BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00003946
         (3392 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011081022.1| PREDICTED: probable NOT transcription comple...   989   0.0  
ref|XP_011081024.1| PREDICTED: probable NOT transcription comple...   985   0.0  
ref|XP_012835475.1| PREDICTED: probable NOT transcription comple...   941   0.0  
ref|XP_012835473.1| PREDICTED: probable NOT transcription comple...   937   0.0  
ref|XP_012835476.1| PREDICTED: probable NOT transcription comple...   921   0.0  
emb|CDP09799.1| unnamed protein product [Coffea canephora]            600   0.0  
ref|XP_010651076.1| PREDICTED: probable NOT transcription comple...   598   0.0  
ref|XP_011092547.1| PREDICTED: DNA-directed RNA polymerases II, ...   574   0.0  
ref|XP_010661086.1| PREDICTED: probable NOT transcription comple...   584   0.0  
ref|XP_010661082.1| PREDICTED: probable NOT transcription comple...   584   0.0  
emb|CBI34721.3| unnamed protein product [Vitis vinifera]              583   0.0  
ref|XP_015165686.1| PREDICTED: probable NOT transcription comple...   559   0.0  
ref|XP_015079402.1| PREDICTED: probable NOT transcription comple...   557   0.0  
ref|XP_010322383.1| PREDICTED: probable NOT transcription comple...   556   0.0  
ref|XP_015079401.1| PREDICTED: probable NOT transcription comple...   552   0.0  
ref|XP_007042502.1| DNA-directed RNA polymerase family protein [...   534   e-178
ref|XP_002285322.1| PREDICTED: DNA-directed RNA polymerases II, ...   534   e-178
emb|CAN60923.1| hypothetical protein VITISV_019338 [Vitis vinifera]   533   e-178
ref|XP_012436162.1| PREDICTED: DNA-directed RNA polymerases II, ...   532   e-178
ref|XP_006348609.1| PREDICTED: DNA-directed RNA polymerases II, ...   532   e-178

>ref|XP_011081022.1| PREDICTED: probable NOT transcription complex subunit VIP2 isoform X1
            [Sesamum indicum] gi|747068528|ref|XP_011081023.1|
            PREDICTED: probable NOT transcription complex subunit
            VIP2 isoform X1 [Sesamum indicum]
          Length = 556

 Score =  989 bits (2558), Expect = 0.0
 Identities = 488/540 (90%), Positives = 501/540 (92%)
 Frame = -2

Query: 1876 PDNTGRAFATSFSAQSGSSGAVLNQSGGNIQGLHNIHGSFNMSNMPGTYASRNSANLGGL 1697
            PDNTGRAFATSFSAQSGSSGAVLNQSGGNIQGLHNIHG+FNMSNMPG YASRNSANL GL
Sbjct: 17   PDNTGRAFATSFSAQSGSSGAVLNQSGGNIQGLHNIHGNFNMSNMPGPYASRNSANLAGL 76

Query: 1696 PNGIQQAPGSVSNGRYAIXXXXXXXXXXXXXXXXXXXGVTNTGGPGVLPNMGNTGRITNS 1517
            PNG+QQAPGSVSNGRY I                   GVTNTGGPGVL N+GN+GRITNS
Sbjct: 77   PNGVQQAPGSVSNGRYTINSLPNALSQLSLGSSHGHSGVTNTGGPGVLTNIGNSGRITNS 136

Query: 1516 IGGLVGGGNTSRGASSTGVANIPPGLASRLNLTAPQVVSMLNNSYSGAGVPLSQNQFQAG 1337
            IGGLVGGGNTSRGASS GVANIP GLASRLNLTAPQVVS+L NSYSGAGVPLSQNQFQAG
Sbjct: 137  IGGLVGGGNTSRGASSAGVANIP-GLASRLNLTAPQVVSILGNSYSGAGVPLSQNQFQAG 195

Query: 1336 NNNFSFMALLNDSNAHDNATFDVNDFPQLSGRPPSAGGSHGQIGLMQKHNIGFAQQNQEF 1157
            NNNFSFMALLNDSNAHDNATFDVNDFPQLSGRPPSAGGSHGQIGLMQKHNIGF QQNQEF
Sbjct: 196  NNNFSFMALLNDSNAHDNATFDVNDFPQLSGRPPSAGGSHGQIGLMQKHNIGFGQQNQEF 255

Query: 1156 SIQNEDFPALPGYKGGLNVGGSAEYTINAHQKEQIHDSMANLMQPQQLSMGRASGFNFGG 977
            SIQNEDFPALPGYKGGLNVGGSAEYT+NAHQKEQIHDSMANLMQ QQLSMGR+SGFNFGG
Sbjct: 256  SIQNEDFPALPGYKGGLNVGGSAEYTVNAHQKEQIHDSMANLMQSQQLSMGRSSGFNFGG 315

Query: 976  SYSSHHPQQHRASSINGTGVSYLTSGNQDLHFHGPEXXXXXXXXQTRFINSFRDKDMKST 797
            SYSSHHPQQHRASSINGTGVSYLTSGNQDLHFHGPE        Q+RFIN FRDK+MKST
Sbjct: 316  SYSSHHPQQHRASSINGTGVSYLTSGNQDLHFHGPEQYQQFQQSQSRFINPFRDKEMKST 375

Query: 796  QGSQSLPDQYGMLGLLSIIKMVNPALTSLALGIDLTTLGLNLNSSETLHKKFASPWSDEP 617
            QGSQS+PDQYGMLGLLSIIKMVNPALTSLALGIDLTTLGLNLNSSETLHKKFASPWSDEP
Sbjct: 376  QGSQSVPDQYGMLGLLSIIKMVNPALTSLALGIDLTTLGLNLNSSETLHKKFASPWSDEP 435

Query: 616  VRGEPEYSVPECYYAKQTPPLKQSYFARFRPETLFYIFYSMPKDEAQLFAASELYNRGWF 437
            VRGEPEYSVPECYYAKQTPPLKQ+YFARFRPETLFYIFYSMPKDEAQLFAA+EL NRGWF
Sbjct: 436  VRGEPEYSVPECYYAKQTPPLKQTYFARFRPETLFYIFYSMPKDEAQLFAANELCNRGWF 495

Query: 436  YHRELRLWFTRVKNMEPLVKTNSYERGCYFCFDPNTWQTARKDNFVLQYEMVEKRPALPQ 257
            YHRELRLWFTRVKNMEPLVKTN+YERGCYFCFDPNTWQTARKDNFVL YEMVEKRPALPQ
Sbjct: 496  YHRELRLWFTRVKNMEPLVKTNTYERGCYFCFDPNTWQTARKDNFVLHYEMVEKRPALPQ 555


>ref|XP_011081024.1| PREDICTED: probable NOT transcription complex subunit VIP2 isoform X2
            [Sesamum indicum]
          Length = 555

 Score =  985 bits (2547), Expect = 0.0
 Identities = 487/540 (90%), Positives = 500/540 (92%)
 Frame = -2

Query: 1876 PDNTGRAFATSFSAQSGSSGAVLNQSGGNIQGLHNIHGSFNMSNMPGTYASRNSANLGGL 1697
            PDNTGRAFATSFSAQSGSSGAVLNQSGGNIQGLHNIHG+FNMSNMPG YASRNSANL GL
Sbjct: 17   PDNTGRAFATSFSAQSGSSGAVLNQSGGNIQGLHNIHGNFNMSNMPGPYASRNSANLAGL 76

Query: 1696 PNGIQQAPGSVSNGRYAIXXXXXXXXXXXXXXXXXXXGVTNTGGPGVLPNMGNTGRITNS 1517
            PNG+QQAPGSVSNGRY I                   GVTNTGGPGVL N+GN+GRITNS
Sbjct: 77   PNGVQQAPGSVSNGRYTINSLPNALSQLSLGSSHGHSGVTNTGGPGVLTNIGNSGRITNS 136

Query: 1516 IGGLVGGGNTSRGASSTGVANIPPGLASRLNLTAPQVVSMLNNSYSGAGVPLSQNQFQAG 1337
            IGGLVGGGNTSRGASS GVANIP GLASRLNLTAPQVVS+L NSYSGAGVPLSQNQFQAG
Sbjct: 137  IGGLVGGGNTSRGASSAGVANIP-GLASRLNLTAPQVVSILGNSYSGAGVPLSQNQFQAG 195

