BLASTX nr result
ID: Rehmannia28_contig00005875
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia28_contig00005875
(1142 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_015080640.1| PREDICTED: pentatricopeptide repeat-containi... 54 3e-07
ref|XP_004243699.1| PREDICTED: pentatricopeptide repeat-containi... 54 4e-07
ref|XP_011024024.1| PREDICTED: pentatricopeptide repeat-containi... 52 5e-07
gb|KVI06210.1| Iron/zinc purple acid phosphatase-like C-terminal... 52 6e-07
ref|XP_002322250.2| hypothetical protein POPTR_0015s10720g [Popu... 51 7e-07
ref|XP_006367434.1| PREDICTED: pentatricopeptide repeat-containi... 53 7e-07
ref|XP_009597258.1| PREDICTED: pentatricopeptide repeat-containi... 51 9e-07
ref|XP_009768933.1| PREDICTED: pentatricopeptide repeat-containi... 51 1e-06
ref|XP_012830580.1| PREDICTED: pentatricopeptide repeat-containi... 45 4e-06
>ref|XP_015080640.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
chloroplastic [Solanum pennellii]
Length = 704
Score = 53.9 bits (128), Expect(2) = 3e-07
Identities = 33/69 (47%), Positives = 42/69 (60%), Gaps = 4/69 (5%)
Frame = +3
Query: 453 LFSLMI--GTGLELISQGQQLHLCA*KMD*VE**FIVSCIFMLYSKCGTI--VSFFFYKM 620
+F+ MI +GLE+IS GQQLH CA KM + FI + +YSKCG+I F F M
Sbjct: 234 IFATMIRASSGLEVISLGQQLHCCALKMGEGDNRFISCALIDMYSKCGSIEDAQFVFDNM 293
Query: 621 PQKTHRGMN 647
P+KT G N
Sbjct: 294 PEKTTVGWN 302
Score = 29.6 bits (65), Expect(2) = 3e-07
Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +2
Query: 683 KALSM*CEMQDLASKWT-ILCTWLLHNLYKLASSEHAKQAHASLV 814
+AL + EM+D K + ++ +LAS EHAKQAHA LV
Sbjct: 316 EALCLYYEMRDAGVKMDHFTFSIIIRVCTRLASLEHAKQAHAGLV 360
>ref|XP_004243699.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
chloroplastic [Solanum lycopersicum]
Length = 704
Score = 53.5 bits (127), Expect(2) = 4e-07
Identities = 33/69 (47%), Positives = 42/69 (60%), Gaps = 4/69 (5%)
Frame = +3
Query: 453 LFSLMI--GTGLELISQGQQLHLCA*KMD*VE**FIVSCIFMLYSKCGTI--VSFFFYKM 620
+F+ MI +GLE+IS GQQLH CA KM + FI + +YSKCG+I F F M
Sbjct: 234 IFATMIRASSGLEVISLGQQLHSCALKMGEGDNRFISCALIDMYSKCGSIEDAQFVFDNM 293
Query: 621 PQKTHRGMN 647
P+KT G N
Sbjct: 294 PEKTTVGWN 302
Score = 29.6 bits (65), Expect(2) = 4e-07
Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +2
Query: 683 KALSM*CEMQDLASKWT-ILCTWLLHNLYKLASSEHAKQAHASLV 814
+AL + EM+D K + ++ +LAS EHAKQAHA LV
Sbjct: 316 EALCLYYEMRDAGVKMDHFTFSIIIRVCTRLASLEHAKQAHAGLV 360
>ref|XP_011024024.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
chloroplastic [Populus euphratica]
Length = 704
Score = 51.6 bits (122), Expect(2) = 5e-07
Identities = 31/68 (45%), Positives = 41/68 (60%), Gaps = 4/68 (5%)
Frame = +3
