BLASTX nr result
ID: Rehmannia28_contig00007358
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia28_contig00007358
(343 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011100421.1| PREDICTED: U1 small nuclear ribonucleoprotei... 79 2e-15
gb|KDO73528.1| hypothetical protein CISIN_1g0261891mg, partial [... 69 3e-12
ref|XP_006474442.1| PREDICTED: RNA-binding protein 1-like isofor... 69 4e-12
ref|XP_006474441.1| PREDICTED: RNA-binding protein 1-like isofor... 69 5e-12
ref|XP_006453055.1| hypothetical protein CICLE_v10009319mg [Citr... 69 5e-12
ref|XP_006474440.1| PREDICTED: RNA-binding protein 2-like isofor... 69 7e-12
ref|XP_006474439.1| PREDICTED: RNA-binding protein 2-like isofor... 69 7e-12
ref|XP_011100490.1| PREDICTED: U1 small nuclear ribonucleoprotei... 69 9e-12
ref|XP_012847294.1| PREDICTED: U1 small nuclear ribonucleoprotei... 68 2e-11
emb|CDP08296.1| unnamed protein product [Coffea canephora] 63 4e-10
gb|KCW79254.1| hypothetical protein EUGRSUZ_C00672 [Eucalyptus g... 63 4e-10
gb|KCW79255.1| hypothetical protein EUGRSUZ_C00672 [Eucalyptus g... 63 6e-10
ref|XP_010047367.1| PREDICTED: uncharacterized protein LOC104436... 63 8e-10
ref|XP_010047366.1| PREDICTED: uncharacterized protein LOC104436... 63 9e-10
ref|XP_008220513.1| PREDICTED: protein couch potato-like [Prunus... 62 3e-09
gb|KNA09697.1| hypothetical protein SOVF_151210 [Spinacia oleracea] 61 4e-09
ref|XP_002308540.2| hypothetical protein POPTR_0006s24130g [Popu... 61 9e-09
ref|XP_007224815.1| hypothetical protein PRUPE_ppa023547mg, part... 59 3e-08
ref|XP_011019404.1| PREDICTED: uncharacterized protein LOC105122... 59 4e-08
gb|KVI01528.1| Nucleotide-binding, alpha-beta plait [Cynara card... 58 1e-07
>ref|XP_011100421.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like isoform X1
[Sesamum indicum]
Length = 248
Score = 78.6 bits (192), Expect = 2e-15
Identities = 46/89 (51%), Positives = 58/89 (65%), Gaps = 3/89 (3%)
Frame = +2
Query: 5 IRKPSFPDYLT*SIM-LTTPDPYNN-DSRG-TSDFLHKDVLSSRPETYSLNYISGIRSEP 175
I KPSFP YL + LT PY++ D R +SDF KD+L SR Y ++ +GIRSEP
Sbjct: 25 IPKPSFPGYLPSEVSTLTNYYPYSSRDLRAASSDFPQKDILPSRAGAYGVDDFAGIRSEP 84
Query: 176 GVSGLSAGASIRGYQSPFEDPNLHGHGRD 262
G+SGL+AG S +GY S FEDP+L RD
Sbjct: 85 GISGLTAGTSFKGYPSSFEDPSLLVRQRD 113