Query: 1336 NNNFSFMALLNDSNAHDNATFDVNDFPQLSGRPPSAGGSHGQIGLMQKHNIGFAQQNQEF 1157
            NNNFSFMALLNDSNAHDNATFDVNDFPQLSGRPPSAGGSHGQIGLMQKHNIGF QQNQEF
Sbjct: 196  NNNFSFMALLNDSNAHDNATFDVNDFPQLSGRPPSAGGSHGQIGLMQKHNIGFGQQNQEF 255

Query: 1156 SIQNEDFPALPGYKGGLNVGGSAEYTINAHQKEQIHDSMANLMQPQQLSMGRASGFNFGG 977
            SIQNEDFPALPGYKGGLNVGGSAEYT+NAHQKEQIHDSMANLMQ QQLSMGR+SGFNFGG
Sbjct: 256  SIQNEDFPALPGYKGGLNVGGSAEYTVNAHQKEQIHDSMANLMQSQQLSMGRSSGFNFGG 315

Query: 976  SYSSHHPQQHRASSINGTGVSYLTSGNQDLHFHGPEXXXXXXXXQTRFINSFRDKDMKST 797
            SYSSHHPQQHRASSINGTGVSYLTSGNQDLHFHGPE         +RFIN FRDK+MKST
Sbjct: 316  SYSSHHPQQHRASSINGTGVSYLTSGNQDLHFHGPEYQQFQQSQ-SRFINPFRDKEMKST 374

Query: 796  QGSQSLPDQYGMLGLLSIIKMVNPALTSLALGIDLTTLGLNLNSSETLHKKFASPWSDEP 617
            QGSQS+PDQYGMLGLLSIIKMVNPALTSLALGIDLTTLGLNLNSSETLHKKFASPWSDEP
Sbjct: 375  QGSQSVPDQYGMLGLLSIIKMVNPALTSLALGIDLTTLGLNLNSSETLHKKFASPWSDEP 434

Query: 616  VRGEPEYSVPECYYAKQTPPLKQSYFARFRPETLFYIFYSMPKDEAQLFAASELYNRGWF 437
            VRGEPEYSVPECYYAKQTPPLKQ+YFARFRPETLFYIFYSMPKDEAQLFAA+EL NRGWF
Sbjct: 435  VRGEPEYSVPECYYAKQTPPLKQTYFARFRPETLFYIFYSMPKDEAQLFAANELCNRGWF 494

Query: 436  YHRELRLWFTRVKNMEPLVKTNSYERGCYFCFDPNTWQTARKDNFVLQYEMVEKRPALPQ 257
            YHRELRLWFTRVKNMEPLVKTN+YERGCYFCFDPNTWQTARKDNFVL YEMVEKRPALPQ
Sbjct: 495  YHRELRLWFTRVKNMEPLVKTNTYERGCYFCFDPNTWQTARKDNFVLHYEMVEKRPALPQ 554


>ref|XP_012835475.1| PREDICTED: probable NOT transcription complex subunit VIP2 isoform X2
            [Erythranthe guttata] gi|604335009|gb|EYU38987.1|
            hypothetical protein MIMGU_mgv1a003853mg [Erythranthe
            guttata]
          Length = 560

 Score =  941 bits (2433), Expect = 0.0
 Identities = 465/541 (85%), Positives = 485/541 (89%), Gaps = 1/541 (0%)
 Frame = -2

Query: 1876 PDNTGRAFATSFSAQSGSSGAVLNQSGGNIQGLHNIHGSFNMSNMPGTYASRNSANLGGL 1697
            PDNTGRAFATSFSAQSGSSGAVLNQSGGN+QGLHNIHGSFNMSNMP  YASRNSANL G+
Sbjct: 17   PDNTGRAFATSFSAQSGSSGAVLNQSGGNLQGLHNIHGSFNMSNMPAPYASRNSANLSGI 76

Query: 1696 PNGIQQAPGSVSNGRYAIXXXXXXXXXXXXXXXXXXXGVTNTGGPGVLPNMGNTGRITNS 1517
            PN +QQAPGSVSNGRYAI                   GVTNTGGPGVLPNMGNTGRITNS
Sbjct: 77   PNTVQQAPGSVSNGRYAINSLPNALSQLSLGSSHGHSGVTNTGGPGVLPNMGNTGRITNS 136

Query: 1516 IGGLVGGGNTSRGASSTGVANIPPGLASRLNLTAPQVVSMLNNSYSGAGVPLSQNQFQAG 1337
            IGGLVGGGN SRGA+S+GV NIP GLASRLNLTAPQVVSML NSYSG+GVPLSQNQ+QAG
Sbjct: 137  IGGLVGGGNASRGANSSGVGNIP-GLASRLNLTAPQVVSMLGNSYSGSGVPLSQNQYQAG 195

Query: 1336 NNNFSFMALLNDSNAHDNATFDVNDFPQLSGRPPSAGGSHGQIGLMQKHNIGFAQQNQEF 1157
            NNNFSFMALLNDSNAHDN  FDVNDFPQLSGRPPSAGGSHGQIGLMQKHNIGFAQQNQEF
Sbjct: 196  NNNFSFMALLNDSNAHDNGGFDVNDFPQLSGRPPSAGGSHGQIGLMQKHNIGFAQQNQEF 255

Query: 1156 SIQNEDFPALPGYKGGLNVGGSAEYTINAHQKEQIHDSMANLMQPQQLSMGRASGFNFGG 977
            SIQNEDFPALPGYKGGLNVGG+AEYTIN HQKEQIHDSMANL+Q QQLSMGR+SGFNFGG
Sbjct: 256  SIQNEDFPALPGYKGGLNVGGNAEYTINTHQKEQIHDSMANLIQSQQLSMGRSSGFNFGG 315

Query: 976  SYSSHHPQQHRASSINGTGVSYLTSGNQDLHFHGPEXXXXXXXXQTRFIN-SFRDKDMKS 800
            SYSSHHPQQHRASSINGTGVSYLTSGNQDLHFHGP+        Q+RFIN  FRDKDMKS
Sbjct: 316  SYSSHHPQQHRASSINGTGVSYLTSGNQDLHFHGPDQYQQFQQSQSRFINHPFRDKDMKS 375

Query: 799  TQGSQSLPDQYGMLGLLSIIKMVNPALTSLALGIDLTTLGLNLNSSETLHKKFASPWSDE 620
            TQGSQ++PDQYGMLGLLSIIKMVNPALTSLALGIDLTTLGLNLNSS+TLHKKFASPWSDE
Sbjct: 376  TQGSQTVPDQYGMLGLLSIIKMVNPALTSLALGIDLTTLGLNLNSSDTLHKKFASPWSDE 435

Query: 619  PVRGEPEYSVPECYYAKQTPPLKQSYFARFRPETLFYIFYSMPKDEAQLFAASELYNRGW 440
            PVRGEPEY VPECYY KQ PPL Q  FARFRPETL Y+FYSMPKDEAQ+FAA+ELYNRGW
Sbjct: 436  PVRGEPEYVVPECYYDKQRPPLNQGTFARFRPETLLYVFYSMPKDEAQIFAANELYNRGW 495

Query: 439  FYHRELRLWFTRVKNMEPLVKTNSYERGCYFCFDPNTWQTARKDNFVLQYEMVEKRPALP 260
            FYHRE RLWFTRV N+EPLVKTNSYERG Y CFDPNTW  +RKDNFVLQYEMVEKRP L 
Sbjct: 496  FYHREHRLWFTRVANVEPLVKTNSYERGSYICFDPNTWHASRKDNFVLQYEMVEKRPTLS 555

Query: 259  Q 257
            Q
Sbjct: 556  Q 556


>ref|XP_012835473.1| PREDICTED: probable NOT transcription complex subunit VIP2 isoform X1
            [Erythranthe guttata]
          Length = 561

 Score =  937 bits (2421), Expect = 0.0
 Identities = 465/542 (85%), Positives = 485/542 (89%), Gaps = 2/542 (0%)
 Frame = -2

Query: 1876 PDNTGRAFATSFSAQSGSSGAVLNQSGGNIQGLHNIHGSFNMSNMPGTYASRNSANLGGL 1697
            PDNTGRAFATSFSAQSGSSGAVLNQSGGN+QGLHNIHGSFNMSNMP  YASRNSANL G+
Sbjct: 17   PDNTGRAFATSFSAQSGSSGAVLNQSGGNLQGLHNIHGSFNMSNMPAPYASRNSANLSGI 76

