BLASTX nr result

ID: Rehmannia28_contig00005346 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00005346
         (1124 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009794117.1| PREDICTED: uncharacterized protein LOC104240...    73   4e-11
ref|XP_009787046.1| PREDICTED: replication protein A 70 kDa DNA-...    62   1e-07
ref|XP_009794119.1| PREDICTED: uncharacterized protein LOC104240...    62   2e-07
ref|XP_009761074.1| PREDICTED: replication protein A 70 kDa DNA-...    60   1e-06
ref|XP_015948282.1| PREDICTED: replication protein A 70 kDa DNA-...    60   2e-06
ref|XP_015944203.1| PREDICTED: uncharacterized protein LOC107469...    59   5e-06

>ref|XP_009794117.1| PREDICTED: uncharacterized protein LOC104240911 isoform X1
           [Nicotiana sylvestris]
          Length = 282

 Score = 73.2 bits (178), Expect = 4e-11
 Identities = 40/108 (37%), Positives = 63/108 (58%), Gaps = 2/108 (1%)
 Frame = -3

Query: 345 GSFWVCGTIISFIGD--WWYLSCPICPKKLSEAGDKLYCFGCDKFPETGHLRSVILTCKN 172
           G++WV  TI+    D  W YL+C  C KKL +AG+K YC  C++      ++SVI     
Sbjct: 47  GNYWVVATIVHVELDRGWCYLACKNCSKKLEKAGNKFYCKKCEQ------IQSVIHRYDY 100

Query: 171 NFVYFSVIFLITFFMCNIKYKLEIQVVDETGNVPLVLWDRDCEKLIGK 28
           N +YF   ++I       +Y+L+++V+D T  + L+LWD+D  K+I K
Sbjct: 101 N-LYFLYYYMILKIQTLSRYRLQVKVMDCTDTISLLLWDKDGTKIIEK 147


>ref|XP_009787046.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit C-like,
           partial [Nicotiana sylvestris]
          Length = 244

 Score = 62.4 bits (150), Expect = 1e-07
 Identities = 32/110 (29%), Positives = 49/110 (44%), Gaps = 2/110 (1%)
 Frame = -3

Query: 351 QIGSFWVCGTIISFI--GDWWYLSCPICPKKLSEAGDKLYCFGCDKFPETGHLRSVILTC 178
           Q G  W+  T+++ +   +W YL C  C KK+ + G K +C  CD+   +          
Sbjct: 17  QEGHIWIVATVVNLLLEKEWSYLGCKKCSKKVDKIGSKFHCKKCDRLDSS---------- 66

Query: 177 KNNFVYFSVIFLITFFMCNIKYKLEIQVVDETGNVPLVLWDRDCEKLIGK 28
                               +YK  +QV+D TG + L+LWDR+   LIGK
Sbjct: 67  -----------------VTHRYKFRVQVMDHTGFISLLLWDREATSLIGK 99


>ref|XP_009794119.1| PREDICTED: uncharacterized protein LOC104240911 isoform X2
           [Nicotiana sylvestris]
          Length = 278

 Score = 62.4 bits (150), Expect = 2e-07
 Identities = 34/108 (31%), Positives = 52/108 (48%), Gaps = 2/108 (1%)
 Frame = -3

Query: 345 GSFWVCGTIISFIGD--WWYLSCPICPKKLSEAGDKLYCFGCDKFPETGHLRSVILTCKN 172
           G++WV  TI+    D  W YL+C  C KKL +AG+K YC  C++     H          
Sbjct: 47  GNYWVVATIVHVELDRGWCYLACKNCSKKLEKAGNKFYCKKCEQIQSVIH---------- 96

Query: 171 NFVYFSVIFLITFFMCNIKYKLEIQVVDETGNVPLVLWDRDCEKLIGK 28
                             +Y+L+++V+D T  + L+LWD+D  K+I K
Sbjct: 97  ------------------RYRLQVKVMDCTDTISLLLWDKDGTKIIEK 126


>ref|XP_009761074.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit A-like
           [Nicotiana sylvestris]
          Length = 302

 Score = 60.1 bits (144), Expect = 1e-06
 Identities = 43/188 (22%), Positives = 73/188 (38%), Gaps = 2/188 (1%)
 Frame = -3

Query: 597 VNSSNPSCSISHVTAPSNVTVSDDLASSESSIRTIEQLYSNRHVIFL*TVLFILNI*IED 418
           VN +N S  IS + +  + +VSD LA+    ++TI +L +                    
Sbjct: 183 VNEAN-SARISQIPSQRSYSVSDKLATGTVEVKTIRELVN-------------------- 221

Query: 417 KLKWKYIGSL*KYFDA*LIFVLQIGSFWVCGTIISFI--GDWWYLSCPICPKKLSEAGDK 244
                                ++ G  W+  T+++ +   +W YL C  C KK+ + G+K
Sbjct: 222 --------------------CMEEGHIWIVATVVNLLLEKEWSYLGCKKCSKKVDKIGNK 261

Query: 243 LYCFGCDKFPETGHLRSVILTCKNNFVYFSVIFLITFFMCNIKYKLEIQVVDETGNVPLV 64
            +C  CD+   +   R                           YKL +QV+D TG + L+
Sbjct: 262 FHCKKCDRLDSSATHR---------------------------YKLRVQVMDHTGFISLL 294

Query: 63  LWDRDCEK 40
           LWDR+  +
Sbjct: 295 LWDREATR 302


>ref|XP_015948282.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit A-like
           [Arachis duranensis]
          Length = 537

 Score = 60.1 bits (144), Expect = 2e-06
 Identities = 38/118 (32%), Positives = 56/118 (47%), Gaps = 4/118 (3%)
 Frame = -3

Query: 345 GSFWVCGTIISFIG---DWWYLSCPICPKKL-SEAGDKLYCFGCDKFPETGHLRSVILTC 178
           G+ W+ GTI+S      DW+Y SC  CPKK+ +  G++  C  C      GH        
Sbjct: 292 GTVWIVGTIVSINAGKEDWFYKSCRKCPKKVETPIGNRYECTKC------GH-------- 337

Query: 177 KNNFVYFSVIFLITFFMCNIKYKLEIQVVDETGNVPLVLWDRDCEKLIGKPCAVLRRE 4
                        T     ++YK+EI V D TG++ L+LWDR+  +L GK    ++ E
Sbjct: 338 -------------THGCAALRYKVEIMVHDGTGSINLLLWDRETFQLCGKQAEKVKEE 382


>ref|XP_015944203.1| PREDICTED: uncharacterized protein LOC107469336 [Arachis
           duranensis]
          Length = 459

 Score = 58.9 bits (141), Expect = 5e-06
 Identities = 35/120 (29%), Positives = 57/120 (47%), Gaps = 4/120 (3%)
 Frame = -3

Query: 351 QIGSFWVCGTIISFIG---DWWYLSCPICPKKL-SEAGDKLYCFGCDKFPETGHLRSVIL 184
           Q G  W+ GTI+S      DW+Y SC  CPKK+ +  G++  C  C      GH      
Sbjct: 212 QEGPIWIAGTIVSINAGKDDWFYKSCRKCPKKVETPIGNRYECGKC------GH------ 259

Query: 183 TCKNNFVYFSVIFLITFFMCNIKYKLEIQVVDETGNVPLVLWDRDCEKLIGKPCAVLRRE 4
                          T    ++++K+E+ V D TG++ L++WDR+  +L G+    ++ E
Sbjct: 260 ---------------THASASVRFKVEVLVYDGTGSIMLLMWDRETAQLCGRQAEQIKDE 304


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