BLASTX nr result
ID: Rehmannia28_contig00005031
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia28_contig00005031
(3114 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011069583.1| PREDICTED: DNA-directed RNA polymerase 3, ch... 1627 0.0
ref|XP_012837864.1| PREDICTED: DNA-directed RNA polymerase 3B, c... 1595 0.0
gb|EYU37150.1| hypothetical protein MIMGU_mgv1a000925mg [Erythra... 1569 0.0
ref|XP_011069584.1| PREDICTED: DNA-directed RNA polymerase 3B, c... 1505 0.0
ref|XP_006343727.1| PREDICTED: DNA-directed RNA polymerase 3, ch... 1460 0.0
ref|NP_001289533.1| DNA-directed RNA polymerase 3, chloroplastic... 1458 0.0
ref|XP_004242994.1| PREDICTED: DNA-directed RNA polymerase 3, ch... 1456 0.0
ref|XP_015081184.1| PREDICTED: DNA-directed RNA polymerase 3, ch... 1456 0.0
sp|Q8L6J1.2|RPO3B_TOBAC RecName: Full=DNA-directed RNA polymeras... 1448 0.0
ref|XP_009608694.1| PREDICTED: DNA-directed RNA polymerase 3B, c... 1442 0.0
gb|EPS64933.1| hypothetical protein M569_09836 [Genlisea aurea] 1436 0.0
ref|XP_002274521.1| PREDICTED: DNA-directed RNA polymerase 3, ch... 1373 0.0
ref|XP_007203225.1| hypothetical protein PRUPE_ppa000868mg [Prun... 1358 0.0
ref|XP_008243031.1| PREDICTED: DNA-directed RNA polymerase 3, ch... 1357 0.0
ref|XP_011018068.1| PREDICTED: DNA-directed RNA polymerase 3, ch... 1352 0.0
ref|XP_002325119.1| DNA-directed RNA polymerase family protein [... 1352 0.0
ref|XP_012445978.1| PREDICTED: DNA-directed RNA polymerase 3, ch... 1352 0.0
gb|KJB53874.1| hypothetical protein B456_009G009300 [Gossypium r... 1350 0.0
ref|XP_009366215.1| PREDICTED: DNA-directed RNA polymerase 3, ch... 1347 0.0
ref|XP_007013877.1| DNA/RNA polymerases superfamily protein isof... 1344 0.0
>ref|XP_011069583.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic isoform X1
[Sesamum indicum]
Length = 952
Score = 1627 bits (4212), Expect = 0.0
Identities = 813/937 (86%), Positives = 848/937 (90%)
Frame = +1
Query: 1 SQMPQRSSSSFPQTLKXXXXXXXXXXXXXXXXXXXXXNFPENPEKLLNLQVMPNGFRSSL 180
SQ PQ SSS FPQTLK +FP PEKL LQVMPNGF+S+L
Sbjct: 10 SQSPQFSSSPFPQTLKLPSIHNPAPLLPPPISDCTDDSFPGKPEKLSTLQVMPNGFQSNL 69
Query: 181 TKESGDRVFIQDPPWISSLFMKSLLFRGRNRSGVKIEFKEMERRKYYLLRRRQIKAETEA 360
TKES R FIQDPPWISSL+MKSLLFR +NRS VKIEF+E ERRKYYLLRRRQIKAETEA
Sbjct: 70 TKESSGRGFIQDPPWISSLYMKSLLFRSKNRSEVKIEFQETERRKYYLLRRRQIKAETEA 129
Query: 361 WXXXXXXXXXXXXXXXXXKLAPNLPHVKKLMLGWFEPLREAIEKEQNVQRSKKNKAAFAP 540
W KLAPNLP+VKKL+LGWFEPLREAIEKEQN QRSKK KAAFAP
Sbjct: 130 WENMVEEYRELEREMCEKKLAPNLPYVKKLILGWFEPLREAIEKEQNSQRSKKQKAAFAP 189
Query: 541 YVDALPADKMAVIVMHKIMGLLMMGGKEDRCVRVVEAAVQIGVAIEHEVRIHSFLERTKK 720
++DALPADKMAVIVMHKIM LLMMGGKEDRCVRVVEAAVQIGVAIEHEVRIH+FLE+TKK
Sbjct: 190 FIDALPADKMAVIVMHKIMSLLMMGGKEDRCVRVVEAAVQIGVAIEHEVRIHNFLEKTKK 249
Query: 721 HQRMEVGAESQEDSIKEAAILRKRVKSLIKRNRVIEVQKLVRSEEFKSWGRDTQAKLGCC 900
+QR E AE++EDS KEAAILRKRVKSLI+RNRVIEVQKLVR+EE KSW RDTQAKLGCC
Sbjct: 250 YQRKETVAETEEDSKKEAAILRKRVKSLIRRNRVIEVQKLVRNEESKSWSRDTQAKLGCC 309
Query: 901 LIQLLTQSAYVQPPVNQSADSPPDVRPAFRHIFKIATRESGQSLVKKYGVIECDPLVLAG 1080
LI+LLTQSAYVQPPVNQSADSPPDVRPAFRH FKIA RESGQ++VKKYGVIECDPLVL G
Sbjct: 310 LIELLTQSAYVQPPVNQSADSPPDVRPAFRHFFKIAPRESGQNVVKKYGVIECDPLVLTG 369
Query: 1081 LDKTVKHMIIPYVPMLVPPKKWRGYDKGGYLFLPSYLMRTHGSRQQQDAVKAVPTKQMQK 1260
LDKTVKHMIIPYVPMLVPPKKW+GYDKGGYLFLPSYLMRTHGSR+QQ AVK VP KQMQK
Sbjct: 370 LDKTVKHMIIPYVPMLVPPKKWKGYDKGGYLFLPSYLMRTHGSRKQQKAVKTVPPKQMQK 429
Query: 1261 VYEALDTLGNTKWRVNKRILSVVESIWAAGGNLAGLVNREDVPIPELLSDDXXXXXXXXX 1440
VYEALDTLGNTKWRVNKRILSVVE IWAAGGN+AGLVNREDVPIPELLSDD
Sbjct: 430 VYEALDTLGNTKWRVNKRILSVVECIWAAGGNIAGLVNREDVPIPELLSDDAKEVKKWKW 489
Query: 1441 XXXXXXXINQERHSQRCDTELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSD 1620
INQERHSQRCDTELKL+VARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSD
Sbjct: 490 SVRKVKKINQERHSQRCDTELKLNVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSD 549
Query: 1621 LCRGILEFAEGRPLGKSGLRWLKIHLANLYGGGVEKLSYDGRISFVENYIAEIFDSADNS 1800
LCRGILEFAEGRPLGKSGLRWLKIHLANLYGGGVEKLSYDGR+SFVEN IAEIFDSADNS
Sbjct: 550 LCRGILEFAEGRPLGKSGLRWLKIHLANLYGGGVEKLSYDGRLSFVENNIAEIFDSADNS 609
Query: 1801 LNGNRWWLKAEDPFQCLAACINLSEALRSSSPHTVVSHLPIHQDGSCNGLQHYAALGRDS 1980
LNGNRWWLKAEDPFQCLAACINL+EAL+SSSPHTV+SHLPIHQDGSCNGLQHYAALGRDS
Sbjct: 610 LNGNRWWLKAEDPFQCLAACINLAEALKSSSPHTVISHLPIHQDGSCNGLQHYAALGRDS 669
Query: 1981 FEAAAVNLIAGDKPADVYSEIAERVHNIMKRDSEKDPATDPSALLAKLLIGQVDRKLVKQ 2160
FEAAAVNLIAGDKPADVYSEIAERVHNIMKRDSEKDPATDPSALLAKLLI QVDRKLVKQ
Sbjct: 670 FEAAAVNLIAGDKPADVYSEIAERVHNIMKRDSEKDPATDPSALLAKLLISQVDRKLVKQ 729
Query: 2161 TVMTSVYGVTYVGAREQIKRRLEEKGLITDDRLLFSAACYAAKVTLAALGELFQAARAIM 2340
TVMTSVYGVTYVGAREQIKRRLEEKGLITDDRLLFSAACYAAKVTLAALGELFQAARAIM
Sbjct: 730 TVMTSVYGVTYVGAREQIKRRLEEKGLITDDRLLFSAACYAAKVTLAALGELFQAARAIM 789
Query: 2341 GWLGDCAKIIASENQPVRWTTPLGLPVVQPYFKTQRHVIRTSLQVLALQREGDSVEVRKQ 2520
GWLGDCAKIIASENQPV WTTPLGLPVVQPYFKTQRHVIRTSLQVLALQREGDSVEVRKQ
Sbjct: 790 GWLGDCAKIIASENQPVCWTTPLGLPVVQPYFKTQRHVIRTSLQVLALQREGDSVEVRKQ 849
Query: 2521 RTAFPPNFVHSLDGSHMMMTAIACRDGGLRFAGVHDSFWTHACDVDRMNQILRQKFVDLY 2700
RTAFPPNFVHSLDGSHMMMTA+ACRD GLRFAGVHDSFWTHACDVDRMNQILR+KFVDLY
Sbjct: 850 RTAFPPNFVHSLDGSHMMMTAVACRDAGLRFAGVHDSFWTHACDVDRMNQILREKFVDLY 909
Query: 2701 NMPILESLLESFETSYPTLTFPPLPNRGDFDLNKVVQ 2811
+MPILE+LLESF+TSYP LTFPPLPNRGDFDL KV++
Sbjct: 910 SMPILENLLESFQTSYPMLTFPPLPNRGDFDLEKVIE 946
>ref|XP_012837864.1| PREDICTED: DNA-directed RNA polymerase 3B, chloroplastic [Erythranthe
guttata]
Length = 953
Score = 1595 bits (4129), Expect = 0.0
Identities = 792/938 (84%), Positives = 843/938 (89%), Gaps = 1/938 (0%)
Frame = +1
Query: 1 SQMPQRSSSSFPQTLKXXXXXXXXXXXXXXXXXXXXXNFPENPEKLLNLQVMPNGFRSSL 180
SQ PQ SSSSFPQ LK NF N +K+ LQV+PNGF S+
Sbjct: 10 SQSPQFSSSSFPQNLKLPSLHNPALLLPPPVSDSSDDNFRGNLDKVATLQVIPNGFPSNF 69
Query: 181 TKESGDRVFIQDPPWISSLFMKSLLFRGRNRSGVKIEFKEMERRKYYLLRRRQIKAETEA 360
TKES DRVFIQDPPWISSLFMK+LLFR RNR GVKIEF+EMERRKYYLLRRRQ+KAETEA
Sbjct: 70 TKESKDRVFIQDPPWISSLFMKNLLFRSRNRGGVKIEFQEMERRKYYLLRRRQVKAETEA 129
Query: 361 WXXXXXXXXXXXXXXXXXKLAPNLPHVKKLMLGWFEPLREAIEKEQNVQRSKKNKAAFAP 540
W KLAPNLP+VKKL+LGWFEPLREAIEKEQN QRSKKNKAAFAP
Sbjct: 130 WENKVEEYRELEREMCEKKLAPNLPYVKKLILGWFEPLREAIEKEQNTQRSKKNKAAFAP 189
Query: 541 YVDALPADKMAVIVMHKIMGLLMMGGKEDRCVRVVEAAVQIGVAIEHEVRIHSFLERTKK 720
++DALPADKMAVIVMHK+MGLLMMGGKEDRCVRVVEAAVQIGVA+E+EVRIHSFLE+ KK
Sbjct: 190 FIDALPADKMAVIVMHKMMGLLMMGGKEDRCVRVVEAAVQIGVAVENEVRIHSFLEKMKK 249
Query: 721 HQRMEVGAESQEDSIKEAAILRKRVKSLIKRNRVIEVQKLVRSEEFKSWGRDTQAKLGCC 900
+++ E+G ESQ DS EA I+RKRVKSLIKRNRVIEV KLVRSEEFKSWGRD QAKLGCC
Sbjct: 250 NEKREIGDESQVDSSNEAVIMRKRVKSLIKRNRVIEVHKLVRSEEFKSWGRDIQAKLGCC 309
Query: 901 LIQLLTQSAYVQPPVNQSADSPPDVRPAFRHIFKIATRESGQSLVKKYGVIECDPLVLAG 1080
LI+LLTQSAYVQPPVNQSADSPPDVRPAFRHIFKIATR GQ++VK+YGVIECDPLVLAG
Sbjct: 310 LIELLTQSAYVQPPVNQSADSPPDVRPAFRHIFKIATRLPGQTIVKRYGVIECDPLVLAG 369
Query: 1081 LDKTVKHMIIPYVPMLVPPKKWRGYDKGGYLFLPSYLMRTHGSRQQQDAVKAVPTKQMQK 1260
LDKTVKHMIIPYVPMLVPPKKW+GYD+GGYLFLPSYLMRTHGSR QQDAVK V +KQMQK
Sbjct: 370 LDKTVKHMIIPYVPMLVPPKKWKGYDRGGYLFLPSYLMRTHGSRHQQDAVKTVTSKQMQK 429
Query: 1261 VYEALDTLGNTKWRVNKRILSVVESIWAAGGNLAGLVNREDVPIPELL-SDDXXXXXXXX 1437
VYEALDTLGNTKWRVNKRIL+VVE+IWAAGGN+AGLVNRED+PIPELL S+D
Sbjct: 430 VYEALDTLGNTKWRVNKRILTVVENIWAAGGNIAGLVNREDIPIPELLLSEDMKEAKKWK 489
Query: 1438 XXXXXXXXINQERHSQRCDTELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSS 1617
INQERHSQRCDTELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSS
Sbjct: 490 WSVRKVKKINQERHSQRCDTELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSS 549
Query: 1618 DLCRGILEFAEGRPLGKSGLRWLKIHLANLYGGGVEKLSYDGRISFVENYIAEIFDSADN 1797
DLCRG+LEFAEGRPLGKSGLRWLKIH+ANLYGGGVEKLSYD R++FVEN I+EIFDSADN
Sbjct: 550 DLCRGVLEFAEGRPLGKSGLRWLKIHVANLYGGGVEKLSYDDRVAFVENNISEIFDSADN 609
Query: 1798 SLNGNRWWLKAEDPFQCLAACINLSEALRSSSPHTVVSHLPIHQDGSCNGLQHYAALGRD 1977
SLNGNRWWLKAEDPFQCLAACINL EAL+S SPHTV+SHLPIHQDGSCNGLQHYAALGRD
Sbjct: 610 SLNGNRWWLKAEDPFQCLAACINLVEALKSPSPHTVISHLPIHQDGSCNGLQHYAALGRD 669
Query: 1978 SFEAAAVNLIAGDKPADVYSEIAERVHNIMKRDSEKDPATDPSALLAKLLIGQVDRKLVK 2157
SFEAAAVNL+AGDKP+DVYSEIAERVHNIMKRDSEKDP TD AL+AK+LIGQVDRKLVK
Sbjct: 670 SFEAAAVNLVAGDKPSDVYSEIAERVHNIMKRDSEKDPETDRHALIAKVLIGQVDRKLVK 729
Query: 2158 QTVMTSVYGVTYVGAREQIKRRLEEKGLITDDRLLFSAACYAAKVTLAALGELFQAARAI 2337
QTVMTSVYGVTYVGAREQIKRRLEEKGLITDD+LLFSAACYAAKVTLAALGELFQAARAI
Sbjct: 730 QTVMTSVYGVTYVGAREQIKRRLEEKGLITDDKLLFSAACYAAKVTLAALGELFQAARAI 789
Query: 2338 MGWLGDCAKIIASENQPVRWTTPLGLPVVQPYFKTQRHVIRTSLQVLALQREGDSVEVRK 2517
M WLGDCAKIIASEN+PVRWTTPLGLPVVQPYFK+QRHVIRTSLQVLALQREGDSVEVRK
Sbjct: 790 MAWLGDCAKIIASENEPVRWTTPLGLPVVQPYFKSQRHVIRTSLQVLALQREGDSVEVRK 849
Query: 2518 QRTAFPPNFVHSLDGSHMMMTAIACRDGGLRFAGVHDSFWTHACDVDRMNQILRQKFVDL 2697
QRTAFPPNFVHSLDGSHMMMTAIACRD GLRFAGVHDSFWTHACDVDRMNQILRQKFVDL
Sbjct: 850 QRTAFPPNFVHSLDGSHMMMTAIACRDAGLRFAGVHDSFWTHACDVDRMNQILRQKFVDL 909
Query: 2698 YNMPILESLLESFETSYPTLTFPPLPNRGDFDLNKVVQ 2811
Y+MPILE+LLESFETSYPTL FPPLPNRGDF L +V++
Sbjct: 910 YSMPILENLLESFETSYPTLKFPPLPNRGDFLLEQVIE 947
>gb|EYU37150.1| hypothetical protein MIMGU_mgv1a000925mg [Erythranthe guttata]
Length = 941
Score = 1569 bits (4063), Expect = 0.0
Identities = 784/938 (83%), Positives = 833/938 (88%), Gaps = 1/938 (0%)
