F+ + +  D     R KRCHCGFSIQ EE
Sbjct: 848  DRQSTGLWKGDGEDTLCNIPSGTLVEDHEHVFLRENESFDAENSVRTKRCHCGFSIQVEE 907

Query: 221  L 219
            L
Sbjct: 908  L 908


>ref|XP_006482097.1| PREDICTED: DNA repair protein RAD4 isoform X2 [Citrus sinensis]
          Length = 954

 Score =  815 bits (2104), Expect = 0.0
 Identities = 439/765 (57%), Positives = 530/765 (69%), Gaps = 9/765 (1%)
 Frame = -1

Query: 2486 THLHKIAEAPNLTASHLSPLVSWFHNNFHVRSPSVAEKSCHFALASTLETREGSPEAVAA 2307
            ++L KI+E   LTA+ LSP+VSWFH+NFHVRS     +S H ALA  LE+REG+PE +AA
Sbjct: 195  SYLLKISEVSKLTANALSPIVSWFHDNFHVRSSVSTRRSFHSALAHALESREGTPEEIAA 254

Query: 2306 LSVALFRALNLTTRFVSILDVISLKPDADKSESSVADGCKNERDIFSSSTLMVAGPSCSS 2127
            LSVALFRAL LTTRFVSILDV SLKP+ADK+ SS  D  +    IF++ TLMVA P    
Sbjct: 255  LSVALFRALKLTTRFVSILDVASLKPEADKNVSSNQDSSRVGGGIFNAPTLMVAKPEEVL 314

Query: 2126 AYTVKP-SPYVEQDSSQTAIRGAGRQKADKSRKHELQSQDSLITDKPTDKMSEVSVSEVP 1950
            A  VK  S   +++  +T+ +G+   K    + +  QS+ S ++ + + +  + S S   
Sbjct: 315  ASPVKSFSCDKKENVCETSSKGSPEYKYSSPKSNNTQSKKSPVSRELSSRNLDPSSSMAC 374

Query: 1949 TDTSEPC--LVKSEGLKRKGDLEFQMQLEMALSATAVVNSHVSMASDAXXXXXXXXXXXX 1776
            +D SE C    KS+ LKRKGDLEF+MQLEMALSAT V  S  ++ SD             
Sbjct: 375  SDISEACHPKEKSQALKRKGDLEFEMQLEMALSATNVGTSKSNICSDVKDLNSNSSTVLP 434

Query: 1775 SKRMKKIRKEESQTCSNGISTAIGSKKVGAPLYWAEVFCGGENLTGKWVHVDAVNAIIDG 1596
             KR+KKI   ES T   GISTA+GS+KVGAPLYWAEV+C GENLTGKWVHVDA NAIIDG
Sbjct: 435  VKRLKKIESGESSTSCLGISTAVGSRKVGAPLYWAEVYCSGENLTGKWVHVDAANAIIDG 494

Query: 1595 EHKVEAAAAACKKSLRYVVAFAGHGAKDVTRRYCTKWYKVAAQRINSTWWDAVLEPLKEL 1416
            E KVEAAAAACK SLRY+VAFAG GAKDVTRRYC KWY++A++R+NS WWDAVL PL+EL
Sbjct: 495  EQKVEAAAAACKTSLRYIVAFAGCGAKDVTRRYCMKWYRIASKRVNSAWWDAVLAPLREL 554

Query: 1415 ESGATGGVVSVECE-ASCQKKVEVSQVE-----PSMSNSCGASMDSCEKKATESFMRNSF 1254
            ESGATGG+  +E    +    +E  +        S  N    S DS      ES  ++SF
Sbjct: 555  ESGATGGMTQMEMRHVNASNTLEALKTSNYPYRDSFPNHVSLSGDS--DLNVESSAKDSF 612

Query: 1253 ASTRGSLEDMELETRALIEPLPTNQQAYRNHHLYVIERWLKKYEILYPKGPVLGFCSGHS 1074
             + R SLEDMELETRAL EPLPTNQQAY+NH LYVIERWL KY+ILYPKGP+LGFCSGH+
Sbjct: 613  VADRNSLEDMELETRALTEPLPTNQQAYKNHQLYVIERWLNKYQILYPKGPILGFCSGHA 672

Query: 1073 VYPRTCVQTLHTKERWLREGLQVKAGEVPVKVLKRSMKCSKEEAGDDNDYAEVDHQGITS 894
            VYPR+CVQTL TKERWL+E LQVKA EVPVKV+K S K ++ +  +  DY EVD +G   
Sbjct: 673  VYPRSCVQTLKTKERWLQEALQVKATEVPVKVIKNSSKSNRGQDFEPEDYDEVDARGNIE 732

Query: 893  LYGKWQTEPLCLPRAVNGIVPKNERGQVDVWSEKCLPPGTIHLRLPRVATVARRLDIDFA 714
            LYGKWQ EPL LP AVNGIVP+NERGQVDVWSEKCLPPGT+HLRLPRV +VA+RL+ID A
Sbjct: 733  LYGKWQLEPLRLPSAVNGIVPRNERGQVDVWSEKCLPPGTVHLRLPRVYSVAKRLEIDSA 792

Query: 713  PAMVGFDFRNGRSVPLFEGIVVCTEFKDAILXXXXXXXXXXXXXXXXXXXAQALSRWYQL 534
            PAMVGF+FRNGRS P+F+GIVVC EFKD IL                   AQA SRWYQL
Sbjct: 793  PAMVGFEFRNGRSTPVFDGIVVCVEFKDTILEAYAEEEEKREAEEKKRREAQATSRWYQL 852

Query: 533  LSSIITRKRLNECYGDGALPQSSIEIPKSGDKCYNSSATATATQKTEASPECQQVNIPEK 354
            LSSI+TR+RLN CYG+ +  QSS        K  NS+    ++Q    SP  Q      K
Sbjct: 853  LSSIVTRQRLNNCYGNNSTSQSSSNF--QNVKKTNSNVGVDSSQNDWQSPN-QIDKGDTK 909

Query: 353  LNAPSSMPTENHEHEFILDEKKVDEGGLTRIKRCHCGFSIQFEEL 219
            L+APS   +E HEH ++++++  DE      KRCHCGF+IQ EEL
Sbjct: 910  LHAPSPAQSEEHEHVYLIEDQSFDEENSVTTKRCHCGFTIQVEEL 954


>ref|XP_006482096.1| PREDICTED: DNA repair protein RAD4 isoform X1 [Citrus sinensis]
          Length = 974

 Score =  815 bits (2104), Expect = 0.0
 Identities = 439/765 (57%), Positives = 530/765 (69%), Gaps = 9/765 (1%)
 Frame = -1

Query: 2486 THLHKIAEAPNLTASHLSPLVSWFHNNFHVRSPSVAEKSCHFALASTLETREGSPEAVAA 2307
            ++L KI+E   LTA+ LSP+VSWFH+NFHVRS     +S H ALA  LE+REG+PE +AA
Sbjct: 215  SYLLKISEVSKLTANALSPIVSWFHDNFHVRSSVSTRRSFHSALAHALESREGTPEEIAA 274

Query: 2306 LSVALFRALNLTTRFVSILDVISLKPDADKSESSVADGCKNERDIFSSSTLMVAGPSCSS 2127
            LSVALFRAL LTTRFVSILDV SLKP+ADK+ SS  D  +    IF++ TLMVA P    
Sbjct: 275  LSVALFRALKLTTRFVSILDVASLKPEADKNVSSNQDSSRVGGGIFNAPTLMVAKPEEVL 334

Query: 2126 AYTVKP-SPYVEQDSSQTAIRGAGRQKADKSRKHELQSQDSLITDKPTDKMSEVSVSEVP 1950
            A  VK  S   +++  +T+ +G+   K    + +  QS+ S ++ + + +  + S S   
Sbjct: 335  ASPVKSFSCDKKENVCETSSKGSPEYKYSSPKSNNTQSKKSPVSRELSSRNLDPSSSMAC 394

Query: 1949 TDTSEPC--LVKSEGLKRKGDLEFQMQLEMALSATAVVNSHVSMASDAXXXXXXXXXXXX 1776
            +D SE C    KS+ LKRKGDLEF+MQLEMALSAT V  S  ++ SD             
Sbjct: 395  SDISEACHPKEKSQALKRKGDLEFEMQLEMALSATNVGTSKSNICSDVKDLNSNSSTVLP 454

Query: 1775 SKRMKKIRKEESQTCSNGISTAIGSKKVGAPLYWAEVFCGGENLTGKWVHVDAVNAIIDG 1596
             KR+KKI   ES T   GISTA+GS+KVGAPLYWAEV+C GENLTGKWVHVDA NAIIDG
Sbjct: 455  VKRLKKIESGESSTSCLGISTAVGSRKVGAPLYWAEVYCSGENLTGKWVHVDAANAIIDG 514

Query: 1595 EHKVEAAAAACKKSLRYVVAFAGHGAKDVTRRYCTKWYKVAAQRINSTWWDAVLEPLKEL 1416
            E KVEAAAAACK SLRY+VAFAG GAKDVTRRYC KWY++A++R+NS WWDAVL PL+EL
Sbjct: 515  EQKVEAAAAACKTSLRYIVAFAGCGAKDVTRRYCMKWYRIASKRVNSAWWDAVLAPLREL 574

Query: 1415 ESGATGGVVSVECE-ASCQKKVEVSQVE-----PSMSNSCGASMDSCEKKATESFMRNSF 1254
            ESGATGG+  +E    +    +E  +        S  N    S DS      ES  ++SF
Sbjct: 575  ESGATGGMTQMEMRHVNASNTLEALKTSNYPYRDSFPNHVSLSGDS--DLNVESSAKDSF 632

Query: 1253 ASTRGSLEDMELETRALIEPLPTNQQAYRNHHLYVIERWLKKYEILYPKGPVLGFCSGHS 1074
             + R SLEDMELETRAL EPLPTNQQAY+NH LYVIERWL KY+ILYPKGP+LGFCSGH+
Sbjct: 633  VADRNSLEDMELETRALTEPLPTNQQAYKNHQLYVIERWLNKYQILYPKGPILGFCSGHA 692

Query: 1073 VYPRTCVQTLHTKERWLREGLQVKAGEVPVKVLKRSMKCSKEEAGDDNDYAEVDHQGITS 894
            VYPR+CVQTL TKERWL+E LQVKA EVPVKV+K S K ++ +  +  DY EVD +G   
Sbjct: 693  VYPRSCVQTLKTKERWLQEALQVKATEVPVKVIKNSSKSNRGQDFEPEDYDEVDARGNIE 752

