BLASTX nr result
ID: Rehmannia28_contig00005280
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia28_contig00005280
(304 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011078041.1| PREDICTED: pre-mRNA cleavage factor Im 25 kD... 84 6e-18
gb|KDP33872.1| hypothetical protein JCGZ_07443 [Jatropha curcas] 64 3e-10
ref|XP_012076986.1| PREDICTED: pre-mRNA cleavage factor Im 25 kD... 64 3e-10
ref|XP_012848230.1| PREDICTED: pre-mRNA cleavage factor Im 25 kD... 64 3e-10
emb|CDP03125.1| unnamed protein product [Coffea canephora] 60 6e-09
ref|XP_009587103.1| PREDICTED: cleavage and polyadenylation spec... 57 1e-08
gb|KJB07287.1| hypothetical protein B456_001G0137001, partial [G... 57 1e-08
ref|XP_007012736.1| CFIM-25 isoform 3 [Theobroma cacao] gi|50878... 58 2e-08
ref|XP_009785463.1| PREDICTED: cleavage and polyadenylation spec... 58 3e-08
ref|XP_007012734.1| CFIM-25 isoform 1 [Theobroma cacao] gi|50878... 58 3e-08
ref|XP_010656160.1| PREDICTED: pre-mRNA cleavage factor Im 25 kD... 58 4e-08
ref|XP_009785462.1| PREDICTED: cleavage and polyadenylation spec... 58 5e-08
ref|XP_010656159.1| PREDICTED: pre-mRNA cleavage factor Im 25 kD... 58 5e-08
ref|XP_002279095.1| PREDICTED: pre-mRNA cleavage factor Im 25 kD... 58 5e-08
emb|CBI27869.3| unnamed protein product [Vitis vinifera] 58 5e-08
ref|XP_007012735.1| CFIM-25 isoform 2, partial [Theobroma cacao]... 58 6e-08
ref|XP_010656158.1| PREDICTED: pre-mRNA cleavage factor Im 25 kD... 58 6e-08
ref|XP_012490642.1| PREDICTED: pre-mRNA cleavage factor Im 25 kD... 57 6e-08
ref|XP_002308275.2| hypothetical protein POPTR_0006s14840g [Popu... 58 6e-08
ref|XP_011003361.1| PREDICTED: pre-mRNA cleavage factor Im 25 kD... 55 2e-07
>ref|XP_011078041.1| PREDICTED: pre-mRNA cleavage factor Im 25 kDa subunit 1 [Sesamum
indicum]
Length = 221
Score = 84.0 bits (206), Expect = 6e-18
Identities = 40/57 (70%), Positives = 48/57 (84%), Gaps = 2/57 (3%)
Frame = +3
Query: 138 KMDDPSAVFENGNSHQSD--ESNVLDIYPLSCYYFGSRGSASFKNETISDRVLRMKA 302
+MDD +AV ENGNSH + +S+VLD+YPLSCYYFGSR S FKNET++DRVLRMKA
Sbjct: 4 QMDDANAVTENGNSHPTSLSDSSVLDVYPLSCYYFGSRESVPFKNETVADRVLRMKA 60
>gb|KDP33872.1| hypothetical protein JCGZ_07443 [Jatropha curcas]
Length = 208
Score = 63.5 bits (153), Expect = 3e-10
Identities = 28/48 (58%), Positives = 37/48 (77%)
Frame = +3
Query: 159 VFENGNSHQSDESNVLDIYPLSCYYFGSRGSASFKNETISDRVLRMKA 302
V +NG+ D+ +VLDIYPLS YYFG++ SFKNET++DRV RMK+
Sbjct: 2 VLDNGHEGSRDQGSVLDIYPLSSYYFGAKDPLSFKNETLADRVQRMKS 49
>ref|XP_012076986.1| PREDICTED: pre-mRNA cleavage factor Im 25 kDa subunit 1 [Jatropha
curcas]
Length = 212