Frame = +1
Query: 1 SQMPQRSSSSFPQTLKXXXXXXXXXXXXXXXXXXXXXNFPENPEKLLNLQVMPNGFRSSL 180
SQ PQ SSSSFPQ LK NF N +K+ LQ
Sbjct: 10 SQSPQFSSSSFPQNLKLPSLHNPALLLPPPVSDSSDDNFRGNLDKVATLQ---------- 59
Query: 181 TKESGDRVFIQDPPWISSLFMKSLLFRGRNRSGVKIEFKEMERRKYYLLRRRQIKAETEA 360
ES DRVFIQDPPWISSLFMK+LLFR RNR GVKIEF+EMERRKYYLLRRRQ+KAETEA
Sbjct: 60 --ESKDRVFIQDPPWISSLFMKNLLFRSRNRGGVKIEFQEMERRKYYLLRRRQVKAETEA 117
Query: 361 WXXXXXXXXXXXXXXXXXKLAPNLPHVKKLMLGWFEPLREAIEKEQNVQRSKKNKAAFAP 540
W KLAPNLP+VKKL+LGWFEPLREAIEKEQN QRSKKNKAAFAP
Sbjct: 118 WENKVEEYRELEREMCEKKLAPNLPYVKKLILGWFEPLREAIEKEQNTQRSKKNKAAFAP 177
Query: 541 YVDALPADKMAVIVMHKIMGLLMMGGKEDRCVRVVEAAVQIGVAIEHEVRIHSFLERTKK 720
++DALPADKMAVIVMHK+MGLLMMGGKEDRCVRVVEAAVQIGVA+E+EVRIHSFLE+ KK
Sbjct: 178 FIDALPADKMAVIVMHKMMGLLMMGGKEDRCVRVVEAAVQIGVAVENEVRIHSFLEKMKK 237
Query: 721 HQRMEVGAESQEDSIKEAAILRKRVKSLIKRNRVIEVQKLVRSEEFKSWGRDTQAKLGCC 900
+++ E+G ESQ DS EA I+RKRVKSLIKRNRVIEV KLVRSEEFKSWGRD QAKLGCC
Sbjct: 238 NEKREIGDESQVDSSNEAVIMRKRVKSLIKRNRVIEVHKLVRSEEFKSWGRDIQAKLGCC 297
Query: 901 LIQLLTQSAYVQPPVNQSADSPPDVRPAFRHIFKIATRESGQSLVKKYGVIECDPLVLAG 1080
LI+LLTQSAYVQPPVNQSADSPPDVRPAFRHIFKIATR GQ++VK+YGVIECDPLVLAG
Sbjct: 298 LIELLTQSAYVQPPVNQSADSPPDVRPAFRHIFKIATRLPGQTIVKRYGVIECDPLVLAG 357
Query: 1081 LDKTVKHMIIPYVPMLVPPKKWRGYDKGGYLFLPSYLMRTHGSRQQQDAVKAVPTKQMQK 1260
LDKTVKHMIIPYVPMLVPPKKW+GYD+GGYLFLPSYLMRTHGSR QQDAVK V +KQMQK
Sbjct: 358 LDKTVKHMIIPYVPMLVPPKKWKGYDRGGYLFLPSYLMRTHGSRHQQDAVKTVTSKQMQK 417
Query: 1261 VYEALDTLGNTKWRVNKRILSVVESIWAAGGNLAGLVNREDVPIPELL-SDDXXXXXXXX 1437
VYEALDTLGNTKWRVNKRIL+VVE+IWAAGGN+AGLVNRED+PIPELL S+D
Sbjct: 418 VYEALDTLGNTKWRVNKRILTVVENIWAAGGNIAGLVNREDIPIPELLLSEDMKEAKKWK 477
Query: 1438 XXXXXXXXINQERHSQRCDTELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSS 1617
INQERHSQRCDTELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSS
Sbjct: 478 WSVRKVKKINQERHSQRCDTELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSS 537
Query: 1618 DLCRGILEFAEGRPLGKSGLRWLKIHLANLYGGGVEKLSYDGRISFVENYIAEIFDSADN 1797
DLCRG+LEFAEGRPLGKSGLRWLKIH+ANLYGGGVEKLSYD R++FVEN I+EIFDSADN
Sbjct: 538 DLCRGVLEFAEGRPLGKSGLRWLKIHVANLYGGGVEKLSYDDRVAFVENNISEIFDSADN 597
Query: 1798 SLNGNRWWLKAEDPFQCLAACINLSEALRSSSPHTVVSHLPIHQDGSCNGLQHYAALGRD 1977
SLNGNRWWLKAEDPFQCLAACINL EAL+S SPHTV+SHLPIHQDGSCNGLQHYAALGRD
Sbjct: 598 SLNGNRWWLKAEDPFQCLAACINLVEALKSPSPHTVISHLPIHQDGSCNGLQHYAALGRD 657
Query: 1978 SFEAAAVNLIAGDKPADVYSEIAERVHNIMKRDSEKDPATDPSALLAKLLIGQVDRKLVK 2157
SFEAAAVNL+AGDKP+DVYSEIAERVHNIMKRDSEKDP TD AL+AK+LIGQVDRKLVK
Sbjct: 658 SFEAAAVNLVAGDKPSDVYSEIAERVHNIMKRDSEKDPETDRHALIAKVLIGQVDRKLVK 717
Query: 2158 QTVMTSVYGVTYVGAREQIKRRLEEKGLITDDRLLFSAACYAAKVTLAALGELFQAARAI 2337
QTVMTSVYGVTYVGAREQIKRRLEEKGLITDD+LLFSAACYAAKVTLAALGELFQAARAI
Sbjct: 718 QTVMTSVYGVTYVGAREQIKRRLEEKGLITDDKLLFSAACYAAKVTLAALGELFQAARAI 777
Query: 2338 MGWLGDCAKIIASENQPVRWTTPLGLPVVQPYFKTQRHVIRTSLQVLALQREGDSVEVRK 2517
M WLGDCAKIIASEN+PVRWTTPLGLPVVQPYFK+QRHVIRTSLQVLALQREGDSVEVRK
Sbjct: 778 MAWLGDCAKIIASENEPVRWTTPLGLPVVQPYFKSQRHVIRTSLQVLALQREGDSVEVRK 837
Query: 2518 QRTAFPPNFVHSLDGSHMMMTAIACRDGGLRFAGVHDSFWTHACDVDRMNQILRQKFVDL 2697
QRTAFPPNFVHSLDGSHMMMTAIACRD GLRFAGVHDSFWTHACDVDRMNQILRQKFVDL
Sbjct: 838 QRTAFPPNFVHSLDGSHMMMTAIACRDAGLRFAGVHDSFWTHACDVDRMNQILRQKFVDL 897
Query: 2698 YNMPILESLLESFETSYPTLTFPPLPNRGDFDLNKVVQ 2811
Y+MPILE+LLESFETSYPTL FPPLPNRGDF L +V++
Sbjct: 898 YSMPILENLLESFETSYPTLKFPPLPNRGDFLLEQVIE 935
>ref|XP_011069584.1| PREDICTED: DNA-directed RNA polymerase 3B, chloroplastic isoform X2
[Sesamum indicum]
Length = 884
Score = 1505 bits (3897), Expect = 0.0
Identities = 757/874 (86%), Positives = 787/874 (90%)
Frame = +1
Query: 1 SQMPQRSSSSFPQTLKXXXXXXXXXXXXXXXXXXXXXNFPENPEKLLNLQVMPNGFRSSL 180
SQ PQ SSS FPQTLK +FP PEKL LQVMPNGF+S+L
Sbjct: 10 SQSPQFSSSPFPQTLKLPSIHNPAPLLPPPISDCTDDSFPGKPEKLSTLQVMPNGFQSNL 69
Query: 181 TKESGDRVFIQDPPWISSLFMKSLLFRGRNRSGVKIEFKEMERRKYYLLRRRQIKAETEA 360
TKES R FIQDPPWISSL+MKSLLFR +NRS VKIEF+E ERRKYYLLRRRQIKAETEA
Sbjct: 70 TKESSGRGFIQDPPWISSLYMKSLLFRSKNRSEVKIEFQETERRKYYLLRRRQIKAETEA 129
Query: 361 WXXXXXXXXXXXXXXXXXKLAPNLPHVKKLMLGWFEPLREAIEKEQNVQRSKKNKAAFAP 540
W KLAPNLP+VKKL+LGWFEPLREAIEKEQN QRSKK KAAFAP
Sbjct: 130 WENMVEEYRELEREMCEKKLAPNLPYVKKLILGWFEPLREAIEKEQNSQRSKKQKAAFAP 189
Query: 541 YVDALPADKMAVIVMHKIMGLLMMGGKEDRCVRVVEAAVQIGVAIEHEVRIHSFLERTKK 720
++DALPADKMAVIVMHKIM LLMMGGKEDRCVRVVEAAVQIGVAIEHEVRIH+FLE+TKK
Sbjct: 190 FIDALPADKMAVIVMHKIMSLLMMGGKEDRCVRVVEAAVQIGVAIEHEVRIHNFLEKTKK 249
Query: 721 HQRMEVGAESQEDSIKEAAILRKRVKSLIKRNRVIEVQKLVRSEEFKSWGRDTQAKLGCC 900
+QR E AE++EDS KEAAILRKRVKSLI+RNRVIEVQKLVR+EE KSW RDTQAKLGCC
Sbjct: 250 YQRKETVAETEEDSKKEAAILRKRVKSLIRRNRVIEVQKLVRNEESKSWSRDTQAKLGCC 309
Query: 901 LIQLLTQSAYVQPPVNQSADSPPDVRPAFRHIFKIATRESGQSLVKKYGVIECDPLVLAG 1080
LI+LLTQSAYVQPPVNQSADSPPDVRPAFRH FKIA RESGQ++VKKYGVIECDPLVL G
Sbjct: 310 LIELLTQSAYVQPPVNQSADSPPDVRPAFRHFFKIAPRESGQNVVKKYGVIECDPLVLTG 369
Query: 1081 LDKTVKHMIIPYVPMLVPPKKWRGYDKGGYLFLPSYLMRTHGSRQQQDAVKAVPTKQMQK 1260
LDKTVKHMIIPYVPMLVPPKKW+GYDKGGYLFLPSYLMRTHGSR+QQ AVK VP KQMQK
Sbjct: 370 LDKTVKHMIIPYVPMLVPPKKWKGYDKGGYLFLPSYLMRTHGSRKQQKAVKTVPPKQMQK 429
Query: 1261 VYEALDTLGNTKWRVNKRILSVVESIWAAGGNLAGLVNREDVPIPELLSDDXXXXXXXXX 1440
VYEALDTLGNTKWRVNKRILSVVE IWAAGGN+AGLVNREDVPIPELLSDD
Sbjct: 430 VYEALDTLGNTKWRVNKRILSVVECIWAAGGNIAGLVNREDVPIPELLSDDAKEVKKWKW 489
Query: 1441 XXXXXXXINQERHSQRCDTELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSD 1620
INQERHSQRCDTELKL+VARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSD
Sbjct: 490 SVRKVKKINQERHSQRCDTELKLNVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSD 549
Query: 1621 LCRGILEFAEGRPLGKSGLRWLKIHLANLYGGGVEKLSYDGRISFVENYIAEIFDSADNS 1800
LCRGILEFAEGRPLGKSGLRWLKIHLANLYGGGVEKLSYDGR+SFVEN IAEIFDSADNS
Sbjct: 550 LCRGILEFAEGRPLGKSGLRWLKIHLANLYGGGVEKLSYDGRLSFVENNIAEIFDSADNS 609
Query: 1801 LNGNRWWLKAEDPFQCLAACINLSEALRSSSPHTVVSHLPIHQDGSCNGLQHYAALGRDS 1980
LNGNRWWLKAEDPFQCLAACINL+EAL+SSSPHTV+SHLPIHQDGSCNGLQHYAALGRDS
Sbjct: 610 LNGNRWWLKAEDPFQCLAACINLAEALKSSSPHTVISHLPIHQDGSCNGLQHYAALGRDS 669
Query: 1981 FEAAAVNLIAGDKPADVYSEIAERVHNIMKRDSEKDPATDPSALLAKLLIGQVDRKLVKQ 2160
FEAAAVNLIAGDKPADVYSEIAERVHNIMKRDSEKDPATDPSALLAKLLI QVDRKLVKQ
Sbjct: 670 FEAAAVNLIAGDKPADVYSEIAERVHNIMKRDSEKDPATDPSALLAKLLISQVDRKLVKQ 729
Query: 2161 TVMTSVYGVTYVGAREQIKRRLEEKGLITDDRLLFSAACYAAKVTLAALGELFQAARAIM 2340
TVMTSVYGVTYVGAREQIKRRLEEKGLITDDRLLFSAACYAAKVTLAALGELFQAARAIM
Sbjct: 730 TVMTSVYGVTYVGAREQIKRRLEEKGLITDDRLLFSAACYAAKVTLAALGELFQAARAIM 789
Query: 2341 GWLGDCAKIIASENQPVRWTTPLGLPVVQPYFKTQRHVIRTSLQVLALQREGDSVEVRKQ 2520
GWLGDCAKIIASENQPV WTTPLGLPVVQPYFKTQRHVIRTSLQVLALQREGDSVEVRKQ
Sbjct: 790 GWLGDCAKIIASENQPVCWTTPLGLPVVQPYFKTQRHVIRTSLQVLALQREGDSVEVRKQ 849
Query: 2521 RTAFPPNFVHSLDGSHMMMTAIACRDGGLRFAGV 2622
RTAFPPNFVHSLDGSHMMMTA+ACRD GLRFAG+
Sbjct: 850 RTAFPPNFVHSLDGSHMMMTAVACRDAGLRFAGL 883
>ref|XP_006343727.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic [Solanum
tuberosum]
Length = 1015
Score = 1460 bits (3780), Expect = 0.0
Identities = 712/931 (76%), Positives = 810/931 (87%), Gaps = 1/931 (0%)
Frame = +1
Query: 22 SSSFPQTLKXXXXXXXXXXXXXXXXXXXXXNFPENPEKLLNLQVMPNGFRSSLTKESGDR 201
+SSFP+TLK N EN E+L+NLQ +PNG+ L KES R
Sbjct: 79 TSSFPKTLKLPVIQLPITVHSEVVCVSTDENLTENLEELVNLQKIPNGYPLVLQKESNKR 138
Query: 202 VFIQDPPWISSLFMKSLLFRGRNRSGVKIEFKEMERRKYY-LLRRRQIKAETEAWXXXXX 378
VFIQDPPW+SSLFM SL R + GV+ EF+E+ERR+ Y +LRRRQIKAETEAW
Sbjct: 139 VFIQDPPWVSSLFMNSLFVRAKQVKGVRREFREIERRRRYAMLRRRQIKAETEAWEQMVE 198
Query: 379 XXXXXXXXXXXXKLAPNLPHVKKLMLGWFEPLREAIEKEQNVQRSKKNKAAFAPYVDALP 558
KLAPNLP+VKKL+LGWFEPLR+AIEKEQN + ++K++ A+AP++D+LP
Sbjct: 199 EYRELEREMCEKKLAPNLPYVKKLLLGWFEPLRQAIEKEQNAEMTQKHRTAYAPHIDSLP 258
Query: 559 ADKMAVIVMHKIMGLLMMGGKEDRCVRVVEAAVQIGVAIEHEVRIHSFLERTKKHQRMEV 738
ADKMAVIVMHK+MGLLMMGGKE+RCV+VV+AAVQIG+A+E+EVRIH+F+E+TKKHQ+
Sbjct: 259 ADKMAVIVMHKLMGLLMMGGKEERCVQVVQAAVQIGMAVENEVRIHNFMEKTKKHQKHMS 318
Query: 739 GAESQEDSIKEAAILRKRVKSLIKRNRVIEVQKLVRSEEFKSWGRDTQAKLGCCLIQLLT 918
GA+ QED +E ILRKRVKSLIKRNRV+EV+KL++SEE +SWGRDTQAKLGC L++LLT
Sbjct: 319 GAQGQEDMSRETMILRKRVKSLIKRNRVVEVRKLMQSEEPESWGRDTQAKLGCRLLELLT 378
Query: 919 QSAYVQPPVNQSADSPPDVRPAFRHIFKIATRESGQSLVKKYGVIECDPLVLAGLDKTVK 1098
++AYVQPPV+QSAD+PPD+RPAFRH+F+IATR+ G+++VKKYGVIECDPLV+ G+D+TVK
Sbjct: 379 ETAYVQPPVDQSADTPPDIRPAFRHVFRIATRDPGKNIVKKYGVIECDPLVVVGVDRTVK 438
Query: 1099 HMIIPYVPMLVPPKKWRGYDKGGYLFLPSYLMRTHGSRQQQDAVKAVPTKQMQKVYEALD 1278
M+IPYVPMLVPPKKWRGYDKGGYLFLPSYLMRTHGSR+QQDAV++VP KQMQ+VYEALD
Sbjct: 439 QMMIPYVPMLVPPKKWRGYDKGGYLFLPSYLMRTHGSRRQQDAVRSVPAKQMQQVYEALD 498
Query: 1279 TLGNTKWRVNKRILSVVESIWAAGGNLAGLVNREDVPIPELLSDDXXXXXXXXXXXXXXX 1458
TLG+TKWRVNKRILSVVESIWA GGN+AGLV+R+DVPIPEL SDD
Sbjct: 499 TLGSTKWRVNKRILSVVESIWAGGGNIAGLVDRKDVPIPELHSDDIMELKRWKWRVRKAK 558
Query: 1459 XINQERHSQRCDTELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGIL 1638
INQE HSQRCDTELKLSVARK+KDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGIL
Sbjct: 559 KINQELHSQRCDTELKLSVARKLKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGIL 618
Query: 1639 EFAEGRPLGKSGLRWLKIHLANLYGGGVEKLSYDGRISFVENYIAEIFDSADNSLNGNRW 1818
EFAEGRPLGKSGLRWLK+HLA+LY GG+EKL YD RI+FVEN+I +I DSA N LNGNRW
Sbjct: 619 EFAEGRPLGKSGLRWLKVHLASLYAGGIEKLCYDARIAFVENHIDDILDSAHNPLNGNRW 678