Query: 893  LYGKWQTEPLCLPRAVNGIVPKNERGQVDVWSEKCLPPGTIHLRLPRVATVARRLDIDFA 714
            LYGKWQ EPL LP AVNGIVP+NERGQVDVWSEKCLPPGT+HLRLPRV +VA+RL+ID A
Sbjct: 753  LYGKWQLEPLRLPSAVNGIVPRNERGQVDVWSEKCLPPGTVHLRLPRVYSVAKRLEIDSA 812

Query: 713  PAMVGFDFRNGRSVPLFEGIVVCTEFKDAILXXXXXXXXXXXXXXXXXXXAQALSRWYQL 534
            PAMVGF+FRNGRS P+F+GIVVC EFKD IL                   AQA SRWYQL
Sbjct: 813  PAMVGFEFRNGRSTPVFDGIVVCVEFKDTILEAYAEEEEKREAEEKKRREAQATSRWYQL 872

Query: 533  LSSIITRKRLNECYGDGALPQSSIEIPKSGDKCYNSSATATATQKTEASPECQQVNIPEK 354
            LSSI+TR+RLN CYG+ +  QSS        K  NS+    ++Q    SP  Q      K
Sbjct: 873  LSSIVTRQRLNNCYGNNSTSQSSSNF--QNVKKTNSNVGVDSSQNDWQSPN-QIDKGDTK 929

Query: 353  LNAPSSMPTENHEHEFILDEKKVDEGGLTRIKRCHCGFSIQFEEL 219
            L+APS   +E HEH ++++++  DE      KRCHCGF+IQ EEL
Sbjct: 930  LHAPSPAQSEEHEHVYLIEDQSFDEENSVTTKRCHCGFTIQVEEL 974


>ref|XP_011007252.1| PREDICTED: DNA repair protein complementing XP-C cells homolog
            isoform X2 [Populus euphratica]
          Length = 847

 Score =  809 bits (2090), Expect = 0.0
 Identities = 438/765 (57%), Positives = 529/765 (69%), Gaps = 10/765 (1%)
 Frame = -1

Query: 2483 HLHKIAEAPNLTASHLSPLVSWFHNNFHVRSPSVAEKSCHFALASTLETREGSPEAVAAL 2304
            HL    E   L A  LSPL  WFHNNFHV S    ++S H AL+  LETREG+ E +AAL
Sbjct: 93   HLSNTLEDSKLHAKALSPLAHWFHNNFHVVSSVSEKRSFHSALSCALETREGTLEELAAL 152

Query: 2303 SVALFRALNLTTRFVSILDVISLKPDADKSESSVADGCKNERDIFSSSTLMVAGPSCSSA 2124
            SVALFRAL LTTRFVSILDV S+KPDADK ES   D  K  R IFS+STLMV  P     
Sbjct: 153  SVALFRALKLTTRFVSILDVASIKPDADKYESLNQDTSKMRRGIFSTSTLMVDRPKEVFI 212

Query: 2123 YTVKPSPYVEQDSSQTAIRGAGRQKADKSRKHELQSQDSLITDKPTDKMSEVSVSEVPTD 1944
                PS   +++ ++T+ + + + K + SR  ++QS DS    +  DKM +V   EV  +
Sbjct: 213  PPKSPSCSEKKNVAETSSKASCKSKDNCSRSKKIQSNDSPPAVELKDKMVDVFPCEVQNN 272

Query: 1943 TSEPCLVK-SEGLKRKGDLEFQMQLEMALSATAVVNSHVSMASDAXXXXXXXXXXXXSKR 1767
            TSE C+ K S+G KRKGDLEF+MQL+MA+SATAV                        KR
Sbjct: 273  TSEECVTKKSQGSKRKGDLEFEMQLQMAMSATAVATQSNKELDVKESNSNSSDVSSPFKR 332

Query: 1766 MKKIRKEESQTCSNGISTAIGSKKVGAPLYWAEVFCGGENLTGKWVHVDAVNAIIDGEHK 1587
            ++K   EES   S GISTA+GS+K+G+PLYWAEV+C GENLTGKWVHVDAV+ I+DGE K
Sbjct: 333  IRKNANEESS--SQGISTALGSRKIGSPLYWAEVYCSGENLTGKWVHVDAVHDIVDGEQK 390

Query: 1586 VEAAAAACKKSLRYVVAFAGHGAKDVTRRYCTKWYKVAAQRINSTWWDAVLEPLKELESG 1407
            VEAAA ACK SLRYVVAFAG GAKDVTRRYC KWYK+A+QR+NS WWDAVL PL+ELESG
Sbjct: 391  VEAAADACKTSLRYVVAFAGLGAKDVTRRYCMKWYKIASQRVNSHWWDAVLAPLRELESG 450

Query: 1406 ATGGVVSVE---CEASCQKKVEVSQ--VEPSMSNSCGASMD----SCEKKATESFMRNSF 1254
            ATGG+  +E     AS + +  ++    +  M N   +++D    S  K   ES  RNSF
Sbjct: 451  ATGGMAHLEKPHANASNEHENVIASGLSDLPMPNELPSNVDLPKESGRKNDVESSGRNSF 510

Query: 1253 ASTRGSLEDMELETRALIEPLPTNQQAYRNHHLYVIERWLKKYEILYPKGPVLGFCSGHS 1074
            A+TR ++EDMELETRAL EPLPTNQQAY+NH LY IE+WL K +IL+PKGP+LGFCSGH 
Sbjct: 511  AATRNTIEDMELETRALTEPLPTNQQAYKNHSLYAIEKWLTKCQILHPKGPILGFCSGHP 570

Query: 1073 VYPRTCVQTLHTKERWLREGLQVKAGEVPVKVLKRSMKCSKEEAGDDNDYAEVDHQGITS 894
            VYPR CVQTL TKERWLREG+QVKA E+P KV+K+S K  K +  +D+DY E D  G+  
Sbjct: 571  VYPRACVQTLRTKERWLREGMQVKAKELPAKVVKQSGKLKKVQFSEDDDYGETD-SGVVE 629

Query: 893  LYGKWQTEPLCLPRAVNGIVPKNERGQVDVWSEKCLPPGTIHLRLPRVATVARRLDIDFA 714
            LYG WQ EPL LP AVNGIVPKNERGQVDVWSEKCLPPGT+HLRLPRV  VA+RL+ID+A
Sbjct: 630  LYGMWQLEPLQLPHAVNGIVPKNERGQVDVWSEKCLPPGTVHLRLPRVFYVAKRLEIDYA 689

Query: 713  PAMVGFDFRNGRSVPLFEGIVVCTEFKDAILXXXXXXXXXXXXXXXXXXXAQALSRWYQL 534
            PAMVGF+FRNGRSVP+F+GIVVC EFKDAIL                   AQA+SRWYQL
Sbjct: 690  PAMVGFEFRNGRSVPVFDGIVVCNEFKDAILEAYAEEEERRDAEEKKRNEAQAISRWYQL 749

Query: 533  LSSIITRKRLNECYGDGALPQSSIEIPKSGDKCYNSSATATATQKTEASPECQQVNIPEK 354
            LSSIITR+RLN  YG+G LPQ    +  + ++         +TQ     P  Q+ +   K
Sbjct: 750  LSSIITRQRLNNSYGNGLLPQMPSNVENTNNQ---PDVHVGSTQ----PPGHQKDSKDRK 802

Query: 353  LNAPSSMPTENHEHEFILDEKKVDEGGLTRIKRCHCGFSIQFEEL 219
            LNAPS   T++HEH F+++++  DE   TR KRCHCGFS+Q EEL
Sbjct: 803  LNAPSMTLTDDHEHVFLVEDQSFDEQTSTRTKRCHCGFSVQVEEL 847


>ref|XP_007032988.1| DNA repair protein xp-C / rad4, putative isoform 1 [Theobroma cacao]
            gi|508712017|gb|EOY03914.1| DNA repair protein xp-C /
            rad4, putative isoform 1 [Theobroma cacao]
          Length = 974

 Score =  813 bits (2100), Expect = 0.0
 Identities = 439/781 (56%), Positives = 537/781 (68%), Gaps = 25/781 (3%)
 Frame = -1

Query: 2486 THLHKIAEAPNLTASHLSPLVSWFHNNFHVRSPSVAEKSCHFALASTLETREGSPEAVAA 2307
            THL KI+   N+T++ LSPLV+WFHNNFHVRS   AE+S H ALA  LETREG+PE +AA
Sbjct: 197  THLSKISGVSNITSNALSPLVTWFHNNFHVRSLVRAERSFHTALAFALETREGTPEEIAA 256

Query: 2306 LSVALFRALNLTTRFVSILDVISLKPDADKSESSVADGCKNERDIFSSSTLMVAGPS--C 2133
            LSVALFRAL  T RFVSILDV SLKP+ADK E S  +  +    IFS+STLMVA P    
Sbjct: 257  LSVALFRALKFTARFVSILDVASLKPEADKCEPSSQEANRVGGGIFSTSTLMVANPKEVS 316

Query: 2132 SSAYTVKPSPYVEQDSS-QTAIRGAGRQKADKSRKHELQSQDSLITDKPTDKMSEVSVSE 1956
            SS+Y VK     E+D   + ++R + + K      ++ QS+ S   D+ TD+ S +   +
Sbjct: 317  SSSYPVKSFSCSEKDGHCENSLRSSCKSKGGCPTSNDTQSRYSTAVDEVTDRTSNLFACQ 376

Query: 1955 VPTDTSEPCL-VKSEGLKRKGDLEFQMQLEMALSATAV---VNSHVSMASDAXXXXXXXX 1788
               DT   C   KS+GLKRKGDLEF+MQL MA+SAT V    NS  S+            
Sbjct: 377  AQLDTYGQCAPTKSQGLKRKGDLEFEMQLAMAISATTVGTLENSAGSLDVSNFNGNNSLD 436

Query: 1787 XXXXSKRMKKIRKEESQTCSNGISTAIGSKKVGAPLYWAEVFCGGENLTGKWVHVDAVNA 1608
                SKR KKI + ES T S G+STA+GS+KVG+PL+WAEV+CGGENLTGKWVHVDA+NA
Sbjct: 437  ASTPSKRWKKIHRVESATSSQGLSTALGSRKVGSPLFWAEVYCGGENLTGKWVHVDALNA 496

