BLASTX nr result
ID: Rehmannia28_contig00005347
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia28_contig00005347
(1259 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_013448488.1| DUF223 domain protein [Medicago truncatula] ... 39 1e-06
ref|XP_009761074.1| PREDICTED: replication protein A 70 kDa DNA-... 47 2e-06
ref|XP_012828681.1| PREDICTED: replication protein A 70 kDa DNA-... 39 3e-06
ref|XP_003606360.1| DUF223 domain protein [Medicago truncatula] ... 38 7e-06
ref|XP_013442703.1| plant OB fold protein, putative [Medicago tr... 37 1e-05
>ref|XP_013448488.1| DUF223 domain protein [Medicago truncatula]
gi|124359862|gb|ABD32456.2| Nucleic acid-binding,
OB-fold [Medicago truncatula]
gi|657377641|gb|KEH22515.1| DUF223 domain protein
[Medicago truncatula]
Length = 327
Score = 38.9 bits (89), Expect(3) = 1e-06
Identities = 17/47 (36%), Positives = 29/47 (61%)
Frame = +1
Query: 124 FNKFLCVNFFGILTDIIGRVVSIQSTQKAQVGGKSTRFLDITLEDLE 264
FN+ L + TD+IG V+ + ++ + G+ +R +D+TLEDLE
Sbjct: 126 FNEILSSTVEEVYTDVIGHVIERGNIRETEKDGRKSRVIDLTLEDLE 172
Score = 38.1 bits (87), Expect(3) = 1e-06
Identities = 14/42 (33%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
Frame = +2
Query: 341 NRMTCTLWEEYIDIILPYLEGNSRE-PIVVILQMCRAKVFKG 463
NR+ C+LW E++D I+ + + + P ++ILQ C+ +++ G
Sbjct: 174 NRLHCSLWGEHVDKIVTFFGNHDNDTPTILILQFCKTRMYLG 215
Score = 24.3 bits (51), Expect(3) = 1e-06
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = +3
Query: 585 VSNSFHITKLIVNGEEYEIKEFKNR 659
V+N+F+ TKLI+NG+ ++ + R
Sbjct: 219 VANAFNGTKLILNGDLPDVAVYMTR 243
>ref|XP_009761074.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit A-like
[Nicotiana sylvestris]
Length = 302
Score = 47.4 bits (111), Expect(3) = 2e-06
Identities = 17/42 (40%), Positives = 31/42 (73%)
Frame = +2
Query: 338 KNRMTCTLWEEYIDIILPYLEGNSREPIVVILQMCRAKVFKG 463
+N + T W E++D ILP+LEG+ +P++V++Q+ +A F+G
Sbjct: 110 RNNILATFWGEFVDQILPHLEGSLYQPVIVVMQLIKAHKFQG 151
Score = 28.9 bits (63), Expect(3) = 2e-06
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +1
Query: 160 LTDIIGRVVSIQSTQKAQVGGKSTRFLDITLEDLE 264
L D+IG VVS + G K + ++++ LED E
Sbjct: 75 LFDVIGEVVSYGEVESHNQGDKKSAYMNVELEDHE 109
Score = 23.9 bits (50), Expect(3) = 2e-06
Identities = 9/25 (36%), Positives = 18/25 (72%)
Frame = +3
Query: 585 VSNSFHITKLIVNGEEYEIKEFKNR 659
V N++H++KL +N + + +FK+R
Sbjct: 155 VRNTWHVSKLWINPDLPQAVDFKSR 179
>ref|XP_012828681.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit B-like
[Erythranthe guttata] gi|848857219|ref|XP_012828689.1|
PREDICTED: replication protein A 70 kDa DNA-binding
subunit B-like [Erythranthe guttata]
gi|848857221|ref|XP_012828696.1| PREDICTED: replication
protein A 70 kDa DNA-binding subunit B-like [Erythranthe
guttata]
Length = 304
Score = 38.5 bits (88), Expect(4) = 3e-06