Query: 1819 WLKAEDPFQCLAACINLSEALRSSSPHTVVSHLPIHQDGSCNGLQHYAALGRDSFEAAAV 1998
WL AEDP QCLAACINLSEAL+S SPHTV+SHLPIHQDGSCNGLQHYAALGRDS EAAAV
Sbjct: 679 WLNAEDPLQCLAACINLSEALKSPSPHTVISHLPIHQDGSCNGLQHYAALGRDSMEAAAV 738
Query: 1999 NLIAGDKPADVYSEIAERVHNIMKRDSEKDPATDPSALLAKLLIGQVDRKLVKQTVMTSV 2178
NL+AG+KPADVY+EIA RV +I++ DS KDPATDP+ALLAKLLI QVDRKLVKQTVMTSV
Sbjct: 739 NLVAGEKPADVYTEIALRVDHIIRGDSTKDPATDPNALLAKLLIDQVDRKLVKQTVMTSV 798
Query: 2179 YGVTYVGAREQIKRRLEEKGLITDDRLLFSAACYAAKVTLAALGELFQAARAIMGWLGDC 2358
YGVTYVGAREQIKRRLEEKGLI DDRLLF+A+CYAAKVTLAALGELFQAAR M WLGDC
Sbjct: 799 YGVTYVGAREQIKRRLEEKGLIDDDRLLFTASCYAAKVTLAALGELFQAARGTMTWLGDC 858
Query: 2359 AKIIASENQPVRWTTPLGLPVVQPYFKTQRHVIRTSLQVLALQREGDSVEVRKQRTAFPP 2538
AK+IASENQPVRWTTPLGLPVVQPYFKTQRHVIRTSLQVLALQREGD+VEVRKQRTAFPP
Sbjct: 859 AKVIASENQPVRWTTPLGLPVVQPYFKTQRHVIRTSLQVLALQREGDAVEVRKQRTAFPP 918
Query: 2539 NFVHSLDGSHMMMTAIACRDGGLRFAGVHDSFWTHACDVDRMNQILRQKFVDLYNMPILE 2718
NFVHSLDGSHMMMTA+ACRD GL FAGVHDSFWTHACDVD+MN+ILR+KFV+LY+MPILE
Sbjct: 919 NFVHSLDGSHMMMTAVACRDAGLHFAGVHDSFWTHACDVDQMNRILREKFVELYSMPILE 978
Query: 2719 SLLESFETSYPTLTFPPLPNRGDFDLNKVVQ 2811
LLESF+ SYP LTFPPLP RGDFDL +V++
Sbjct: 979 DLLESFQESYPALTFPPLPKRGDFDLQEVLE 1009
>ref|NP_001289533.1| DNA-directed RNA polymerase 3, chloroplastic [Nicotiana sylvestris]
gi|59800202|sp|P69242.1|RPOT3_NICSY RecName:
Full=DNA-directed RNA polymerase 3, chloroplastic;
AltName: Full=NsRpoT-C; AltName: Full=T7
bacteriophage-type single subunit RNA polymerase 3;
Flags: Precursor gi|59800203|sp|P69243.1|RPO3A_TOBAC
RecName: Full=DNA-directed RNA polymerase 3A,
chloroplastic; AltName: Full=NictaRpoT3-syl; AltName:
Full=T7 bacteriophage-type single subunit RNA polymerase
3A; Flags: Precursor [Nicotiana tabacum]
gi|21425641|emb|CAC82576.3| phage-type RNA polymerase
[Nicotiana sylvestris] gi|21425679|emb|CAC95027.2|
plastid RNA polymerase [Nicotiana tabacum]
gi|24475541|dbj|BAC22693.1| T7 bacteriophage-type single
subunit RNA polymerase [Nicotiana sylvestris]
gi|24475543|dbj|BAC22694.1| T7 bacteriophage-type single
subunit RNA polymerase [Nicotiana sylvestris]
Length = 977
Score = 1458 bits (3775), Expect = 0.0
Identities = 722/938 (76%), Positives = 815/938 (86%), Gaps = 1/938 (0%)
Frame = +1
Query: 1 SQMPQRSSSSFPQTLKXXXXXXXXXXXXXXXXXXXXXNFPENPEKLLNLQVMPNGFRSSL 180
SQ +SSFP+TLK EN E+L+NLQ + NG L
Sbjct: 38 SQSSSLPTSSFPKTLKLPVIQMPINNNIQSQTTVCVST-DENLEELVNLQKIANGV---L 93
Query: 181 TKESGDRVFIQDPPWISSLFMKSLLFRGRNRSGVKIEFKEMERRKYY-LLRRRQIKAETE 357
TKES RVFIQDPPW+SSLFM SL R + GV+ EF+E+ERR+ Y +LRRRQIKAETE
Sbjct: 94 TKESNKRVFIQDPPWVSSLFMNSLFVRAKQVQGVRREFREIERRRRYAMLRRRQIKAETE 153
Query: 358 AWXXXXXXXXXXXXXXXXXKLAPNLPHVKKLMLGWFEPLREAIEKEQNVQRSKKNKAAFA 537
AW KLAPNLP+VKKL+LGWFEPLR+AIEKEQN + + K++AAFA
Sbjct: 154 AWEQMVEEYRELEREMCEKKLAPNLPYVKKLLLGWFEPLRQAIEKEQNAETTVKHRAAFA 213
Query: 538 PYVDALPADKMAVIVMHKIMGLLMMGGKEDRCVRVVEAAVQIGVAIEHEVRIHSFLERTK 717
P++D+LPADKMAVIVMHK+MGLLMMGGKE+RCV+VV+AAVQIG+A+E+EVRIH+FLE+TK
Sbjct: 214 PHIDSLPADKMAVIVMHKLMGLLMMGGKEERCVQVVQAAVQIGMAVENEVRIHNFLEKTK 273
Query: 718 KHQRMEVGAESQEDSIKEAAILRKRVKSLIKRNRVIEVQKLVRSEEFKSWGRDTQAKLGC 897
K Q+ GA+SQED +E ILRKRVKSLIKRNRV+EV+KL++SEE +SWGRDTQAKLGC
Sbjct: 274 KLQKHMTGAQSQEDMSRETMILRKRVKSLIKRNRVVEVRKLMKSEEPESWGRDTQAKLGC 333
Query: 898 CLIQLLTQSAYVQPPVNQSADSPPDVRPAFRHIFKIATRESGQSLVKKYGVIECDPLVLA 1077
L++LLT++AYVQPPV+QSAD+PPD+RPAFRH+F+IATR+ G+S+VKKYGVIECDPLV+A
Sbjct: 334 RLLELLTETAYVQPPVDQSADTPPDIRPAFRHVFRIATRDPGKSIVKKYGVIECDPLVVA 393
Query: 1078 GLDKTVKHMIIPYVPMLVPPKKWRGYDKGGYLFLPSYLMRTHGSRQQQDAVKAVPTKQMQ 1257
G+D+TVK M+IPYVPMLVPPKKWRGYDKGGYLFLPSYLMRTHGSR+QQDAV++VPTKQMQ
Sbjct: 394 GVDRTVKQMMIPYVPMLVPPKKWRGYDKGGYLFLPSYLMRTHGSRRQQDAVRSVPTKQMQ 453
Query: 1258 KVYEALDTLGNTKWRVNKRILSVVESIWAAGGNLAGLVNREDVPIPELLSDDXXXXXXXX 1437
+VYEALDTLG+TKWRVNKRILSVVESIWA GGN+AGLV+R+DVPIPEL SDD
Sbjct: 454 QVYEALDTLGSTKWRVNKRILSVVESIWAGGGNIAGLVDRKDVPIPELHSDDIMEVKKWK 513
Query: 1438 XXXXXXXXINQERHSQRCDTELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSS 1617
INQE HSQRCDTELKLSVARK+KDEEGFYYPHNLDFRGRAYPMHPHLNHLSS
Sbjct: 514 WRVRKSKKINQELHSQRCDTELKLSVARKLKDEEGFYYPHNLDFRGRAYPMHPHLNHLSS 573
Query: 1618 DLCRGILEFAEGRPLGKSGLRWLKIHLANLYGGGVEKLSYDGRISFVENYIAEIFDSADN 1797
DLCRGILEFAEGRPLGKSGLRWLKIHLA+LY GG+EKL YD R++FVEN+I +I DSA+N
Sbjct: 574 DLCRGILEFAEGRPLGKSGLRWLKIHLASLYAGGIEKLCYDARLAFVENHIDDILDSANN 633
Query: 1798 SLNGNRWWLKAEDPFQCLAACINLSEALRSSSPHTVVSHLPIHQDGSCNGLQHYAALGRD 1977
LNGNRWWL AEDPFQCLAACINLSEAL+SSSPHTV SHLPIHQDGSCNGLQHYAALGRD
Sbjct: 634 PLNGNRWWLNAEDPFQCLAACINLSEALKSSSPHTVFSHLPIHQDGSCNGLQHYAALGRD 693
Query: 1978 SFEAAAVNLIAGDKPADVYSEIAERVHNIMKRDSEKDPATDPSALLAKLLIGQVDRKLVK 2157
S EAAAVNL+AGDKPADVY+EIA RV +I++ DS KDPATDP+ALLAKLLI QVDRKLVK
Sbjct: 694 SMEAAAVNLVAGDKPADVYTEIALRVDHIIRGDSIKDPATDPNALLAKLLIDQVDRKLVK 753
Query: 2158 QTVMTSVYGVTYVGAREQIKRRLEEKGLITDDRLLFSAACYAAKVTLAALGELFQAARAI 2337
QTVMTSVYGVTYVGAREQIKRRLEEKGLI DDRLLF+A+CYAAKVTLAALGELFQAAR
Sbjct: 754 QTVMTSVYGVTYVGAREQIKRRLEEKGLIDDDRLLFTASCYAAKVTLAALGELFQAARGT 813
Query: 2338 MGWLGDCAKIIASENQPVRWTTPLGLPVVQPYFKTQRHVIRTSLQVLALQREGDSVEVRK 2517
M WLGDCAK+IASENQPVRWTTPLGLPVVQPYFKTQRHVIRTSLQVLALQREGD+VEVRK
Sbjct: 814 MTWLGDCAKVIASENQPVRWTTPLGLPVVQPYFKTQRHVIRTSLQVLALQREGDTVEVRK 873
Query: 2518 QRTAFPPNFVHSLDGSHMMMTAIACRDGGLRFAGVHDSFWTHACDVDRMNQILRQKFVDL 2697
QRTAFPPNFVHSLDGSHMMMTA+ACRD GL+FAGVHDSFWTHACDVD+MN+ILR+KFV+L
Sbjct: 874 QRTAFPPNFVHSLDGSHMMMTAVACRDAGLQFAGVHDSFWTHACDVDQMNRILREKFVEL 933
Query: 2698 YNMPILESLLESFETSYPTLTFPPLPNRGDFDLNKVVQ 2811
Y+MPILE LLESF+ SYP LTFPPLP RGDFDL +V++
Sbjct: 934 YSMPILEDLLESFQNSYPALTFPPLPKRGDFDLVEVLE 971
>ref|XP_004242994.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic [Solanum
lycopersicum]
Length = 1007
Score = 1456 bits (3769), Expect = 0.0
Identities = 708/931 (76%), Positives = 810/931 (87%), Gaps = 1/931 (0%)
Frame = +1
Query: 22 SSSFPQTLKXXXXXXXXXXXXXXXXXXXXXNFPENPEKLLNLQVMPNGFRSSLTKESGDR 201
+SSFP+TLK N EN E+L+NLQ +PNG+ L KES R
Sbjct: 71 TSSFPKTLKLPIIQLPITVHSEVVCVSTDENLTENLEELVNLQKIPNGYPLVLQKESNKR 130
Query: 202 VFIQDPPWISSLFMKSLLFRGRNRSGVKIEFKEMERRKYY-LLRRRQIKAETEAWXXXXX 378
VFIQDPPW+SSLFM +L R + GV+ EF+E+ERR+ Y +LRRRQIKAETEAW
Sbjct: 131 VFIQDPPWVSSLFMNNLFVRAKQVKGVRREFREIERRRRYAMLRRRQIKAETEAWEQMVE 190
Query: 379 XXXXXXXXXXXXKLAPNLPHVKKLMLGWFEPLREAIEKEQNVQRSKKNKAAFAPYVDALP 558
KLAPNLP+VKKLMLGWFEPLR+AIE+EQN + ++K++ A+AP++D+LP
Sbjct: 191 EYRELEREMCEKKLAPNLPYVKKLMLGWFEPLRQAIEREQNAEMTQKHRTAYAPHIDSLP 250
Query: 559 ADKMAVIVMHKIMGLLMMGGKEDRCVRVVEAAVQIGVAIEHEVRIHSFLERTKKHQRMEV 738
ADKMAVIVMHK+MGLLMMGGKE+RCV+VV+AAVQIG+A+E+EVRIH+F+E+TKKHQ+
Sbjct: 251 ADKMAVIVMHKLMGLLMMGGKEERCVQVVQAAVQIGMAVENEVRIHNFMEKTKKHQKHMT 310
Query: 739 GAESQEDSIKEAAILRKRVKSLIKRNRVIEVQKLVRSEEFKSWGRDTQAKLGCCLIQLLT 918
GA+ QED +E ILRKRVKSLIKRNRV+EV+KL++SEE +SWGRDTQAKLGC L++LLT
Sbjct: 311 GAQGQEDMSRETMILRKRVKSLIKRNRVVEVRKLMQSEEPESWGRDTQAKLGCRLLELLT 370
Query: 919 QSAYVQPPVNQSADSPPDVRPAFRHIFKIATRESGQSLVKKYGVIECDPLVLAGLDKTVK 1098
++AYVQPPV+QSAD+PPD+RPAFRH+F+IATR+ G+++VKKYGVIECDPLV+ G+D+TVK
Sbjct: 371 ETAYVQPPVDQSADTPPDIRPAFRHVFRIATRDPGKNIVKKYGVIECDPLVVVGVDRTVK 430
Query: 1099 HMIIPYVPMLVPPKKWRGYDKGGYLFLPSYLMRTHGSRQQQDAVKAVPTKQMQKVYEALD 1278
M+IPYVPMLVPPKKWRGYDKGGYLFLPSYLMRTHGSR+QQDAV++VP KQMQ+VYEALD
Sbjct: 431 QMMIPYVPMLVPPKKWRGYDKGGYLFLPSYLMRTHGSRRQQDAVRSVPAKQMQQVYEALD 490
Query: 1279 TLGNTKWRVNKRILSVVESIWAAGGNLAGLVNREDVPIPELLSDDXXXXXXXXXXXXXXX 1458
TLG+TKWRVNKRILSVVE+IWA GGN+AGLV+R+DVPIPEL SDD
Sbjct: 491 TLGSTKWRVNKRILSVVETIWAGGGNIAGLVDRKDVPIPELHSDDIMELKRWKWRVRKAK 550
Query: 1459 XINQERHSQRCDTELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGIL 1638
INQE HSQRCDTELKLSVARK++DEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGIL
Sbjct: 551 KINQELHSQRCDTELKLSVARKLRDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGIL 610
Query: 1639 EFAEGRPLGKSGLRWLKIHLANLYGGGVEKLSYDGRISFVENYIAEIFDSADNSLNGNRW 1818
EFAEGRPLGKSGLRWLK+HLA+LY GG+EKL YD RI+FVEN+I +I DSA N LNGNRW
Sbjct: 611 EFAEGRPLGKSGLRWLKVHLASLYAGGIEKLCYDARIAFVENHIDDILDSAHNPLNGNRW 670
Query: 1819 WLKAEDPFQCLAACINLSEALRSSSPHTVVSHLPIHQDGSCNGLQHYAALGRDSFEAAAV 1998
WL AEDP QCLAACINLSEA++S SPHTV+SHLPIHQDGSCNGLQHYAALGRDS EAAAV
Sbjct: 671 WLNAEDPLQCLAACINLSEAVKSLSPHTVISHLPIHQDGSCNGLQHYAALGRDSMEAAAV 730
Query: 1999 NLIAGDKPADVYSEIAERVHNIMKRDSEKDPATDPSALLAKLLIGQVDRKLVKQTVMTSV 2178
NL+AG+KPADVY+EIA RV +I++ DS KDPATDP+ALLAKLLI QVDRKLVKQTVMTSV
Sbjct: 731 NLVAGEKPADVYTEIALRVDHIIRGDSTKDPATDPNALLAKLLIDQVDRKLVKQTVMTSV 790
Query: 2179 YGVTYVGAREQIKRRLEEKGLITDDRLLFSAACYAAKVTLAALGELFQAARAIMGWLGDC 2358
YGVTYVGAREQIKRRLEEKGLI DDRLLF+A+CYAAKVTLAALGELFQAAR M WLGDC
Sbjct: 791 YGVTYVGAREQIKRRLEEKGLIDDDRLLFTASCYAAKVTLAALGELFQAARGTMTWLGDC 850
Query: 2359 AKIIASENQPVRWTTPLGLPVVQPYFKTQRHVIRTSLQVLALQREGDSVEVRKQRTAFPP 2538
AK+IASENQPVRWTTPLGLPVVQPYFKTQRHVIRTSLQVLALQREGD+VEVRKQRTAFPP
Sbjct: 851 AKVIASENQPVRWTTPLGLPVVQPYFKTQRHVIRTSLQVLALQREGDAVEVRKQRTAFPP 910
Query: 2539 NFVHSLDGSHMMMTAIACRDGGLRFAGVHDSFWTHACDVDRMNQILRQKFVDLYNMPILE 2718
NFVHSLDGSHMMMTA+ACRD GL FAGVHDSFWTHACDVD+MN+ILR+KFV+LY+MPILE
Sbjct: 911 NFVHSLDGSHMMMTAVACRDAGLHFAGVHDSFWTHACDVDQMNRILREKFVELYSMPILE 970
Query: 2719 SLLESFETSYPTLTFPPLPNRGDFDLNKVVQ 2811
LLESF+ SYP LTFPPLP RGDFDL +V++
Sbjct: 971 DLLESFQESYPALTFPPLPKRGDFDLREVLE 1001