Query: 1607 IIDGEHKVEAAAAACKKSLRYVVAFAGHGAKDVTRRYCTKWYKVAAQRINSTWWDAVLEP 1428
            IIDGE KVE AAAACK +LRYVVAFAG GAKDVTRRYC KWYK+A +R+NS WWDAVL P
Sbjct: 497  IIDGEQKVEDAAAACKTALRYVVAFAGRGAKDVTRRYCMKWYKIAPKRVNSIWWDAVLAP 556

Query: 1427 LKELESGATGGVVSVEC----EASCQKKVEVSQVEP-----SMSNSC--------GASMD 1299
            L+ELESGATGG +++E      ++ Q+K++ S +       S SN           A  +
Sbjct: 557  LRELESGATGGTINMEKLHNNASNEQEKIKASGMSEYPGTDSPSNHVILPEKSGQEAFKE 616

Query: 1298 SCEKKATESFMRNSFASTRGSLEDMELETRALIEPLPTNQQAYRNHHLYVIERWLKKYEI 1119
               K   ES  ++S  +TR SLEDMELETRAL EPLPTNQQAY+NH LY +ERWL K +I
Sbjct: 617  YGSKSEVESSTKHSLVATRNSLEDMELETRALTEPLPTNQQAYKNHALYALERWLTKCQI 676

Query: 1118 LYPKGPVLGFCSGHSVYPRTCVQTLHTKERWLREGLQVKAGEVPVKVLKRSMKCSKEEAG 939
            L+P+GP+LG+CSGH VYPRTCVQTL  +ERWLREGLQVK  E+P KVLKRS K  K +  
Sbjct: 677  LHPRGPILGYCSGHPVYPRTCVQTLKPRERWLREGLQVKGNEIPAKVLKRSAKLKKVQVS 736

Query: 938  DDNDYAEVDHQGITSLYGKWQTEPLCLPRAVNGIVPKNERGQVDVWSEKCLPPGTIHLRL 759
            +++DY E+D +G   LYGKWQ EPLCLP AV+GIVPKNERGQVDVWSEKCLPPGT+HLRL
Sbjct: 737  EEDDYEEIDSKGTIELYGKWQLEPLCLPHAVDGIVPKNERGQVDVWSEKCLPPGTVHLRL 796

Query: 758  PRVATVARRLDIDFAPAMVGFDFRNGRSVPLFEGIVVCTEFKDAILXXXXXXXXXXXXXX 579
            PRV +VA+RL+ID+APAMVGF+FRNGR+ P+F+GIVVC+EFKDAIL              
Sbjct: 797  PRVFSVAKRLEIDYAPAMVGFEFRNGRAAPIFDGIVVCSEFKDAILEAYAEEEERRVAEE 856

Query: 578  XXXXXAQALSRWYQLLSSIITRKRLNECYGDGALPQSSIEIPKSGDKCYNSSATATATQK 399
                 AQA+SRWYQLLSSIITR++L   YGDG+  Q+S  I    DK    +A   +++ 
Sbjct: 857  KKRNEAQAISRWYQLLSSIITRQKLKSYYGDGSSSQASRNIQ---DKNNEINAPDESSKD 913

Query: 398  TEASPECQQVNIPEKL-NAPSSMPTENHEHEFILDEKKVDEGGLTRIKRCHCGFSIQFEE 222
               S    + +  + L N PS    E+HEH F+ + +  D     R KRCHCGFSIQ EE
Sbjct: 914  DRQSTGLWKGDGEDTLCNIPSGTLVEDHEHVFLRENESFDAENSVRTKRCHCGFSIQVEE 973

Query: 221  L 219
            L
Sbjct: 974  L 974


>ref|XP_009789278.1| PREDICTED: DNA repair protein complementing XP-C cells homolog
            [Nicotiana sylvestris]
          Length = 932

 Score =  808 bits (2088), Expect = 0.0
 Identities = 440/757 (58%), Positives = 519/757 (68%), Gaps = 2/757 (0%)
 Frame = -1

Query: 2483 HLHKIAEAPNLTASHLSPLVSWFHNNFHVRSPSVAEKSCHFALASTLETREGSPEAVAAL 2304
            HL K+ + P LTA  L+PLVSWFH++F VR  S  EKS H ALASTLE++EG+ E VAAL
Sbjct: 230  HLLKLTDVPELTAKALTPLVSWFHSHFRVRGASDTEKSFHSALASTLESQEGTSEEVAAL 289

Query: 2303 SVALFRALNLTTRFVSILDVISLKPDADKSESSVADGCKNERDIFSSSTLMVAGPSCSSA 2124
            SVALFRALNLTTRFVSILDV SLKP+ +K   S     K    IF+SSTLMVA P  S  
Sbjct: 290  SVALFRALNLTTRFVSILDVASLKPEIEKLYPSGQSPSKAGSGIFNSSTLMVAAPKYSPL 349

Query: 2123 YTVKPSPYVEQDSSQTAIRGAGRQKADKSRKHELQSQDSLITDKPTDKMSEVSVSEVPTD 1944
               K                 G+    KSR        + ITDK +DK    S S+   D
Sbjct: 350  SPAKSL-------------ADGKHNNGKSR--------ATITDK-SDKRMSPSTSDAQRD 387

Query: 1943 TSEPCLVKSEGLKRKGDLEFQMQLEMALSATAVVNSHVSMASDAXXXXXXXXXXXXSKRM 1764
             ++ C++KSE  KRKGDLEF+MQLEMALS+TAV     +M S+              K+ 
Sbjct: 388  ANDECIMKSERPKRKGDLEFEMQLEMALSSTAVEIVRNTMVSELADVQSTSSNVSPFKK- 446

Query: 1763 KKIRKEESQTCSNGISTAIGSKKVGAPLYWAEVFCGGENLTGKWVHVDAVNAIIDGEHKV 1584
            KKI+ EE  T S+GISTA+GS+KVGAPLYWAEV+C GENLTGKWVHVD VNAI DGE  V
Sbjct: 447  KKIKAEECSTSSHGISTAVGSRKVGAPLYWAEVYCSGENLTGKWVHVDVVNAITDGEQNV 506

Query: 1583 EAAAAACKKSLRYVVAFAGHGAKDVTRRYCTKWYKVAAQRINSTWWDAVLEPLKELESGA 1404
            EAAAAACK  LRYVVAFAG+GAKDVTRRYCTKWYK+A++R+NS WWDAVL PLKELES A
Sbjct: 507  EAAAAACKLHLRYVVAFAGNGAKDVTRRYCTKWYKIASERVNSIWWDAVLAPLKELESVA 566

Query: 1403 TGGVVSVECEASCQ-KKVEVSQVEPSMSNSCGASMDSCEKKATESFMRNSFASTRGSLED 1227
            T  VV +  E S + KK EV+Q                              +TR SLED
Sbjct: 567  TSDVVHLRRETSDESKKREVAQS----------------------------TATRSSLED 598

Query: 1226 MELETRALIEPLPTNQQAYRNHHLYVIERWLKKYEILYPKGPVLGFCSGHSVYPRTCVQT 1047
            MELETRAL EPLPTNQQAYRNH LY+IERWL KY+ILYPKGPVLGFCSGH VYPR+CVQT
Sbjct: 599  MELETRALTEPLPTNQQAYRNHRLYIIERWLNKYQILYPKGPVLGFCSGHPVYPRSCVQT 658

Query: 1046 LHTKERWLREGLQVKAGEVPVKVLKRSMKCSKEEAGDDNDYAEVDHQGITSLYGKWQTEP 867
            L  KE+W REGLQVKA E+P KVLK S K +KE+   D+DY E D  G  +LYG+WQTEP
Sbjct: 659  LKRKEKWFREGLQVKANEIPAKVLKHSGKQNKEQDVKDDDYGEEDCGGTVALYGQWQTEP 718

Query: 866  LCLPRAVNGIVPKNERGQVDVWSEKCLPPGTIHLRLPRVATVARRLDIDFAPAMVGFDFR 687
            L LP AVNGIVPKN RGQVDVWSEKCLPPGT+HLRLPR+  VA+RL+IDFAPAMVGF+FR
Sbjct: 719  LFLPPAVNGIVPKNGRGQVDVWSEKCLPPGTVHLRLPRLVPVAKRLEIDFAPAMVGFEFR 778

Query: 686  NGRSVPLFEGIVVCTEFKDAILXXXXXXXXXXXXXXXXXXXAQALSRWYQLLSSIITRKR 507
            NGRS+P++EGIVVCTEFKDAIL                   A+ALSRWYQLL+S+ITR+R
Sbjct: 779  NGRSLPVYEGIVVCTEFKDAILETYAEEEERRQAKERKRSEAEALSRWYQLLASLITRQR 838

Query: 506  LNECYGDGALPQSSIEIPKSGDKCYNSSATATATQKTEASPECQQVNIP-EKLNAPSSMP 330
            L+ CY DGA  QS++    S DK   SS  A   + T+ +PE QQ      + ++P ++ 
Sbjct: 839  LHNCYVDGASSQSAVNFATSNDK---SSLLARDAEDTKKTPEYQQEKSEIAQSDSPPTVL 895

Query: 329  TENHEHEFILDEKKVDEGGLTRIKRCHCGFSIQFEEL 219
             E+H H F+++++ VDE   TR KRC CGFS+Q+EEL
Sbjct: 896  AEDHAHVFVVEDQTVDEESSTRTKRCRCGFSVQYEEL 932


>ref|XP_011007251.1| PREDICTED: DNA repair protein complementing XP-C cells homolog
            isoform X1 [Populus euphratica]
          Length = 966

 Score =  809 bits (2090), Expect = 0.0
 Identities = 438/765 (57%), Positives = 529/765 (69%), Gaps = 10/765 (1%)
 Frame = -1

Query: 2483 HLHKIAEAPNLTASHLSPLVSWFHNNFHVRSPSVAEKSCHFALASTLETREGSPEAVAAL 2304
            HL    E   L A  LSPL  WFHNNFHV S    ++S H AL+  LETREG+ E +AAL
Sbjct: 212  HLSNTLEDSKLHAKALSPLAHWFHNNFHVVSSVSEKRSFHSALSCALETREGTLEELAAL 271

Query: 2303 SVALFRALNLTTRFVSILDVISLKPDADKSESSVADGCKNERDIFSSSTLMVAGPSCSSA 2124
            SVALFRAL LTTRFVSILDV S+KPDADK ES   D  K  R IFS+STLMV  P     
Sbjct: 272  SVALFRALKLTTRFVSILDVASIKPDADKYESLNQDTSKMRRGIFSTSTLMVDRPKEVFI 331