Query: 456 FSLMI--GTGLELISQGQQLHLCA*KMD*VE**FIVSCIFMLYSKCGTI--VSFFFYKMP 623
F++MI GLELIS G+QLH C KM + F+ + +YSKCG+I F F +MP
Sbjct: 235 FAVMIRASAGLELISIGRQLHACTLKMGIEDDIFVSCALIDMYSKCGSIEDARFVFEEMP 294
Query: 624 QKTHRGMN 647
+KT G N
Sbjct: 295 EKTTVGWN 302
Score = 31.2 bits (69), Expect(2) = 5e-07
Identities = 19/45 (42%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = +2
Query: 683 KALSM*CEMQDLASKWT-ILCTWLLHNLYKLASSEHAKQAHASLV 814
+AL M EM+D K + ++ +LAS EHAKQAHA+L+
Sbjct: 316 EALDMYYEMRDSGVKMDHFTFSMIVRICARLASVEHAKQAHAALI 360
>gb|KVI06210.1| Iron/zinc purple acid phosphatase-like C-terminal domain-containing
protein [Cynara cardunculus var. scolymus]
Length = 1346
Score = 52.4 bits (124), Expect(2) = 6e-07
Identities = 30/59 (50%), Positives = 36/59 (61%), Gaps = 2/59 (3%)
Frame = +3
Query: 477 GLELISQGQQLHLCA*KMD*VE**FIVSCIFMLYSKCGTI--VSFFFYKMPQKTHRGMN 647
GLE+IS GQQLH CA KMD + F+ + +YSKCG+I F MPQKT G N
Sbjct: 242 GLEMISPGQQLHACAIKMDVDQDIFVSCALIDMYSKCGSIEDAQCVFDVMPQKTTVGWN 300
Score = 30.0 bits (66), Expect(2) = 6e-07
Identities = 19/45 (42%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +2
Query: 683 KALSM*CEMQDLASKWT-ILCTWLLHNLYKLASSEHAKQAHASLV 814
+AL + EMQD K + ++ +L S EHAKQAHA LV
Sbjct: 314 EALDLYYEMQDSGVKMDHFTFSMIVRVCTRLGSLEHAKQAHAGLV 358
>ref|XP_002322250.2| hypothetical protein POPTR_0015s10720g [Populus trichocarpa]
gi|550322450|gb|EEF06377.2| hypothetical protein
POPTR_0015s10720g [Populus trichocarpa]
Length = 704
Score = 51.2 bits (121), Expect(2) = 7e-07
Identities = 31/68 (45%), Positives = 41/68 (60%), Gaps = 4/68 (5%)
Frame = +3
Query: 456 FSLMI--GTGLELISQGQQLHLCA*KMD*VE**FIVSCIFMLYSKCGTI--VSFFFYKMP 623
F++MI GLELIS G+QLH C KM + F+ + +YSKCG+I F F +MP
Sbjct: 235 FAVMIRASAGLELISIGRQLHACTLKMGIGDDIFVSCALIDMYSKCGSIEDARFVFEEMP 294
Query: 624 QKTHRGMN 647
+KT G N
Sbjct: 295 EKTTVGWN 302
Score = 31.2 bits (69), Expect(2) = 7e-07
Identities = 19/45 (42%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = +2
Query: 683 KALSM*CEMQDLASKWT-ILCTWLLHNLYKLASSEHAKQAHASLV 814
+AL M EM+D K + ++ +LAS EHAKQAHA+L+
Sbjct: 316 EALDMYYEMRDSGVKMDHFTFSMIVRICARLASVEHAKQAHAALI 360
>ref|XP_006367434.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
chloroplastic [Solanum tuberosum]
Length = 700
Score = 52.8 bits (125), Expect(2) = 7e-07
Identities = 33/69 (47%), Positives = 42/69 (60%), Gaps = 4/69 (5%)
Frame = +3
Query: 453 LFSLMIG--TGLELISQGQQLHLCA*KMD*VE**FIVSCIFMLYSKCGTI--VSFFFYKM 620
+F+ MI +GLE+IS GQQLH CA KM + FI + +YSKCG+I F F M
Sbjct: 230 IFATMIRACSGLEVISLGQQLHSCALKMGEGDNRFISCALIDMYSKCGSIEDAQFVFDNM 289
Query: 621 PQKTHRGMN 647
P+KT G N
Sbjct: 290 PEKTTVGWN 298
Score = 29.6 bits (65), Expect(2) = 7e-07
Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +2