Identities = 16/47 (34%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Frame = +2
Query: 341 NRMTCTLWEEYIDIILPYLEGNSRE-PIVVILQMCRAKVFKGNLNYS 478
N++ C LW++Y + + +L + + PI++ILQ+C K F G + S
Sbjct: 92 NKLKCALWDKYAEELSTHLINDKPDSPIIIILQLCMVKSFNGKNSIS 138
Score = 27.7 bits (60), Expect(4) = 3e-06
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +1
Query: 160 LTDIIGRVVSIQSTQKAQVGGKSTRFLDITLEDL 261
L D+IG V+ + ++ G+S + L++ L+DL
Sbjct: 56 LIDVIGHVIERDALRELNKNGRSHKLLEVGLQDL 89
Score = 27.7 bits (60), Expect(4) = 3e-06
Identities = 10/29 (34%), Positives = 20/29 (68%)
Frame = +3
Query: 585 VSNSFHITKLIVNGEEYEIKEFKNRYYIQ 671
+SN+FH +KL++N E +E++ + +Q
Sbjct: 137 ISNAFHSSKLLINENLEEHREYREKLMMQ 165
Score = 24.3 bits (51), Expect(4) = 3e-06
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +1
Query: 769 SCSISHVTVPSNVTVSDDLSSSE-ASIRTIEQSYSNRQVIVLQTVL 903
S SIS ++ +V +SDDL +E +I + S R V +L V+
Sbjct: 170 SQSISQISTHRSVGISDDLLQTEHMTISDLMDCTSERSVALLAKVV 215
>ref|XP_003606360.1| DUF223 domain protein [Medicago truncatula]
gi|355507415|gb|AES88557.1| DUF223 domain protein
[Medicago truncatula]
Length = 326
Score = 38.1 bits (87), Expect(3) = 7e-06
Identities = 14/42 (33%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
Frame = +2
Query: 341 NRMTCTLWEEYIDIILPYLEGNSRE-PIVVILQMCRAKVFKG 463
NR+ C+LW E++D I+ + + + P ++ILQ C+ +++ G
Sbjct: 173 NRLHCSLWGEHVDKIVTFFGNHDNDTPTILILQFCKTRMYLG 214
Score = 35.8 bits (81), Expect(3) = 7e-06
Identities = 16/47 (34%), Positives = 28/47 (59%)
Frame = +1
Query: 124 FNKFLCVNFFGILTDIIGRVVSIQSTQKAQVGGKSTRFLDITLEDLE 264
FN+ L + TD+IG V+ + ++ + + +R +D+TLEDLE
Sbjct: 125 FNEILSSTVEEVYTDVIGHVIERGNIRETEKDERKSRVIDLTLEDLE 171
Score = 24.3 bits (51), Expect(3) = 7e-06
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = +3
Query: 585 VSNSFHITKLIVNGEEYEIKEFKNR 659
V+N+F+ TKLI+NG+ ++ + R
Sbjct: 218 VANAFNGTKLILNGDLPDVAVYMTR 242
>ref|XP_013442703.1| plant OB fold protein, putative [Medicago truncatula]
gi|657370644|gb|KEH16728.1| plant OB fold protein,
putative [Medicago truncatula]
Length = 248
Score = 36.6 bits (83), Expect(3) = 1e-05
Identities = 13/40 (32%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Frame = +2
Query: 341 NRMTCTLWEEYIDIILPYLEGNSRE-PIVVILQMCRAKVF 457
NR+ C+LW E+ D I+ + + + + P ++ILQ C+ +++
Sbjct: 129 NRLHCSLWGEHADKIVSFFDNHDNDTPTILILQFCKTRMY 168
Score = 35.0 bits (79), Expect(3) = 1e-05
Identities = 16/47 (34%), Positives = 27/47 (57%)
Frame = +1
Query: 124 FNKFLCVNFFGILTDIIGRVVSIQSTQKAQVGGKSTRFLDITLEDLE 264
FN+ L + TD+I V+ ++ + G+ +R +D+TLEDLE
Sbjct: 81 FNEILSSTAEEVSTDVIDHVIERGDIRETEKDGRKSRVIDLTLEDLE 127
Score = 26.2 bits (56), Expect(3) = 1e-05
Identities = 10/22 (45%), Positives = 19/22 (86%)
Frame = +3
Query: 564 IHVDEVKVSNSFHITKLIVNGE 629
+++D + V+N+F+ TKLI+NG+
Sbjct: 167 MYLDAMGVANAFNGTKLILNGD 188