BLASTX nr result

ID: Rehmannia28_contig00008032 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00008032
         (867 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_006576520.1| movement protein [Amazon lily mild mottle vi...   299   3e-98
ref|YP_009104376.1| putative movement protein [Cassava Ivorian b...   278   7e-90
ref|NP_619772.1| putative movement protein [Pelargonium zonate s...   139   1e-35
gb|ADE87484.1| movement protein, partial [Pelargonium zonate spo...   136   1e-35
gb|AHG25373.3| movement protein [Pelargonium zonate spot virus]       138   2e-35
gb|AFU72535.1| putative movement protein [Pelargonium zonate spo...   138   2e-35
gb|ACS72229.1| movement protein, partial [Pelargonium zonate spo...   130   4e-33

>ref|YP_006576520.1| movement protein [Amazon lily mild mottle virus]
           gi|398650496|dbj|BAM34545.1| movement protein [Amazon
           lily mild mottle virus]
          Length = 296

 Score =  299 bits (765), Expect = 3e-98
 Identities = 149/167 (89%), Positives = 158/167 (94%), Gaps = 1/167 (0%)
 Frame = -3

Query: 865 PDTSFEMALSSLPRVCLLTTDYDLPLSKKPIKLGDRGEMRRMFLLTAKVTGLVGAGDALS 686
           PDTSFEM+LSSLPRVCLLTTDYDLPL KK IKLGDRGEMRRMFLL+AKVTGLVGAGDALS
Sbjct: 122 PDTSFEMSLSSLPRVCLLTTDYDLPLGKKTIKLGDRGEMRRMFLLSAKVTGLVGAGDALS 181

Query: 685 LFPIWDCDFRSSCNNYEVVPCTSVPITRCIRSDVLSCVAELNRYVKGTLLSLPRSSVSGA 506
           LFPIWDCDFRSSCNNYEVVPCTSVPITRC+RSDVLSCVAELNRYVKGTLLSLPRSSVSG 
Sbjct: 182 LFPIWDCDFRSSCNNYEVVPCTSVPITRCVRSDVLSCVAELNRYVKGTLLSLPRSSVSGT 241

Query: 505 RFAAPKLINQNESESDSSTAVVPESAGVRSAPPQ-GLAQSPALFNGV 368
           RFAAP+LINQNE ++DSSTAVVPESAGV+ A PQ   +Q+PALFNGV
Sbjct: 242 RFAAPELINQNEFDADSSTAVVPESAGVKLAAPQSSFSQAPALFNGV 288


>ref|YP_009104376.1| putative movement protein [Cassava Ivorian bacilliform virus]
           gi|586908847|gb|AHJ89007.1| putative movement protein
           [Cassava Ivorian bacilliform virus]
          Length = 302

 Score =  278 bits (710), Expect = 7e-90
 Identities = 145/186 (77%), Positives = 157/186 (84%), Gaps = 11/186 (5%)
 Frame = -3

Query: 865 PDTSFEMALSSLPRVCLLTTDYDLPLSKKPIKLGDRGEMRRMFLLTAKVTGLVGAGDALS 686
           PDTSFEM+LS LPRVCLLTTDYDLPL KK IKLGDRGEMRRMFLL+AKV+GLVGAGDALS
Sbjct: 120 PDTSFEMSLSQLPRVCLLTTDYDLPLGKKTIKLGDRGEMRRMFLLSAKVSGLVGAGDALS 179

Query: 685 LFPIWDCDFRSSCNNYEVVPCTSVPITRCIRSDVLSCVAELNRYVKGTLLSLPRSSVSGA 506
           LFPIWDCDFRSSCNNYEVVPCTSVPI+RCIRSDVLSCVAELNRYVKGTLLSLPRSSVSG 
Sbjct: 180 LFPIWDCDFRSSCNNYEVVPCTSVPISRCIRSDVLSCVAELNRYVKGTLLSLPRSSVSGT 239

