BLASTX nr result

ID: Rehmannia28_contig00005167 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00005167
         (317 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011086073.1| PREDICTED: probable ubiquitin-conjugating en...   140   1e-36
ref|XP_012830371.1| PREDICTED: probable ubiquitin-conjugating en...    77   3e-14
ref|XP_009605286.1| PREDICTED: probable ubiquitin-conjugating en...    55   1e-06

>ref|XP_011086073.1| PREDICTED: probable ubiquitin-conjugating enzyme E2 24 [Sesamum
           indicum]
          Length = 912

 Score =  140 bits (353), Expect = 1e-36
 Identities = 76/109 (69%), Positives = 91/109 (83%), Gaps = 4/109 (3%)
 Frame = -2

Query: 316 GQKLKDVFGLNYDNAKDSSSHSISQVAMGIFTSITSSLFGSL----ISGYKCTSKGGQID 149
           GQKLKD  GL+ DNAK+S+S+ ISQVA+G+F+SITSSLFGSL    ISGYK TS GGQI+
Sbjct: 518 GQKLKDTLGLDCDNAKESTSNFISQVAIGVFSSITSSLFGSLTTSLISGYKYTSDGGQIN 577

Query: 148 GKPPSEEALELCNLNHGGQLLVVEDLEMHEKKITSLQIKELDEDILLPS 2
           GKPP+EE+LELCNLN G Q  VV+DLEM E KIT LQIKE +E+I++PS
Sbjct: 578 GKPPAEESLELCNLNLGEQFPVVDDLEMPE-KITPLQIKEANENIMMPS 625


>ref|XP_012830371.1| PREDICTED: probable ubiquitin-conjugating enzyme E2 24 [Erythranthe
           guttata] gi|848858918|ref|XP_012830372.1| PREDICTED:
           probable ubiquitin-conjugating enzyme E2 24 [Erythranthe
           guttata] gi|604344637|gb|EYU43391.1| hypothetical
           protein MIMGU_mgv1a001292mg [Erythranthe guttata]
          Length = 846

 Score = 76.6 bits (187), Expect = 3e-14
 Identities = 56/115 (48%), Positives = 68/115 (59%), Gaps = 10/115 (8%)
 Frame = -2

Query: 316 GQKLKDVFGLNYDNAKDSSSHSISQVAMGIFTSITSSLFG----SLISGYKCTSKGGQID 149
           GQ LK++ GLN +NAK+SS   IS+VA+GIFTSITS++ G    SLI  YK TS+  +I 
Sbjct: 458 GQDLKEISGLNSNNAKESS---ISEVAIGIFTSITSNILGSLSTSLIGRYKFTSEIPKIH 514

Query: 148 GKPPSEE------ALELCNLNHGGQLLVVEDLEMHEKKITSLQIKELDEDILLPS 2
            K P EE      ALEL N N GG+    EDLE          IK  +EDI  PS
Sbjct: 515 SKSPDEEEEEEEAALELSNFNLGGEF---EDLE----------IKVANEDITFPS 556


>ref|XP_009605286.1| PREDICTED: probable ubiquitin-conjugating enzyme E2 24 [Nicotiana
           tomentosiformis] gi|697192399|ref|XP_009605287.1|
           PREDICTED: probable ubiquitin-conjugating enzyme E2 24
           [Nicotiana tomentosiformis]
           gi|697192401|ref|XP_009605288.1| PREDICTED: probable
           ubiquitin-conjugating enzyme E2 24 [Nicotiana
           tomentosiformis]
          Length = 923

 Score = 54.7 bits (130), Expect = 1e-06
 Identities = 34/76 (44%), Positives = 45/76 (59%), Gaps = 4/76 (5%)
 Frame = -2

Query: 268 DSSSHSISQVAMGIFTSITSSLFG----SLISGYKCTSKGGQIDGKPPSEEALELCNLNH 101
           DSSS  +SQ A+G F+SITSSLFG    SL   Y+  S+ G+    P  EE +EL NLN 
Sbjct: 546 DSSSCLLSQAAIGFFSSITSSLFGPLSSSLFGTYQAISEEGKQSRLPNEEEIIELSNLNA 605

Query: 100 GGQLLVVEDLEMHEKK 53
           G   L V D++   ++
Sbjct: 606 GIPTLGVGDVKASSER 621


Top