>ref|XP_015081184.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic [Solanum
pennellii]
Length = 1036
Score = 1456 bits (3768), Expect = 0.0
Identities = 708/931 (76%), Positives = 809/931 (86%), Gaps = 1/931 (0%)
Frame = +1
Query: 22 SSSFPQTLKXXXXXXXXXXXXXXXXXXXXXNFPENPEKLLNLQVMPNGFRSSLTKESGDR 201
+SSFP+TLK N EN E+L+NLQ +PNG+ L KES R
Sbjct: 100 TSSFPKTLKLPIIQLPITVHSEVVCVSTDENLTENLEELVNLQKIPNGYPLVLQKESNKR 159
Query: 202 VFIQDPPWISSLFMKSLLFRGRNRSGVKIEFKEM-ERRKYYLLRRRQIKAETEAWXXXXX 378
VFIQDPPW+SSLFM +L R + GV+ EF+E+ RR+Y +LRRRQIKAETEAW
Sbjct: 160 VFIQDPPWVSSLFMNNLFVRAKQVKGVRREFREIARRRRYAMLRRRQIKAETEAWEQMVE 219
Query: 379 XXXXXXXXXXXXKLAPNLPHVKKLMLGWFEPLREAIEKEQNVQRSKKNKAAFAPYVDALP 558
KLAPNLP+VKKLMLGWFEPLR+AIE+EQN + ++K++ A+AP++D+LP
Sbjct: 220 EYRELEREMCEKKLAPNLPYVKKLMLGWFEPLRQAIEREQNAEMTQKHRTAYAPHIDSLP 279
Query: 559 ADKMAVIVMHKIMGLLMMGGKEDRCVRVVEAAVQIGVAIEHEVRIHSFLERTKKHQRMEV 738
ADKMAVIVMHK+MGLLMMGGKE+RCV+VV+AAVQIG+A+E+EVRIH+F+E+TKKHQ+
Sbjct: 280 ADKMAVIVMHKLMGLLMMGGKEERCVQVVQAAVQIGMAVENEVRIHNFMEKTKKHQKHMT 339
Query: 739 GAESQEDSIKEAAILRKRVKSLIKRNRVIEVQKLVRSEEFKSWGRDTQAKLGCCLIQLLT 918
GA+ QED +E ILRKRVKSLIKRNRV+EV+KL++SEE +SWGRDTQAKLGC L++LLT
Sbjct: 340 GAQGQEDMSRETMILRKRVKSLIKRNRVVEVRKLMQSEEPESWGRDTQAKLGCRLLELLT 399
Query: 919 QSAYVQPPVNQSADSPPDVRPAFRHIFKIATRESGQSLVKKYGVIECDPLVLAGLDKTVK 1098
++AYVQPPV+QSAD+PPD+RPAFRH+F+IATR+ G+++VKKYGVIECDPLV+ G+D+TVK
Sbjct: 400 ETAYVQPPVDQSADTPPDIRPAFRHVFRIATRDPGKNIVKKYGVIECDPLVVVGVDRTVK 459
Query: 1099 HMIIPYVPMLVPPKKWRGYDKGGYLFLPSYLMRTHGSRQQQDAVKAVPTKQMQKVYEALD 1278
M+IPYVPMLVPPKKWRGYDKGGYLFLPSYLMRTHGSR+QQDAV++VP KQMQ+VYEALD
Sbjct: 460 QMMIPYVPMLVPPKKWRGYDKGGYLFLPSYLMRTHGSRRQQDAVRSVPAKQMQQVYEALD 519
Query: 1279 TLGNTKWRVNKRILSVVESIWAAGGNLAGLVNREDVPIPELLSDDXXXXXXXXXXXXXXX 1458
TLG+TKWRVNKRILSVVESIWA GGN+AGLV+R+DVPIPEL SDD
Sbjct: 520 TLGSTKWRVNKRILSVVESIWAGGGNIAGLVDRKDVPIPELHSDDIMELKRWKWRVRKAK 579
Query: 1459 XINQERHSQRCDTELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGIL 1638
INQE HSQRCDTELKLSVARK++DEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGIL
Sbjct: 580 KINQELHSQRCDTELKLSVARKLRDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGIL 639
Query: 1639 EFAEGRPLGKSGLRWLKIHLANLYGGGVEKLSYDGRISFVENYIAEIFDSADNSLNGNRW 1818
EFAEGRPLGKSGLRWLK+HLA+LY GG+EKL YD RI+FVEN+I +I DSA N LNGNRW
Sbjct: 640 EFAEGRPLGKSGLRWLKVHLASLYAGGIEKLCYDARIAFVENHIDDILDSAHNPLNGNRW 699
Query: 1819 WLKAEDPFQCLAACINLSEALRSSSPHTVVSHLPIHQDGSCNGLQHYAALGRDSFEAAAV 1998
WL AEDP QCLAACINLSEA++S SPHTV+SHLPIHQDGSCNGLQHYAALGRDS EAAAV
Sbjct: 700 WLNAEDPLQCLAACINLSEAVKSLSPHTVISHLPIHQDGSCNGLQHYAALGRDSMEAAAV 759
Query: 1999 NLIAGDKPADVYSEIAERVHNIMKRDSEKDPATDPSALLAKLLIGQVDRKLVKQTVMTSV 2178
NL+AG+KPADVY+EIA RV +I++ DS KDPATDP+ALLAKLLI QVDRKLVKQTVMTSV
Sbjct: 760 NLVAGEKPADVYTEIALRVDHIIRGDSNKDPATDPNALLAKLLIDQVDRKLVKQTVMTSV 819
Query: 2179 YGVTYVGAREQIKRRLEEKGLITDDRLLFSAACYAAKVTLAALGELFQAARAIMGWLGDC 2358
YGVTYVGAREQIKRRLEEKGLI DDRLLF+A+CYAAKVTLAALGELFQAAR M WLGDC
Sbjct: 820 YGVTYVGAREQIKRRLEEKGLIDDDRLLFTASCYAAKVTLAALGELFQAARGTMTWLGDC 879
Query: 2359 AKIIASENQPVRWTTPLGLPVVQPYFKTQRHVIRTSLQVLALQREGDSVEVRKQRTAFPP 2538
AK+IASENQPVRWTTPLGLPVVQPYFKTQRHVIRTSLQVLALQREGD+VEVRKQRTAFPP
Sbjct: 880 AKVIASENQPVRWTTPLGLPVVQPYFKTQRHVIRTSLQVLALQREGDAVEVRKQRTAFPP 939
Query: 2539 NFVHSLDGSHMMMTAIACRDGGLRFAGVHDSFWTHACDVDRMNQILRQKFVDLYNMPILE 2718
NFVHSLDGSHMMMTA+ACRD GL FAGVHDSFWTHACDVD+MN+ILR+KFV+LY+MPILE
Sbjct: 940 NFVHSLDGSHMMMTAVACRDAGLHFAGVHDSFWTHACDVDQMNRILREKFVELYSMPILE 999
Query: 2719 SLLESFETSYPTLTFPPLPNRGDFDLNKVVQ 2811
LLESF+ SYP LTFPPLP RGDFDL +V++
Sbjct: 1000 DLLESFQESYPALTFPPLPKRGDFDLREVLE 1030
>sp|Q8L6J1.2|RPO3B_TOBAC RecName: Full=DNA-directed RNA polymerase 3B, chloroplastic; AltName:
Full=NictaRpoT3-tom; AltName: Full=T7 bacteriophage-type
single subunit RNA polymerase 3B; Flags: Precursor
[Nicotiana tabacum] gi|21425667|emb|CAC95021.2|
chloroplast RNA polymerase [Nicotiana tabacum]
Length = 977
Score = 1448 bits (3749), Expect = 0.0
Identities = 717/939 (76%), Positives = 815/939 (86%), Gaps = 2/939 (0%)
Frame = +1
Query: 1 SQMPQRSSSSFPQTLKXXXXXXXXXXXXXXXXXXXXXNFPENPEKLLNLQVMPNGFRSSL 180
SQ S+SSFP+TLK + EN E+L+NLQ +PNGF L
Sbjct: 38 SQSSSLSTSSFPKTLKLPVIHMPINNIQSQTTVCVSTD--ENLEELVNLQKIPNGF---L 92
Query: 181 TKESGDRVFIQDPPWISSLFMKSLLFRGRNRSGVKIEFKEMERRKYY-LLRRRQIKAETE 357
KES RVFIQDPPW+SSLFM SL R + GV+ EF+E+ERR+ Y +LRRRQIKAETE
Sbjct: 93 NKESNKRVFIQDPPWVSSLFMNSLFVRAKQVQGVRREFREIERRRRYAMLRRRQIKAETE 152
Query: 358 AWXXXXXXXXXXXXXXXXXKLAPNLPHVKKLMLGWFEPLREAIEKEQNVQRSKKNKAAFA 537
AW KLAPNLP+VKKL+LGWFEPLR+AIEKEQN + + K++AAFA
Sbjct: 153 AWEQMVEEYRELEREMCEKKLAPNLPYVKKLLLGWFEPLRQAIEKEQNAETTVKHRAAFA 212
Query: 538 PYVDALPADKMAVIVMHKIMGLLMMGGKEDRCVRVVEAAVQIGVAIEHEVRIHSFLERTK 717
P++D+LPADKMAVIVMHK+MGLLMMGGKE+RCV+VV+AAVQIG+A+E+EVRIH+FLE+TK
Sbjct: 213 PHIDSLPADKMAVIVMHKLMGLLMMGGKEERCVQVVQAAVQIGMAVENEVRIHNFLEKTK 272
Query: 718 KHQRMEVGAESQEDSIKEAAILRKRVKSLIKRNRVIEVQKLVRSEEFKSWGRDTQAKLGC 897
K Q+ GA+SQED KE ILRKRVKSLIKRNRV+EV+KL++SEE +SWGRDTQAKLGC
Sbjct: 273 KLQKHMTGAQSQEDMSKETMILRKRVKSLIKRNRVVEVRKLMKSEEPESWGRDTQAKLGC 332
Query: 898 CLIQLLTQSAYVQPPVNQSADSPPDVRPAFRHIFKIATRESGQSLVKKYGVIECDPLVLA 1077
L++LLT++AYVQ PV+QSAD+PPD+RPAFRH+FKIATR+ G+++VKKYGVIECDPLV+A
Sbjct: 333 RLLELLTETAYVQRPVDQSADTPPDIRPAFRHVFKIATRDPGKNIVKKYGVIECDPLVVA 392
Query: 1078 GLDKTVKHMIIPYVPMLVPPKKWRGYDKGGYLFLPSYLMRTHGSRQQQDAVKAVPTKQMQ 1257
G+D+TVK M+IPYVPMLVPPKKWRGYDKGGYLFLPSYLMRTHGSR+QQDAV+ VPTKQMQ
Sbjct: 393 GVDRTVKQMMIPYVPMLVPPKKWRGYDKGGYLFLPSYLMRTHGSRRQQDAVRGVPTKQMQ 452
Query: 1258 KVYEALDTLGNTKWRVNKRILSVVESIWAAGGNLAGLVNREDVPIPELL-SDDXXXXXXX 1434
+VYEALDTLG+TKWRVNKRIL+VVESIWA GGN+AGLV+R+DVPIPEL SDD
Sbjct: 453 QVYEALDTLGSTKWRVNKRILNVVESIWAGGGNIAGLVDRKDVPIPELSNSDDIMEVKKW 512
Query: 1435 XXXXXXXXXINQERHSQRCDTELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLS 1614
INQE HSQRCDTELKLSVARK+KDEEGFYYPHNLDFRGRAYPMHPHLNHLS
Sbjct: 513 KWKVRKSKKINQELHSQRCDTELKLSVARKLKDEEGFYYPHNLDFRGRAYPMHPHLNHLS 572
Query: 1615 SDLCRGILEFAEGRPLGKSGLRWLKIHLANLYGGGVEKLSYDGRISFVENYIAEIFDSAD 1794
SDLCRGILEFAEGRPLGKSGLRWLKIHLA+LY GGVEKL YD R++FVEN+I +I DSA+
Sbjct: 573 SDLCRGILEFAEGRPLGKSGLRWLKIHLASLYAGGVEKLCYDARLAFVENHIHDILDSAN 632
Query: 1795 NSLNGNRWWLKAEDPFQCLAACINLSEALRSSSPHTVVSHLPIHQDGSCNGLQHYAALGR 1974
N LNGNRWWL AEDPFQCLAACINLSEAL+SSSPHTV+SHLPIHQDGSCNGLQHYAALGR
Sbjct: 633 NPLNGNRWWLNAEDPFQCLAACINLSEALKSSSPHTVISHLPIHQDGSCNGLQHYAALGR 692
Query: 1975 DSFEAAAVNLIAGDKPADVYSEIAERVHNIMKRDSEKDPATDPSALLAKLLIGQVDRKLV 2154
DS EAAAVNL+AG+KPADVY+EIA RV +I++ DS KDPA DP+ALLAKLLI QVDRKLV
Sbjct: 693 DSMEAAAVNLVAGEKPADVYTEIALRVDHIIRGDSIKDPAIDPNALLAKLLIDQVDRKLV 752
Query: 2155 KQTVMTSVYGVTYVGAREQIKRRLEEKGLITDDRLLFSAACYAAKVTLAALGELFQAARA 2334
KQTVMTSVYGVTYVGAREQIKRRLEEKGLI DDRLLF+A+CYAAKVTLAALGELFQAAR
Sbjct: 753 KQTVMTSVYGVTYVGAREQIKRRLEEKGLIDDDRLLFTASCYAAKVTLAALGELFQAARG 812
Query: 2335 IMGWLGDCAKIIASENQPVRWTTPLGLPVVQPYFKTQRHVIRTSLQVLALQREGDSVEVR 2514
M WLGDCAK+IA ENQPVRWTTPLGLPVVQPYFKTQRHVIRTSLQ+LALQREGD+VEVR
Sbjct: 813 TMTWLGDCAKVIALENQPVRWTTPLGLPVVQPYFKTQRHVIRTSLQILALQREGDAVEVR 872
Query: 2515 KQRTAFPPNFVHSLDGSHMMMTAIACRDGGLRFAGVHDSFWTHACDVDRMNQILRQKFVD 2694
KQRTAFPPNFVHSLDGSHMMMTA+ACRD GL+FAGVHDSFWTHACDVD+MN+ILR+KFV+
Sbjct: 873 KQRTAFPPNFVHSLDGSHMMMTAVACRDAGLQFAGVHDSFWTHACDVDQMNRILREKFVE 932
Query: 2695 LYNMPILESLLESFETSYPTLTFPPLPNRGDFDLNKVVQ 2811
LY++PILE LLE+F+ SYP LTFPPLP RGDF+L +V++
Sbjct: 933 LYSLPILEDLLENFQKSYPALTFPPLPKRGDFNLREVLE 971
>ref|XP_009608694.1| PREDICTED: DNA-directed RNA polymerase 3B, chloroplastic isoform X1
[Nicotiana tomentosiformis]
Length = 919
Score = 1442 bits (3733), Expect = 0.0
Identities = 706/899 (78%), Positives = 802/899 (89%), Gaps = 2/899 (0%)
Frame = +1
Query: 121 ENPEKLLNLQVMPNGFRSSLTKESGDRVFIQDPPWISSLFMKSLLFRGRNRSGVKIEFKE 300
EN E+L+NLQ +PNGF L KES RVFIQDPPW+SSLFM SL R + GV+ EF+E
Sbjct: 18 ENLEELVNLQKIPNGF---LNKESNKRVFIQDPPWVSSLFMNSLFVRAKQVQGVRREFRE 74
Query: 301 MERRKYY-LLRRRQIKAETEAWXXXXXXXXXXXXXXXXXKLAPNLPHVKKLMLGWFEPLR 477
+ERR+ Y +LRRRQIKAETEAW KLAPNLP+VKKL+LGWFEPLR
Sbjct: 75 IERRRRYAMLRRRQIKAETEAWEQMVEEYRELEREMCEKKLAPNLPYVKKLLLGWFEPLR 134
Query: 478 EAIEKEQNVQRSKKNKAAFAPYVDALPADKMAVIVMHKIMGLLMMGGKEDRCVRVVEAAV 657
+AIEKEQN + + K++AAFAP++D+LPADKMAVIVMHK+MGLLMMGGKE+RCV+VV+AAV
Sbjct: 135 QAIEKEQNAETTVKHRAAFAPHIDSLPADKMAVIVMHKLMGLLMMGGKEERCVQVVQAAV 194
Query: 658 QIGVAIEHEVRIHSFLERTKKHQRMEVGAESQEDSIKEAAILRKRVKSLIKRNRVIEVQK 837
QIG+A+E+EVRIH+FLE+TKK Q+ GA+SQED +E ILRKRVKSLIKRNRV+EV+K
Sbjct: 195 QIGMAVENEVRIHNFLEKTKKLQKHMTGAQSQEDMSRETMILRKRVKSLIKRNRVVEVRK 254
Query: 838 LVRSEEFKSWGRDTQAKLGCCLIQLLTQSAYVQPPVNQSADSPPDVRPAFRHIFKIATRE 1017
L++SEE +SWGRDTQAKLGC L++LLT++AYVQ PV+QSAD+PPD+RPAFRH+FKIATR+
Sbjct: 255 LMKSEEPESWGRDTQAKLGCRLLELLTETAYVQRPVDQSADTPPDIRPAFRHVFKIATRD 314
Query: 1018 SGQSLVKKYGVIECDPLVLAGLDKTVKHMIIPYVPMLVPPKKWRGYDKGGYLFLPSYLMR 1197
G+++VKKYGVIECDPLV+AG+D+TVK M+IPYVPMLVPPKKWRGYDKGGYLFLPSYLMR
Sbjct: 315 PGKNIVKKYGVIECDPLVVAGVDRTVKQMMIPYVPMLVPPKKWRGYDKGGYLFLPSYLMR 374
Query: 1198 THGSRQQQDAVKAVPTKQMQKVYEALDTLGNTKWRVNKRILSVVESIWAAGGNLAGLVNR 1377
THGSR+QQDAV+ VPTKQMQ+VYEALDTLG+TKWRVNKRIL+VVESIWA GGN+AGLV+R
Sbjct: 375 THGSRRQQDAVRGVPTKQMQQVYEALDTLGSTKWRVNKRILNVVESIWAGGGNIAGLVDR 434
Query: 1378 EDVPIPELL-SDDXXXXXXXXXXXXXXXXINQERHSQRCDTELKLSVARKMKDEEGFYYP 1554