Score = 63.5 bits (153), Expect = 3e-10
Identities = 28/48 (58%), Positives = 37/48 (77%)
Frame = +3
Query: 159 VFENGNSHQSDESNVLDIYPLSCYYFGSRGSASFKNETISDRVLRMKA 302
V +NG+ D+ +VLDIYPLS YYFG++ SFKNET++DRV RMK+
Sbjct: 6 VLDNGHEGSRDQGSVLDIYPLSSYYFGAKDPLSFKNETLADRVQRMKS 53
>ref|XP_012848230.1| PREDICTED: pre-mRNA cleavage factor Im 25 kDa subunit 1
[Erythranthe guttata] gi|604315799|gb|EYU28364.1|
hypothetical protein MIMGU_mgv1a013494mg [Erythranthe
guttata]
Length = 219
Score = 63.5 bits (153), Expect = 3e-10
Identities = 31/54 (57%), Positives = 40/54 (74%)
Frame = +3
Query: 141 MDDPSAVFENGNSHQSDESNVLDIYPLSCYYFGSRGSASFKNETISDRVLRMKA 302
M D + ENG+S + S+VLDIYPLSCYYFGS+ S S KNE+ +DR+LR+ A
Sbjct: 1 MGDSTGALENGDSDHTS-SDVLDIYPLSCYYFGSKESVSLKNESDADRLLRLTA 53
>emb|CDP03125.1| unnamed protein product [Coffea canephora]
Length = 218
Score = 60.1 bits (144), Expect = 6e-09
Identities = 28/45 (62%), Positives = 36/45 (80%)
Frame = +3
Query: 165 ENGNSHQSDESNVLDIYPLSCYYFGSRGSASFKNETISDRVLRMK 299
+NG+S Q+ N LDIYPL+CYYFGS+ + FK+ET SDR+LRMK
Sbjct: 13 QNGSSVQN-YGNALDIYPLNCYYFGSKEAVPFKDETTSDRILRMK 56
>ref|XP_009587103.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like [Nicotiana tomentosiformis]
Length = 79
Score = 56.6 bits (135), Expect = 1e-08
Identities = 28/49 (57%), Positives = 36/49 (73%), Gaps = 4/49 (8%)
Frame = +3
Query: 165 ENGNSHQS----DESNVLDIYPLSCYYFGSRGSASFKNETISDRVLRMK 299
ENG + S + SNVL+IYPL+ YYFGS+ + FK ET++DRVLRMK
Sbjct: 11 ENGGVYSSGGAVNSSNVLNIYPLNHYYFGSKEAVQFKEETLADRVLRMK 59
>gb|KJB07287.1| hypothetical protein B456_001G0137001, partial [Gossypium
raimondii]
Length = 98
Score = 57.0 bits (136), Expect = 1e-08
Identities = 26/44 (59%), Positives = 34/44 (77%), Gaps = 1/44 (2%)
Frame = +3
Query: 174 NSHQSDESNV-LDIYPLSCYYFGSRGSASFKNETISDRVLRMKA 302
NS +DE +DIYPLSCYYFGS+ + FK+ET+SDR+ RMK+
Sbjct: 8 NSSSTDEGRKEMDIYPLSCYYFGSKEAIVFKDETVSDRITRMKS 51
>ref|XP_007012736.1| CFIM-25 isoform 3 [Theobroma cacao] gi|508783099|gb|EOY30355.1|
CFIM-25 isoform 3 [Theobroma cacao]
Length = 182
Score = 58.2 bits (139), Expect = 2e-08
Identities = 26/50 (52%), Positives = 35/50 (70%)
Frame = +3
Query: 153 SAVFENGNSHQSDESNVLDIYPLSCYYFGSRGSASFKNETISDRVLRMKA 302
+A N +S D +DIYPLSCYYFGS+ + FK+ET+SDR+ RMK+
Sbjct: 9 AAATVNDHSSSGDHRKEVDIYPLSCYYFGSKETIVFKDETLSDRIKRMKS 58
>ref|XP_009785463.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5 isoform X2 [Nicotiana sylvestris]
Length = 182
Score = 57.8 bits (138), Expect = 3e-08
Identities = 30/53 (56%), Positives = 37/53 (69%), Gaps = 4/53 (7%)
Frame = +3
Query: 153 SAVFENGNSHQS----DESNVLDIYPLSCYYFGSRGSASFKNETISDRVLRMK 299