>gb|KDO73528.1| hypothetical protein CISIN_1g0261891mg, partial [Citrus sinensis]
Length = 206
Score = 69.3 bits (168), Expect = 3e-12
Identities = 40/90 (44%), Positives = 53/90 (58%), Gaps = 4/90 (4%)
Frame = +2
Query: 5 IRKPSFPDYLT*SI-MLTTPDPYN-NDSRGTSDFLHKDVLSSRPETYSLNYISGI--RSE 172
+ +PSF YLT LT+ P + N RG SDFLH++V RP L +G+ E
Sbjct: 18 VARPSFAGYLTSEAPSLTSQQPLSSNGFRGASDFLHREVTPMRPGALGLVDTAGVGVHPE 77
Query: 173 PGVSGLSAGASIRGYQSPFEDPNLHGHGRD 262
PG+ G++A AS++GY SP DPNL G RD
Sbjct: 78 PGMVGITAVASVKGYSSPLPDPNLIGQRRD 107
>ref|XP_006474442.1| PREDICTED: RNA-binding protein 1-like isoform X4 [Citrus sinensis]
gi|343887275|dbj|BAK61821.1| RRM-containing protein
[Citrus unshiu]
Length = 231
Score = 69.3 bits (168), Expect = 4e-12
Identities = 40/90 (44%), Positives = 53/90 (58%), Gaps = 4/90 (4%)
Frame = +2
Query: 5 IRKPSFPDYLT*SI-MLTTPDPYN-NDSRGTSDFLHKDVLSSRPETYSLNYISGI--RSE 172
+ +PSF YLT LT+ P + N RG SDFLH++V RP L +G+ E
Sbjct: 18 VARPSFAGYLTSEAPSLTSQQPLSSNGFRGASDFLHREVTPMRPGALGLVDTAGVGVHPE 77
Query: 173 PGVSGLSAGASIRGYQSPFEDPNLHGHGRD 262
PG+ G++A AS++GY SP DPNL G RD
Sbjct: 78 PGMVGITAVASVKGYSSPLPDPNLIGQRRD 107
>ref|XP_006474441.1| PREDICTED: RNA-binding protein 1-like isoform X3 [Citrus sinensis]
Length = 242
Score = 69.3 bits (168), Expect = 5e-12
Identities = 40/90 (44%), Positives = 53/90 (58%), Gaps = 4/90 (4%)
Frame = +2
Query: 5 IRKPSFPDYLT*SI-MLTTPDPYN-NDSRGTSDFLHKDVLSSRPETYSLNYISGI--RSE 172
+ +PSF YLT LT+ P + N RG SDFLH++V RP L +G+ E
Sbjct: 18 VARPSFAGYLTSEAPSLTSQQPLSSNGFRGASDFLHREVTPMRPGALGLVDTAGVGVHPE 77
Query: 173 PGVSGLSAGASIRGYQSPFEDPNLHGHGRD 262
PG+ G++A AS++GY SP DPNL G RD
Sbjct: 78 PGMVGITAVASVKGYSSPLPDPNLIGQRRD 107
>ref|XP_006453055.1| hypothetical protein CICLE_v10009319mg [Citrus clementina]
gi|557556281|gb|ESR66295.1| hypothetical protein
CICLE_v10009319mg [Citrus clementina]
Length = 242
Score = 69.3 bits (168), Expect = 5e-12
Identities = 40/90 (44%), Positives = 53/90 (58%), Gaps = 4/90 (4%)
Frame = +2
Query: 5 IRKPSFPDYLT*SI-MLTTPDPYN-NDSRGTSDFLHKDVLSSRPETYSLNYISGI--RSE 172
+ +PSF YLT LT+ P + N RG SDFLH++V RP L +G+ E
Sbjct: 18 VARPSFAGYLTSEAPSLTSQQPLSSNGFRGASDFLHREVTPMRPGALGLVDTAGVGVHPE 77
Query: 173 PGVSGLSAGASIRGYQSPFEDPNLHGHGRD 262
PG+ G++A AS++GY SP DPNL G RD
Sbjct: 78 PGMVGITAVASVKGYSSPLPDPNLIGQRRD 107
>ref|XP_006474440.1| PREDICTED: RNA-binding protein 2-like isoform X2 [Citrus sinensis]