Query: 1696 PNGIQQAPGSVSNGRYAIXXXXXXXXXXXXXXXXXXXGVTNTGGPGVLPNMGNTGRITNS 1517
            PN +QQAPGSVSNGRYAI                   GVTNTGGPGVLPNMGNTGRITNS
Sbjct: 77   PNTVQQAPGSVSNGRYAINSLPNALSQLSLGSSHGHSGVTNTGGPGVLPNMGNTGRITNS 136

Query: 1516 IGGLVGGGNTSRGASSTGVANIPPGLASRLNLTAPQVVSMLNNSYSGAGVPLSQNQFQAG 1337
            IGGLVGGGN SRGA+S+GV NIP GLASRLNLTAPQVVSML NSYSG+GVPLSQNQ+QAG
Sbjct: 137  IGGLVGGGNASRGANSSGVGNIP-GLASRLNLTAPQVVSMLGNSYSGSGVPLSQNQYQAG 195

Query: 1336 NNNFSFMALLNDSNAHDNATFDVNDFPQLSGRPPSAGGSHGQIGLMQKHNIGFAQQNQEF 1157
            NNNFSFMALLNDSNAHDN  FDVNDFPQLSGRPPSAGGSHGQIGLMQKHNIGFAQQNQEF
Sbjct: 196  NNNFSFMALLNDSNAHDNGGFDVNDFPQLSGRPPSAGGSHGQIGLMQKHNIGFAQQNQEF 255

Query: 1156 SIQNEDFPALPGYK-GGLNVGGSAEYTINAHQKEQIHDSMANLMQPQQLSMGRASGFNFG 980
            SIQNEDFPALPGYK GGLNVGG+AEYTIN HQKEQIHDSMANL+Q QQLSMGR+SGFNFG
Sbjct: 256  SIQNEDFPALPGYKAGGLNVGGNAEYTINTHQKEQIHDSMANLIQSQQLSMGRSSGFNFG 315

Query: 979  GSYSSHHPQQHRASSINGTGVSYLTSGNQDLHFHGPEXXXXXXXXQTRFINS-FRDKDMK 803
            GSYSSHHPQQHRASSINGTGVSYLTSGNQDLHFHGP+        Q+RFIN  FRDKDMK
Sbjct: 316  GSYSSHHPQQHRASSINGTGVSYLTSGNQDLHFHGPDQYQQFQQSQSRFINHPFRDKDMK 375

Query: 802  STQGSQSLPDQYGMLGLLSIIKMVNPALTSLALGIDLTTLGLNLNSSETLHKKFASPWSD 623
            STQGSQ++PDQYGMLGLLSIIKMVNPALTSLALGIDLTTLGLNLNSS+TLHKKFASPWSD
Sbjct: 376  STQGSQTVPDQYGMLGLLSIIKMVNPALTSLALGIDLTTLGLNLNSSDTLHKKFASPWSD 435

Query: 622  EPVRGEPEYSVPECYYAKQTPPLKQSYFARFRPETLFYIFYSMPKDEAQLFAASELYNRG 443
            EPVRGEPEY VPECYY KQ PPL Q  FARFRPETL Y+FYSMPKDEAQ+FAA+ELYNRG
Sbjct: 436  EPVRGEPEYVVPECYYDKQRPPLNQGTFARFRPETLLYVFYSMPKDEAQIFAANELYNRG 495

Query: 442  WFYHRELRLWFTRVKNMEPLVKTNSYERGCYFCFDPNTWQTARKDNFVLQYEMVEKRPAL 263
            WFYHRE RLWFTRV N+EPLVKTNSYERG Y CFDPNTW  +RKDNFVLQYEMVEKRP L
Sbjct: 496  WFYHREHRLWFTRVANVEPLVKTNSYERGSYICFDPNTWHASRKDNFVLQYEMVEKRPTL 555

Query: 262  PQ 257
             Q
Sbjct: 556  SQ 557


>ref|XP_012835476.1| PREDICTED: probable NOT transcription complex subunit VIP2 isoform X3
            [Erythranthe guttata]
          Length = 555

 Score =  921 bits (2380), Expect = 0.0
 Identities = 459/542 (84%), Positives = 479/542 (88%), Gaps = 2/542 (0%)
 Frame = -2

Query: 1876 PDNTGRAFATSFSAQSGSSGAVLNQSGGNIQGLHNIHGSFNMSNMPGTYASRNSANLGGL 1697
            PDNTGRAFATSFSAQSGSSGAVLNQSGGN+QGLHNIHGSFNMSNMP  YASRNSANL G+
Sbjct: 17   PDNTGRAFATSFSAQSGSSGAVLNQSGGNLQGLHNIHGSFNMSNMPAPYASRNSANLSGI 76

Query: 1696 PNGIQQAPGSVSNGRYAIXXXXXXXXXXXXXXXXXXXGVTNTGGPGVLPNMGNTGRITNS 1517
            PN +QQAPGSVSNGRYAI                         GPGVLPNMGNTGRITNS
Sbjct: 77   PNTVQQAPGSVSNGRYAINSLPNALSQLSLGSSHGH------SGPGVLPNMGNTGRITNS 130

Query: 1516 IGGLVGGGNTSRGASSTGVANIPPGLASRLNLTAPQVVSMLNNSYSGAGVPLSQNQFQAG 1337
            IGGLVGGGN SRGA+S+GV NIP GLASRLNLTAPQVVSML NSYSG+GVPLSQNQ+QAG
Sbjct: 131  IGGLVGGGNASRGANSSGVGNIP-GLASRLNLTAPQVVSMLGNSYSGSGVPLSQNQYQAG 189

Query: 1336 NNNFSFMALLNDSNAHDNATFDVNDFPQLSGRPPSAGGSHGQIGLMQKHNIGFAQQNQEF 1157
            NNNFSFMALLNDSNAHDN  FDVNDFPQLSGRPPSAGGSHGQIGLMQKHNIGFAQQNQEF
Sbjct: 190  NNNFSFMALLNDSNAHDNGGFDVNDFPQLSGRPPSAGGSHGQIGLMQKHNIGFAQQNQEF 249

Query: 1156 SIQNEDFPALPGYK-GGLNVGGSAEYTINAHQKEQIHDSMANLMQPQQLSMGRASGFNFG 980
            SIQNEDFPALPGYK GGLNVGG+AEYTIN HQKEQIHDSMANL+Q QQLSMGR+SGFNFG
Sbjct: 250  SIQNEDFPALPGYKAGGLNVGGNAEYTINTHQKEQIHDSMANLIQSQQLSMGRSSGFNFG 309

Query: 979  GSYSSHHPQQHRASSINGTGVSYLTSGNQDLHFHGPEXXXXXXXXQTRFINS-FRDKDMK 803
            GSYSSHHPQQHRASSINGTGVSYLTSGNQDLHFHGP+        Q+RFIN  FRDKDMK
Sbjct: 310  GSYSSHHPQQHRASSINGTGVSYLTSGNQDLHFHGPDQYQQFQQSQSRFINHPFRDKDMK 369

Query: 802  STQGSQSLPDQYGMLGLLSIIKMVNPALTSLALGIDLTTLGLNLNSSETLHKKFASPWSD 623
            STQGSQ++PDQYGMLGLLSIIKMVNPALTSLALGIDLTTLGLNLNSS+TLHKKFASPWSD
Sbjct: 370  STQGSQTVPDQYGMLGLLSIIKMVNPALTSLALGIDLTTLGLNLNSSDTLHKKFASPWSD 429

Query: 622  EPVRGEPEYSVPECYYAKQTPPLKQSYFARFRPETLFYIFYSMPKDEAQLFAASELYNRG 443
            EPVRGEPEY VPECYY KQ PPL Q  FARFRPETL Y+FYSMPKDEAQ+FAA+ELYNRG
Sbjct: 430  EPVRGEPEYVVPECYYDKQRPPLNQGTFARFRPETLLYVFYSMPKDEAQIFAANELYNRG 489

Query: 442  WFYHRELRLWFTRVKNMEPLVKTNSYERGCYFCFDPNTWQTARKDNFVLQYEMVEKRPAL 263
            WFYHRE RLWFTRV N+EPLVKTNSYERG Y CFDPNTW  +RKDNFVLQYEMVEKRP L
Sbjct: 490  WFYHREHRLWFTRVANVEPLVKTNSYERGSYICFDPNTWHASRKDNFVLQYEMVEKRPTL 549

Query: 262  PQ 257
             Q
Sbjct: 550  SQ 551


>emb|CDP09799.1| unnamed protein product [Coffea canephora]
          Length = 524