S ENG + S + SNVLDIYPL+ YYFGS+ + FK ET++DRVLRMK
Sbjct: 7 STAEENGGVYASGGAVNSSNVLDIYPLNHYYFGSKEALRFKEETLADRVLRMK 59
>ref|XP_007012734.1| CFIM-25 isoform 1 [Theobroma cacao] gi|508783097|gb|EOY30353.1|
CFIM-25 isoform 1 [Theobroma cacao]
Length = 219
Score = 58.2 bits (139), Expect = 3e-08
Identities = 26/50 (52%), Positives = 35/50 (70%)
Frame = +3
Query: 153 SAVFENGNSHQSDESNVLDIYPLSCYYFGSRGSASFKNETISDRVLRMKA 302
+A N +S D +DIYPLSCYYFGS+ + FK+ET+SDR+ RMK+
Sbjct: 9 AAATVNDHSSSGDHRKEVDIYPLSCYYFGSKETIVFKDETLSDRIKRMKS 58
>ref|XP_010656160.1| PREDICTED: pre-mRNA cleavage factor Im 25 kDa subunit 1 isoform X4
[Vitis vinifera]
Length = 247
Score = 58.2 bits (139), Expect = 4e-08
Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 2/82 (2%)
Frame = +3
Query: 63 FYIPPPNYTAPLLLIVFSKSF*ISAKMDDPSAVFENGNSHQSDESN--VLDIYPLSCYYF 236
++ P + L F ++ + +M+ +G+ S +S+ VLDIYPLSCYYF
Sbjct: 42 YFASPQRFFLSRLFSAFPQALSLIFRMNYEMGSSADGDRSSSGDSSNHVLDIYPLSCYYF 101
Query: 237 GSRGSASFKNETISDRVLRMKA 302
GS+ K ET++DR+LRMK+
Sbjct: 102 GSKDPLLLKEETLADRILRMKS 123
>ref|XP_009785462.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5 isoform X1 [Nicotiana sylvestris]
Length = 219
Score = 57.8 bits (138), Expect = 5e-08
Identities = 30/53 (56%), Positives = 37/53 (69%), Gaps = 4/53 (7%)
Frame = +3
Query: 153 SAVFENGNSHQS----DESNVLDIYPLSCYYFGSRGSASFKNETISDRVLRMK 299
S ENG + S + SNVLDIYPL+ YYFGS+ + FK ET++DRVLRMK
Sbjct: 7 STAEENGGVYASGGAVNSSNVLDIYPLNHYYFGSKEALRFKEETLADRVLRMK 59
>ref|XP_010656159.1| PREDICTED: pre-mRNA cleavage factor Im 25 kDa subunit 1 isoform X3
[Vitis vinifera]
Length = 265
Score = 58.2 bits (139), Expect = 5e-08
Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 2/82 (2%)
Frame = +3
Query: 63 FYIPPPNYTAPLLLIVFSKSF*ISAKMDDPSAVFENGNSHQSDESN--VLDIYPLSCYYF 236
++ P + L F ++ + +M+ +G+ S +S+ VLDIYPLSCYYF
Sbjct: 42 YFASPQRFFLSRLFSAFPQALSLIFRMNYEMGSSADGDRSSSGDSSNHVLDIYPLSCYYF 101
Query: 237 GSRGSASFKNETISDRVLRMKA 302
GS+ K ET++DR+LRMK+
Sbjct: 102 GSKDPLLLKEETLADRILRMKS 123
>ref|XP_002279095.1| PREDICTED: pre-mRNA cleavage factor Im 25 kDa subunit 1 isoform X2
[Vitis vinifera]
Length = 284
Score = 58.2 bits (139), Expect = 5e-08
Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 2/82 (2%)
Frame = +3
Query: 63 FYIPPPNYTAPLLLIVFSKSF*ISAKMDDPSAVFENGNSHQSDESN--VLDIYPLSCYYF 236
++ P + L F ++ + +M+ +G+ S +S+ VLDIYPLSCYYF
Sbjct: 42 YFASPQRFFLSRLFSAFPQALSLIFRMNYEMGSSADGDRSSSGDSSNHVLDIYPLSCYYF 101
Query: 237 GSRGSASFKNETISDRVLRMKA 302
GS+ K ET++DR+LRMK+
Sbjct: 102 GSKDPLLLKEETLADRILRMKS 123
>emb|CBI27869.3| unnamed protein product [Vitis vinifera]
Length = 291