+DVPIPEL SDD INQE HSQRCDTELKLSVARK+KDEEGFYYP
Sbjct: 435 KDVPIPELSNSDDIMEVKKWKWKVRKSKKINQELHSQRCDTELKLSVARKLKDEEGFYYP 494
Query: 1555 HNLDFRGRAYPMHPHLNHLSSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYGGGVEKLS 1734
HNLDFRGRAYPMHPHLNHLSSDLCRGILEFAEGRPLGKSGLRWLKIHLA+LY GGVEKL
Sbjct: 495 HNLDFRGRAYPMHPHLNHLSSDLCRGILEFAEGRPLGKSGLRWLKIHLASLYAGGVEKLC 554
Query: 1735 YDGRISFVENYIAEIFDSADNSLNGNRWWLKAEDPFQCLAACINLSEALRSSSPHTVVSH 1914
YD R++FVEN+I +I DSA+N LNGNRWWL AEDPFQCLAACINLSEAL+SSSPHTV+SH
Sbjct: 555 YDARLAFVENHIHDILDSANNPLNGNRWWLNAEDPFQCLAACINLSEALKSSSPHTVISH 614
Query: 1915 LPIHQDGSCNGLQHYAALGRDSFEAAAVNLIAGDKPADVYSEIAERVHNIMKRDSEKDPA 2094
LPIHQDGSCNGLQHYAALGRDS EAAAVNL+AG+KPADVY+EIA RV +I++ DS KDPA
Sbjct: 615 LPIHQDGSCNGLQHYAALGRDSMEAAAVNLVAGEKPADVYTEIALRVDHIIRGDSIKDPA 674
Query: 2095 TDPSALLAKLLIGQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGLITDDRLLFSAA 2274
DP+ALLAKLLI QVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGLI DDRLLF+A+
Sbjct: 675 IDPNALLAKLLIDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGLIDDDRLLFTAS 734
Query: 2275 CYAAKVTLAALGELFQAARAIMGWLGDCAKIIASENQPVRWTTPLGLPVVQPYFKTQRHV 2454
CYAAKVTLAALGELFQAAR M WLGDCAK+IA ENQPVRWTTPLGLPVVQPYFKTQRHV
Sbjct: 735 CYAAKVTLAALGELFQAARGTMTWLGDCAKVIALENQPVRWTTPLGLPVVQPYFKTQRHV 794
Query: 2455 IRTSLQVLALQREGDSVEVRKQRTAFPPNFVHSLDGSHMMMTAIACRDGGLRFAGVHDSF 2634
IRTSLQ+LALQREGD+VEVRKQRTAFPPNFVHSLDGSHMMMTA+ACRD GL+FAGVHDSF
Sbjct: 795 IRTSLQILALQREGDAVEVRKQRTAFPPNFVHSLDGSHMMMTAVACRDAGLQFAGVHDSF 854
Query: 2635 WTHACDVDRMNQILRQKFVDLYNMPILESLLESFETSYPTLTFPPLPNRGDFDLNKVVQ 2811
WTHACDVD+MN+ILR+KFV+LY++PILE LLE+F+ SYP LTFPPLP RGDF+L +V++
Sbjct: 855 WTHACDVDQMNRILREKFVELYSLPILEDLLENFQKSYPALTFPPLPKRGDFNLREVLE 913
>gb|EPS64933.1| hypothetical protein M569_09836 [Genlisea aurea]
Length = 952
Score = 1436 bits (3717), Expect = 0.0
Identities = 709/931 (76%), Positives = 790/931 (84%), Gaps = 2/931 (0%)
Frame = +1
Query: 22 SSSFPQTLKXXXXXXXXXXXXXXXXXXXXXNFPENPEKLLNLQVMPNG-FRSSLTKESGD 198
SSSFP+ +K NF ENP L + V PNG S +KE D
Sbjct: 16 SSSFPRNVKLPSLHTPAPFLSHPVSDSSDDNFTENPGNLATMLVTPNGGISSEFSKELRD 75
Query: 199 RV-FIQDPPWISSLFMKSLLFRGRNRSGVKIEFKEMERRKYYLLRRRQIKAETEAWXXXX 375
RV IQDPPWISSL++KSLLFR RNR VKIEFKEMER KYY LRRRQIKAETEAW
Sbjct: 76 RVVIIQDPPWISSLYIKSLLFRNRNRCDVKIEFKEMERHKYYELRRRQIKAETEAWENMV 135
Query: 376 XXXXXXXXXXXXXKLAPNLPHVKKLMLGWFEPLREAIEKEQNVQRSKKNKAAFAPYVDAL 555
K+APNLP+ KKLMLGWFEPL EAI EQ++Q+ KKN+ AFAPY+D+L
Sbjct: 136 KEYKELEKEMCEKKMAPNLPYFKKLMLGWFEPLTEAIRTEQSLQKPKKNRIAFAPYIDSL 195
Query: 556 PADKMAVIVMHKIMGLLMMGGKEDRCVRVVEAAVQIGVAIEHEVRIHSFLERTKKHQRME 735
P + MAVIVMHKIMGLLMMGGK+DRC+RVVEAA+QIG AIE EVRIH+FLE+TK HQ+
Sbjct: 196 PPESMAVIVMHKIMGLLMMGGKQDRCIRVVEAALQIGKAIEQEVRIHAFLEKTK-HQKEA 254
Query: 736 VGAESQEDSIKEAAILRKRVKSLIKRNRVIEVQKLVRSEEFKSWGRDTQAKLGCCLIQLL 915
V +ESQE+S ++AA LRKRVK+L++R R +EVQKLV+SE + W R+ QAKLGCCLI LL
Sbjct: 255 VASESQENSCEKAANLRKRVKNLVRRGRGVEVQKLVKSENHEPWTREIQAKLGCCLINLL 314
Query: 916 TQSAYVQPPVNQSADSPPDVRPAFRHIFKIATRESGQSLVKKYGVIECDPLVLAGLDKTV 1095
TQSAYVQPPV+QSADSPPDVRPAFRH FKIATRE Q++V++YGVIECDPL+L G + V
Sbjct: 315 TQSAYVQPPVSQSADSPPDVRPAFRHFFKIATREPRQTVVRRYGVIECDPLILDGFESNV 374
Query: 1096 KHMIIPYVPMLVPPKKWRGYDKGGYLFLPSYLMRTHGSRQQQDAVKAVPTKQMQKVYEAL 1275
KHM++P++PML+PPKKW+GYDKGGYLFLPSY+MRTHGSR+QQDAVK V ++MQKV+EAL
Sbjct: 375 KHMMVPHIPMLIPPKKWKGYDKGGYLFLPSYVMRTHGSRRQQDAVKTVSPRKMQKVFEAL 434
Query: 1276 DTLGNTKWRVNKRILSVVESIWAAGGNLAGLVNREDVPIPELLSDDXXXXXXXXXXXXXX 1455
DTLGNTKWRVNK ILSVVE IWAAGGN+AGLVNREDVP+PEL SDD
Sbjct: 435 DTLGNTKWRVNKSILSVVEDIWAAGGNIAGLVNREDVPLPELHSDDPIEIKKWKFSIRKA 494
Query: 1456 XXINQERHSQRCDTELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGI 1635
N E HS RCDTELKLSVAR MKDEEGFYYPHN+DFRGRAYPMHPHLNHLSSDLCRGI
Sbjct: 495 KKNNMEMHSLRCDTELKLSVARAMKDEEGFYYPHNVDFRGRAYPMHPHLNHLSSDLCRGI 554
Query: 1636 LEFAEGRPLGKSGLRWLKIHLANLYGGGVEKLSYDGRISFVENYIAEIFDSADNSLNGNR 1815
LEF+EGRPLGKSGL WLK+HLANL+GGGV+KL YD R+SFVEN I E+FDSADN L+GNR
Sbjct: 555 LEFSEGRPLGKSGLYWLKLHLANLFGGGVQKLPYDERLSFVENNITEVFDSADNPLSGNR 614
Query: 1816 WWLKAEDPFQCLAACINLSEALRSSSPHTVVSHLPIHQDGSCNGLQHYAALGRDSFEAAA 1995
WWLKAEDPFQ LAACIN+SEALRSSSPHTV+SHLPIHQDGSCNGLQHYAALGRDSFEAAA
Sbjct: 615 WWLKAEDPFQFLAACINISEALRSSSPHTVISHLPIHQDGSCNGLQHYAALGRDSFEAAA 674
Query: 1996 VNLIAGDKPADVYSEIAERVHNIMKRDSEKDPATDPSALLAKLLIGQVDRKLVKQTVMTS 2175
VNL+AG KP DVYSEIAERV +IMK DSEKDPA DP+A+LAKLLIGQVDRKLVKQTVMTS
Sbjct: 675 VNLVAGHKPTDVYSEIAERVLDIMKSDSEKDPADDPNAVLAKLLIGQVDRKLVKQTVMTS 734
Query: 2176 VYGVTYVGAREQIKRRLEEKGLITDDRLLFSAACYAAKVTLAALGELFQAARAIMGWLGD 2355
VYGVTYVGAREQI++RL EKG I DD++LF AACYAAKVT+AALG+LFQAARAIM WLGD
Sbjct: 735 VYGVTYVGAREQIRKRLAEKGFINDDKVLFMAACYAAKVTMAALGQLFQAARAIMSWLGD 794
Query: 2356 CAKIIASENQPVRWTTPLGLPVVQPYFKTQRHVIRTSLQVLALQREGDSVEVRKQRTAFP 2535
CAKIIASENQPVRWTTPLGLPVVQPYFKT+RHVIRTSLQVLALQREGDSVEVRKQ+TAFP
Sbjct: 795 CAKIIASENQPVRWTTPLGLPVVQPYFKTKRHVIRTSLQVLALQREGDSVEVRKQKTAFP 854
Query: 2536 PNFVHSLDGSHMMMTAIACRDGGLRFAGVHDSFWTHACDVDRMNQILRQKFVDLYNMPIL 2715
PNFVHSLDGSHMMMTA+ACRD GLRFAGVHDSFWTHACDVD+MNQILR+KFVDLY+MPIL
Sbjct: 855 PNFVHSLDGSHMMMTAVACRDAGLRFAGVHDSFWTHACDVDKMNQILREKFVDLYSMPIL 914
Query: 2716 ESLLESFETSYPTLTFPPLPNRGDFDLNKVV 2808
E LLESF++SYPTL FPPLP RGDFDL V+
Sbjct: 915 EDLLESFQSSYPTLRFPPLPKRGDFDLRNVL 945
>ref|XP_002274521.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic [Vitis
vinifera]
Length = 979
Score = 1373 bits (3553), Expect = 0.0
Identities = 671/878 (76%), Positives = 761/878 (86%), Gaps = 2/878 (0%)
Frame = +1
Query: 184 KESGDRVFIQDPPWISSLFMKSLLFRGRNRS-GVKIEFKEMERRKYYLLRRRQIKAETEA 360
KES R+F+QDPPWISS R R VK+EF+E ERR Y LLRRRQ+KAETEA
Sbjct: 98 KESIPRIFVQDPPWISSFLFHDWCERNRRTGQNVKLEFRETERRNYGLLRRRQVKAETEA 157
Query: 361 WXXXXXXXXXXXXXXXXXKLAPNLPHVKKLMLGWFEPLREAIEKEQNVQRSKKNKAAFAP 540
W KLAPNLP+VK L LGWFEPLREAI+KEQ QR+KK KAA+AP
Sbjct: 158 WERMVEEYREIEREMCEKKLAPNLPYVKALFLGWFEPLREAIDKEQRAQRTKKQKAAYAP 217
Query: 541 YVDALPADKMAVIVMHKIMGLLMMGGKEDRCVRVVEAAVQIGVAIEHEVRIHSFLERTKK 720
+++ LPADKMAVIVMHK+MGL+MMG E+ CVRVV+AAVQIG+AIE EVRIHSFLE+TK
Sbjct: 218 HIELLPADKMAVIVMHKMMGLVMMG-HEEGCVRVVQAAVQIGMAIEQEVRIHSFLEKTKN 276
Query: 721 HQRMEVGAESQEDSIKEAAILRKRVKSLIKRNRVIEVQKLVRSEEFKSWGRDTQAKLGCC 900
+R + SQE ++E ILRKRVKS I++ ++IEVQKLV++EE WGRDTQAKLG
Sbjct: 277 FERHKTVGHSQE-GLREKEILRKRVKSFIRKKKIIEVQKLVKNEEITPWGRDTQAKLGSR 335
Query: 901 LIQLLTQSAYVQPPVNQSADSPPDVRPAFRHIFKIATRESGQSLVKKYGVIECDPLVLAG 1080
LI+LLT++AYVQ PVNQSAD PPDVRPAFRH FK T+ESGQ +KYGVIECDPLVL G
Sbjct: 336 LIELLTETAYVQTPVNQSADCPPDVRPAFRHTFKTVTKESGQKDWRKYGVIECDPLVLIG 395
Query: 1081 LDKTVKHMIIPYVPMLVPPKKWRGYDKGGYLFLPSYLMRTHGSRQQQDAVKAVPTKQMQK 1260
LD+T KHM+IPYVPML+PPKKW+GYDKGGYLFLPSY+MRTHGSR+QQDAVK+VP +Q+QK
Sbjct: 396 LDRTAKHMVIPYVPMLIPPKKWKGYDKGGYLFLPSYVMRTHGSRKQQDAVKSVPRRQLQK 455
Query: 1261 VYEALDTLGNTKWRVNKRILSVVESIWAAGGNLAGLVNREDVPIPELLS-DDXXXXXXXX 1437
V+EALDTLGNTKWR+N+R+LSVVESIWA GGNL GLV+RE+VP+PE S +D
Sbjct: 456 VFEALDTLGNTKWRINRRVLSVVESIWARGGNLGGLVDRENVPLPEKPSTEDLTEIQNWK 515
Query: 1438 XXXXXXXXINQERHSQRCDTELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSS 1617
INQERHS RCDTE+KLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSS
Sbjct: 516 WNARKAKKINQERHSLRCDTEIKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSS 575
Query: 1618 DLCRGILEFAEGRPLGKSGLRWLKIHLANLYGGGVEKLSYDGRISFVENYIAEIFDSADN 1797
DLCRG+LEFAEGRPLGKSGLRWLKI LANLY GGVEKLSYDGR++FV+N++ ++FDSADN
Sbjct: 576 DLCRGVLEFAEGRPLGKSGLRWLKIQLANLYAGGVEKLSYDGRLAFVDNHLDDVFDSADN 635
Query: 1798 SLNGNRWWLKAEDPFQCLAACINLSEALRSSSPHTVVSHLPIHQDGSCNGLQHYAALGRD 1977
LNGNRWWL AEDPFQCLAACINLSEALRSSSPHTV+SHLPIHQDGSCNGLQHYAALGR+
Sbjct: 636 PLNGNRWWLTAEDPFQCLAACINLSEALRSSSPHTVISHLPIHQDGSCNGLQHYAALGRN 695
Query: 1978 SFEAAAVNLIAGDKPADVYSEIAERVHNIMKRDSEKDPATDPSALLAKLLIGQVDRKLVK 2157
S EA+AVNL+AG+KPADVYSEIA RVH IMKRDS KDPATDP ALLAK+LIGQVDRKLVK
Sbjct: 696 SLEASAVNLVAGEKPADVYSEIAARVHEIMKRDSNKDPATDPKALLAKVLIGQVDRKLVK 755
Query: 2158 QTVMTSVYGVTYVGAREQIKRRLEEKGLITDDRLLFSAACYAAKVTLAALGELFQAARAI 2337
QTVMTSVYGVTY+GAREQIKRRL EKGLITD+RLLF+AACYAAKVTLAALGE+FQAAR I
Sbjct: 756 QTVMTSVYGVTYIGAREQIKRRLAEKGLITDERLLFTAACYAAKVTLAALGEIFQAARDI 815
Query: 2338 MGWLGDCAKIIASENQPVRWTTPLGLPVVQPYFKTQRHVIRTSLQVLALQREGDSVEVRK 2517
M WLG+CAK+IASENQPV+WTTPLGLPV+QPY K++RH+IRTSLQVLALQREG V +RK
Sbjct: 816 MAWLGECAKVIASENQPVQWTTPLGLPVIQPYCKSERHLIRTSLQVLALQREGSVVVIRK 875
Query: 2518 QRTAFPPNFVHSLDGSHMMMTAIACRDGGLRFAGVHDSFWTHACDVDRMNQILRQKFVDL 2697
QRTAFPPNFVHSLDGSHMMMTA+ACRD GL FAGVHDSFWTHACDVD+MNQILR+KFV+L
Sbjct: 876 QRTAFPPNFVHSLDGSHMMMTAVACRDAGLCFAGVHDSFWTHACDVDKMNQILREKFVEL 935
Query: 2698 YNMPILESLLESFETSYPTLTFPPLPNRGDFDLNKVVQ 2811
Y+MPILE+LLESF+TS+PTLTFPPLP+RG+FDL +V++
Sbjct: 936 YSMPILENLLESFQTSHPTLTFPPLPDRGNFDLREVLE 973
>ref|XP_007203225.1| hypothetical protein PRUPE_ppa000868mg [Prunus persica]
gi|462398756|gb|EMJ04424.1| hypothetical protein
PRUPE_ppa000868mg [Prunus persica]
Length = 976
Score = 1358 bits (3514), Expect = 0.0
Identities = 663/895 (74%), Positives = 756/895 (84%), Gaps = 1/895 (0%)
Frame = +1
Query: 130 EKLLNLQVMPNGFRSSLTKESGDRVFIQDPPWISSLFMKSLLFRGRNRSGVKIEFKEMER 309
E +N Q+ + F +ES R+FIQDPPWI+SLF+K + R +K+E KE+ER
Sbjct: 79 ENSMNFQIPMSEFHLITPQESAPRIFIQDPPWIASLFLKGIYKRANQE--LKLESKEIER 136