Query: 2123 YTVKPSPYVEQDSSQTAIRGAGRQKADKSRKHELQSQDSLITDKPTDKMSEVSVSEVPTD 1944
                PS   +++ ++T+ + + + K + SR  ++QS DS    +  DKM +V   EV  +
Sbjct: 332  PPKSPSCSEKKNVAETSSKASCKSKDNCSRSKKIQSNDSPPAVELKDKMVDVFPCEVQNN 391

Query: 1943 TSEPCLVK-SEGLKRKGDLEFQMQLEMALSATAVVNSHVSMASDAXXXXXXXXXXXXSKR 1767
            TSE C+ K S+G KRKGDLEF+MQL+MA+SATAV                        KR
Sbjct: 392  TSEECVTKKSQGSKRKGDLEFEMQLQMAMSATAVATQSNKELDVKESNSNSSDVSSPFKR 451

Query: 1766 MKKIRKEESQTCSNGISTAIGSKKVGAPLYWAEVFCGGENLTGKWVHVDAVNAIIDGEHK 1587
            ++K   EES   S GISTA+GS+K+G+PLYWAEV+C GENLTGKWVHVDAV+ I+DGE K
Sbjct: 452  IRKNANEESS--SQGISTALGSRKIGSPLYWAEVYCSGENLTGKWVHVDAVHDIVDGEQK 509

Query: 1586 VEAAAAACKKSLRYVVAFAGHGAKDVTRRYCTKWYKVAAQRINSTWWDAVLEPLKELESG 1407
            VEAAA ACK SLRYVVAFAG GAKDVTRRYC KWYK+A+QR+NS WWDAVL PL+ELESG
Sbjct: 510  VEAAADACKTSLRYVVAFAGLGAKDVTRRYCMKWYKIASQRVNSHWWDAVLAPLRELESG 569

Query: 1406 ATGGVVSVE---CEASCQKKVEVSQ--VEPSMSNSCGASMD----SCEKKATESFMRNSF 1254
            ATGG+  +E     AS + +  ++    +  M N   +++D    S  K   ES  RNSF
Sbjct: 570  ATGGMAHLEKPHANASNEHENVIASGLSDLPMPNELPSNVDLPKESGRKNDVESSGRNSF 629

Query: 1253 ASTRGSLEDMELETRALIEPLPTNQQAYRNHHLYVIERWLKKYEILYPKGPVLGFCSGHS 1074
            A+TR ++EDMELETRAL EPLPTNQQAY+NH LY IE+WL K +IL+PKGP+LGFCSGH 
Sbjct: 630  AATRNTIEDMELETRALTEPLPTNQQAYKNHSLYAIEKWLTKCQILHPKGPILGFCSGHP 689

Query: 1073 VYPRTCVQTLHTKERWLREGLQVKAGEVPVKVLKRSMKCSKEEAGDDNDYAEVDHQGITS 894
            VYPR CVQTL TKERWLREG+QVKA E+P KV+K+S K  K +  +D+DY E D  G+  
Sbjct: 690  VYPRACVQTLRTKERWLREGMQVKAKELPAKVVKQSGKLKKVQFSEDDDYGETD-SGVVE 748

Query: 893  LYGKWQTEPLCLPRAVNGIVPKNERGQVDVWSEKCLPPGTIHLRLPRVATVARRLDIDFA 714
            LYG WQ EPL LP AVNGIVPKNERGQVDVWSEKCLPPGT+HLRLPRV  VA+RL+ID+A
Sbjct: 749  LYGMWQLEPLQLPHAVNGIVPKNERGQVDVWSEKCLPPGTVHLRLPRVFYVAKRLEIDYA 808

Query: 713  PAMVGFDFRNGRSVPLFEGIVVCTEFKDAILXXXXXXXXXXXXXXXXXXXAQALSRWYQL 534
            PAMVGF+FRNGRSVP+F+GIVVC EFKDAIL                   AQA+SRWYQL
Sbjct: 809  PAMVGFEFRNGRSVPVFDGIVVCNEFKDAILEAYAEEEERRDAEEKKRNEAQAISRWYQL 868

Query: 533  LSSIITRKRLNECYGDGALPQSSIEIPKSGDKCYNSSATATATQKTEASPECQQVNIPEK 354
            LSSIITR+RLN  YG+G LPQ    +  + ++         +TQ     P  Q+ +   K
Sbjct: 869  LSSIITRQRLNNSYGNGLLPQMPSNVENTNNQ---PDVHVGSTQ----PPGHQKDSKDRK 921

Query: 353  LNAPSSMPTENHEHEFILDEKKVDEGGLTRIKRCHCGFSIQFEEL 219
            LNAPS   T++HEH F+++++  DE   TR KRCHCGFS+Q EEL
Sbjct: 922  LNAPSMTLTDDHEHVFLVEDQSFDEQTSTRTKRCHCGFSVQVEEL 966


>gb|KDO50783.1| hypothetical protein CISIN_1g002340mg [Citrus sinensis]
          Length = 833

 Score =  801 bits (2068), Expect = 0.0
 Identities = 432/759 (56%), Positives = 515/759 (67%), Gaps = 3/759 (0%)
 Frame = -1

Query: 2486 THLHKIAEAPNLTASHLSPLVSWFHNNFHVRSPSVAEKSCHFALASTLETREGSPEAVAA 2307
            ++L KI+E   LTA+ LSP+VSWFH+NFHVRS     +S H  LA  LE+REG+PE +AA
Sbjct: 114  SYLLKISEVSKLTANALSPIVSWFHDNFHVRSSVSTRRSFHSDLAHALESREGTPEEIAA 173

Query: 2306 LSVALFRALNLTTRFVSILDVISLKPDADKSESSVADGCKNERDIFSSSTLMVAGPSCSS 2127
            LSVALFRAL LTTRFVSILDV SLKP+ADK+ SS  D  +    IF++ TLMVA P    
Sbjct: 174  LSVALFRALKLTTRFVSILDVASLKPEADKNVSSNQDSSRVGGGIFNAPTLMVAKPEEVL 233

Query: 2126 AYTVKP-SPYVEQDSSQTAIRGAGRQKADKSRKHELQSQDSLITDKPTDKMSEVSVSEVP 1950
            A  VK  S   +++  +T+ +G+   K    + +  QS+ S ++ + +    + S S   
Sbjct: 234  ASPVKSFSCDKKENVCETSSKGSPECKYSSPKSNNTQSKKSPVSCELSSGNLDPSSSMAC 293

Query: 1949 TDTSEPC--LVKSEGLKRKGDLEFQMQLEMALSATAVVNSHVSMASDAXXXXXXXXXXXX 1776
            +D SE C    KS+ LKRKGDLEF+MQLEMALSAT V  S  ++ SD             
Sbjct: 294  SDISEACHPKEKSQALKRKGDLEFEMQLEMALSATNVATSKSNICSDVKDLNSNSSTVLP 353

Query: 1775 SKRMKKIRKEESQTCSNGISTAIGSKKVGAPLYWAEVFCGGENLTGKWVHVDAVNAIIDG 1596
             KR+KKI   ES T   GISTA+GS+KVGAPLYWAEV+C GENLTGKWVHVDA NAIIDG
Sbjct: 354  VKRLKKIESGESSTSCLGISTAVGSRKVGAPLYWAEVYCSGENLTGKWVHVDAANAIIDG 413

Query: 1595 EHKVEAAAAACKKSLRYVVAFAGHGAKDVTRRYCTKWYKVAAQRINSTWWDAVLEPLKEL 1416
            E KVEAAAAACK SLRY+VAFAG GAKDVTRRYC KWY++A++R+NS WWDAVL PL+EL
Sbjct: 414  EQKVEAAAAACKTSLRYIVAFAGCGAKDVTRRYCMKWYRIASKRVNSAWWDAVLAPLREL 473

Query: 1415 ESGATGGVVSVECEASCQKKVEVSQVEPSMSNSCGASMDSCEKKATESFMRNSFASTRGS 1236
            ESGATG +                                      ES  ++SF + R S
Sbjct: 474  ESGATGDL------------------------------------NVESSAKDSFVADRNS 497

Query: 1235 LEDMELETRALIEPLPTNQQAYRNHHLYVIERWLKKYEILYPKGPVLGFCSGHSVYPRTC 1056
            LEDMELETRAL EPLPTNQQAY+NH LYVIERWL KY+ILYPKGP+LGFCSGH+VYPR+C
Sbjct: 498  LEDMELETRALTEPLPTNQQAYKNHQLYVIERWLNKYQILYPKGPILGFCSGHAVYPRSC 557

Query: 1055 VQTLHTKERWLREGLQVKAGEVPVKVLKRSMKCSKEEAGDDNDYAEVDHQGITSLYGKWQ 876
            VQTL TKERWLRE LQVKA EVPVKV+K S K  K +  +  DY EVD +G   LYGKWQ
Sbjct: 558  VQTLKTKERWLREALQVKANEVPVKVIKNSSKSKKGQDFEPEDYDEVDARGNIELYGKWQ 617

Query: 875  TEPLCLPRAVNGIVPKNERGQVDVWSEKCLPPGTIHLRLPRVATVARRLDIDFAPAMVGF 696
             EPL LP AVNGIVP+NERGQVDVWSEKCLPPGT+HLRLPRV +VA+RL+ID APAMVGF
Sbjct: 618  LEPLRLPSAVNGIVPRNERGQVDVWSEKCLPPGTVHLRLPRVYSVAKRLEIDSAPAMVGF 677

Query: 695  DFRNGRSVPLFEGIVVCTEFKDAILXXXXXXXXXXXXXXXXXXXAQALSRWYQLLSSIIT 516
            +FRNGRS P+F+GIVVC EFKD IL                   AQA SRWYQLLSSI+T
Sbjct: 678  EFRNGRSTPVFDGIVVCAEFKDTILEAYAEEEEKREAEEKKRREAQATSRWYQLLSSIVT 737

Query: 515  RKRLNECYGDGALPQSSIEIPKSGDKCYNSSATATATQKTEASPECQQVNIPEKLNAPSS 336
            R+RLN CYG+ +  QSS        K  NS+    ++Q    SP  Q      KL+APS 
Sbjct: 738  RQRLNNCYGNNSTSQSSSNF--QNVKKTNSNVGVDSSQNDWQSPN-QVDRGDTKLHAPSP 794