Score = 58.2 bits (139), Expect = 5e-08
Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 2/82 (2%)
Frame = +3
Query: 63 FYIPPPNYTAPLLLIVFSKSF*ISAKMDDPSAVFENGNSHQSDESN--VLDIYPLSCYYF 236
++ P + L F ++ + +M+ +G+ S +S+ VLDIYPLSCYYF
Sbjct: 49 YFASPQRFFLSRLFSAFPQALSLIFRMNYEMGSSADGDRSSSGDSSNHVLDIYPLSCYYF 108
Query: 237 GSRGSASFKNETISDRVLRMKA 302
GS+ K ET++DR+LRMK+
Sbjct: 109 GSKDPLLLKEETLADRILRMKS 130
>ref|XP_007012735.1| CFIM-25 isoform 2, partial [Theobroma cacao]
gi|508783098|gb|EOY30354.1| CFIM-25 isoform 2, partial
[Theobroma cacao]
Length = 242
Score = 57.8 bits (138), Expect = 6e-08
Identities = 25/45 (55%), Positives = 33/45 (73%)
Frame = +3
Query: 168 NGNSHQSDESNVLDIYPLSCYYFGSRGSASFKNETISDRVLRMKA 302
N +S D +DIYPLSCYYFGS+ + FK+ET+SDR+ RMK+
Sbjct: 2 NDHSSSGDHRKEVDIYPLSCYYFGSKETIVFKDETLSDRIKRMKS 46
>ref|XP_010656158.1| PREDICTED: pre-mRNA cleavage factor Im 25 kDa subunit 1 isoform X1
[Vitis vinifera]
Length = 302
Score = 58.2 bits (139), Expect = 6e-08
Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 2/82 (2%)
Frame = +3
Query: 63 FYIPPPNYTAPLLLIVFSKSF*ISAKMDDPSAVFENGNSHQSDESN--VLDIYPLSCYYF 236
++ P + L F ++ + +M+ +G+ S +S+ VLDIYPLSCYYF
Sbjct: 42 YFASPQRFFLSRLFSAFPQALSLIFRMNYEMGSSADGDRSSSGDSSNHVLDIYPLSCYYF 101
Query: 237 GSRGSASFKNETISDRVLRMKA 302
GS+ K ET++DR+LRMK+
Sbjct: 102 GSKDPLLLKEETLADRILRMKS 123
>ref|XP_012490642.1| PREDICTED: pre-mRNA cleavage factor Im 25 kDa subunit 1-like
[Gossypium raimondii]
Length = 189
Score = 57.0 bits (136), Expect = 6e-08
Identities = 26/44 (59%), Positives = 34/44 (77%), Gaps = 1/44 (2%)
Frame = +3
Query: 174 NSHQSDESNV-LDIYPLSCYYFGSRGSASFKNETISDRVLRMKA 302
NS +DE +DIYPLSCYYFGS+ + FK+ET+SDR+ RMK+
Sbjct: 8 NSSSTDEGRKEMDIYPLSCYYFGSKEAIVFKDETVSDRITRMKS 51
>ref|XP_002308275.2| hypothetical protein POPTR_0006s14840g [Populus trichocarpa]
gi|550336365|gb|EEE91798.2| hypothetical protein
POPTR_0006s14840g [Populus trichocarpa]
Length = 258
Score = 57.8 bits (138), Expect = 6e-08
Identities = 28/55 (50%), Positives = 38/55 (69%)
Frame = +3
Query: 138 KMDDPSAVFENGNSHQSDESNVLDIYPLSCYYFGSRGSASFKNETISDRVLRMKA 302
KM D S + N+HQS V++IYPL YYFGS+ +F++ETI+DRV RMK+
Sbjct: 48 KMGDHSVTVTDNNNHQS---TVIEIYPLGSYYFGSKDPIAFRDETIADRVQRMKS 99
>ref|XP_011003361.1| PREDICTED: pre-mRNA cleavage factor Im 25 kDa subunit 1 isoform X2
[Populus euphratica]
Length = 173
Score = 55.5 bits (132), Expect = 2e-07
Identities = 26/54 (48%), Positives = 37/54 (68%)
Frame = +3
Query: 141 MDDPSAVFENGNSHQSDESNVLDIYPLSCYYFGSRGSASFKNETISDRVLRMKA 302
M D S + N+HQS V++IYPL YYFGS+ +F++ET++DRV RMK+
Sbjct: 1 MGDHSVTVTDNNNHQS---TVIEIYPLGSYYFGSKDPIAFRDETVADRVQRMKS 51