Length = 276
Score = 69.3 bits (168), Expect = 7e-12
Identities = 40/90 (44%), Positives = 53/90 (58%), Gaps = 4/90 (4%)
Frame = +2
Query: 5 IRKPSFPDYLT*SI-MLTTPDPYN-NDSRGTSDFLHKDVLSSRPETYSLNYISGI--RSE 172
+ +PSF YLT LT+ P + N RG SDFLH++V RP L +G+ E
Sbjct: 63 VARPSFAGYLTSEAPSLTSQQPLSSNGFRGASDFLHREVTPMRPGALGLVDTAGVGVHPE 122
Query: 173 PGVSGLSAGASIRGYQSPFEDPNLHGHGRD 262
PG+ G++A AS++GY SP DPNL G RD
Sbjct: 123 PGMVGITAVASVKGYSSPLPDPNLIGQRRD 152
>ref|XP_006474439.1| PREDICTED: RNA-binding protein 2-like isoform X1 [Citrus sinensis]
Length = 287
Score = 69.3 bits (168), Expect = 7e-12
Identities = 40/90 (44%), Positives = 53/90 (58%), Gaps = 4/90 (4%)
Frame = +2
Query: 5 IRKPSFPDYLT*SI-MLTTPDPYN-NDSRGTSDFLHKDVLSSRPETYSLNYISGI--RSE 172
+ +PSF YLT LT+ P + N RG SDFLH++V RP L +G+ E
Sbjct: 63 VARPSFAGYLTSEAPSLTSQQPLSSNGFRGASDFLHREVTPMRPGALGLVDTAGVGVHPE 122
Query: 173 PGVSGLSAGASIRGYQSPFEDPNLHGHGRD 262
PG+ G++A AS++GY SP DPNL G RD
Sbjct: 123 PGMVGITAVASVKGYSSPLPDPNLIGQRRD 152
>ref|XP_011100490.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like isoform X2
[Sesamum indicum]
Length = 239
Score = 68.6 bits (166), Expect = 9e-12
Identities = 38/73 (52%), Positives = 49/73 (67%), Gaps = 2/73 (2%)
Frame = +2
Query: 50 LTTPDPYNN-DSRG-TSDFLHKDVLSSRPETYSLNYISGIRSEPGVSGLSAGASIRGYQS 223
LT PY++ D R +SDF KD+L SR Y ++ +GIRSEPG+SGL+AG S +GY S
Sbjct: 32 LTNYYPYSSRDLRAASSDFPQKDILPSRAGAYGVDDFAGIRSEPGISGLTAGTSFKGYPS 91
Query: 224 PFEDPNLHGHGRD 262
FEDP+L RD
Sbjct: 92 SFEDPSLLVRQRD 104
>ref|XP_012847294.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like [Erythranthe
guttata] gi|848894513|ref|XP_012847295.1| PREDICTED: U1
small nuclear ribonucleoprotein A-like [Erythranthe
guttata] gi|604317263|gb|EYU29339.1| hypothetical
protein MIMGU_mgv1a012896mg [Erythranthe guttata]
Length = 237
Score = 67.8 bits (164), Expect = 2e-11
Identities = 49/108 (45%), Positives = 61/108 (56%), Gaps = 3/108 (2%)
Frame = +2
Query: 5 IRKPSFPDYL-T*SIMLTTPDPYNN-DSRGTS-DFLHKDVLSSRPETYSLNYISGIRSEP 175
I + SFP YL T + LT +PY++ D R DFL KD++ SR Y + I SEP
Sbjct: 25 IPQASFPGYLSTEASTLTNYNPYSSIDLRAPPLDFLQKDIVPSRGGAYR---VDDIHSEP 81
Query: 176 GVSGLSAGASIRGYQSPFEDPNLHGHGRDGLGVSGLTAGASLKSYQTP 319
GVSGL G+S R Y S F+DPNL RD VSG ++G SY P
Sbjct: 82 GVSGLIGGSSFRDYPSSFDDPNLLVRQRD--VVSGTSSGVPDVSYGRP 127