Query: 335  MPTENHEHEFILDEKKVDEGGLTRIKRCHCGFSIQFEEL 219
              +E HEH ++++++  DE      KRCHCGF+IQ EEL
Sbjct: 795  FQSEEHEHVYLIEDQSFDEENSVTTKRCHCGFTIQVEEL 833


>gb|KDO50782.1| hypothetical protein CISIN_1g002340mg [Citrus sinensis]
          Length = 934

 Score =  801 bits (2068), Expect = 0.0
 Identities = 432/759 (56%), Positives = 515/759 (67%), Gaps = 3/759 (0%)
 Frame = -1

Query: 2486 THLHKIAEAPNLTASHLSPLVSWFHNNFHVRSPSVAEKSCHFALASTLETREGSPEAVAA 2307
            ++L KI+E   LTA+ LSP+VSWFH+NFHVRS     +S H  LA  LE+REG+PE +AA
Sbjct: 215  SYLLKISEVSKLTANALSPIVSWFHDNFHVRSSVSTRRSFHSDLAHALESREGTPEEIAA 274

Query: 2306 LSVALFRALNLTTRFVSILDVISLKPDADKSESSVADGCKNERDIFSSSTLMVAGPSCSS 2127
            LSVALFRAL LTTRFVSILDV SLKP+ADK+ SS  D  +    IF++ TLMVA P    
Sbjct: 275  LSVALFRALKLTTRFVSILDVASLKPEADKNVSSNQDSSRVGGGIFNAPTLMVAKPEEVL 334

Query: 2126 AYTVKP-SPYVEQDSSQTAIRGAGRQKADKSRKHELQSQDSLITDKPTDKMSEVSVSEVP 1950
            A  VK  S   +++  +T+ +G+   K    + +  QS+ S ++ + +    + S S   
Sbjct: 335  ASPVKSFSCDKKENVCETSSKGSPECKYSSPKSNNTQSKKSPVSCELSSGNLDPSSSMAC 394

Query: 1949 TDTSEPC--LVKSEGLKRKGDLEFQMQLEMALSATAVVNSHVSMASDAXXXXXXXXXXXX 1776
            +D SE C    KS+ LKRKGDLEF+MQLEMALSAT V  S  ++ SD             
Sbjct: 395  SDISEACHPKEKSQALKRKGDLEFEMQLEMALSATNVATSKSNICSDVKDLNSNSSTVLP 454

Query: 1775 SKRMKKIRKEESQTCSNGISTAIGSKKVGAPLYWAEVFCGGENLTGKWVHVDAVNAIIDG 1596
             KR+KKI   ES T   GISTA+GS+KVGAPLYWAEV+C GENLTGKWVHVDA NAIIDG
Sbjct: 455  VKRLKKIESGESSTSCLGISTAVGSRKVGAPLYWAEVYCSGENLTGKWVHVDAANAIIDG 514

Query: 1595 EHKVEAAAAACKKSLRYVVAFAGHGAKDVTRRYCTKWYKVAAQRINSTWWDAVLEPLKEL 1416
            E KVEAAAAACK SLRY+VAFAG GAKDVTRRYC KWY++A++R+NS WWDAVL PL+EL
Sbjct: 515  EQKVEAAAAACKTSLRYIVAFAGCGAKDVTRRYCMKWYRIASKRVNSAWWDAVLAPLREL 574

Query: 1415 ESGATGGVVSVECEASCQKKVEVSQVEPSMSNSCGASMDSCEKKATESFMRNSFASTRGS 1236
            ESGATG +                                      ES  ++SF + R S
Sbjct: 575  ESGATGDL------------------------------------NVESSAKDSFVADRNS 598

Query: 1235 LEDMELETRALIEPLPTNQQAYRNHHLYVIERWLKKYEILYPKGPVLGFCSGHSVYPRTC 1056
            LEDMELETRAL EPLPTNQQAY+NH LYVIERWL KY+ILYPKGP+LGFCSGH+VYPR+C
Sbjct: 599  LEDMELETRALTEPLPTNQQAYKNHQLYVIERWLNKYQILYPKGPILGFCSGHAVYPRSC 658

Query: 1055 VQTLHTKERWLREGLQVKAGEVPVKVLKRSMKCSKEEAGDDNDYAEVDHQGITSLYGKWQ 876
            VQTL TKERWLRE LQVKA EVPVKV+K S K  K +  +  DY EVD +G   LYGKWQ
Sbjct: 659  VQTLKTKERWLREALQVKANEVPVKVIKNSSKSKKGQDFEPEDYDEVDARGNIELYGKWQ 718

Query: 875  TEPLCLPRAVNGIVPKNERGQVDVWSEKCLPPGTIHLRLPRVATVARRLDIDFAPAMVGF 696
             EPL LP AVNGIVP+NERGQVDVWSEKCLPPGT+HLRLPRV +VA+RL+ID APAMVGF
Sbjct: 719  LEPLRLPSAVNGIVPRNERGQVDVWSEKCLPPGTVHLRLPRVYSVAKRLEIDSAPAMVGF 778

Query: 695  DFRNGRSVPLFEGIVVCTEFKDAILXXXXXXXXXXXXXXXXXXXAQALSRWYQLLSSIIT 516
            +FRNGRS P+F+GIVVC EFKD IL                   AQA SRWYQLLSSI+T
Sbjct: 779  EFRNGRSTPVFDGIVVCAEFKDTILEAYAEEEEKREAEEKKRREAQATSRWYQLLSSIVT 838

Query: 515  RKRLNECYGDGALPQSSIEIPKSGDKCYNSSATATATQKTEASPECQQVNIPEKLNAPSS 336
            R+RLN CYG+ +  QSS        K  NS+    ++Q    SP  Q      KL+APS 
Sbjct: 839  RQRLNNCYGNNSTSQSSSNF--QNVKKTNSNVGVDSSQNDWQSPN-QVDRGDTKLHAPSP 895

Query: 335  MPTENHEHEFILDEKKVDEGGLTRIKRCHCGFSIQFEEL 219
              +E HEH ++++++  DE      KRCHCGF+IQ EEL
Sbjct: 896  FQSEEHEHVYLIEDQSFDEENSVTTKRCHCGFTIQVEEL 934


>ref|XP_010660313.1| PREDICTED: DNA repair protein complementing XP-C cells homolog [Vitis
            vinifera]
          Length = 953

 Score =  800 bits (2067), Expect = 0.0
 Identities = 438/758 (57%), Positives = 524/758 (69%), Gaps = 4/758 (0%)
 Frame = -1

Query: 2480 LHKIAEAPNLTASHLSPLVSWFHNNFHVRSPSVAEKSCHFALASTLETREGSPEAVAALS 2301
            L KI+E P LTA+  + LV WFH+NF VRSPS  E+  H +LA  LE  EG+PE VAALS
Sbjct: 217  LLKISEIPRLTANAFTLLVRWFHDNFRVRSPSSVERPLHSSLAFALEAHEGTPEEVAALS 276

Query: 2300 VALFRALNLTTRFVSILDVISLKPDADKSESSVADGCKNERDIFSSSTLMVAGPSCSSAY 2121
            VALFRALNLTTRFVSILDV  LKP ADKSES++ +  +    IF +STLMVA  +  S+ 
Sbjct: 277  VALFRALNLTTRFVSILDVAPLKPGADKSESAIQNANRASGGIFDNSTLMVARKNQVSSS 336

Query: 2120 TVKPSP-YVEQDSSQTAIRGAGRQKADKSRKHELQSQDSLITDKPTDKMSEVSVSEVPTD 1944
             VK S  +V+ +  + +   A   K  KS +   QS DS I+D+  D+M +    +    
Sbjct: 337  PVKSSSCHVKGNVCEPSQNNACTNKDLKSTRKTAQSTDSPISDQLNDRMLDSLACKEQFA 396

Query: 1943 TSEPCLV-KSEGLKRKGDLEFQMQLEMALSATAV-VNSHVSMASDAXXXXXXXXXXXXSK 1770
             SE C+  K EG KRKGDLEF+MQLEMALSATAV +N     ++               K
Sbjct: 397  ISEDCITDKPEGSKRKGDLEFKMQLEMALSATAVGINESNGGSNVKELFSESSSFSSPLK 456

Query: 1769 RMKKIRKEESQTCSNGISTAIGSKKVGAPLYWAEVFCGGENLTGKWVHVDAVNAIIDGEH 1590
            R+K+I+ EE  T S GISTA+GS+K+GAPLYWAEVFC GENLTGKWVH+DA+NAIIDGE 
Sbjct: 457  RVKRIKIEEYPTPSQGISTAVGSRKIGAPLYWAEVFCTGENLTGKWVHIDAINAIIDGEE 516

Query: 1589 KVEAAAAACKKSLRYVVAFAGHGAKDVTRRYCTKWYKVAAQRINSTWWDAVLEPLKELES 1410
            KVEAAAAACK SLRYVVAF+G+GAKDVTRRYC KWY++A+QRINS WWDAVL PLKELE+
Sbjct: 517  KVEAAAAACKTSLRYVVAFSGNGAKDVTRRYCMKWYRIASQRINSAWWDAVLAPLKELEA 576

Query: 1409 GATGGVVSVECEASCQKKVEVSQVEPSMSNSCGASMDSCEKKATESFMRNSFASTRGSLE 1230
            GA G  V+      C  K+ V  ++           ++ +K   ES  RN+F +TR SLE
Sbjct: 577  GAVGDHVT------CPGKLGVEVLK-----------ENVKKVRAESSDRNAFVATRDSLE 619

Query: 1229 DMELETRALIEPLPTNQQAYRNHHLYVIERWLKKYEILYPKGPVLGFCSGHSVYPRTCVQ 1050
            DMELETRAL EPLPTNQQAY+NH LY +ERWL KY+IL+PKGPVLGFCSGH VYPRTCVQ
Sbjct: 620  DMELETRALTEPLPTNQQAYKNHQLYAMERWLTKYQILHPKGPVLGFCSGHPVYPRTCVQ 679

Query: 1049 TLHTKERWLREGLQVKAGEVPVKVLKRSMKCSKEEAGDDNDYAEVDHQGITSLYGKWQTE 870
            TL TK+RWLREGLQVKA E P KVLK S K SK +A +  DY + D  G  +LYG+WQ E
Sbjct: 680  TLKTKQRWLREGLQVKADEHPTKVLKCSSKLSKVQALEAVDYGDADPGGTIALYGRWQME 739