 Score =  600 bits (1546), Expect = 0.0
 Identities = 310/532 (58%), Positives = 376/532 (70%), Gaps = 36/532 (6%)
 Frame = -2

Query: 1744 MPGTYASRNSANLGGLPNGIQQAPGSVSNGRYAIXXXXXXXXXXXXXXXXXXXGVTNTGG 1565
            M GT+ SRNSA L G P G+QQ  GS S+GR+ I                   GVTN GG
Sbjct: 1    MGGTFGSRNSAMLSGPPGGVQQVSGSGSSGRFTINNLPAALSQLSLASSHGHPGVTNNGG 60

Query: 1564 PGVLPNMGNTGRITNSIGGLVGGGNTSRGASSTGVANIPPGLASRLNLTAPQVVSMLNNS 1385
             G LPN+GN+GR+ N +   V GGN +RG  S G +N+  G+ASRLNLT PQVVSML NS
Sbjct: 61   SGALPNLGNSGRVANPMANYVSGGNIARGLGSGGGSNLA-GVASRLNLTDPQVVSMLGNS 119

Query: 1384 YSGAGVPLSQNQFQAGNNNFSFMALLNDSNAHDNATFDVNDFPQLSGRPPSAGGSHGQIG 1205
            Y  +GVPLS N F AGN  ++ + LLND NAH++ TFD+NDFPQL+GRP S GGS GQIG
Sbjct: 120  YPASGVPLSHNHFPAGNGPYTSL-LLNDLNAHEDTTFDMNDFPQLAGRPSSTGGSQGQIG 178

Query: 1204 LMQKHNIGFAQQNQEFSIQNEDFPALPGYKGGLNVGGSAEYTINAHQKEQIHDSMANLMQ 1025
             ++K N+GF+QQNQEFSIQNEDFPALPGYKGG     + E+ +N HQKEQIH+ M+++M 
Sbjct: 179  FLRKQNVGFSQQNQEFSIQNEDFPALPGYKGG-----NVEFPMNIHQKEQIHN-MSSMMH 232

Query: 1024 PQQLSMGRASGFNFGGSYSSHHPQ-QHRASSINGTGVSYLTS---GNQDLHFHGPEXXXX 857
            PQ + +GR++G NFGG+ S+H+ Q Q  ASS NG+G+S+L S     QD+HFH PE    
Sbjct: 233  PQNMPLGRSAGVNFGGASSAHYQQAQQHASSTNGSGLSFLPSKYQNYQDIHFHDPEARSV 292

Query: 856  XXXXQ----TRFINS----------------------------FRDKDMKSTQGSQSLPD 773
                     T   NS                            +RD+D K TQ + +  D
Sbjct: 293  GQPASGSGPTNLSNSVPGMAPYEQLTQQYQQFQKHSNFRMGTPYRDQDFK-TQATPAPAD 351

Query: 772  QYGMLGLLSIIKMVNPALTSLALGIDLTTLGLNLNSSETLHKKFASPWSDEPVRGEPEYS 593
            ++GMLGLL+IIKMV+P LTSLALG DLTTLGLNLNSSE++HKKFASPWS+EP +GEPEYS
Sbjct: 352  KFGMLGLLNIIKMVDPPLTSLALGTDLTTLGLNLNSSESIHKKFASPWSEEPAKGEPEYS 411

Query: 592  VPECYYAKQTPPLKQSYFARFRPETLFYIFYSMPKDEAQLFAASELYNRGWFYHRELRLW 413
            +P CYYA+Q   LKQS F++FRPETLFYIFYSMPKDEAQL+AA+ELYNRGW YHRELRLW
Sbjct: 412  IPTCYYAEQLLALKQSCFSKFRPETLFYIFYSMPKDEAQLYAANELYNRGWLYHRELRLW 471

Query: 412  FTRVKNMEPLVKTNSYERGCYFCFDPNTWQTARKDNFVLQYEMVEKRPALPQ 257
              R KNMEPLVKT +YERG YF FDPNTW+T RKDNFVLQY+M+E+RP +PQ
Sbjct: 472  LARTKNMEPLVKTPTYERGSYFSFDPNTWETVRKDNFVLQYDMIERRPVIPQ 523


>ref|XP_010651076.1| PREDICTED: probable NOT transcription complex subunit VIP2 isoform X2
            [Vitis vinifera]
          Length = 640

 Score =  598 bits (1541), Expect = 0.0
 Identities = 326/630 (51%), Positives = 400/630 (63%), Gaps = 91/630 (14%)
 Frame = -2

Query: 1873 DNTGRAFATSFSAQSGSSGAVLNQSGGNIQGLHNIHGSFNMSNMPGTYASRNSANLGGLP 1694
            D+ GR+FATSFSAQSG++  V + SG +IQGLHNIHGSFN+ NMPGT ASRNS       
Sbjct: 18   DSNGRSFATSFSAQSGAASPVFHHSG-SIQGLHNIHGSFNVPNMPGTLASRNSTINSVPS 76

Query: 1693 NGIQQAPGSVSNGRYAIXXXXXXXXXXXXXXXXXXXGVTNTGG----------------- 1565
             G+QQ  G++S+GRYA                    GV N GG                 
Sbjct: 77   GGVQQPTGNLSSGRYASNSLPVALSQISHGSSHGHSGVANRGGISVVGSPGYSSSTNGVG 136

Query: 1564 ---PGVLPN------------------MGNTG-RITNSIGGLVGGGNTSRGASSTGVANI 1451
               PG+LP                   +GN G RIT+S+G +VGGGN  R  SS G  ++
Sbjct: 137  GSIPGILPTSAAIANRSAVPGLGVSPILGNAGPRITSSMGNIVGGGNIGRSISSGGGLSV 196

Query: 1450 PPGLASRLNLTA------------------------PQVVSMLNNSYSGAGVPLSQNQFQ 1343
             PG+ASRLNL A                        PQV+SML NSY  AG PLSQ   Q
Sbjct: 197  -PGIASRLNLAANSGSGSLNVQGPNRLMSGVLQQASPQVISMLGNSYPSAGGPLSQGHVQ 255

Query: 1342 AGNNNFSFMALLNDSNAHDNATFDVNDFPQLSGRPPSAGGSHGQIGLMQKHNIG---FAQ 1172
               NN S M +LND N+++N+ FD+NDFPQL+ RP S+GG  GQ+G ++K  +G     Q
Sbjct: 256  T-VNNLSSMGMLNDVNSNENSPFDINDFPQLTSRPSSSGGPQGQLGSLRKQGLGVSPIVQ 314

Query: 1171 QNQEFSIQNEDFPALPGYKGGLNVGGSAEYTINAHQKEQIHDSMANLMQPQQLSMGRASG 992
            QNQEFSIQNEDFPALPG+K     GG+A+Y ++ HQKEQ HD+  ++MQ Q  SMGR++G
Sbjct: 315  QNQEFSIQNEDFPALPGFK-----GGNADYAMDLHQKEQFHDNTVSMMQSQHFSMGRSAG 369

Query: 991  FNFGGSYSSHHPQQHR--ASSINGTGVSYLTSGNQD-LHFHGPE---------------- 869
            FN GGSYSSH PQQ +  A +++  GVS+    NQD LH HG +                
Sbjct: 370  FNLGGSYSSHRPQQQQQHAPAVSSGGVSFSPVNNQDLLHLHGSDIFPSSHSTYHSQLIQQ 429

Query: 868  ------XXXXXXXXQTRFINSFRDKDMKSTQGSQSLPDQYGMLGLLSIIKMVNPALTSLA 707
                           +    +FRD+ MKS Q +Q+ PD +G+LGLLS+I+M +P LTSLA
Sbjct: 430  YQQHQNQSQFRLQQMSAVSQAFRDQGMKSMQATQAAPDPFGLLGLLSVIRMSDPDLTSLA 489

Query: 706  LGIDLTTLGLNLNSSETLHKKFASPWSDEPVRGEPEYSVPECYYAKQTPPLKQSYFARFR 527
            LGIDLTTLGLNLNS+E LHK F SPWSDEP +G+PE+SVP+CYYAKQ P L Q YF +F+
Sbjct: 490  LGIDLTTLGLNLNSAENLHKTFGSPWSDEPAKGDPEFSVPQCYYAKQPPALHQGYFLKFQ 549