Query: 310 RKYYLLRRRQIKAETEAWXXXXXXXXXXXXXXXXXKLAPNLPHVKKLMLGWFEPLREAIE 489
R Y +LRRRQIKAETEAW KLAPNLP+VK L LGWFEPLREAI
Sbjct: 137 RNYNVLRRRQIKAETEAWERMVDEYKDLEKVMREKKLAPNLPYVKALFLGWFEPLREAIA 196
Query: 490 KEQNVQRSKKNKAAFAPYVDALPADKMAVIVMHKIMGLLMMGGKEDRCVRVVEAAVQIGV 669
+EQ Q++KK+KAAFAP++D LPADKMA+IVMHK+MGL+M+G +D CV+VV+AAV IG+
Sbjct: 197 REQKTQQTKKHKAAFAPHIDLLPADKMALIVMHKMMGLVMVGN-QDGCVQVVQAAVHIGM 255
Query: 670 AIEHEVRIHSFLERTKKHQRMEVGAESQEDSIKEAAILRKRVKSLIKRNRVIEVQKLVRS 849
AIE EVRIHSFLE+TK Q+ + G ++ KE ILRKRV LI+R R+ EVQKL+
Sbjct: 256 AIEQEVRIHSFLEKTKNLQKKKTGVADEDGLSKEKEILRKRVNGLIRRKRLNEVQKLLIK 315
Query: 850 EEFKSWGRDTQAKLGCCLIQLLTQSAYVQPPVNQSADSPPDVRPAFRHIFKIATRESGQS 1029
EE K WGRD QAKLG LI+LLT++AYVQPP++Q ADSPPDVRPAFRH FK + GQ
Sbjct: 316 EEMKPWGRDKQAKLGSRLIELLTETAYVQPPLSQLADSPPDVRPAFRHRFKAVAKSPGQK 375
Query: 1030 LVKKYGVIECDPLVLAGLDKTVKHMIIPYVPMLVPPKKWRGYDKGGYLFLPSYLMRTHGS 1209
+VK YGVIECDPLVL GLDKT KHM+IPYVPMLVPPK+W+GYDKGG+LFLPSY+MRTHGS
Sbjct: 376 IVKNYGVIECDPLVLTGLDKTAKHMLIPYVPMLVPPKRWKGYDKGGHLFLPSYVMRTHGS 435
Query: 1210 RQQQDAVKAVPTKQMQKVYEALDTLGNTKWRVNKRILSVVESIWAAGGNLAGLVNREDVP 1389
R+Q DA++ + QMQKV+EALD LG+TKWRVNK++LSVVESIWA GGN+AGLVNREDVP
Sbjct: 436 RKQVDAMRNISRNQMQKVFEALDMLGSTKWRVNKKVLSVVESIWARGGNIAGLVNREDVP 495
Query: 1390 IPELL-SDDXXXXXXXXXXXXXXXXINQERHSQRCDTELKLSVARKMKDEEGFYYPHNLD 1566
+P+ S+D INQERHSQRCDTELKLSVARKMKDEEGFYYPHNLD
Sbjct: 496 VPDKSPSEDLKEIQEWKWSVRKAKKINQERHSQRCDTELKLSVARKMKDEEGFYYPHNLD 555
Query: 1567 FRGRAYPMHPHLNHLSSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYGGGVEKLSYDGR 1746
FRGRAYPMHPHLNHLSSDLCRG+LEFAEGRPLGKSGLRWLKIHLANLY GGVEKLSY+GR
Sbjct: 556 FRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLRWLKIHLANLYAGGVEKLSYEGR 615
Query: 1747 ISFVENYIAEIFDSADNSLNGNRWWLKAEDPFQCLAACINLSEALRSSSPHTVVSHLPIH 1926
++FV+N+I +IFDSA N +NGNRWWL AEDP QCLAACINLSEAL S SPHTV+SHLPIH
Sbjct: 616 LAFVDNHIDDIFDSATNPVNGNRWWLTAEDPLQCLAACINLSEALNSPSPHTVISHLPIH 675
Query: 1927 QDGSCNGLQHYAALGRDSFEAAAVNLIAGDKPADVYSEIAERVHNIMKRDSEKDPATDPS 2106
QDGSCNGLQHYAALGRDS EAAAVNL+ GDKPADVYSEIA RVH IMKRDS KDP T P+
Sbjct: 676 QDGSCNGLQHYAALGRDSLEAAAVNLVDGDKPADVYSEIAARVHEIMKRDSNKDPTTSPN 735
Query: 2107 ALLAKLLIGQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGLITDDRLLFSAACYAA 2286
ALLA++L+ Q+DRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGLITDDRLLF+AACYAA
Sbjct: 736 ALLARILVNQIDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGLITDDRLLFTAACYAA 795
Query: 2287 KVTLAALGELFQAARAIMGWLGDCAKIIASENQPVRWTTPLGLPVVQPYFKTQRHVIRTS 2466
KVTLAALGE+FQAAR IM WLGDCAK+IASENQPVRWTTPLGLPVVQPY K++RH+IRTS
Sbjct: 796 KVTLAALGEIFQAARGIMSWLGDCAKVIASENQPVRWTTPLGLPVVQPYCKSERHLIRTS 855
Query: 2467 LQVLALQREGDSVEVRKQRTAFPPNFVHSLDGSHMMMTAIACRDGGLRFAGVHDSFWTHA 2646
LQVLALQRE +SV++RKQRTAFPPNFVHSLDGSHMMMTA+ACRD GLRFAGVHDSFWTH
Sbjct: 856 LQVLALQRESNSVDIRKQRTAFPPNFVHSLDGSHMMMTALACRDAGLRFAGVHDSFWTHP 915
Query: 2647 CDVDRMNQILRQKFVDLYNMPILESLLESFETSYPTLTFPPLPNRGDFDLNKVVQ 2811
CDVD+MN+ILR+KFV+LY+MPILESLLESF+ SYP LTFPPLP RGDFDL +V++
Sbjct: 916 CDVDQMNEILREKFVELYSMPILESLLESFQASYPALTFPPLPERGDFDLLQVLE 970
>ref|XP_008243031.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic [Prunus mume]
Length = 976
Score = 1357 bits (3512), Expect = 0.0
Identities = 663/895 (74%), Positives = 756/895 (84%), Gaps = 1/895 (0%)
Frame = +1
Query: 130 EKLLNLQVMPNGFRSSLTKESGDRVFIQDPPWISSLFMKSLLFRGRNRSGVKIEFKEMER 309
E +N Q+ + F +ESG R+FIQDPPWI+SLF+K + R +K+E KE+ER
Sbjct: 79 ENSMNFQIPMSEFHLITPQESGPRIFIQDPPWIASLFLKGIYKRANQE--LKLESKEIER 136
Query: 310 RKYYLLRRRQIKAETEAWXXXXXXXXXXXXXXXXXKLAPNLPHVKKLMLGWFEPLREAIE 489
R Y LLRRRQIKAETEAW KLAPNLP+VK L LGWFEPLREAI
Sbjct: 137 RNYNLLRRRQIKAETEAWERMVDEYKDLEKVMREKKLAPNLPYVKALFLGWFEPLREAIA 196
Query: 490 KEQNVQRSKKNKAAFAPYVDALPADKMAVIVMHKIMGLLMMGGKEDRCVRVVEAAVQIGV 669
+EQ Q++KK+KAAFAP++D LPADKMA+IVMHK+MGL+M+G +D CV+VV+AAV IG+
Sbjct: 197 REQKTQQTKKHKAAFAPHIDLLPADKMALIVMHKMMGLVMVGN-QDGCVQVVQAAVHIGM 255
Query: 670 AIEHEVRIHSFLERTKKHQRMEVGAESQEDSIKEAAILRKRVKSLIKRNRVIEVQKLVRS 849
AIE EVRIHSFLE+TK Q+ + G ++ KE ILRKRV LI+R R+ EVQKL+
Sbjct: 256 AIEQEVRIHSFLEKTKNLQKKKTGVADEDGLSKEKEILRKRVNGLIRRKRLNEVQKLLIK 315
Query: 850 EEFKSWGRDTQAKLGCCLIQLLTQSAYVQPPVNQSADSPPDVRPAFRHIFKIATRESGQS 1029
EE K WGRD QAKLG LI+LLT++AYVQPP++Q A+SPPDVRPAFRH FK + GQ
Sbjct: 316 EEMKPWGRDKQAKLGSRLIELLTETAYVQPPLSQLAESPPDVRPAFRHRFKAVAKSPGQK 375
Query: 1030 LVKKYGVIECDPLVLAGLDKTVKHMIIPYVPMLVPPKKWRGYDKGGYLFLPSYLMRTHGS 1209
+VK YGVIECDPLVL GLDKT KHM+IPYVPMLVPPK+W+GYDKGG+LFLPSY+MRTHGS
Sbjct: 376 IVKNYGVIECDPLVLTGLDKTAKHMLIPYVPMLVPPKRWKGYDKGGHLFLPSYVMRTHGS 435
Query: 1210 RQQQDAVKAVPTKQMQKVYEALDTLGNTKWRVNKRILSVVESIWAAGGNLAGLVNREDVP 1389
R+Q DA++ + QMQKV+EALD LG+TKWRVNK++LSVVESIWA GGN+AGLVNREDVP
Sbjct: 436 RKQVDAMRNISRNQMQKVFEALDMLGSTKWRVNKKVLSVVESIWARGGNIAGLVNREDVP 495
Query: 1390 IPELL-SDDXXXXXXXXXXXXXXXXINQERHSQRCDTELKLSVARKMKDEEGFYYPHNLD 1566
+P+ S+D INQERHS RCDTELKLSVARKMKDEEGFYYPHNLD
Sbjct: 496 VPDKSPSEDLKEIQEWKWSVRKAKKINQERHSLRCDTELKLSVARKMKDEEGFYYPHNLD 555
Query: 1567 FRGRAYPMHPHLNHLSSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYGGGVEKLSYDGR 1746
FRGRAYPMHPHLNHLSSDLCRG+LEFAEGRPLGKSGLRWLKIHLANLY GGVEKLSY+GR
Sbjct: 556 FRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLRWLKIHLANLYAGGVEKLSYEGR 615
Query: 1747 ISFVENYIAEIFDSADNSLNGNRWWLKAEDPFQCLAACINLSEALRSSSPHTVVSHLPIH 1926
++FV+N+I +IFDSA N +NGNRWWL AEDP QCLAACINLSEAL S SPHTV+SHLPIH
Sbjct: 616 LAFVDNHIDDIFDSATNPVNGNRWWLTAEDPLQCLAACINLSEALNSPSPHTVISHLPIH 675
Query: 1927 QDGSCNGLQHYAALGRDSFEAAAVNLIAGDKPADVYSEIAERVHNIMKRDSEKDPATDPS 2106
QDGSCNGLQHYAALGRDS EAAAVNL+ GDKPADVYSEIA RVH IMKRDS KDP T P+
Sbjct: 676 QDGSCNGLQHYAALGRDSLEAAAVNLVDGDKPADVYSEIAARVHEIMKRDSNKDPTTSPN 735
Query: 2107 ALLAKLLIGQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGLITDDRLLFSAACYAA 2286
ALLA++L+ Q+DRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGLITDDRLLF+AACYAA
Sbjct: 736 ALLARILVNQIDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGLITDDRLLFTAACYAA 795
Query: 2287 KVTLAALGELFQAARAIMGWLGDCAKIIASENQPVRWTTPLGLPVVQPYFKTQRHVIRTS 2466
KVTLAALGE+FQAAR IM WLGDCAK+IASENQPVRWTTPLGLPVVQPY K++RH+IRTS
Sbjct: 796 KVTLAALGEIFQAARGIMSWLGDCAKVIASENQPVRWTTPLGLPVVQPYCKSERHLIRTS 855
Query: 2467 LQVLALQREGDSVEVRKQRTAFPPNFVHSLDGSHMMMTAIACRDGGLRFAGVHDSFWTHA 2646
LQVLALQRE +SV++RKQRTAFPPNFVHSLDGSHMMMTA+ACRD GLRFAGVHDSFWTH
Sbjct: 856 LQVLALQRESNSVDIRKQRTAFPPNFVHSLDGSHMMMTALACRDAGLRFAGVHDSFWTHP 915
Query: 2647 CDVDRMNQILRQKFVDLYNMPILESLLESFETSYPTLTFPPLPNRGDFDLNKVVQ 2811
CDVD+MN+ILR+KFV+LY+MPILESLLESF+ SYP LTFPPLP RGDFDL +V++
Sbjct: 916 CDVDQMNEILREKFVELYSMPILESLLESFQASYPALTFPPLPERGDFDLLQVLE 970
>ref|XP_011018068.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic [Populus
euphratica]
Length = 983
Score = 1352 bits (3499), Expect = 0.0
Identities = 664/876 (75%), Positives = 753/876 (85%), Gaps = 1/876 (0%)
Frame = +1
Query: 187 ESGDRVFIQDPPWISSLFMKSLLFRGRNRSGVKIEFKEMERRKYYLLRRRQIKAETEAWX 366
ES RVFIQDPPWIS+ F K + ++ N+ VK+EFK++E+RKY LLRRRQI+ ETEAW
Sbjct: 105 ESSKRVFIQDPPWISAHFWKGV-YKIANKK-VKVEFKDIEKRKYNLLRRRQIREETEAWE 162
Query: 367 XXXXXXXXXXXXXXXXKLAPNLPHVKKLMLGWFEPLREAIEKEQNVQRSKKNKAAFAPYV 546
KLAPNLP+VK L+LGWFEPL+EAIEKEQ +++SKK K+AF+P +
Sbjct: 163 RMADEYRGLVREMCERKLAPNLPYVKGLLLGWFEPLKEAIEKEQKMEKSKKQKSAFSPNI 222
Query: 547 DALPADKMAVIVMHKIMGLLMMGGKEDRCVRVVEAAVQIGVAIEHEVRIHSFLERTKKHQ 726
+ LPADKMAVIVMHK+MGLLM+G ED CVRVV+AAVQIG+AIE EVRIH+FLE+TK HQ
Sbjct: 223 ELLPADKMAVIVMHKMMGLLMVG-HEDGCVRVVQAAVQIGMAIEQEVRIHNFLEKTKNHQ 281
Query: 727 RMEVGAESQEDSIKEAAILRKRVKSLIKRNRVIEVQKLVRSEEFKSWGRDTQAKLGCCLI 906
R + + QE KE +LRKRV SLI+R R++EVQ LV+ +E K W R TQAKLG LI
Sbjct: 282 RKKTMHDVQESMDKEKEMLRKRVNSLIRRKRLMEVQNLVKQDETKPWSRGTQAKLGSRLI 341
Query: 907 QLLTQSAYVQPPVNQSADSPPDVRPAFRHIFKIATRESGQSLVKKYGVIECDPLVLAGLD 1086
+LLT++AYVQPPVNQS D PPDVRPAFRHIFK T+ GQ +VKKYGVIECDPL+L GLD
Sbjct: 342 ELLTETAYVQPPVNQSEDIPPDVRPAFRHIFKTLTKNPGQKIVKKYGVIECDPLILTGLD 401
Query: 1087 KTVKHMIIPYVPMLVPPKKWRGYDKGGYLFLPSYLMRTHGSRQQQDAVKAVPTKQMQKVY 1266
T KHM+IPY PMLVPPKKW+GYDKGG+LFLPSY+MRTHGSRQQQ AV++VP KQMQKV+
Sbjct: 402 GTAKHMLIPYFPMLVPPKKWKGYDKGGHLFLPSYIMRTHGSRQQQVAVRSVPGKQMQKVF 461
Query: 1267 EALDTLGNTKWRVNKRILSVVESIWAAGGNLAGLVNREDVPIPEL-LSDDXXXXXXXXXX 1443
EALDTLGNTKWRVN+R+L VVE IW +GGN+AGLV+RED+PIPE SDD
Sbjct: 462 EALDTLGNTKWRVNRRLLDVVERIWTSGGNIAGLVDREDIPIPEKPSSDDLTEIQKWKWS 521
Query: 1444 XXXXXXINQERHSQRCDTELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDL 1623
INQERHSQRCDTELKLSVARK+KDEEGFYYPHNLDFRGRAYPMHPHL HLSSDL
Sbjct: 522 VRKAKKINQERHSQRCDTELKLSVARKLKDEEGFYYPHNLDFRGRAYPMHPHLTHLSSDL 581
Query: 1624 CRGILEFAEGRPLGKSGLRWLKIHLANLYGGGVEKLSYDGRISFVENYIAEIFDSADNSL 1803
CRG+LEF EGRPLGKSGLRWLKIHLANLY GGVEKLS+DGR++FVEN+++EIFDSA N +
Sbjct: 582 CRGVLEFEEGRPLGKSGLRWLKIHLANLYSGGVEKLSHDGRLAFVENHLSEIFDSAKNPV 641
Query: 1804 NGNRWWLKAEDPFQCLAACINLSEALRSSSPHTVVSHLPIHQDGSCNGLQHYAALGRDSF 1983
NG RWWLKAEDPFQCLAACINLSEAL S+SPHTV+SHLPIHQDGSCNGLQHYAALGRDS
Sbjct: 642 NGKRWWLKAEDPFQCLAACINLSEALNSASPHTVISHLPIHQDGSCNGLQHYAALGRDSL 701
Query: 1984 EAAAVNLIAGDKPADVYSEIAERVHNIMKRDSEKDPATDPSALLAKLLIGQVDRKLVKQT 2163
EAAAVNL+A +KP+DVYSEIA RVH I++RDS KDPAT+P ALLAK+L+ QVDRKLVKQT
Sbjct: 702 EAAAVNLVAAEKPSDVYSEIAVRVHEIIRRDSNKDPATNPHALLAKILVDQVDRKLVKQT 761
Query: 2164 VMTSVYGVTYVGAREQIKRRLEEKGLITDDRLLFSAACYAAKVTLAALGELFQAARAIMG 2343