Query: 869  PLCLPRAVNGIVPKNERGQVDVWSEKCLPPGTIHLRLPRVATVARRLDIDFAPAMVGFDF 690
            PLCLP AVNGIVPKNE GQVDVWSEKCLPPGT+HLR+PRV  +A++L+IDFAPAMVGF+F
Sbjct: 740  PLCLPCAVNGIVPKNEWGQVDVWSEKCLPPGTVHLRVPRVVPIAKKLEIDFAPAMVGFEF 799

Query: 689  RNGRSVPLFEGIVVCTEFKDAILXXXXXXXXXXXXXXXXXXXAQALSRWYQLLSSIITRK 510
            RNGRS+P+F+GIVVC EFKD IL                   A A+SRWYQLLSSI+ R+
Sbjct: 800  RNGRSIPVFDGIVVCAEFKDTILEVYADEEERRQAEEKRGIEAHAVSRWYQLLSSIVIRQ 859

Query: 509  RLNECYGDGALPQSSIEIPKSGDKCYNSSATATATQKTEASPECQQVNIPE-KLNAPSSM 333
            RLN  YG+G L  +S  I K  ++   SS             ECQQ  + +  L+ PS +
Sbjct: 860  RLNNSYGNGLLSDTSNGIKKVNNR---SSWQVEGRDNDRQFLECQQGYVEDTNLDPPSMV 916

Query: 332  PTENHEHEFILDEKKVDEGGLTRIKRCHCGFSIQFEEL 219
              E+HEH FI +E   DE  L R KRC CGFSIQ EEL
Sbjct: 917  FREDHEHVFIAEE-GFDEENLVRTKRCGCGFSIQVEEL 953


>ref|XP_012077823.1| PREDICTED: DNA repair protein complementing XP-C cells homolog
            [Jatropha curcas]
          Length = 909

 Score =  793 bits (2049), Expect = 0.0
 Identities = 423/758 (55%), Positives = 528/758 (69%), Gaps = 3/758 (0%)
 Frame = -1

Query: 2483 HLHKIAEAPNLTASHLSPLVSWFHNNFHVRSPSVAEKSCHFALASTLETREGSPEAVAAL 2304
            HL KI E   L+A+ LSP+VSWFHNNF +RS +  ++S   ALA  LETREG+PE +AAL
Sbjct: 185  HLLKIPEVSKLSANSLSPVVSWFHNNFRIRSSTSEKRSFQSALAFALETREGTPEEIAAL 244

Query: 2303 SVALFRALNLTTRFVSILDVISLKPDADKSESSVADGCKNERDIFSSSTLMVAGPSCSSA 2124
            SVALFRAL LTTRFVSILDV S+KP+AD+ ESS  D  + +R IF+SSTLMV        
Sbjct: 245  SVALFRALKLTTRFVSILDVASIKPEADRCESSSQDTSRVKRGIFNSSTLMVDRSEQVLE 304

Query: 2123 YTVKPSPYVEQDS-SQTAIRGAGRQKADKSRKHELQSQDSLITDKPTDKMSEVSVSEVPT 1947
              VK     E ++  +T+++ + ++K    R ++  S D     +  +++++    E   
Sbjct: 305  SPVKSFSCNENNTIHETSLKASFKRKDSHPRSNKTHSNDCPTAVRLENQVTDSFSCEAQD 364

Query: 1946 DTSEPCL-VKSEGLKRKGDLEFQMQLEMALSATAVVNSHVSMASD-AXXXXXXXXXXXXS 1773
              SE C+  KS+G KRKGDLEF+MQL+MALSATA  N  +SM SD +             
Sbjct: 365  KISESCISTKSQGSKRKGDLEFEMQLQMALSATATANPQISMTSDVSSLISDSSNISSPV 424

Query: 1772 KRMKKIRKEESQTCSNGISTAIGSKKVGAPLYWAEVFCGGENLTGKWVHVDAVNAIIDGE 1593
            KR+K +  E+S   S+GISTA+GS+KVG+PLYWAE++C  ENLTGKWVHVDAVNAI+DGE
Sbjct: 425  KRIKTVASEQSS--SHGISTAVGSRKVGSPLYWAEIYCSRENLTGKWVHVDAVNAIVDGE 482

Query: 1592 HKVEAAAAACKKSLRYVVAFAGHGAKDVTRRYCTKWYKVAAQRINSTWWDAVLEPLKELE 1413
             KVEAAAAACK SLRYVVAFAGHGAKDVTRRYC KWYK+A QRINS WWD+VL PL++LE
Sbjct: 483  QKVEAAAAACKTSLRYVVAFAGHGAKDVTRRYCMKWYKIALQRINSVWWDSVLTPLRDLE 542

Query: 1412 SGATGGVVSVECEASCQKKVEVSQVEPSMSNSCGASMDSCEKKATESFMRNSFASTRGSL 1233
            SGATGG  S+E     ++K++    +PS                     RNSF ++R SL
Sbjct: 543  SGATGG--SLEVSEVPERKIDA---QPSG--------------------RNSFVASRNSL 577

Query: 1232 EDMELETRALIEPLPTNQQAYRNHHLYVIERWLKKYEILYPKGPVLGFCSGHSVYPRTCV 1053
            ED+ELETRAL EPLPTNQQAY+NH LY IERWL K +IL+P+GPVLGFCSGH VYPR CV
Sbjct: 578  EDVELETRALTEPLPTNQQAYKNHQLYAIERWLTKSQILHPRGPVLGFCSGHPVYPRACV 637

Query: 1052 QTLHTKERWLREGLQVKAGEVPVKVLKRSMKCSKEEAGDDNDYAEVDHQGITSLYGKWQT 873
            QTL TKERWLR+GLQVKA E+P KVLK+S K  K ++ +D++Y E D +G T LYGKWQ 
Sbjct: 638  QTLKTKERWLRDGLQVKAQELPAKVLKQSGKLKKVKSSEDDEYGEADPKGTTELYGKWQL 697

Query: 872  EPLCLPRAVNGIVPKNERGQVDVWSEKCLPPGTIHLRLPRVATVARRLDIDFAPAMVGFD 693
            EPL LPRAVNGIVPKNERGQVDVWSEKCLPPGT+HLRLPR+  VA+RL+ID+APAMVGF+
Sbjct: 698  EPLQLPRAVNGIVPKNERGQVDVWSEKCLPPGTVHLRLPRIFHVAKRLEIDYAPAMVGFE 757

Query: 692  FRNGRSVPLFEGIVVCTEFKDAILXXXXXXXXXXXXXXXXXXXAQALSRWYQLLSSIITR 513
            F+NGRS+P+FEGIVVCTEFKDAIL                   A+AL+RWYQLLSSIITR
Sbjct: 758  FKNGRSIPVFEGIVVCTEFKDAILQAYAEEEERREAAEKKRIEAEALTRWYQLLSSIITR 817

Query: 512  KRLNECYGDGALPQSSIEIPKSGDKCYNSSATATATQKTEASPECQQVNIPEKLNAPSSM 333
            +RLN CY + +  Q    I +  +  Y +S T   +Q+       + +++  +L     +
Sbjct: 818  QRLNNCYMNNSSSQMPSNI-QDTNNAYVNSKTDKQSQELRGEDMRKPISLASQL-----V 871

Query: 332  PTENHEHEFILDEKKVDEGGLTRIKRCHCGFSIQFEEL 219
             T++HEH F+  ++  DE    R KRC CGFS+Q EEL
Sbjct: 872  LTKDHEHVFLAVDQSFDEETSVRTKRCSCGFSVQVEEL 909


>ref|XP_002305874.2| hypothetical protein POPTR_0004s08580g [Populus trichocarpa]
            gi|550340612|gb|EEE86385.2| hypothetical protein
            POPTR_0004s08580g [Populus trichocarpa]
          Length = 898

 Score =  776 bits (2005), Expect = 0.0
 Identities = 424/756 (56%), Positives = 506/756 (66%), Gaps = 1/756 (0%)
 Frame = -1

Query: 2483 HLHKIAEAPNLTASHLSPLVSWFHNNFHVRSPSVAEKSCHFALASTLETREGSPEAVAAL 2304
            HL      P L A  LSPL  WFHNNFHV S    ++S H AL+  LETREG+ E +AAL
Sbjct: 195  HLSNTLGDPKLHAKALSPLAHWFHNNFHVASSVSEKRSFHSALSCALETREGTLEELAAL 254

Query: 2303 SVALFRALNLTTRFVSILDVISLKPDADKSESSVADGCKNERDIFSSSTLMVAGPSCSSA 2124
            SVALFRAL LTTRFVSILDV S+KPDADK ES      K  R IF++STLMV  P     
Sbjct: 255  SVALFRALKLTTRFVSILDVASIKPDADKYESLSQGTSKMHRGIFNTSTLMVDRPK---E 311

Query: 2123 YTVKPSPYVEQDSSQTAIRGAGRQKADKSRKHELQSQDSLITDKPTDKMSEVSVSEVPTD 1944
              + P                 +  +   +K+++QS DS    +  DKM +    E   +
Sbjct: 312  VFIPP-----------------KSLSCNEKKNKIQSNDSPPAVELKDKMVDTFPCEAQNN 354

Query: 1943 TSEPCLVK-SEGLKRKGDLEFQMQLEMALSATAVVNSHVSMASDAXXXXXXXXXXXXSKR 1767
            TSE C+ K S+G KRKGDLEF+MQL+MA+SATAV     +   D              KR
Sbjct: 355  TSEECVTKKSQGSKRKGDLEFEMQLQMAMSATAVATQS-NKELDVKESSNSSDVSSPFKR 413

Query: 1766 MKKIRKEESQTCSNGISTAIGSKKVGAPLYWAEVFCGGENLTGKWVHVDAVNAIIDGEHK 1587
            ++KI  EES   S GISTA+GS+K+G+PLYWAEV+C GENLTGKWVHVDAV+ I+DGE K
Sbjct: 414  IRKIANEESS--SQGISTALGSRKIGSPLYWAEVYCSGENLTGKWVHVDAVHDIVDGEQK 471

Query: 1586 VEAAAAACKKSLRYVVAFAGHGAKDVTRRYCTKWYKVAAQRINSTWWDAVLEPLKELESG 1407
            VEAAA ACK SLRYVVAFAG GAKDVTRRYC KWYK+A+QR+NS WWDAVL PL+ELESG
Sbjct: 472  VEAAADACKTSLRYVVAFAGLGAKDVTRRYCMKWYKIASQRVNSLWWDAVLAPLRELESG 531