Query: 526  PETLFYIFYSMPKDEAQLFAASELYNRGWFYHRELRLWFTRVKNMEPLVKTNSYERGCYF 347
             ETLFYIFYSMPKDEAQL+AA+ELYNRGWF+HRE RLWF RV NMEPLVKTN+YERG Y 
Sbjct: 550  VETLFYIFYSMPKDEAQLYAANELYNRGWFFHREHRLWFIRVANMEPLVKTNTYERGSYL 609

Query: 346  CFDPNTWQTARKDNFVLQYEMVEKRPALPQ 257
            CFDPNTW++ RKDNFVL YE++EK+P LPQ
Sbjct: 610  CFDPNTWESVRKDNFVLHYELLEKKPPLPQ 639


>ref|XP_011092547.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3
            [Sesamum indicum]
          Length = 319

 Score =  574 bits (1479), Expect = 0.0
 Identities = 290/319 (90%), Positives = 298/319 (93%)
 Frame = +2

Query: 2147 MEGVSYQRFPKIKIRTVRDDFMKFELRETDASIANALRRVMIAEVPTIAIDLVEIEVNSS 2326
            MEGVSYQRFPKIKIRTVRDDFMKFELR+TDASIANALRRVMIAEVPTIAIDLVEIEVNSS
Sbjct: 1    MEGVSYQRFPKIKIRTVRDDFMKFELRDTDASIANALRRVMIAEVPTIAIDLVEIEVNSS 60

Query: 2327 VLNDEFIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLRAKCINDQTLDV 2506
            VLNDEFIAHRLGLIPLTSERAM+MRFSRDCDACDGDGQCEYCSVEFHLRAKCINDQTLDV
Sbjct: 61   VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEYCSVEFHLRAKCINDQTLDV 120

Query: 2507 TSKDLYSSDHTVVPVDFPDSSTGLDNADNRGIIIVKLRRGQELGLRAIARKGIGKDHAKW 2686
            TSKDLYSSDHTVVPVDF DSSTG DN +NRGIIIVKLRRGQEL LRAIARKGIGKDHAKW
Sbjct: 121  TSKDLYSSDHTVVPVDFSDSSTGFDNTENRGIIIVKLRRGQELVLRAIARKGIGKDHAKW 180

Query: 2687 SPAATVTFMYEPEIYINXXXXXXXXXXXXXXFVESSPTKVFDINANTQQVYIYDAEAYTY 2866
            SPAATVTFMYEPEIYIN              FV+SSPTKVFDIN NT QVY++DAEAYTY
Sbjct: 181  SPAATVTFMYEPEIYINEEMMEGLTLEEKKEFVDSSPTKVFDINPNTHQVYVHDAEAYTY 240

Query: 2867 DDEVLKKAEAMGKPGLVEIHAKEDSFIFTVETTGAIKASQLFLNAIEVLKQKLDAVRLSA 3046
            DDEVLKKAEAMGKPGLVEIHAKEDSFIFTVETTG IKASQLFLNAI+VLKQKLDAVRLS+
Sbjct: 241  DDEVLKKAEAMGKPGLVEIHAKEDSFIFTVETTGGIKASQLFLNAIDVLKQKLDAVRLSS 300

Query: 3047 DTVEADEQFGELGAHMRGG 3103
            DTVEADEQFGELGAHMRGG
Sbjct: 301  DTVEADEQFGELGAHMRGG 319


>ref|XP_010661086.1| PREDICTED: probable NOT transcription complex subunit VIP2 isoform X2
            [Vitis vinifera]
          Length = 587

 Score =  584 bits (1506), Expect = 0.0
 Identities = 313/579 (54%), Positives = 388/579 (67%), Gaps = 39/579 (6%)
 Frame = -2

Query: 1876 PDNTGRAFATSFSAQSGSSGAVLNQSGGNIQGLHNIHGSFNMSNMPGTYASRNSANLGGL 1697
            PD TGR+F TSFSAQSGS+ A  +   G IQGLHNIHGSFN+ NMPG+ ASRNS   GG 
Sbjct: 17   PDTTGRSFTTSFSAQSGSAAAFNHL--GTIQGLHNIHGSFNIPNMPGSLASRNSTINGGH 74

Query: 1696 PNGIQQAPGSVSNGRYAIXXXXXXXXXXXXXXXXXXXGVTNTGGPGVLPNMGNTG-RITN 1520
            P GIQQ  GS+SNGR+ I                   GVTN GG GV P +GNTG RIT+
Sbjct: 75   PGGIQQPTGSLSNGRFPINHLPTALSQLSHASSHGHPGVTNRGGSGVSPMLGNTGPRITS 134

Query: 1519 SIGGLVGGGNTSRGASSTGVANIPPGLASRLNLT----------------------APQV 1406
            SIG L GGGN  R  SS G   +P GLAS L+L                       APQV
Sbjct: 135  SIGNLAGGGNIGRSLSSGGGLAMP-GLASHLSLISNGSGNMGIQGSNRLMGGVLSQAPQV 193

Query: 1405 VSMLNNSYSGAGVPLSQNQFQAGNNNFSFMALLNDSNAHDNATFDVNDFPQLSGRPPSAG 1226
            +SML NSYS  G   SQNQ QAGNN+ + MALL D + H+NA FD+NDFPQL+  P SAG
Sbjct: 194  ISMLGNSYSSVGGLRSQNQVQAGNNHLTSMALLKDLSVHENAPFDINDFPQLTAHPNSAG 253

Query: 1225 GSHGQIGLMQKHNIGFAQQNQEFSIQNEDFPALPGYKGGLNVGGSAEYTINAHQKEQIHD 1046
             S GQ+G ++K ++G   QNQEFSIQNEDFPALPG+KGG     + ++ +++H+KEQ+HD
Sbjct: 254  SSQGQLGSLRKQSVGVVHQNQEFSIQNEDFPALPGFKGG-----NTDFPVDSHRKEQLHD 308

Query: 1045 SMANLMQPQQLSMGRASGFNFGGSYSSH-HPQQHRASSINGTGVSYL----TSGNQDLHF 881
            S  ++MQ Q   MGR+ GFN G  YSSH   QQ  ASS+   G   +     + +  +  
Sbjct: 309  SAVSMMQSQHFPMGRSGGFNLGVPYSSHLQQQQQHASSVGSGGPPSIGLRPMNSSNTISG 368

Query: 880  HGPEXXXXXXXXQTRFINSFR-----------DKDMKSTQGSQSLPDQYGMLGLLSIIKM 734
             GP         Q +  + FR           D+D+KS Q  + + D++G+ GLL +I+M
Sbjct: 369  VGPYDQLIQQYQQLQSQSQFRMGQISAVGPHGDQDLKS-QSPEPVIDEFGLRGLLKVIRM 427

Query: 733  VNPALTSLALGIDLTTLGLNLNSSETLHKKFASPWSDEPVRGEPEYSVPECYYAKQTPPL 554
             NP LTSLALGIDLTTLGLNLN+S+ LHK+FASPW++EP +GEP+YS+PECYYAKQ P L
Sbjct: 428  NNPDLTSLALGIDLTTLGLNLNASDDLHKRFASPWAEEPHKGEPQYSIPECYYAKQPPVL 487

Query: 553  KQSYFARFRPETLFYIFYSMPKDEAQLFAASELYNRGWFYHRELRLWFTRVKNMEPLVKT 374
             Q++FA+   ETLFYIFYSMP++EAQL+AA EL+ RGWFYH+E RLW TR  +M+PLV+T
Sbjct: 488  NQAHFAKLHLETLFYIFYSMPREEAQLYAAHELHARGWFYHKEQRLWLTRNASMKPLVET 547

Query: 373  NSYERGCYFCFDPNTWQTARKDNFVLQYEMVEKRPALPQ 257
            NSYERG Y CFDPNTW+TA KDNF+LQ+EM+EK+P LPQ
Sbjct: 548  NSYERGSYLCFDPNTWETACKDNFILQFEMIEKKPDLPQ 586


>ref|XP_010661082.1| PREDICTED: probable NOT transcription complex subunit VIP2 isoform X1
            [Vitis vinifera]
          Length = 594

 Score =  584 bits (1506), Expect = 0.0
 Identities = 313/579 (54%), Positives = 388/579 (67%), Gaps = 39/579 (6%)
 Frame = -2

Query: 1876 PDNTGRAFATSFSAQSGSSGAVLNQSGGNIQGLHNIHGSFNMSNMPGTYASRNSANLGGL 1697
            PD TGR+F TSFSAQSGS+ A  +   G IQGLHNIHGSFN+ NMPG+ ASRNS   GG 
Sbjct: 24   PDTTGRSFTTSFSAQSGSAAAFNHL--GTIQGLHNIHGSFNIPNMPGSLASRNSTINGGH 81