>emb|CDP08296.1| unnamed protein product [Coffea canephora]
Length = 160
Score = 62.8 bits (151), Expect = 4e-10
Identities = 33/73 (45%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
Frame = +2
Query: 47 MLTTPDPYN-NDSRGTSDFLHKDVLSSRPETYSLNYISGIRSEPGVSGLSAGASIRGYQS 223
ML TP ++ ND +G+SD+L KD+L S P Y ++ + I E G+ GL++G SIRGY S
Sbjct: 38 MLMTPHLWSSNDGKGSSDYLGKDILQSHPGAYGID-VWHIHPETGLGGLTSGTSIRGYPS 96
Query: 224 PFEDPNLHGHGRD 262
P DP+ G D
Sbjct: 97 PLRDPSSLGQRPD 109
>gb|KCW79254.1| hypothetical protein EUGRSUZ_C00672 [Eucalyptus grandis]
Length = 181
Score = 63.2 bits (152), Expect = 4e-10
Identities = 45/121 (37%), Positives = 63/121 (52%), Gaps = 12/121 (9%)
Frame = +2
Query: 11 KPSFPDYL---T*SIMLTTPDPYNNDSRGTSDFLHKDVLSSRPETYSLNYI--SGIRSEP 175
+ SFP YL T S+ Y + +SD L KDV P TY ++ I GIR EP
Sbjct: 20 RASFPGYLSSETPSLASRHAFGYGDQRTFSSDALQKDVNPVGPGTYGVDDILGRGIRPEP 79
Query: 176 GVSGLSAGASIRGYQSPFEDPNLHGHGRDGLGVSGLTA----GASLKSYQT---PFEDSN 334
G L+AGA +RGY SP EDP LH G+S + + +SL+++ + P +SN
Sbjct: 80 GTRRLAAGARLRGYSSPLEDPVLHQRQDFSAGISPIISATERSSSLRNFDSLAEPARESN 139
Query: 335 L 337
+
Sbjct: 140 I 140
>gb|KCW79255.1| hypothetical protein EUGRSUZ_C00672 [Eucalyptus grandis]
Length = 205
Score = 63.2 bits (152), Expect = 6e-10
Identities = 45/121 (37%), Positives = 63/121 (52%), Gaps = 12/121 (9%)
Frame = +2
Query: 11 KPSFPDYL---T*SIMLTTPDPYNNDSRGTSDFLHKDVLSSRPETYSLNYI--SGIRSEP 175
+ SFP YL T S+ Y + +SD L KDV P TY ++ I GIR EP
Sbjct: 20 RASFPGYLSSETPSLASRHAFGYGDQRTFSSDALQKDVNPVGPGTYGVDDILGRGIRPEP 79
Query: 176 GVSGLSAGASIRGYQSPFEDPNLHGHGRDGLGVSGLTA----GASLKSYQT---PFEDSN 334
G L+AGA +RGY SP EDP LH G+S + + +SL+++ + P +SN
Sbjct: 80 GTRRLAAGARLRGYSSPLEDPVLHQRQDFSAGISPIISATERSSSLRNFDSLAEPARESN 139
Query: 335 L 337
+
Sbjct: 140 I 140
>ref|XP_010047367.1| PREDICTED: uncharacterized protein LOC104436324 isoform X2
[Eucalyptus grandis] gi|629114578|gb|KCW79253.1|
hypothetical protein EUGRSUZ_C00672 [Eucalyptus grandis]
Length = 233
Score = 63.2 bits (152), Expect = 8e-10
Identities = 45/121 (37%), Positives = 63/121 (52%), Gaps = 12/121 (9%)
Frame = +2
Query: 11 KPSFPDYL---T*SIMLTTPDPYNNDSRGTSDFLHKDVLSSRPETYSLNYI--SGIRSEP 175
+ SFP YL T S+ Y + +SD L KDV P TY ++ I GIR EP
Sbjct: 20 RASFPGYLSSETPSLASRHAFGYGDQRTFSSDALQKDVNPVGPGTYGVDDILGRGIRPEP 79