Query: 1406 ATGGVVSVECEASCQKKVEVSQVEPSMSNSCGASMDSCEKKATESFMRNSFASTRGSLED 1227
            ATGG+  +E            +     SN         E +   +   NSFA+TR ++ED
Sbjct: 532  ATGGMAHLE------------KPHADASN---------EHENVIASGLNSFAATRNTIED 570

Query: 1226 MELETRALIEPLPTNQQAYRNHHLYVIERWLKKYEILYPKGPVLGFCSGHSVYPRTCVQT 1047
            MEL+TRAL EPLPTNQQAY+NH LY IE+WL K +IL+PKGP+LGFCSGH VYPR CVQT
Sbjct: 571  MELQTRALTEPLPTNQQAYKNHLLYAIEKWLTKCQILHPKGPILGFCSGHPVYPRACVQT 630

Query: 1046 LHTKERWLREGLQVKAGEVPVKVLKRSMKCSKEEAGDDNDYAEVDHQGITSLYGKWQTEP 867
            L TKERWLREGLQVK  E+P KV+K+S K  K +  +D+DY E D  G+  LYG WQ EP
Sbjct: 631  LRTKERWLREGLQVKVKELPAKVVKQSGKLKKVQFSEDDDYGETD-SGVVELYGMWQLEP 689

Query: 866  LCLPRAVNGIVPKNERGQVDVWSEKCLPPGTIHLRLPRVATVARRLDIDFAPAMVGFDFR 687
            L LP AVNGIVPKNERGQVDVWSEKCLPPGT+HLRLPRV  VA+RL+ID+APAMVGF+FR
Sbjct: 690  LQLPHAVNGIVPKNERGQVDVWSEKCLPPGTVHLRLPRVFYVAKRLEIDYAPAMVGFEFR 749

Query: 686  NGRSVPLFEGIVVCTEFKDAILXXXXXXXXXXXXXXXXXXXAQALSRWYQLLSSIITRKR 507
            NGRSVP+F+GIVVC EFKDAIL                   AQA+SRWYQLLSSIITR+R
Sbjct: 750  NGRSVPVFDGIVVCNEFKDAILEAYAEEEERRDAEEKKRNEAQAISRWYQLLSSIITRQR 809

Query: 506  LNECYGDGALPQSSIEIPKSGDKCYNSSATATATQKTEASPECQQVNIPEKLNAPSSMPT 327
            LN  YG+G LPQ    +  + ++         +TQ     P  Q+     KLNAPS   T
Sbjct: 810  LNNSYGNGLLPQMPSNVQNTNNQ---PDVHVGSTQ----PPGHQKDAKDRKLNAPSMTLT 862

Query: 326  ENHEHEFILDEKKVDEGGLTRIKRCHCGFSIQFEEL 219
            ++HEH F+++++  DE   TR KRCHCGFS+Q EEL
Sbjct: 863  DDHEHVFLVEDQSFDEETSTRTKRCHCGFSVQVEEL 898


>ref|XP_012471970.1| PREDICTED: DNA repair protein complementing XP-C cells homolog
            isoform X2 [Gossypium raimondii]
          Length = 953

 Score =  771 bits (1990), Expect = 0.0
 Identities = 420/760 (55%), Positives = 516/760 (67%), Gaps = 4/760 (0%)
 Frame = -1

Query: 2486 THLHKIAEAPNLTASHLSPLVSWFHNNFHVRSPSVAEKSCHFALASTLETREGSPEAVAA 2307
            THL KI+E  N+TA+ L+PLV+WFH+NFHVR+ + AE+S   ALA+ LET EG+PE +AA
Sbjct: 208  THLLKISEVSNITANALTPLVTWFHDNFHVRNLARAERSFRTALATALETHEGTPEEIAA 267

Query: 2306 LSVALFRALNLTTRFVSILDVISLKPDADKSESSVADGCKNERDIFSSSTLMVAGPSCSS 2127
            LSVALFRAL  T RFVSILDV SLKP AD  E S     +    IFS+STLMV     +S
Sbjct: 268  LSVALFRALKFTARFVSILDVTSLKPKADTYEPSNQVAERVSGGIFSTSTLMVDNLKRAS 327

Query: 2126 AYT--VKPSPYVEQDSSQTAIRGAGRQKADKSRKHELQSQDSLITDKPTDKMSEVSVSEV 1953
                 V+ SP  E+D    + R   + K   S  ++ QS+DS    + TD  S     +V
Sbjct: 328  IAPSPVQTSPCNEKDDHGISSR---KSKGGCSTSNDAQSRDSTSVKESTDGKS---TCQV 381

Query: 1952 PTDTSEPCLVK-SEGLKRKGDLEFQMQLEMALSATAVVNSHVSMASDAXXXXXXXXXXXX 1776
              DTS  C+ K S+GLKRKGDLEF+MQL MA+SAT+V  +H ++  D+            
Sbjct: 382  QPDTSRQCVPKNSQGLKRKGDLEFEMQLAMAISATSV-ETHENI-HDSSDGNNSLEASIP 439

Query: 1775 SKRMKKIRKEESQTCSNGISTAIGSKKVGAPLYWAEVFCGGENLTGKWVHVDAVNAIIDG 1596
             KR K+I + ES +C  G STA+GS+KVG+PL+WAEV+C GENLTGKWVHVDAVNAIIDG
Sbjct: 440  MKRWKRIERVESASCFQGFSTALGSRKVGSPLFWAEVYCDGENLTGKWVHVDAVNAIIDG 499

Query: 1595 EHKVEAAAAACKKSLRYVVAFAGHGAKDVTRRYCTKWYKVAAQRINSTWWDAVLEPLKEL 1416
            E KVE AAAACK SLRYVVAFAGHGAKDVTRRYC KWYK+A +R+NSTWWD++L PL++L
Sbjct: 500  EQKVEDAAAACKTSLRYVVAFAGHGAKDVTRRYCMKWYKIAPKRVNSTWWDSILAPLRQL 559

Query: 1415 ESGATGGVVSVECEASCQKKVEVSQVEPSMSNSCGASMDSCEKKATESFMRNSFASTRGS 1236
            ESG TGG + V         ++   + P  S    AS +   K   ES +++SF +TR S
Sbjct: 560  ESGGTGGTIKVSEHPGENSSLD-HVILPEKSGQ-EASKEYGSKIEVESSVKDSFVATRNS 617

Query: 1235 LEDMELETRALIEPLPTNQQAYRNHHLYVIERWLKKYEILYPKGPVLGFCSGHSVYPRTC 1056
            LEDMELETRAL EPLPTNQQAY+NH LY +ERWL KY+IL+PKGP+LGFCSG+ VYPR+C
Sbjct: 618  LEDMELETRALTEPLPTNQQAYKNHALYALERWLTKYQILHPKGPILGFCSGYPVYPRSC 677

Query: 1055 VQTLHTKERWLREGLQVKAGEVPVKVLKRSMKCSKEEAGDDNDYAEVDHQGITSLYGKWQ 876
            VQTL T+ERWLREGLQ+K  E PVKVL++S K  K     D    E+D +    LYGKWQ
Sbjct: 678  VQTLKTRERWLREGLQIKGTETPVKVLEQSTKLKKARVSKD-VCDEIDSKETIELYGKWQ 736

Query: 875  TEPLCLPRAVNGIVPKNERGQVDVWSEKCLPPGTIHLRLPRVATVARRLDIDFAPAMVGF 696
             EPL LPRAVNGIVPKNERGQVDVWSEKCLPPGT+H+RLPRV  VA+RL+ID+APAMVGF
Sbjct: 737  LEPLLLPRAVNGIVPKNERGQVDVWSEKCLPPGTVHIRLPRVFVVAKRLEIDYAPAMVGF 796

Query: 695  DFRNGRSVPLFEGIVVCTEFKDAILXXXXXXXXXXXXXXXXXXXAQALSRWYQLLSSIIT 516
            +FRNGR+VP+++GIVVCTEFKDAIL                   AQA+SRWYQLLSS+IT
Sbjct: 797  EFRNGRAVPVYDGIVVCTEFKDAILEAYAEEEERRAAEEKKRTEAQAISRWYQLLSSVIT 856

Query: 515  RKRLNECYGDGALPQSSIEIPKSGDKCYNSSATATATQKTEASPECQQVNIPEKLNAPSS 336
            R++LN  Y D +  Q S  I    DK   +     ++   +     ++ N  +  +  S 
Sbjct: 857  RQKLNSYYRDSSSSQPSRNIQ---DKNIETKTPVQSSNDNKQPTAHRKANNQDTTHTTSL 913

Query: 335  MPTE-NHEHEFILDEKKVDEGGLTRIKRCHCGFSIQFEEL 219
            +  E  HEH F+   +  D     R KRC CGFSIQ EEL
Sbjct: 914  VALEVGHEHVFLTKNESFDAENSIRTKRCECGFSIQVEEL 953


>ref|XP_012471962.1| PREDICTED: DNA repair protein complementing XP-C cells homolog
            isoform X1 [Gossypium raimondii]
            gi|763741049|gb|KJB08548.1| hypothetical protein
            B456_001G088500 [Gossypium raimondii]
          Length = 983

 Score =  771 bits (1990), Expect = 0.0
 Identities = 420/760 (55%), Positives = 516/760 (67%), Gaps = 4/760 (0%)
 Frame = -1

Query: 2486 THLHKIAEAPNLTASHLSPLVSWFHNNFHVRSPSVAEKSCHFALASTLETREGSPEAVAA 2307
            THL KI+E  N+TA+ L+PLV+WFH+NFHVR+ + AE+S   ALA+ LET EG+PE +AA
Sbjct: 238  THLLKISEVSNITANALTPLVTWFHDNFHVRNLARAERSFRTALATALETHEGTPEEIAA 297

Query: 2306 LSVALFRALNLTTRFVSILDVISLKPDADKSESSVADGCKNERDIFSSSTLMVAGPSCSS 2127
            LSVALFRAL  T RFVSILDV SLKP AD  E S     +    IFS+STLMV     +S
Sbjct: 298  LSVALFRALKFTARFVSILDVTSLKPKADTYEPSNQVAERVSGGIFSTSTLMVDNLKRAS 357

Query: 2126 AYT--VKPSPYVEQDSSQTAIRGAGRQKADKSRKHELQSQDSLITDKPTDKMSEVSVSEV 1953
                 V+ SP  E+D    + R   + K   S  ++ QS+DS    + TD  S     +V
Sbjct: 358  IAPSPVQTSPCNEKDDHGISSR---KSKGGCSTSNDAQSRDSTSVKESTDGKS---TCQV 411