Query: 1696 PNGIQQAPGSVSNGRYAIXXXXXXXXXXXXXXXXXXXGVTNTGGPGVLPNMGNTG-RITN 1520
            P GIQQ  GS+SNGR+ I                   GVTN GG GV P +GNTG RIT+
Sbjct: 82   PGGIQQPTGSLSNGRFPINHLPTALSQLSHASSHGHPGVTNRGGSGVSPMLGNTGPRITS 141

Query: 1519 SIGGLVGGGNTSRGASSTGVANIPPGLASRLNLT----------------------APQV 1406
            SIG L GGGN  R  SS G   +P GLAS L+L                       APQV
Sbjct: 142  SIGNLAGGGNIGRSLSSGGGLAMP-GLASHLSLISNGSGNMGIQGSNRLMGGVLSQAPQV 200

Query: 1405 VSMLNNSYSGAGVPLSQNQFQAGNNNFSFMALLNDSNAHDNATFDVNDFPQLSGRPPSAG 1226
            +SML NSYS  G   SQNQ QAGNN+ + MALL D + H+NA FD+NDFPQL+  P SAG
Sbjct: 201  ISMLGNSYSSVGGLRSQNQVQAGNNHLTSMALLKDLSVHENAPFDINDFPQLTAHPNSAG 260

Query: 1225 GSHGQIGLMQKHNIGFAQQNQEFSIQNEDFPALPGYKGGLNVGGSAEYTINAHQKEQIHD 1046
             S GQ+G ++K ++G   QNQEFSIQNEDFPALPG+KGG     + ++ +++H+KEQ+HD
Sbjct: 261  SSQGQLGSLRKQSVGVVHQNQEFSIQNEDFPALPGFKGG-----NTDFPVDSHRKEQLHD 315

Query: 1045 SMANLMQPQQLSMGRASGFNFGGSYSSH-HPQQHRASSINGTGVSYL----TSGNQDLHF 881
            S  ++MQ Q   MGR+ GFN G  YSSH   QQ  ASS+   G   +     + +  +  
Sbjct: 316  SAVSMMQSQHFPMGRSGGFNLGVPYSSHLQQQQQHASSVGSGGPPSIGLRPMNSSNTISG 375

Query: 880  HGPEXXXXXXXXQTRFINSFR-----------DKDMKSTQGSQSLPDQYGMLGLLSIIKM 734
             GP         Q +  + FR           D+D+KS Q  + + D++G+ GLL +I+M
Sbjct: 376  VGPYDQLIQQYQQLQSQSQFRMGQISAVGPHGDQDLKS-QSPEPVIDEFGLRGLLKVIRM 434

Query: 733  VNPALTSLALGIDLTTLGLNLNSSETLHKKFASPWSDEPVRGEPEYSVPECYYAKQTPPL 554
             NP LTSLALGIDLTTLGLNLN+S+ LHK+FASPW++EP +GEP+YS+PECYYAKQ P L
Sbjct: 435  NNPDLTSLALGIDLTTLGLNLNASDDLHKRFASPWAEEPHKGEPQYSIPECYYAKQPPVL 494

Query: 553  KQSYFARFRPETLFYIFYSMPKDEAQLFAASELYNRGWFYHRELRLWFTRVKNMEPLVKT 374
             Q++FA+   ETLFYIFYSMP++EAQL+AA EL+ RGWFYH+E RLW TR  +M+PLV+T
Sbjct: 495  NQAHFAKLHLETLFYIFYSMPREEAQLYAAHELHARGWFYHKEQRLWLTRNASMKPLVET 554

Query: 373  NSYERGCYFCFDPNTWQTARKDNFVLQYEMVEKRPALPQ 257
            NSYERG Y CFDPNTW+TA KDNF+LQ+EM+EK+P LPQ
Sbjct: 555  NSYERGSYLCFDPNTWETACKDNFILQFEMIEKKPDLPQ 593


>emb|CBI34721.3| unnamed protein product [Vitis vinifera]
          Length = 595

 Score =  583 bits (1502), Expect = 0.0
 Identities = 312/580 (53%), Positives = 388/580 (66%), Gaps = 40/580 (6%)
 Frame = -2

Query: 1876 PDNTGRAFATSFSAQSGSSGAVLNQSGGNIQGLHNIHGSFNMSNMPGTYASRNSANLGGL 1697
            PD TGR+F TSFSAQSGS+ A  +   G IQGLHNIHGSFN+ NMPG+ ASRNS   GG 
Sbjct: 24   PDTTGRSFTTSFSAQSGSAAAFNHL--GTIQGLHNIHGSFNIPNMPGSLASRNSTINGGH 81

Query: 1696 PNGIQQAPGSVSNGRYAIXXXXXXXXXXXXXXXXXXXGVTNTGGPGVLPNMGNTG-RITN 1520
            P GIQQ  GS+SNGR+ I                   GVTN GG GV P +GNTG RIT+
Sbjct: 82   PGGIQQPTGSLSNGRFPINHLPTALSQLSHASSHGHPGVTNRGGSGVSPMLGNTGPRITS 141

Query: 1519 SIGGLVGGGNTSRGASSTGVANIPPGLASRLNLTA-----------------------PQ 1409
            SIG L GGGN  R  SS G   +P GLAS L+L +                       PQ
Sbjct: 142  SIGNLAGGGNIGRSLSSGGGLAMP-GLASHLSLISNGSGNMGIQGSNRLMGGVLSQGTPQ 200

Query: 1408 VVSMLNNSYSGAGVPLSQNQFQAGNNNFSFMALLNDSNAHDNATFDVNDFPQLSGRPPSA 1229
            V+SML NSYS  G   SQNQ QAGNN+ + MALL D + H+NA FD+NDFPQL+  P SA
Sbjct: 201  VISMLGNSYSSVGGLRSQNQVQAGNNHLTSMALLKDLSVHENAPFDINDFPQLTAHPNSA 260

Query: 1228 GGSHGQIGLMQKHNIGFAQQNQEFSIQNEDFPALPGYKGGLNVGGSAEYTINAHQKEQIH 1049
            G S GQ+G ++K ++G   QNQEFSIQNEDFPALPG+KGG     + ++ +++H+KEQ+H
Sbjct: 261  GSSQGQLGSLRKQSVGVVHQNQEFSIQNEDFPALPGFKGG-----NTDFPVDSHRKEQLH 315

Query: 1048 DSMANLMQPQQLSMGRASGFNFGGSYSSH-HPQQHRASSINGTGVSYL----TSGNQDLH 884
            DS  ++MQ Q   MGR+ GFN G  YSSH   QQ  ASS+   G   +     + +  + 
Sbjct: 316  DSAVSMMQSQHFPMGRSGGFNLGVPYSSHLQQQQQHASSVGSGGPPSIGLRPMNSSNTIS 375

Query: 883  FHGPEXXXXXXXXQTRFINSFR-----------DKDMKSTQGSQSLPDQYGMLGLLSIIK 737
              GP         Q +  + FR           D+D+KS Q  + + D++G+ GLL +I+
Sbjct: 376  GVGPYDQLIQQYQQLQSQSQFRMGQISAVGPHGDQDLKS-QSPEPVIDEFGLRGLLKVIR 434

Query: 736  MVNPALTSLALGIDLTTLGLNLNSSETLHKKFASPWSDEPVRGEPEYSVPECYYAKQTPP 557
            M NP LTSLALGIDLTTLGLNLN+S+ LHK+FASPW++EP +GEP+YS+PECYYAKQ P 
Sbjct: 435  MNNPDLTSLALGIDLTTLGLNLNASDDLHKRFASPWAEEPHKGEPQYSIPECYYAKQPPV 494

Query: 556  LKQSYFARFRPETLFYIFYSMPKDEAQLFAASELYNRGWFYHRELRLWFTRVKNMEPLVK 377
            L Q++FA+   ETLFYIFYSMP++EAQL+AA EL+ RGWFYH+E RLW TR  +M+PLV+
Sbjct: 495  LNQAHFAKLHLETLFYIFYSMPREEAQLYAAHELHARGWFYHKEQRLWLTRNASMKPLVE 554

Query: 376  TNSYERGCYFCFDPNTWQTARKDNFVLQYEMVEKRPALPQ 257
            TNSYERG Y CFDPNTW+TA KDNF+LQ+EM+EK+P LPQ
Sbjct: 555  TNSYERGSYLCFDPNTWETACKDNFILQFEMIEKKPDLPQ 594