VMTSVYGVTYVGAREQIKRRLEEKG ITDDRLLFSAACY AKVTL ALGELFQAAR IM
Sbjct: 762 VMTSVYGVTYVGAREQIKRRLEEKGHITDDRLLFSAACYTAKVTLTALGELFQAARDIMS 821
Query: 2344 WLGDCAKIIASENQPVRWTTPLGLPVVQPYFKTQRHVIRTSLQVLALQREGDSVEVRKQR 2523
WLGDCAKIIASE+QPV+WTTPLGLPVVQPY+K +RH+I+TSLQ+LALQREG SV+VRKQR
Sbjct: 822 WLGDCAKIIASEDQPVQWTTPLGLPVVQPYYKRERHLIKTSLQILALQREGSSVQVRKQR 881
Query: 2524 TAFPPNFVHSLDGSHMMMTAIACRDGGLRFAGVHDSFWTHACDVDRMNQILRQKFVDLYN 2703
TAFPPNFVHSLDGSHMMMTA+ACRD GL FAGVHDSFWTHA DVD MN+ILR+KFV+LYN
Sbjct: 882 TAFPPNFVHSLDGSHMMMTAVACRDAGLCFAGVHDSFWTHARDVDLMNRILREKFVELYN 941
Query: 2704 MPILESLLESFETSYPTLTFPPLPNRGDFDLNKVVQ 2811
MPILE+LLE F+TSYPTL FPPLP RG+FDL KV++
Sbjct: 942 MPILENLLEDFQTSYPTLKFPPLPERGNFDLQKVLR 977
>ref|XP_002325119.1| DNA-directed RNA polymerase family protein [Populus trichocarpa]
gi|222866553|gb|EEF03684.1| DNA-directed RNA polymerase
family protein [Populus trichocarpa]
Length = 882
Score = 1352 bits (3499), Expect = 0.0
Identities = 663/876 (75%), Positives = 754/876 (86%), Gaps = 1/876 (0%)
Frame = +1
Query: 187 ESGDRVFIQDPPWISSLFMKSLLFRGRNRSGVKIEFKEMERRKYYLLRRRQIKAETEAWX 366
ES +VFIQDPPWIS+ F K + ++ N+ VK+EFK++E+RKY LLRRRQI+ ETEAW
Sbjct: 4 ESSKKVFIQDPPWISAHFWKGM-YKLANKK-VKVEFKDIEKRKYNLLRRRQIREETEAWE 61
Query: 367 XXXXXXXXXXXXXXXXKLAPNLPHVKKLMLGWFEPLREAIEKEQNVQRSKKNKAAFAPYV 546
KLAPNLP+VK L+LGWFEPL+EAIEKEQ +++SKK K+AF+P +
Sbjct: 62 RMADEYRGLVREMCERKLAPNLPYVKGLLLGWFEPLKEAIEKEQKMEKSKKQKSAFSPNI 121
Query: 547 DALPADKMAVIVMHKIMGLLMMGGKEDRCVRVVEAAVQIGVAIEHEVRIHSFLERTKKHQ 726
+ LPADKMAVIVMHK+MGLLM+G ED CVRVV+AAVQIG+AIE EVRIH+FLE+TK +Q
Sbjct: 122 ELLPADKMAVIVMHKMMGLLMVG-HEDGCVRVVQAAVQIGMAIEQEVRIHNFLEKTKNYQ 180
Query: 727 RMEVGAESQEDSIKEAAILRKRVKSLIKRNRVIEVQKLVRSEEFKSWGRDTQAKLGCCLI 906
R + E QE KE +LRKRV SLI+R R++EVQ LV+ +E K W R TQAKLG LI
Sbjct: 181 RKKTMHEVQETMDKEKEVLRKRVNSLIRRKRLMEVQNLVKQDETKPWSRGTQAKLGSRLI 240
Query: 907 QLLTQSAYVQPPVNQSADSPPDVRPAFRHIFKIATRESGQSLVKKYGVIECDPLVLAGLD 1086
+LLT++AYVQPPVNQS D PPDVRPAFRHIFK T+ GQ +VKKYGVIECDPL+L GLD
Sbjct: 241 ELLTETAYVQPPVNQSEDIPPDVRPAFRHIFKTLTKNPGQKIVKKYGVIECDPLILTGLD 300
Query: 1087 KTVKHMIIPYVPMLVPPKKWRGYDKGGYLFLPSYLMRTHGSRQQQDAVKAVPTKQMQKVY 1266
T KHM+IPY PMLVPPKKW+GYDKGG+LFLPSY+MRTHGSRQQQ AV++VP KQMQKV+
Sbjct: 301 GTAKHMLIPYFPMLVPPKKWKGYDKGGHLFLPSYVMRTHGSRQQQVAVRSVPGKQMQKVF 360
Query: 1267 EALDTLGNTKWRVNKRILSVVESIWAAGGNLAGLVNREDVPIPEL-LSDDXXXXXXXXXX 1443
EALDTLGNTKWRVN+R+L VVE IW +GGN+AGLV+RED+PIPE SDD
Sbjct: 361 EALDTLGNTKWRVNRRLLDVVERIWTSGGNIAGLVDREDIPIPEKPSSDDLTEIQKWKWS 420
Query: 1444 XXXXXXINQERHSQRCDTELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDL 1623
INQERHSQRCDTELKLSVARK+KDEEGFYYPHNLDFRGRAYPMHPHL HLSSDL
Sbjct: 421 VRKAKKINQERHSQRCDTELKLSVARKLKDEEGFYYPHNLDFRGRAYPMHPHLTHLSSDL 480
Query: 1624 CRGILEFAEGRPLGKSGLRWLKIHLANLYGGGVEKLSYDGRISFVENYIAEIFDSADNSL 1803
CRG+LEF EGRPLGKSGLRWLKIHLANLY GGVEKLS+DGR++FVEN+++EIFDSA N +
Sbjct: 481 CRGVLEFEEGRPLGKSGLRWLKIHLANLYSGGVEKLSHDGRLAFVENHLSEIFDSAKNPV 540
Query: 1804 NGNRWWLKAEDPFQCLAACINLSEALRSSSPHTVVSHLPIHQDGSCNGLQHYAALGRDSF 1983
NG RWWLKAEDPFQCLAACINLSEAL S+SPHTV+SHLPIHQDGSCNGLQHYAALGRD+
Sbjct: 541 NGKRWWLKAEDPFQCLAACINLSEALNSASPHTVISHLPIHQDGSCNGLQHYAALGRDTL 600
Query: 1984 EAAAVNLIAGDKPADVYSEIAERVHNIMKRDSEKDPATDPSALLAKLLIGQVDRKLVKQT 2163
EAAAVNL+A +KP+DVYSEIA RVH I++RDS KDPAT+P ALLAK+L+ QVDRKLVKQT
Sbjct: 601 EAAAVNLVAAEKPSDVYSEIAVRVHEIIRRDSNKDPATNPHALLAKILVDQVDRKLVKQT 660
Query: 2164 VMTSVYGVTYVGAREQIKRRLEEKGLITDDRLLFSAACYAAKVTLAALGELFQAARAIMG 2343
VMTSVYGVTYVGAREQIKRRLEEKG ITDDRLLFSAACY AKVTL ALGELFQAAR IM
Sbjct: 661 VMTSVYGVTYVGAREQIKRRLEEKGHITDDRLLFSAACYTAKVTLTALGELFQAARDIMS 720
Query: 2344 WLGDCAKIIASENQPVRWTTPLGLPVVQPYFKTQRHVIRTSLQVLALQREGDSVEVRKQR 2523
WLGDCAKIIASE+QPV+WTTPLGLPVVQPY+KT+RH+I+TSLQ+LALQREG SV+VRKQR
Sbjct: 721 WLGDCAKIIASEDQPVQWTTPLGLPVVQPYYKTERHLIKTSLQILALQREGSSVQVRKQR 780
Query: 2524 TAFPPNFVHSLDGSHMMMTAIACRDGGLRFAGVHDSFWTHACDVDRMNQILRQKFVDLYN 2703
TAFPPNFVHSLDGSHMMMTA+ACRD GL FAGVHDSFWTHA DVD MN+ILR+KFV+LYN
Sbjct: 781 TAFPPNFVHSLDGSHMMMTAVACRDAGLCFAGVHDSFWTHATDVDLMNRILREKFVELYN 840
Query: 2704 MPILESLLESFETSYPTLTFPPLPNRGDFDLNKVVQ 2811
MPILE+LLE F+TSYPTL FPPLP RG+FDL KV++
Sbjct: 841 MPILENLLEDFQTSYPTLQFPPLPERGNFDLQKVLR 876
>ref|XP_012445978.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic [Gossypium
raimondii] gi|763786877|gb|KJB53873.1| hypothetical
protein B456_009G009300 [Gossypium raimondii]
Length = 972
Score = 1352 bits (3498), Expect = 0.0
Identities = 669/901 (74%), Positives = 776/901 (86%), Gaps = 4/901 (0%)
Frame = +1
Query: 121 ENPEKLLNLQVMPNGF-RSSLTKESGDRVFIQDPPWISSLFMKSLLFRGRNRSGVKIEFK 297
ENP+KLL +PN R L+ ES R+FIQDPPWIS+LF K L ++ N++ VKIE K
Sbjct: 74 ENPKKLL----LPNAHSRQILSPESAPRIFIQDPPWISALFWKGL-YKMTNQT-VKIEHK 127
Query: 298 EMERRKYYLLRRRQIKAETEAWXXXXXXXXXXXXXXXXXKLAPNLPHVKKLMLGWFEPLR 477
E+E+RKY LLRRRQ+K ETEAW KLAPNLP+VK L LGWFEPLR
Sbjct: 128 EIEKRKYNLLRRRQVKEETEAWEKMVEEYRELEREMCEKKLAPNLPYVKGLFLGWFEPLR 187
Query: 478 EAIEKEQNVQRSKKNK--AAFAPYVDALPADKMAVIVMHKIMGLLMMGGKEDRCVRVVEA 651
EAI KEQ VQ+ K K AA+AP+++ LPADK+AVIVMHK+MGL+M G +ED V+VV+A
Sbjct: 188 EAIAKEQKVQKGKNKKLRAAYAPHIELLPADKLAVIVMHKMMGLVM-GAEEDGYVQVVQA 246
Query: 652 AVQIGVAIEHEVRIHSFLERTKKHQRMEVGAESQEDSIKEAAILRKRVKSLIKRNRVIEV 831
AV IGVAIE EVRIHSFLE+TK +QR ++ E Q S KE ILRKRV SLI+R R+ EV
Sbjct: 247 AVHIGVAIEQEVRIHSFLEKTKNYQRKQIVDEVQGAS-KEKEILRKRVNSLIRRRRLTEV 305
Query: 832 QKLVRSEEFKSWGRDTQAKLGCCLIQLLTQSAYVQPPVNQSADSPPDVRPAFRHIFKIAT 1011
QKLV++EE K WGRD QAKLG L++LLT++AYVQPP++QS DSP DVRPAFRH FK +
Sbjct: 306 QKLVKNEEIKPWGRDAQAKLGSRLLELLTETAYVQPPIDQSGDSPLDVRPAFRHKFKTIS 365
Query: 1012 RESGQSLVKKYGVIECDPLVLAGLDKTVKHMIIPYVPMLVPPKKWRGYDKGGYLFLPSYL 1191
R GQ + K+YGVIECDPL+ +GLDK+ KHM+IPYVPMLVPPKKW+GYDKGGYLFLPSY+
Sbjct: 366 RGPGQKIKKRYGVIECDPLIRSGLDKSAKHMMIPYVPMLVPPKKWKGYDKGGYLFLPSYV 425
Query: 1192 MRTHGSRQQQDAVKAVPTKQMQKVYEALDTLGNTKWRVNKRILSVVESIWAAGGNLAGLV 1371
MRTHGSR+QQ+A+K V K M+KV+EALDTLG+TKWRVN ++L+VVESIWA+GGN+AGLV
Sbjct: 426 MRTHGSRKQQEALKGVNVKNMRKVFEALDTLGSTKWRVNNKVLAVVESIWASGGNIAGLV 485
Query: 1372 NREDVPIPEL-LSDDXXXXXXXXXXXXXXXXINQERHSQRCDTELKLSVARKMKDEEGFY 1548
+R D+PIPE S+D +N+ERHSQRCDTELKLSVARKM++EEGFY
Sbjct: 486 DRNDIPIPEKPYSEDSTEIQEWKWSVRKANKVNRERHSQRCDTELKLSVARKMENEEGFY 545
Query: 1549 YPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYGGGVEK 1728
YPHNLDFRGRAYPMHPHLNHLSSDLCRG+LEFAEGRPLG+SGL WLKIHLANLY GGVEK
Sbjct: 546 YPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGRSGLHWLKIHLANLYSGGVEK 605
Query: 1729 LSYDGRISFVENYIAEIFDSADNSLNGNRWWLKAEDPFQCLAACINLSEALRSSSPHTVV 1908
LS+DGR++FV+N++ EIFDSA+N +NGNRWWL AEDPFQCLAAC+NLSEAL+S+SPH+++
Sbjct: 606 LSHDGRLAFVDNHLDEIFDSAENPINGNRWWLTAEDPFQCLAACMNLSEALKSTSPHSMI 665
Query: 1909 SHLPIHQDGSCNGLQHYAALGRDSFEAAAVNLIAGDKPADVYSEIAERVHNIMKRDSEKD 2088
S+LPIHQDGSCNGLQHYAALGRD+ EAAAVNL+AG+KPADVYSEIA RVHNIMKRDS KD
Sbjct: 666 SYLPIHQDGSCNGLQHYAALGRDNLEAAAVNLVAGEKPADVYSEIAVRVHNIMKRDSNKD 725
Query: 2089 PATDPSALLAKLLIGQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGLITDDRLLFS 2268
PAT+P+ALLAKLLI QVDRKLVKQTVMTSVYGVT+VGAREQIKRRLEEKG ITDDRLLFS
Sbjct: 726 PATNPNALLAKLLIDQVDRKLVKQTVMTSVYGVTFVGAREQIKRRLEEKGHITDDRLLFS 785
Query: 2269 AACYAAKVTLAALGELFQAARAIMGWLGDCAKIIASENQPVRWTTPLGLPVVQPYFKTQR 2448
AACY AKVTLAALGELFQAAR IMGWLGDCAK+IASENQPVRWTTPLGLPVVQPY+K++R
Sbjct: 786 AACYTAKVTLAALGELFQAARNIMGWLGDCAKVIASENQPVRWTTPLGLPVVQPYYKSER 845
Query: 2449 HVIRTSLQVLALQREGDSVEVRKQRTAFPPNFVHSLDGSHMMMTAIACRDGGLRFAGVHD 2628
H+IRT+LQVLALQREG+SVEVRKQRTAFPPNFVHSLDGSHMMMTA+ACRD GL FAGVHD
Sbjct: 846 HLIRTTLQVLALQREGNSVEVRKQRTAFPPNFVHSLDGSHMMMTAVACRDAGLYFAGVHD 905
Query: 2629 SFWTHACDVDRMNQILRQKFVDLYNMPILESLLESFETSYPTLTFPPLPNRGDFDLNKVV 2808
SFWTHACDV++MNQILR+KFV+LY+MP+LE+LLESFETSYPTL FPPLP RG+FDL +V+
Sbjct: 906 SFWTHACDVEKMNQILREKFVELYSMPVLENLLESFETSYPTLVFPPLPERGNFDLREVL 965
Query: 2809 Q 2811
+
Sbjct: 966 K 966
>gb|KJB53874.1| hypothetical protein B456_009G009300 [Gossypium raimondii]
Length = 972
Score = 1350 bits (3495), Expect = 0.0
Identities = 669/900 (74%), Positives = 774/900 (86%), Gaps = 4/900 (0%)
Frame = +1
Query: 121 ENPEKLLNLQVMPNGF-RSSLTKESGDRVFIQDPPWISSLFMKSLLFRGRNRSGVKIEFK 297
ENP+KLL +PN R L+ ES R+FIQDPPWIS+LF K L ++ N++ VKIE K
Sbjct: 74 ENPKKLL----LPNAHSRQILSPESAPRIFIQDPPWISALFWKGL-YKMTNQT-VKIEHK 127
Query: 298 EMERRKYYLLRRRQIKAETEAWXXXXXXXXXXXXXXXXXKLAPNLPHVKKLMLGWFEPLR 477
E+E+RKY LLRRRQ+K ETEAW KLAPNLP+VK L LGWFEPLR
Sbjct: 128 EIEKRKYNLLRRRQVKEETEAWEKMVEEYRELEREMCEKKLAPNLPYVKGLFLGWFEPLR 187
Query: 478 EAIEKEQNVQRSKKNK--AAFAPYVDALPADKMAVIVMHKIMGLLMMGGKEDRCVRVVEA 651
EAI KEQ VQ+ K K AA+AP+++ LPADK+AVIVMHK+MGL+M G +ED V+VV+A
Sbjct: 188 EAIAKEQKVQKGKNKKLRAAYAPHIELLPADKLAVIVMHKMMGLVM-GAEEDGYVQVVQA 246
Query: 652 AVQIGVAIEHEVRIHSFLERTKKHQRMEVGAESQEDSIKEAAILRKRVKSLIKRNRVIEV 831
AV IGVAIE EVRIHSFLE+TK +QR ++ E Q S KE ILRKRV SLI+R R+ EV
Sbjct: 247 AVHIGVAIEQEVRIHSFLEKTKNYQRKQIVDEVQGAS-KEKEILRKRVNSLIRRRRLTEV 305
Query: 832 QKLVRSEEFKSWGRDTQAKLGCCLIQLLTQSAYVQPPVNQSADSPPDVRPAFRHIFKIAT 1011
QKLV++EE K WGRD QAKLG L++LLT++AYVQPP++QS DSP DVRPAFRH FK +
Sbjct: 306 QKLVKNEEIKPWGRDAQAKLGSRLLELLTETAYVQPPIDQSGDSPLDVRPAFRHKFKTIS 365
Query: 1012 RESGQSLVKKYGVIECDPLVLAGLDKTVKHMIIPYVPMLVPPKKWRGYDKGGYLFLPSYL 1191
R GQ + K+YGVIECDPL+ +GLDK+ KHM+IPYVPMLVPPKKW+GYDKGGYLFLPSY+
