BLASTX nr result

ID: Rehmannia28_contig00003976 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00003976
         (744 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAA84682.1| unknown protein (chloroplast) [Nicotiana tabacum]...    77   5e-22
gb|AAA84681.1| unknown protein (chloroplast) [Nicotiana tabacum]...    69   3e-12
gb|EYU35473.1| hypothetical protein MIMGU_mgv11b021317mg [Erythr...    62   2e-09
gb|EYU41120.1| hypothetical protein MIMGU_mgv11b021666mg, partia...    57   1e-07

>gb|AAA84682.1| unknown protein (chloroplast) [Nicotiana tabacum]
           gi|224352|prf||1102209F ORF 6
          Length = 79

 Score = 77.0 bits (188), Expect(2) = 5e-22
 Identities = 36/42 (85%), Positives = 38/42 (90%)
 Frame = +3

Query: 24  MKVDYLSVYFQTSIIPSRTKHESFDSFGSHAQLLRVNSHSFF 149
           MKVDY S+ FQ SIIPSRTKHESFDSFGSHAQLL+VNSH FF
Sbjct: 1   MKVDYFSIPFQNSIIPSRTKHESFDSFGSHAQLLKVNSHIFF 42



 Score = 55.5 bits (132), Expect(2) = 5e-22
 Identities = 28/39 (71%), Positives = 30/39 (76%), Gaps = 1/39 (2%)
 Frame = +1

Query: 145 FFYECNEPILSSFFKVQKN-ESNAKQKYLEDSSDKIKNM 258
           FFYECNEPI SS F  QK+ E+N   KY EDSSDKIKNM
Sbjct: 41  FFYECNEPIFSSLFIFQKDIETNVIPKYSEDSSDKIKNM 79


>gb|AAA84681.1| unknown protein (chloroplast) [Nicotiana tabacum]
           gi|224350|prf||1102209D ORF 4
          Length = 64

 Score = 69.3 bits (168), Expect = 3e-12
 Identities = 34/48 (70%), Positives = 39/48 (81%), Gaps = 1/48 (2%)
 Frame = -2

Query: 293 EEKKRNNFADNYIFLILSEESSKYFCFALDSF-FWTLKKEERIGSLHS 153
           ++KKRNNFADNYIF ILSEESS+YF   L S  FW + KEE+IGSLHS
Sbjct: 17  KKKKRNNFADNYIFFILSEESSEYFGITLVSISFWNMNKEEKIGSLHS 64


>gb|EYU35473.1| hypothetical protein MIMGU_mgv11b021317mg [Erythranthe guttata]
          Length = 70

 Score = 62.0 bits (149), Expect = 2e-09
 Identities = 30/38 (78%), Positives = 32/38 (84%)
 Frame = +3

Query: 24  MKVDYLSVYFQTSIIPSRTKHESFDSFGSHAQLLRVNS 137
           MKVDYL V+F+ SIIPSRTKHES DSFGSH QLLR  S
Sbjct: 1   MKVDYLFVHFKASIIPSRTKHESKDSFGSHVQLLRCKS 38


>gb|EYU41120.1| hypothetical protein MIMGU_mgv11b021666mg, partial [Erythranthe
           guttata]
          Length = 71

 Score = 57.4 bits (137), Expect = 1e-07
 Identities = 27/30 (90%), Positives = 29/30 (96%)
 Frame = +3

Query: 39  LSVYFQTSIIPSRTKHESFDSFGSHAQLLR 128
           LSV+F+TSIIPSRTKHESFD FGSHAQLLR
Sbjct: 13  LSVHFKTSIIPSRTKHESFDLFGSHAQLLR 42


Top