Query: 683 KALSM*CEMQDLASKWT-ILCTWLLHNLYKLASSEHAKQAHASLV 814
+AL + EM+D K + ++ +LAS EHAKQAHA LV
Sbjct: 312 EALCLYYEMRDAGVKMDHFTFSIIIRVCTRLASLEHAKQAHAGLV 356
>ref|XP_009597258.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
chloroplastic [Nicotiana tomentosiformis]
Length = 702
Score = 51.2 bits (121), Expect(2) = 9e-07
Identities = 31/71 (43%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Frame = +3
Query: 441 TRIGLFSLMIGTGLELISQGQQLHLCA*KMD*VE**FIVSCIFMLYSKCGTI--VSFFFY 614
+RI + +GLE+IS GQQLH CA KM + F+ + +YSKCG+I F F
Sbjct: 230 SRIYATMIRASSGLEVISLGQQLHCCALKMGEDDNVFMSCALIDMYSKCGSIEDAQFVFD 289
Query: 615 KMPQKTHRGMN 647
+MP KT G N
Sbjct: 290 QMPVKTTVGWN 300
Score = 30.8 bits (68), Expect(2) = 9e-07
Identities = 20/45 (44%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +2
Query: 683 KALSM*CEMQDLASKWT-ILCTWLLHNLYKLASSEHAKQAHASLV 814
+AL M EM+D K + ++ +LAS EHAKQAHA LV
Sbjct: 314 EALRMYYEMRDAGVKMDHFTFSIIIRVCTRLASLEHAKQAHAGLV 358
>ref|XP_009768933.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
chloroplastic [Nicotiana sylvestris]
Length = 701
Score = 51.2 bits (121), Expect(2) = 1e-06
Identities = 31/71 (43%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Frame = +3
Query: 441 TRIGLFSLMIGTGLELISQGQQLHLCA*KMD*VE**FIVSCIFMLYSKCGTI--VSFFFY 614
+RI + +GLE+IS GQQLH CA KM + F+ + +YSKCG+I F F
Sbjct: 229 SRIYATMIRASSGLEVISLGQQLHCCALKMGEDDNVFMSCALIDMYSKCGSIEDAQFVFD 288
Query: 615 KMPQKTHRGMN 647
+MP KT G N
Sbjct: 289 QMPVKTTVGWN 299
Score = 30.0 bits (66), Expect(2) = 1e-06
Identities = 20/45 (44%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +2
Query: 683 KALSM*CEMQDLASKWT-ILCTWLLHNLYKLASSEHAKQAHASLV 814
+AL M EM+D K + ++ +LAS EHAKQAHA LV
Sbjct: 313 EALRMYYEMRDADVKMDHFTFSIIIRVCTRLASLEHAKQAHAGLV 357
>ref|XP_012830580.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
chloroplastic [Erythranthe guttata]
gi|604344270|gb|EYU43052.1| hypothetical protein
MIMGU_mgv1a0021231mg, partial [Erythranthe guttata]
Length = 703
Score = 45.4 bits (106), Expect(2) = 4e-06
Identities = 31/68 (45%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
Frame = +3
Query: 456 FSLMI--GTGLELISQGQQLHLCA*KMD*VE**FIVSCIFMLYSKCGTI--VSFFFYKMP 623
F+ MI GLELIS GQQLH CA KM + F+ + +YSKCG I F M
Sbjct: 234 FATMIRASAGLELISPGQQLHSCALKMGLSDDVFVSCTMIDMYSKCGNIDDARCVFDMMR 293
Query: 624 QKTHRGMN 647
+KT G N
Sbjct: 294 EKTTVGWN 301
Score = 34.3 bits (77), Expect(2) = 4e-06
Identities = 22/45 (48%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Frame = +2
Query: 683 KALSM*CEMQDLASKWT-ILCTWLLHNLYKLASSEHAKQAHASLV 814
+ALSM EMQD +K + ++ +LAS EHAKQAHA LV
Sbjct: 315 EALSMYHEMQDSGAKMDHFTYSIIVRVCTRLASLEHAKQAHAGLV 359