Query: 505 RFAAPKLINQNESESDSSTAVVPESAG-------VRSAPPQ----GLAQSPALFNGVEDV 359
           RFAAP+LINQNESE DS+ AV  ESAG       V++  P      +   PALFNGVE+ 
Sbjct: 240 RFAAPELINQNESEPDSNAAVASESAGVVVPGSAVQTTDPTLSGGSVEVRPALFNGVEE- 298

Query: 358 SKEVIP 341
             +V+P
Sbjct: 299 --KVVP 302


>ref|NP_619772.1| putative movement protein [Pelargonium zonate spot virus]
           gi|81968683|sp|Q9DUT1.1|MVP_PZSVT RecName: Full=Movement
           protein; Short=MP; AltName: Full=Protein 3A
           gi|10185106|emb|CAC08528.1| putative movement protein
           [Pelargonium zonate spot virus]
          Length = 309

 Score =  139 bits (349), Expect = 1e-35
 Identities = 69/149 (46%), Positives = 93/149 (62%)
 Frame = -3

Query: 865 PDTSFEMALSSLPRVCLLTTDYDLPLSKKPIKLGDRGEMRRMFLLTAKVTGLVGAGDALS 686
           P      ALS LPR  +L  DYD+PL K  ++LG++ EMRRMF L  KV+G  G G A+S
Sbjct: 120 PGCQVVCALSDLPRAVMLVPDYDMPLGKSKLRLGNQ-EMRRMFFLHTKVSGFTGQGVAIS 178

Query: 685 LFPIWDCDFRSSCNNYEVVPCTSVPITRCIRSDVLSCVAELNRYVKGTLLSLPRSSVSGA 506
           LFP+WDCDFR +CNNY  VP  SV I R  R+ +L+CV +L +Y +  LL++P+S   G 
Sbjct: 179 LFPVWDCDFRGTCNNYVKVPAVSVGIDRTERTSLLNCVKQLKQYAENALLTMPQSISGGT 238

Query: 505 RFAAPKLINQNESESDSSTAVVPESAGVR 419
            FA P  ++ NES++  ST+        R
Sbjct: 239 SFARPSHLSLNESKTLPSTSTTEAEGSER 267


>gb|ADE87484.1| movement protein, partial [Pelargonium zonate spot virus]
          Length = 229

 Score =  136 bits (343), Expect = 1e-35
 Identities = 66/135 (48%), Positives = 89/135 (65%)
 Frame = -3

Query: 865 PDTSFEMALSSLPRVCLLTTDYDLPLSKKPIKLGDRGEMRRMFLLTAKVTGLVGAGDALS 686
           P      ALS LPR  +L  DYD+PL K  ++LG++ EMRRMF L  KV+G  G G A+S
Sbjct: 96  PGCQVVCALSDLPRAVMLVPDYDMPLGKSKLRLGNQ-EMRRMFFLHTKVSGFTGQGVAIS 154

Query: 685 LFPIWDCDFRSSCNNYEVVPCTSVPITRCIRSDVLSCVAELNRYVKGTLLSLPRSSVSGA 506
           LFP+WDCDFR +CNNY  VP  SV I R  R+ +L+CV +L +Y +  LL++P+S   G 
Sbjct: 155 LFPVWDCDFRGTCNNYVKVPAVSVGIDRIERTSLLNCVKQLKQYAENALLTMPQSISGGT 214

Query: 505 RFAAPKLINQNESES 461
            FA P  ++ NES++
Sbjct: 215 SFARPSHLSLNESKT 229


>gb|AHG25373.3| movement protein [Pelargonium zonate spot virus]
          Length = 309

 Score =  138 bits (348), Expect = 2e-35
 Identities = 69/149 (46%), Positives = 93/149 (62%)
 Frame = -3