>ref|XP_015165686.1| PREDICTED: probable NOT transcription complex subunit VIP2 isoform X5
            [Solanum tuberosum]
          Length = 621

 Score =  559 bits (1440), Expect = 0.0
 Identities = 312/616 (50%), Positives = 389/616 (63%), Gaps = 76/616 (12%)
 Frame = -2

Query: 1876 PDNTGRAFATSFSAQSGSSGAVLNQSGGNIQGLHNIHGSFNMSNMPGTYASRNSANLGGL 1697
            PDN+GR+F +SFS QSG++  + + SG +IQGLHN+HGSFN+ NMPGT  SRN+A     
Sbjct: 17   PDNSGRSFPSSFSPQSGAASPLYHHSG-SIQGLHNVHGSFNVPNMPGTLGSRNTAINNVP 75

Query: 1696 PNGIQQAPGSVSNGRYAIXXXXXXXXXXXXXXXXXXXGVTNTGG---------------- 1565
             +G+QQ+  S+S GR+A                    G+T+ GG                
Sbjct: 76   TSGVQQSGNSLSGGRFASNNIPVALSQISQGSSHGHSGMTSRGGMSVVGNPGYSSNNNGV 135

Query: 1564 ----PGVLPN------------------MGNTG-RITNSIGGLVGGGNTSRGASSTGVAN 1454
                PG+LP                   +GN G R++NS+G +VGGGN  R  SS G   
Sbjct: 136  GGSIPGILPTSAAIGNRSSVQGLGMSTILGNAGPRMSNSVGNIVGGGNIGRNISS-GAGL 194

Query: 1453 IPPGLASRLNLTA----------------------PQVVSMLNNSYSGAGVPLSQNQFQA 1340
              PGL SRLNLTA                         +SM  NSY   G PLSQN  QA
Sbjct: 195  SVPGLGSRLNLTANTGSGNLNVQGSNRLMGGVLQQASPMSMFGNSYPTGGGPLSQNHVQA 254

Query: 1339 GNNNFSFMALLNDSNAHDNATFDVNDFPQLSGRPPSAGGSHGQIGLMQKHNIGFAQQNQE 1160
              N  + M +LND N++D + FD+NDFPQLS RP SAGG  GQ+G ++K     AQQNQE
Sbjct: 255  VGN-LNSMGMLNDVNSNDGSPFDINDFPQLSSRPSSAGGPQGQLGSLRKQ---IAQQNQE 310

Query: 1159 FSIQNEDFPALPGYKGGLNVGGSAEYTINAHQKEQIHDSMANLMQPQQLSMGRASGFNFG 980
            FSIQNEDFPALPG+KGG     +A+Y ++ HQKEQ+HD+  ++MQ Q  SMGR+ GFN G
Sbjct: 311  FSIQNEDFPALPGFKGG-----NADYAMDLHQKEQLHDNTISMMQQQHFSMGRSGGFNLG 365

Query: 979  GSYSS---HHPQQHRASSINGTG-----------VSYLTSGNQDLHFHGPEXXXXXXXXQ 842
            G+YSS      QQH +SS    G           VS + S +Q +  +  +         
Sbjct: 366  GTYSSLRSQQQQQHASSSGGPPGIGLRPLNSPSTVSGIGSYDQLIQQYQQQTQSQYRLPH 425

Query: 841  TRFINS-FRDKDMKSTQGSQSLPDQYGMLGLLSIIKMVNPALTSLALGIDLTTLGLNLNS 665
               I   +R++ MKS Q +Q+ PD +GMLGLLS+I+M +P LTSLALGIDLTTLGLNLNS
Sbjct: 426  MSAIGQPYREQGMKSMQ-AQAAPDPFGMLGLLSVIRMSDPDLTSLALGIDLTTLGLNLNS 484

Query: 664  SETLHKKFASPWSDEPVRGEPEYSVPECYYAKQTPPLKQSYFARFRPETLFYIFYSMPKD 485
            +E LHK F SPWSDEP +G+PE++VP+CYYAKQ PPL Q+YF++ + +TLFYIFYSMPKD
Sbjct: 485  AENLHKTFGSPWSDEPAKGDPEFTVPQCYYAKQPPPLNQAYFSKLQLDTLFYIFYSMPKD 544

Query: 484  EAQLFAASELYNRGWFYHRELRLWFTRVKNMEPLVKTNSYERGCYFCFDPNTWQTARKDN 305
            EAQL+AA+ELYNRGWFYHRE RLWF RV N+EPLVKTN+YERG Y CFDPNTW+T RKDN
Sbjct: 545  EAQLYAANELYNRGWFYHREHRLWFMRVANLEPLVKTNAYERGSYICFDPNTWETIRKDN 604

Query: 304  FVLQYEMVEKRPALPQ 257
            FVL YEM+EKRP LPQ
Sbjct: 605  FVLHYEMLEKRPVLPQ 620


>ref|XP_015079402.1| PREDICTED: probable NOT transcription complex subunit VIP2 isoform X4
            [Solanum pennellii]
          Length = 621

 Score =  557 bits (1436), Expect = 0.0
 Identities = 312/616 (50%), Positives = 386/616 (62%), Gaps = 76/616 (12%)
 Frame = -2

Query: 1876 PDNTGRAFATSFSAQSGSSGAVLNQSGGNIQGLHNIHGSFNMSNMPGTYASRNSANLGGL 1697
            PDN+GR+F +SFS QSG++  + + SG NIQGLHN+HGSF++ NMPGT  SRN+A     
Sbjct: 17   PDNSGRSFPSSFSPQSGAASPLYHHSG-NIQGLHNVHGSFSVPNMPGTLGSRNTAINNVP 75

Query: 1696 PNGIQQAPGSVSNGRYAIXXXXXXXXXXXXXXXXXXXGVTNTGG---------------- 1565
             +G+QQ+  S+S GR+A                    G+T+ GG                
Sbjct: 76   SSGVQQSGNSLSGGRFASNNIPVALSQISQGSSHGHSGMTSRGGMSVVGNQGYSSNNNGV 135

Query: 1564 ----PGVLPN------------------MGNTG-RITNSIGGLVGGGNTSRGASSTGVAN 1454
                PG+LP                   +GN G R++NS+G +VGGGN  R  SS G   
Sbjct: 136  GGSIPGILPTSAAIGNRSSVQGLGMSTILGNAGPRMSNSVGNIVGGGNIGRNISS-GAGL 194

Query: 1453 IPPGLASRLNLTA----------------------PQVVSMLNNSYSGAGVPLSQNQFQA 1340
              PGL SRLNLTA                         +SM  NSY   G PLSQN  Q 
Sbjct: 195  SVPGLGSRLNLTANTGSGNLNVQGSNRLMGGVLQQASPMSMFGNSYPSGGGPLSQNHVQV 254

Query: 1339 GNNNFSFMALLNDSNAHDNATFDVNDFPQLSGRPPSAGGSHGQIGLMQKHNIGFAQQNQE 1160
              N  + M +LND N++D + FD+NDFPQLS RP SAGG  G +G ++K     AQQNQE
Sbjct: 255  VGN-LNSMGMLNDVNSNDGSPFDINDFPQLSSRPSSAGGPQGPLGSLRKQ---MAQQNQE 310

Query: 1159 FSIQNEDFPALPGYKGGLNVGGSAEYTINAHQKEQIHDSMANLMQPQQLSMGRASGFNFG 980
            FSIQNEDFPALPG+KGG     +A+Y ++ HQKEQ+HD+  ++MQ Q  SMGR+ GFN G
Sbjct: 311  FSIQNEDFPALPGFKGG-----NADYPMDLHQKEQLHDNTISMMQQQHFSMGRSGGFNLG 365

Query: 979  GSYSS---HHPQQHRASSIN--GTGVSYLTSGNQDLHFHGPEXXXXXXXXQTR------- 836
            G+YSS      QQH +SS    G G+  L S N        +        QT+       
Sbjct: 366  GTYSSLRSQQQQQHASSSGGPPGIGLRPLNSSNTVSGIGSYDQLIQQYQQQTQSQYRLPH 425

Query: 835  ---FINSFRDKDMKSTQGSQSLPDQYGMLGLLSIIKMVNPALTSLALGIDLTTLGLNLNS 665
                   +RD+ MKS Q +Q+ PD +GMLGLLS+I+M +P LTSLALGIDLTTLGLNLNS
Sbjct: 426  MSAIGQPYRDQGMKSMQ-AQTAPDPFGMLGLLSVIRMSDPDLTSLALGIDLTTLGLNLNS 484

