BLASTX nr result

ID: Rehmannia28_contig00005828 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00005828
         (1377 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_015959424.1| PREDICTED: uncharacterized protein LOC107483...    52   7e-07
ref|XP_008391838.1| PREDICTED: uncharacterized protein LOC103454...    49   1e-06
ref|XP_013709827.1| PREDICTED: uncharacterized protein LOC106413...    52   7e-06

>ref|XP_015959424.1| PREDICTED: uncharacterized protein LOC107483307 [Arachis
           duranensis]
          Length = 240

 Score = 52.0 bits (123), Expect(2) = 7e-07
 Identities = 22/49 (44%), Positives = 32/49 (65%)
 Frame = +2

Query: 443 MMVHVWNCRGLGGPSTIFQLKESIRLHLPDVIFLCETKKKNTFVKTVCK 589
           M + +WNCRGLG   T+  ++   R H P+V+FLCETK  ++FV   C+
Sbjct: 1   MKMLMWNCRGLGKTLTVHNIQGINRSHSPEVMFLCETKNNSSFVTRQCE 49



 Score = 30.8 bits (68), Expect(2) = 7e-07
 Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
 Frame = +1

Query: 580 GVQNS--VELVGTSGGLLVAWSNRKKIRNIASTQFNVEMELQLEDSNDFFW 726
           G  NS  V  +G +GGL++AW    +I  + S  F +  ++ L+ S + FW
Sbjct: 52  GFPNSFCVNPIGVAGGLVLAWRTEVQINVMESASFFIHFKV-LDTSRNKFW 101


>ref|XP_008391838.1| PREDICTED: uncharacterized protein LOC103454030 [Malus domestica]
          Length = 1374

 Score = 48.9 bits (115), Expect(3) = 1e-06
 Identities = 20/41 (48%), Positives = 28/41 (68%)
 Frame = +2

Query: 443 MMVHVWNCRGLGGPSTIFQLKESIRLHLPDVIFLCETKKKN 565
           M +  WNC+G+GG  T+  L E+ RLH PD++ L ETK K+
Sbjct: 1   MKLITWNCQGIGGDLTVDNLLEANRLHTPDIVILLETKNKS 41



 Score = 27.3 bits (59), Expect(3) = 1e-06
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = +1

Query: 607 GTSGGLLVAWSNRKKIRNIASTQFNVEMEL 696
           G SGGL V W +  ++  + S  F +EM++
Sbjct: 63  GLSGGLCVFWKDGSQVTLLKSENFVIEMKI 92



 Score = 24.6 bits (52), Expect(3) = 1e-06
 Identities = 8/18 (44%), Positives = 14/18 (77%)
 Frame = +3

Query: 732 SVYVSTDKVVRKEKWRSL 785
           ++Y STD+  RK++W+ L
Sbjct: 105 AIYASTDEKKRKDQWKRL 122


>ref|XP_013709827.1| PREDICTED: uncharacterized protein LOC106413636 [Brassica napus]
          Length = 1521

 Score = 52.4 bits (124), Expect(2) = 7e-06
 Identities = 24/47 (51%), Positives = 33/47 (70%)
 Frame = +2

Query: 443 MMVHVWNCRGLGGPSTIFQLKESIRLHLPDVIFLCETKKKNTFVKTV 583
           M V  WNCRGLG  ST+ +LKE  R +LPD+I L ETK+++  ++ V
Sbjct: 1   MKVTCWNCRGLGSDSTVQRLKEINRKYLPDIICLSETKQQDDHIRDV 47



 Score = 26.9 bits (58), Expect(2) = 7e-06
 Identities = 11/45 (24%), Positives = 26/45 (57%)
 Frame = +1

Query: 592 SVELVGTSGGLLVAWSNRKKIRNIASTQFNVEMELQLEDSNDFFW 726
           SV   G SGGL++ W    ++  ++S+   ++ ++ +  S+ F++
Sbjct: 58  SVPPRGLSGGLVIYWHQHVQLSILSSSPNLIDCKVSINGSSSFYF 102


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