Sbjct: 366 RGPGQKIKKRYGVIECDPLIRSGLDKSAKHMMIPYVPMLVPPKKWKGYDKGGYLFLPSYV 425
Query: 1192 MRTHGSRQQQDAVKAVPTKQMQKVYEALDTLGNTKWRVNKRILSVVESIWAAGGNLAGLV 1371
MRTHGSR+QQ+A+K V K M+KV+EALDTLG+TKWRVN ++L+VVESIWA+GGN+AGLV
Sbjct: 426 MRTHGSRKQQEALKGVNVKNMRKVFEALDTLGSTKWRVNNKVLAVVESIWASGGNIAGLV 485
Query: 1372 NREDVPIPEL-LSDDXXXXXXXXXXXXXXXXINQERHSQRCDTELKLSVARKMKDEEGFY 1548
+R D+PIPE S+D +N+ERHSQRCDTELKLSVARKM++EEGFY
Sbjct: 486 DRNDIPIPEKPYSEDSTEIQEWKWSVRKANKVNRERHSQRCDTELKLSVARKMENEEGFY 545
Query: 1549 YPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYGGGVEK 1728
YPHNLDFRGRAYPMHPHLNHLSSDLCRG+LEFAEGRPLG+SGL WLKIHLANLY GGVEK
Sbjct: 546 YPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGRSGLHWLKIHLANLYSGGVEK 605
Query: 1729 LSYDGRISFVENYIAEIFDSADNSLNGNRWWLKAEDPFQCLAACINLSEALRSSSPHTVV 1908
LS+DGR++FV+N++ EIFDSA+N +NGNRWWL AEDPFQCLAAC+NLSEAL+S+SPH+++
Sbjct: 606 LSHDGRLAFVDNHLDEIFDSAENPINGNRWWLTAEDPFQCLAACMNLSEALKSTSPHSMI 665
Query: 1909 SHLPIHQDGSCNGLQHYAALGRDSFEAAAVNLIAGDKPADVYSEIAERVHNIMKRDSEKD 2088
S+LPIHQDGSCNGLQHYAALGRD+ EAAAVNL+AG+KPADVYSEIA RVHNIMKRDS KD
Sbjct: 666 SYLPIHQDGSCNGLQHYAALGRDNLEAAAVNLVAGEKPADVYSEIAVRVHNIMKRDSNKD 725
Query: 2089 PATDPSALLAKLLIGQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGLITDDRLLFS 2268
PAT+P+ALLAKLLI QVDRKLVKQTVMTSVYGVT+VGAREQIKRRLEEKG ITDDRLLFS
Sbjct: 726 PATNPNALLAKLLIDQVDRKLVKQTVMTSVYGVTFVGAREQIKRRLEEKGHITDDRLLFS 785
Query: 2269 AACYAAKVTLAALGELFQAARAIMGWLGDCAKIIASENQPVRWTTPLGLPVVQPYFKTQR 2448
AACY AKVTLAALGELFQAAR IMGWLGDCAK+IASENQPVRWTTPLGLPVVQPY+K++R
Sbjct: 786 AACYTAKVTLAALGELFQAARNIMGWLGDCAKVIASENQPVRWTTPLGLPVVQPYYKSER 845
Query: 2449 HVIRTSLQVLALQREGDSVEVRKQRTAFPPNFVHSLDGSHMMMTAIACRDGGLRFAGVHD 2628
H+IRT+LQVLALQREG+SVEVRKQRTAFPPNFVHSLDGSHMMMTA+ACRD GL FAGVHD
Sbjct: 846 HLIRTTLQVLALQREGNSVEVRKQRTAFPPNFVHSLDGSHMMMTAVACRDAGLYFAGVHD 905
Query: 2629 SFWTHACDVDRMNQILRQKFVDLYNMPILESLLESFETSYPTLTFPPLPNRGDFDLNKVV 2808
SFWTHACDV++MNQILR+KFV+LY+MP+LE+LLESFETSYPTL FPPLP RG+FDL V+
Sbjct: 906 SFWTHACDVEKMNQILREKFVELYSMPVLENLLESFETSYPTLVFPPLPERGNFDLQTVL 965
>ref|XP_009366215.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic [Pyrus x
bretschneideri]
Length = 972
Score = 1347 bits (3486), Expect = 0.0
Identities = 659/895 (73%), Positives = 754/895 (84%), Gaps = 1/895 (0%)
Frame = +1
Query: 130 EKLLNLQVMPNGFRSSLTKESGDRVFIQDPPWISSLFMKSLLFRGRNRSGVKIEFKEMER 309
E +NLQ+ F ES R+FIQDPPWI++LF+K + + +K+E KE++R
Sbjct: 75 ENSMNLQLPIREFHLITPDESAPRIFIQDPPWIAALFLKGMYKKANQE--LKLESKEIDR 132
Query: 310 RKYYLLRRRQIKAETEAWXXXXXXXXXXXXXXXXXKLAPNLPHVKKLMLGWFEPLREAIE 489
RKY LLRRRQIKAETEAW KLAP+LP+VK L LGWFEPLREAI
Sbjct: 133 RKYNLLRRRQIKAETEAWERMVEEYKDLERVMREKKLAPSLPYVKTLFLGWFEPLREAIA 192
Query: 490 KEQNVQRSKKNKAAFAPYVDALPADKMAVIVMHKIMGLLMMGGKEDRCVRVVEAAVQIGV 669
+EQ VQ++KK+KAAFAP++D LP DKMA+IVMHK+MGL+M+G +D CV+VV+AAV IG+
Sbjct: 193 REQQVQQTKKHKAAFAPHIDLLPPDKMALIVMHKMMGLVMVGN-QDGCVQVVQAAVHIGM 251
Query: 670 AIEHEVRIHSFLERTKKHQRMEVGAESQEDSIKEAAILRKRVKSLIKRNRVIEVQKLVRS 849
AIE EVRIHSFLE+TK QR + ++ IKE ILRKRV LIKR R+ EVQKL+
Sbjct: 252 AIEQEVRIHSFLEKTKNFQRKKTAVADEDSLIKEKEILRKRVNVLIKRKRLREVQKLLVK 311
Query: 850 EEFKSWGRDTQAKLGCCLIQLLTQSAYVQPPVNQSADSPPDVRPAFRHIFKIATRESGQS 1029
EEFK WGRDTQAKLG LI+LLT++AYVQPP+NQ AD PPDVRPAFRH FK A + GQ
Sbjct: 312 EEFKPWGRDTQAKLGSRLIELLTETAYVQPPLNQLADGPPDVRPAFRHRFKAAAKTPGQK 371
Query: 1030 LVKKYGVIECDPLVLAGLDKTVKHMIIPYVPMLVPPKKWRGYDKGGYLFLPSYLMRTHGS 1209
LVK YGVIECDPLVL GLDKT KHM+IPYVPMLVPP+KW+GYDKGG+LFLPSY+MRTHGS
Sbjct: 372 LVKNYGVIECDPLVLTGLDKTAKHMLIPYVPMLVPPRKWKGYDKGGHLFLPSYVMRTHGS 431
Query: 1210 RQQQDAVKAVPTKQMQKVYEALDTLGNTKWRVNKRILSVVESIWAAGGNLAGLVNREDVP 1389
R+Q D ++ + KQMQKV+EALD LG+TKWRVNK++L+VVESIWA GGN+AGLV+REDVP
Sbjct: 432 RKQVDTMRNISGKQMQKVFEALDMLGSTKWRVNKKVLNVVESIWARGGNIAGLVDREDVP 491
Query: 1390 IPELLS-DDXXXXXXXXXXXXXXXXINQERHSQRCDTELKLSVARKMKDEEGFYYPHNLD 1566
+P+ + INQERHS RCDTELKLSVARKMKDEEGFYYPHNLD
Sbjct: 492 VPDKPPLEGLTEIQEWKWSVRKAKKINQERHSLRCDTELKLSVARKMKDEEGFYYPHNLD 551
Query: 1567 FRGRAYPMHPHLNHLSSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYGGGVEKLSYDGR 1746
FRGRAYPMHPHLNHLSSDLCRG+LEFAEGRPLGKSGLRWLKIHLANLY GGVEKLSY+ R
Sbjct: 552 FRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLRWLKIHLANLYAGGVEKLSYEER 611
Query: 1747 ISFVENYIAEIFDSADNSLNGNRWWLKAEDPFQCLAACINLSEALRSSSPHTVVSHLPIH 1926
+FV+++I +IFDSA N +NGNRWWL AEDP QCLAACINLSEAL S SPHTV+SHLPIH
Sbjct: 612 HAFVDHHIDDIFDSATNPVNGNRWWLTAEDPLQCLAACINLSEALNSPSPHTVISHLPIH 671
Query: 1927 QDGSCNGLQHYAALGRDSFEAAAVNLIAGDKPADVYSEIAERVHNIMKRDSEKDPATDPS 2106
QDGSCNGLQHYAALGRDS EAAAVNL+AG+KPADVYSEIA RVH IM+RDS KDP T P+
Sbjct: 672 QDGSCNGLQHYAALGRDSLEAAAVNLVAGEKPADVYSEIAARVHEIMERDSNKDPTTSPN 731
Query: 2107 ALLAKLLIGQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGLITDDRLLFSAACYAA 2286
ALLA++L+ Q+DRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKG ITDDRLLF+AACYAA
Sbjct: 732 ALLARVLVNQIDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGFITDDRLLFTAACYAA 791
Query: 2287 KVTLAALGELFQAARAIMGWLGDCAKIIASENQPVRWTTPLGLPVVQPYFKTQRHVIRTS 2466
KVTLAALGE+FQAAR IMGWLGDCAK+IASENQPVRWTTPLGLPVVQPY K +RH+IRTS
Sbjct: 792 KVTLAALGEIFQAARGIMGWLGDCAKVIASENQPVRWTTPLGLPVVQPYCKNERHLIRTS 851
Query: 2467 LQVLALQREGDSVEVRKQRTAFPPNFVHSLDGSHMMMTAIACRDGGLRFAGVHDSFWTHA 2646
LQVLALQRE +S++VRKQRTAFPPNFVHSLDGSHMMMTA+ACRD GLRFAGVHDSFWTHA
Sbjct: 852 LQVLALQRESNSIDVRKQRTAFPPNFVHSLDGSHMMMTALACRDAGLRFAGVHDSFWTHA 911
Query: 2647 CDVDRMNQILRQKFVDLYNMPILESLLESFETSYPTLTFPPLPNRGDFDLNKVVQ 2811
CDVD+MN+ILR+KF++LY+MPILE+LLESF+ SYP LTFPPLP RGDFDL +V++
Sbjct: 912 CDVDQMNEILREKFIELYSMPILENLLESFQASYPALTFPPLPERGDFDLQEVLE 966
>ref|XP_007013877.1| DNA/RNA polymerases superfamily protein isoform 1 [Theobroma cacao]
gi|508784240|gb|EOY31496.1| DNA/RNA polymerases
superfamily protein isoform 1 [Theobroma cacao]
Length = 978
Score = 1344 bits (3478), Expect = 0.0
Identities = 660/903 (73%), Positives = 779/903 (86%), Gaps = 3/903 (0%)
Frame = +1
Query: 112 NFPENPEKLLNLQVMPNGFRSSLTKESGDRVFIQDPPWISSLFMKSLLFRGRNRSGVKIE 291
NF EN E N + L+ ES R+FIQDPPWIS+LF+K L ++ N++ VKIE
Sbjct: 74 NFVENIENPSNFLLPKAQSHQILSPESTPRLFIQDPPWISALFLKGL-YKMTNQT-VKIE 131
Query: 292 FKEMERRKYYLLRRRQIKAETEAWXXXXXXXXXXXXXXXXXKLAPNLPHVKKLMLGWFEP 471
KE+E+RKY LLRRRQ+K ETEAW KLAPNLP+VK L LGWFEP
Sbjct: 132 HKEIEKRKYNLLRRRQVKEETEAWEKMVEEYRELQREMCEKKLAPNLPYVKGLFLGWFEP 191
Query: 472 LREAIEKEQNVQR--SKKNKAAFAPYVDALPADKMAVIVMHKIMGLLMMGGKEDRCVRVV 645
+REAI +EQ VQ+ SKK +AA+AP+++ LPADKMAVIVMHK+MGL+M G +E+ V+VV
Sbjct: 192 MREAIAREQKVQKGKSKKLRAAYAPHIELLPADKMAVIVMHKMMGLVM-GAQENGFVQVV 250
Query: 646 EAAVQIGVAIEHEVRIHSFLERTKKHQRMEVGAESQEDSIKEAAILRKRVKSLIKRNRVI 825
+AAV IGVAIE EVRIH+FLE+TK +QR + E Q S KE IL+KRV SLI+R R++
Sbjct: 251 QAAVHIGVAIEQEVRIHNFLEKTKNYQRKKTTDEVQGLS-KEKEILKKRVNSLIRRRRLV 309
Query: 826 EVQKLVRSEEFKSWGRDTQAKLGCCLIQLLTQSAYVQPPVNQSADSPPDVRPAFRHIFKI 1005
EVQKLV++EE K WGRD QAKLG L++LLT++AYVQPP++QS DSPPDV+PAFRH FK
Sbjct: 310 EVQKLVKNEEIKPWGRDAQAKLGSRLLELLTETAYVQPPIDQSGDSPPDVQPAFRHKFKT 369
Query: 1006 ATRESGQSLVKKYGVIECDPLVLAGLDKTVKHMIIPYVPMLVPPKKWRGYDKGGYLFLPS 1185
+++ G+ ++K+YGVIECDPL+L+GLD++ KHM+IPYVPMLVPPKKW+GYDKGGYLFLPS
Sbjct: 370 ISKDPGKKMMKRYGVIECDPLILSGLDRSAKHMLIPYVPMLVPPKKWKGYDKGGYLFLPS 429
Query: 1186 YLMRTHGSRQQQDAVKAVPTKQMQKVYEALDTLGNTKWRVNKRILSVVESIWAAGGNLAG 1365
Y+MRTHGSR+QQDA+K V K+MQKV+EALDTLG+TKWRVNK++L+VVESIWA+GGN+AG
Sbjct: 430 YVMRTHGSRKQQDALKGVHVKKMQKVFEALDTLGSTKWRVNKKVLAVVESIWASGGNIAG 489
Query: 1366 LVNREDVPIPEL-LSDDXXXXXXXXXXXXXXXXINQERHSQRCDTELKLSVARKMKDEEG 1542
LV+R D+PIPE S+D IN+ERHSQRCDTELKLSVARKM++EEG
Sbjct: 490 LVDRNDIPIPEKPSSEDSTESQEWKWSVRKANKINRERHSQRCDTELKLSVARKMENEEG 549
Query: 1543 FYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYGGGV 1722
FYYPHNLDFRGRAYPMHPHLNHLSSDLCRG+LEFAEGRPLG+SGL WLKIHLANL+ GGV
Sbjct: 550 FYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGRSGLHWLKIHLANLFAGGV 609
Query: 1723 EKLSYDGRISFVENYIAEIFDSADNSLNGNRWWLKAEDPFQCLAACINLSEALRSSSPHT 1902
EKLS+DGR++FV+N++ +IFDSA+N +NGNRWWL AEDPFQCLAACINLSE+L+SSSPH+
Sbjct: 610 EKLSHDGRLAFVDNHLDDIFDSAENPINGNRWWLTAEDPFQCLAACINLSESLKSSSPHS 669
Query: 1903 VVSHLPIHQDGSCNGLQHYAALGRDSFEAAAVNLIAGDKPADVYSEIAERVHNIMKRDSE 2082
V+S+LPIHQDGSCNGLQHYAALGRDS EAAAVNL+AG+KPADVYSEIA RVHNIMKRDS+
Sbjct: 670 VLSYLPIHQDGSCNGLQHYAALGRDSLEAAAVNLVAGEKPADVYSEIAVRVHNIMKRDSD 729
Query: 2083 KDPATDPSALLAKLLIGQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGLITDDRLL 2262
KDPAT+P+A LAKLLI QVDRKLVKQTVMTSVYGVT+VGAREQIKRRLEEKG ITDDR+L
Sbjct: 730 KDPATNPNASLAKLLIDQVDRKLVKQTVMTSVYGVTFVGAREQIKRRLEEKGHITDDRVL 789
Query: 2263 FSAACYAAKVTLAALGELFQAARAIMGWLGDCAKIIASENQPVRWTTPLGLPVVQPYFKT 2442
F+AACY AKVTLAALGELFQAAR IMGWLGDCAK+IASENQPV+WTTPLGLPVVQPY+K+
Sbjct: 790 FAAACYTAKVTLAALGELFQAARNIMGWLGDCAKVIASENQPVQWTTPLGLPVVQPYYKS 849
Query: 2443 QRHVIRTSLQVLALQREGDSVEVRKQRTAFPPNFVHSLDGSHMMMTAIACRDGGLRFAGV 2622
+RH+IRTSLQVLALQREGDSVEVRKQRTAFPPNFVHSLDGSHMMMTA+ACRD GL FAGV
Sbjct: 850 ERHLIRTSLQVLALQREGDSVEVRKQRTAFPPNFVHSLDGSHMMMTAVACRDAGLHFAGV 909
Query: 2623 HDSFWTHACDVDRMNQILRQKFVDLYNMPILESLLESFETSYPTLTFPPLPNRGDFDLNK 2802
HDSFWTHACDV++MNQILR+KFV+LY+MP+LE+L ES +TSYP+L FPPLP RG+FDL +
Sbjct: 910 HDSFWTHACDVEKMNQILREKFVELYSMPVLENLFESVQTSYPSLVFPPLPERGNFDLRE 969
Query: 2803 VVQ 2811
V++
Sbjct: 970 VLK 972