Query: 176 GVSGLSAGASIRGYQSPFEDPNLHGHGRDGLGVSGLTA----GASLKSYQT---PFEDSN 334
G L+AGA +RGY SP EDP LH G+S + + +SL+++ + P +SN
Sbjct: 80 GTRRLAAGARLRGYSSPLEDPVLHQRQDFSAGISPIISATERSSSLRNFDSLAEPARESN 139
Query: 335 L 337
+
Sbjct: 140 I 140
>ref|XP_010047366.1| PREDICTED: uncharacterized protein LOC104436324 isoform X1
[Eucalyptus grandis]
Length = 239
Score = 63.2 bits (152), Expect = 9e-10
Identities = 45/121 (37%), Positives = 63/121 (52%), Gaps = 12/121 (9%)
Frame = +2
Query: 11 KPSFPDYL---T*SIMLTTPDPYNNDSRGTSDFLHKDVLSSRPETYSLNYI--SGIRSEP 175
+ SFP YL T S+ Y + +SD L KDV P TY ++ I GIR EP
Sbjct: 20 RASFPGYLSSETPSLASRHAFGYGDQRTFSSDALQKDVNPVGPGTYGVDDILGRGIRPEP 79
Query: 176 GVSGLSAGASIRGYQSPFEDPNLHGHGRDGLGVSGLTA----GASLKSYQT---PFEDSN 334
G L+AGA +RGY SP EDP LH G+S + + +SL+++ + P +SN
Sbjct: 80 GTRRLAAGARLRGYSSPLEDPVLHQRQDFSAGISPIISATERSSSLRNFDSLAEPARESN 139
Query: 335 L 337
+
Sbjct: 140 I 140
>ref|XP_008220513.1| PREDICTED: protein couch potato-like [Prunus mume]
Length = 250
Score = 62.0 bits (149), Expect = 3e-09
Identities = 43/121 (35%), Positives = 62/121 (51%), Gaps = 8/121 (6%)
Frame = +2
Query: 5 IRKPSFPDYL---T*SIMLTTPDPYNNDSRGTSDFLHKDVLSSRPETYSLNYISGIRSEP 175
+ +P+FP YL T S++ P +SDFL +D+ S P Y+++ GIR P
Sbjct: 19 VGRPTFPGYLSSETPSLLFDPTLPSTEPPSYSSDFLQRDIRSLTPGAYAVDDTGGIRFRP 78
Query: 176 ----GVSGLSAGASIRGYQSPFEDPNLHGHGRDGLGVS-GLTAGASLKSYQTPFEDSNLH 340
GV+ SAGASI+GY SP E P+L +D VS + A + + P SN+
Sbjct: 79 EPILGVAA-SAGASIKGYPSPLEVPSLLSQRQDAAAVSISASVSADISKERPPGSLSNVD 137
Query: 341 G 343
G
Sbjct: 138 G 138
>gb|KNA09697.1| hypothetical protein SOVF_151210 [Spinacia oleracea]
Length = 205
Score = 60.8 bits (146), Expect = 4e-09
Identities = 40/86 (46%), Positives = 49/86 (56%), Gaps = 4/86 (4%)
Frame = +2
Query: 74 NDSRGTS-DFLHKDVLSSRPETYSLNYISGI--RSEPGVSGLSAGASIRGYQSPFEDPNL 244
ND RG+S + L +DV+ R Y L+ ISG RSEP + GL+AG S RGY S EDP L
Sbjct: 9 NDLRGSSIEALGRDVVPMRSRVYGLDDISGFAARSEPVIGGLAAGMSTRGYASSLEDPVL 68
Query: 245 HGHGRD-GLGVSGLTAGASLKSYQTP 319
RD LG+S L G Y+ P
Sbjct: 69 ISQRRDIPLGISSLPPGNPDMIYERP 94
>ref|XP_002308540.2| hypothetical protein POPTR_0006s24130g [Populus trichocarpa]
gi|550336974|gb|EEE92063.2| hypothetical protein
POPTR_0006s24130g [Populus trichocarpa]
Length = 476
Score = 61.2 bits (147), Expect = 9e-09
Identities = 40/118 (33%), Positives = 63/118 (53%), Gaps = 7/118 (5%)