Query: 865 PDTSFEMALSSLPRVCLLTTDYDLPLSKKPIKLGDRGEMRRMFLLTAKVTGLVGAGDALS 686
           P      ALS LPR  +L  DYD+PL K  ++LG++ EMRRMF L  KV+G  G G A+S
Sbjct: 120 PGCQVVCALSDLPRAVMLVPDYDMPLGKSKLRLGNQ-EMRRMFFLHTKVSGFTGQGVAIS 178

Query: 685 LFPIWDCDFRSSCNNYEVVPCTSVPITRCIRSDVLSCVAELNRYVKGTLLSLPRSSVSGA 506
           LFP+WDCDFR +CNNY  VP  SV I R  R+ +L+CV +L +Y +  LL++P+S   G 
Sbjct: 179 LFPVWDCDFRGTCNNYVKVPAVSVGIDRTERTSLLNCVKQLKQYAENALLTMPQSISGGT 238

Query: 505 RFAAPKLINQNESESDSSTAVVPESAGVR 419
            FA P  ++ NES++  ST+        R
Sbjct: 239 SFARPSHLSFNESKTLPSTSTTEAEGSER 267


>gb|AFU72535.1| putative movement protein [Pelargonium zonate spot virus]
          Length = 309

 Score =  138 bits (348), Expect = 2e-35
 Identities = 69/149 (46%), Positives = 93/149 (62%)
 Frame = -3

Query: 865 PDTSFEMALSSLPRVCLLTTDYDLPLSKKPIKLGDRGEMRRMFLLTAKVTGLVGAGDALS 686
           P      ALS LPR  +L  DYD+PL K  ++LG++ EMRRMF L  KV+G  G G A+S
Sbjct: 120 PGCQVVCALSDLPRAVMLVPDYDMPLGKSKLRLGNQ-EMRRMFFLHTKVSGFTGQGVAIS 178

Query: 685 LFPIWDCDFRSSCNNYEVVPCTSVPITRCIRSDVLSCVAELNRYVKGTLLSLPRSSVSGA 506
           LFP+WDCDFR +CNNY  VP  SV I R  R+ +L+CV +L +Y +  LL++P+S   G 
Sbjct: 179 LFPVWDCDFRGTCNNYVKVPAVSVGIDRTERTSLLNCVKQLKQYAENALLTMPQSISGGT 238

Query: 505 RFAAPKLINQNESESDSSTAVVPESAGVR 419
            FA P  ++ NES++  ST+        R
Sbjct: 239 SFARPSHLSFNESKTLPSTSTTEAEGSER 267


>gb|ACS72229.1| movement protein, partial [Pelargonium zonate spot virus]
           gi|241913637|gb|ACS72230.1| movement protein, partial
           [Pelargonium zonate spot virus]
          Length = 231

 Score =  130 bits (326), Expect = 4e-33
 Identities = 63/125 (50%), Positives = 81/125 (64%)
 Frame = -3

Query: 865 PDTSFEMALSSLPRVCLLTTDYDLPLSKKPIKLGDRGEMRRMFLLTAKVTGLVGAGDALS 686
           P      ALS LPR  +L  DYD+PL K  ++LG++ EMRRMF L  KV+G  G G A+S
Sbjct: 103 PGCQVVCALSDLPRAVMLVPDYDMPLGKSKLRLGNQ-EMRRMFFLHTKVSGFTGQGVAIS 161

Query: 685 LFPIWDCDFRSSCNNYEVVPCTSVPITRCIRSDVLSCVAELNRYVKGTLLSLPRSSVSGA 506
           LFP+WDCDFR +CNNY  VP  SV I R  R+ +L+CV +L  Y +  LL++P+S   G 
Sbjct: 162 LFPVWDCDFRGTCNNYVKVPAVSVGIDRTERTSLLNCVKQLKHYAENALLTMPQSISGGT 221

Query: 505 RFAAP 491
            FA P
Sbjct: 222 SFAHP 226


Top