Query: 1952 PTDTSEPCLVK-SEGLKRKGDLEFQMQLEMALSATAVVNSHVSMASDAXXXXXXXXXXXX 1776
              DTS  C+ K S+GLKRKGDLEF+MQL MA+SAT+V  +H ++  D+            
Sbjct: 412  QPDTSRQCVPKNSQGLKRKGDLEFEMQLAMAISATSV-ETHENI-HDSSDGNNSLEASIP 469

Query: 1775 SKRMKKIRKEESQTCSNGISTAIGSKKVGAPLYWAEVFCGGENLTGKWVHVDAVNAIIDG 1596
             KR K+I + ES +C  G STA+GS+KVG+PL+WAEV+C GENLTGKWVHVDAVNAIIDG
Sbjct: 470  MKRWKRIERVESASCFQGFSTALGSRKVGSPLFWAEVYCDGENLTGKWVHVDAVNAIIDG 529

Query: 1595 EHKVEAAAAACKKSLRYVVAFAGHGAKDVTRRYCTKWYKVAAQRINSTWWDAVLEPLKEL 1416
            E KVE AAAACK SLRYVVAFAGHGAKDVTRRYC KWYK+A +R+NSTWWD++L PL++L
Sbjct: 530  EQKVEDAAAACKTSLRYVVAFAGHGAKDVTRRYCMKWYKIAPKRVNSTWWDSILAPLRQL 589

Query: 1415 ESGATGGVVSVECEASCQKKVEVSQVEPSMSNSCGASMDSCEKKATESFMRNSFASTRGS 1236
            ESG TGG + V         ++   + P  S    AS +   K   ES +++SF +TR S
Sbjct: 590  ESGGTGGTIKVSEHPGENSSLD-HVILPEKSGQ-EASKEYGSKIEVESSVKDSFVATRNS 647

Query: 1235 LEDMELETRALIEPLPTNQQAYRNHHLYVIERWLKKYEILYPKGPVLGFCSGHSVYPRTC 1056
            LEDMELETRAL EPLPTNQQAY+NH LY +ERWL KY+IL+PKGP+LGFCSG+ VYPR+C
Sbjct: 648  LEDMELETRALTEPLPTNQQAYKNHALYALERWLTKYQILHPKGPILGFCSGYPVYPRSC 707

Query: 1055 VQTLHTKERWLREGLQVKAGEVPVKVLKRSMKCSKEEAGDDNDYAEVDHQGITSLYGKWQ 876
            VQTL T+ERWLREGLQ+K  E PVKVL++S K  K     D    E+D +    LYGKWQ
Sbjct: 708  VQTLKTRERWLREGLQIKGTETPVKVLEQSTKLKKARVSKD-VCDEIDSKETIELYGKWQ 766

Query: 875  TEPLCLPRAVNGIVPKNERGQVDVWSEKCLPPGTIHLRLPRVATVARRLDIDFAPAMVGF 696
             EPL LPRAVNGIVPKNERGQVDVWSEKCLPPGT+H+RLPRV  VA+RL+ID+APAMVGF
Sbjct: 767  LEPLLLPRAVNGIVPKNERGQVDVWSEKCLPPGTVHIRLPRVFVVAKRLEIDYAPAMVGF 826

Query: 695  DFRNGRSVPLFEGIVVCTEFKDAILXXXXXXXXXXXXXXXXXXXAQALSRWYQLLSSIIT 516
            +FRNGR+VP+++GIVVCTEFKDAIL                   AQA+SRWYQLLSS+IT
Sbjct: 827  EFRNGRAVPVYDGIVVCTEFKDAILEAYAEEEERRAAEEKKRTEAQAISRWYQLLSSVIT 886

Query: 515  RKRLNECYGDGALPQSSIEIPKSGDKCYNSSATATATQKTEASPECQQVNIPEKLNAPSS 336
            R++LN  Y D +  Q S  I    DK   +     ++   +     ++ N  +  +  S 
Sbjct: 887  RQKLNSYYRDSSSSQPSRNIQ---DKNIETKTPVQSSNDNKQPTAHRKANNQDTTHTTSL 943

Query: 335  MPTE-NHEHEFILDEKKVDEGGLTRIKRCHCGFSIQFEEL 219
            +  E  HEH F+   +  D     R KRC CGFSIQ EEL
Sbjct: 944  VALEVGHEHVFLTKNESFDAENSIRTKRCECGFSIQVEEL 983


>gb|KHF97241.1| DNA repair complementing XP-C cells [Gossypium arboreum]
          Length = 976

 Score =  769 bits (1985), Expect = 0.0
 Identities = 419/760 (55%), Positives = 520/760 (68%), Gaps = 4/760 (0%)
 Frame = -1

Query: 2486 THLHKIAEAPNLTASHLSPLVSWFHNNFHVRSPSVAEKSCHFALASTLETREGSPEAVAA 2307
            THL KI+E    TA+ L+PLV+WFH+NFHVR+ + AE+S   ALA+ LET EG+PE +AA
Sbjct: 234  THLLKISE---FTANALTPLVTWFHDNFHVRNLARAERSFRTALATALETHEGTPEEIAA 290

Query: 2306 LSVALFRALNLTTRFVSILDVISLKPDADKSESSVADGCKNERDIFSSSTLMVAGPSCSS 2127
            LSVALFRAL  T RFVSILDV SLKP+ADK E S     +    IFS+STLMV     +S
Sbjct: 291  LSVALFRALKFTARFVSILDVASLKPEADKYEPSNQAAERVSGGIFSTSTLMVDNLKRAS 350

Query: 2126 AYTVKPSPYVEQDSSQTAIRGAGRQKADK--SRKHELQSQDSLITDKPTDKMSEVSVSEV 1953
               + PSP+     S+    G   +K+    S  +  QS+ S   ++ TD  S     +V
Sbjct: 351  ---IAPSPFQTSPCSEKDDYGKSSRKSKDGCSMSNIAQSRGSTSVNESTDGKS---TCQV 404

Query: 1952 PTDTSEPCLVK-SEGLKRKGDLEFQMQLEMALSATAVVNSHVSMASDAXXXXXXXXXXXX 1776
              DTS+ C+ K S+GLKRKGDLEF+MQL MA+SAT+V  +H ++  D+            
Sbjct: 405  QPDTSQQCVPKNSQGLKRKGDLEFEMQLAMAISATSV-ETHENI-HDSSNGNNSLEGSIP 462

Query: 1775 SKRMKKIRKEESQTCSNGISTAIGSKKVGAPLYWAEVFCGGENLTGKWVHVDAVNAIIDG 1596
            +KR K+I + ES +CS G STA+GS+KVG+PL+WAEV+C GENLTGKWVHVDAVNAIIDG
Sbjct: 463  TKRWKRIERVESASCSQGFSTALGSRKVGSPLFWAEVYCDGENLTGKWVHVDAVNAIIDG 522

Query: 1595 EHKVEAAAAACKKSLRYVVAFAGHGAKDVTRRYCTKWYKVAAQRINSTWWDAVLEPLKEL 1416
            E KVE AAAACK SLRYVVAFAGHGAKDVTRRYC KWYK+A +R+NSTWWD+VL PL++L
Sbjct: 523  EQKVEDAAAACKTSLRYVVAFAGHGAKDVTRRYCMKWYKIAPKRVNSTWWDSVLAPLRQL 582

Query: 1415 ESGATGGVVSVECEASCQKKVEVSQVEPSMSNSCGASMDSCEKKATESFMRNSFASTRGS 1236
            ESG TGG + V       +   ++ V     +   AS +   K   ES +++SF +TR S
Sbjct: 583  ESGGTGGTIKVSEHPG--ENSSLNHVILPEKSGQEASKEYGSKIEVESSVKDSFIATRNS 640

Query: 1235 LEDMELETRALIEPLPTNQQAYRNHHLYVIERWLKKYEILYPKGPVLGFCSGHSVYPRTC 1056
            LEDMELETRAL EPLPTNQQAY+NH LY +ERWL KY+IL+PKGP+LGFCSGH VYPR+C
Sbjct: 641  LEDMELETRALTEPLPTNQQAYKNHALYALERWLTKYQILHPKGPILGFCSGHPVYPRSC 700

Query: 1055 VQTLHTKERWLREGLQVKAGEVPVKVLKRSMKCSKEEAGDDNDYAEVDHQGITSLYGKWQ 876
            VQTL T+ERWLREGLQ+K  E P+KVL++S K  K    +D    E+D +    LYGKWQ
Sbjct: 701  VQTLKTRERWLREGLQIKGTETPIKVLEQSSKLKKVRVSED-VCDEIDSKETIELYGKWQ 759

Query: 875  TEPLCLPRAVNGIVPKNERGQVDVWSEKCLPPGTIHLRLPRVATVARRLDIDFAPAMVGF 696
             EPL LPRAVNGIVPKNE GQVDVWSEKCLPPGT+HLRLPRV  VA+RL+ID+APAMVGF
Sbjct: 760  LEPLLLPRAVNGIVPKNEHGQVDVWSEKCLPPGTVHLRLPRVFVVAKRLEIDYAPAMVGF 819

Query: 695  DFRNGRSVPLFEGIVVCTEFKDAILXXXXXXXXXXXXXXXXXXXAQALSRWYQLLSSIIT 516
            +FRNGR+VP+++GIVVCTEFKDAIL                   AQA+SRWYQLLSS+IT
Sbjct: 820  EFRNGRAVPVYDGIVVCTEFKDAILEAYAEEEERRAAVEKKRTEAQAISRWYQLLSSVIT 879

Query: 515  RKRLNECYGDGALPQSSIEIPKSGDKCYNSSATATATQKTEASPECQQVNIPEKLNAPSS 336
            R++LN  Y D +  Q S  I    DK   +     +++ ++     ++ N  +  +  S 
Sbjct: 880  RQKLNSYYRDSSSSQPSGNIQ---DKNIETKTPVQSSKDSKQPTAHRKANNQDTTHTTSL 936

Query: 335  MPTE-NHEHEFILDEKKVDEGGLTRIKRCHCGFSIQFEEL 219
            +  E  HEH F+   +  D     R KRC CGFSIQ EEL
Sbjct: 937  VALEVGHEHVFLTKNESFDPENSIRTKRCECGFSIQVEEL 976