Frame = +2
Query: 5 IRKPSFPDYLT*SI--MLTTPDPYNNDSRG-TSDFLHKDVLSSRPETYSLNYISGI--RS 169
+ + SFP Y++ + + P + + G +SDFL +D+ + +Y LN SG+ R
Sbjct: 17 VSRLSFPGYVSTEAPPLASHSFPVSTEFPGASSDFLQRDINPLQLGSYGLNGYSGVGFRP 76
Query: 170 EPGVSGLSAGASIRGYQSPFEDPNLHGHGRDGL--GVSGLTAGASLKSYQTPFEDSNL 337
EP + G+ GAS +GY SP EDP+L D + G G++ K Y +P ED +L
Sbjct: 77 EPVIGGVMPGASGKGYSSPLEDPSLLAQRGDASMHAIGGAIPGSTGKGYPSPLEDPSL 134
>ref|XP_007224815.1| hypothetical protein PRUPE_ppa023547mg, partial [Prunus persica]
gi|462421751|gb|EMJ26014.1| hypothetical protein
PRUPE_ppa023547mg, partial [Prunus persica]
Length = 251
Score = 59.3 bits (142), Expect = 3e-08
Identities = 43/121 (35%), Positives = 61/121 (50%), Gaps = 8/121 (6%)
Frame = +2
Query: 5 IRKPSFPDYL---T*SIMLTTPDPYNNDSRGTSDFLHKDVLSSRPETYSLNYISGIRSEP 175
+ +PSFP YL T S++ P +SDFL +D+ S P Y+++ GIR P
Sbjct: 19 VGRPSFPGYLSSETPSLLFDPTLPSTEPPSYSSDFLQRDIRSLTPGAYAVDDTGGIRFRP 78
Query: 176 ----GVSGLSAGASIRGYQSPFEDPNLHGHGRDGLGVS-GLTAGASLKSYQTPFEDSNLH 340
GV+ SAGASI+GY SP E P+L + VS + A + + P SN+
Sbjct: 79 EPILGVAA-SAGASIKGYPSPLEVPSLLSQRQAAAAVSISASVPADISKERPPGSLSNVD 137
Query: 341 G 343
G
Sbjct: 138 G 138
>ref|XP_011019404.1| PREDICTED: uncharacterized protein LOC105122162 [Populus
euphratica]
Length = 279
Score = 58.9 bits (141), Expect = 4e-08
Identities = 40/118 (33%), Positives = 60/118 (50%), Gaps = 7/118 (5%)
Frame = +2
Query: 5 IRKPSFPDYLT*SI--MLTTPDPYNNDSRGTS-DFLHKDVLSSRPETYSLNYISGI--RS 169
+ + SFP Y++ + + P + + G S DFL +D+ + +Y LN SG+ R
Sbjct: 17 VSRLSFPGYVSTEAPPLASHSIPVSTEFPGASLDFLQRDINPLQLGSYGLNGYSGVGFRP 76
Query: 170 EPGVSGLSAGASIRGYQSPFEDPNLHGHGRDGL--GVSGLTAGASLKSYQTPFEDSNL 337
EP + G+ GAS +GY SP E P+L D + G GA+ K Y +P ED L
Sbjct: 77 EPVIGGVMPGASGKGYSSPLEHPSLLAQRGDASMHAIGGAIPGATGKGYPSPLEDPGL 134
>gb|KVI01528.1| Nucleotide-binding, alpha-beta plait [Cynara cardunculus var.
scolymus]
Length = 330
Score = 57.8 bits (138), Expect = 1e-07
Identities = 40/90 (44%), Positives = 50/90 (55%), Gaps = 5/90 (5%)
Frame = +2
Query: 17 SFPDYLT*S-IMLTTPDPY--NNDSRGTSDFLHKDVLSSRPETYSLNYISGI--RSEPGV 181
+FP YLT MLT+ P+ ++ +SDF+ KD L SRP Y + I GI RSE G
Sbjct: 22 AFPGYLTSEPSMLTSRPPWASHDPLSNSSDFMQKDNLVSRPGAYGSDDIVGISVRSESGF 81
Query: 182 SGLSAGASIRGYQSPFEDPNLHGHGRDGLG 271
SG + GAS+ GY S DP L G LG
Sbjct: 82 SGYTGGASLNGYPSTLGDPYLLGRRDVTLG 111