Query: 664  SETLHKKFASPWSDEPVRGEPEYSVPECYYAKQTPPLKQSYFARFRPETLFYIFYSMPKD 485
            +E LHK F SPWSDEP +G+PE++VP+CYYAKQ PPL Q+YF++ + +TLFYIFYSMPKD
Sbjct: 485  AENLHKTFGSPWSDEPAKGDPEFTVPQCYYAKQPPPLNQAYFSKLQLDTLFYIFYSMPKD 544

Query: 484  EAQLFAASELYNRGWFYHRELRLWFTRVKNMEPLVKTNSYERGCYFCFDPNTWQTARKDN 305
            EAQL+AA+ELYNRGWFYHRE RLWF RV N+EPLVKTN+YERG Y CFDPNTW+T RKDN
Sbjct: 545  EAQLYAANELYNRGWFYHREHRLWFMRVANLEPLVKTNAYERGSYICFDPNTWETIRKDN 604

Query: 304  FVLQYEMVEKRPALPQ 257
            FVL YEM+EKRP LPQ
Sbjct: 605  FVLHYEMLEKRPVLPQ 620


>ref|XP_010322383.1| PREDICTED: probable NOT transcription complex subunit VIP2 isoform X6
            [Solanum lycopersicum]
          Length = 645

 Score =  556 bits (1434), Expect = 0.0
 Identities = 312/616 (50%), Positives = 386/616 (62%), Gaps = 76/616 (12%)
 Frame = -2

Query: 1876 PDNTGRAFATSFSAQSGSSGAVLNQSGGNIQGLHNIHGSFNMSNMPGTYASRNSANLGGL 1697
            PDN+GR+F +SFS QSG++  + + SG NIQGLHN+HGSF++ NMPGT  SRN+A     
Sbjct: 41   PDNSGRSFPSSFSPQSGAASPLYHHSG-NIQGLHNVHGSFSVPNMPGTLGSRNTAINNVP 99

Query: 1696 PNGIQQAPGSVSNGRYAIXXXXXXXXXXXXXXXXXXXGVTNTGG---------------- 1565
             +G+QQ+  S+S GR+A                    G+T+ GG                
Sbjct: 100  SSGVQQSGNSLSGGRFASNNIPVALSQISQGSSHGHSGMTSRGGMSVVGNQGYSSNNNGV 159

Query: 1564 ----PGVLPN------------------MGNTG-RITNSIGGLVGGGNTSRGASSTGVAN 1454
                PG+LP                   +GN G R++NS+G +VGGGN  R  SS G   
Sbjct: 160  GGSIPGILPTSAAIGNRSSVQGLGMSTILGNAGPRMSNSVGNIVGGGNIGRNISS-GAGL 218

Query: 1453 IPPGLASRLNLTA----------------------PQVVSMLNNSYSGAGVPLSQNQFQA 1340
              PGL +RLNLTA                         +SM  NSY   G PLSQN  QA
Sbjct: 219  SVPGLGTRLNLTANTGSGNLNVQGSNRLMGGVLQQASPMSMFGNSYPSGGGPLSQNHVQA 278

Query: 1339 GNNNFSFMALLNDSNAHDNATFDVNDFPQLSGRPPSAGGSHGQIGLMQKHNIGFAQQNQE 1160
              N  + M +LND N++D + FD+NDFPQLS RP SAGG  G +G ++K     AQQNQE
Sbjct: 279  VGN-LNSMGMLNDVNSNDGSPFDINDFPQLSSRPSSAGGPQGPLGSLRKQ---MAQQNQE 334

Query: 1159 FSIQNEDFPALPGYKGGLNVGGSAEYTINAHQKEQIHDSMANLMQPQQLSMGRASGFNFG 980
            FSIQNEDFPALPG+KGG     +A+Y ++ HQKEQ+HD+  ++MQ Q  SMGR+ GFN G
Sbjct: 335  FSIQNEDFPALPGFKGG-----NADYPMDLHQKEQLHDNTISMMQQQHFSMGRSGGFNLG 389

Query: 979  GSYSS---HHPQQHRASSIN--GTGVSYLTSGNQDLHFHGPEXXXXXXXXQTR------- 836
            G+YSS      QQH +SS    G G+  L S N        +        QT+       
Sbjct: 390  GTYSSLRSQQQQQHASSSGGPPGIGLRPLNSSNTVSGIGSYDQLIQQYQQQTQSQYRLPH 449

Query: 835  ---FINSFRDKDMKSTQGSQSLPDQYGMLGLLSIIKMVNPALTSLALGIDLTTLGLNLNS 665
                   +RD+ MKS Q +Q+ PD +GMLGLLS+I+M +P LTSLALGIDLTTLGLNLNS
Sbjct: 450  MSAIGQPYRDQGMKSMQ-AQTAPDPFGMLGLLSVIRMSDPDLTSLALGIDLTTLGLNLNS 508

Query: 664  SETLHKKFASPWSDEPVRGEPEYSVPECYYAKQTPPLKQSYFARFRPETLFYIFYSMPKD 485
            +E LHK F SPWSDEP +G+PE++VP+CYYAKQ PPL Q+YF++ + +TLFYIFYSMPKD
Sbjct: 509  AENLHKTFGSPWSDEPAKGDPEFTVPQCYYAKQPPPLNQAYFSKLQLDTLFYIFYSMPKD 568

Query: 484  EAQLFAASELYNRGWFYHRELRLWFTRVKNMEPLVKTNSYERGCYFCFDPNTWQTARKDN 305
            EAQL+AA ELYNRGWFYHRE RLWF RV N+EPLVKTN+YERG Y CFDPNTW+T RKDN
Sbjct: 569  EAQLYAAYELYNRGWFYHREHRLWFMRVANLEPLVKTNAYERGSYICFDPNTWETIRKDN 628

Query: 304  FVLQYEMVEKRPALPQ 257
            FVL YEM+EKRP LPQ
Sbjct: 629  FVLHYEMLEKRPVLPQ 644


>ref|XP_015079401.1| PREDICTED: probable NOT transcription complex subunit VIP2 isoform X3
            [Solanum pennellii]
          Length = 623

 Score =  552 bits (1423), Expect = 0.0
 Identities = 312/618 (50%), Positives = 386/618 (62%), Gaps = 78/618 (12%)
 Frame = -2

Query: 1876 PDNTGRAFATSFSAQSGSSGAVLNQSGGNIQGLHNIHGSFNMSNMPGTYASRNSANLGGL 1697
            PDN+GR+F +SFS QSG++  + + SG NIQGLHN+HGSF++ NMPGT  SRN+A     
Sbjct: 17   PDNSGRSFPSSFSPQSGAASPLYHHSG-NIQGLHNVHGSFSVPNMPGTLGSRNTAINNVP 75

Query: 1696 PNGIQQAPGSVSNGRYAIXXXXXXXXXXXXXXXXXXXGVTNTGG---------------- 1565
             +G+QQ+  S+S GR+A                    G+T+ GG                
Sbjct: 76   SSGVQQSGNSLSGGRFASNNIPVALSQISQGSSHGHSGMTSRGGMSVVGNQGYSSNNNGV 135

Query: 1564 ----PGVLPN------------------MGNTG-RITNSIGGLVGGGNTSRGASSTGVAN 1454
                PG+LP                   +GN G R++NS+G +VGGGN  R  SS G   
Sbjct: 136  GGSIPGILPTSAAIGNRSSVQGLGMSTILGNAGPRMSNSVGNIVGGGNIGRNISS-GAGL 194

Query: 1453 IPPGLASRLNLTA----------------------PQVVSMLNNSYSGAGVPLSQNQFQA 1340
              PGL SRLNLTA                         +SM  NSY   G PLSQN  Q 
Sbjct: 195  SVPGLGSRLNLTANTGSGNLNVQGSNRLMGGVLQQASPMSMFGNSYPSGGGPLSQNHVQV 254

Query: 1339 GNNNFSFMALLNDSNAHDNATFDVNDFPQLSGRPPSAGGSHGQIGLMQKHNIGFAQQNQE 1160
              N  + M +LND N++D + FD+NDFPQLS RP SAGG  G +G ++K     AQQNQE
Sbjct: 255  VGN-LNSMGMLNDVNSNDGSPFDINDFPQLSSRPSSAGGPQGPLGSLRKQ---MAQQNQE 310

Query: 1159 FSIQNEDFPALPGYKGGLNVGGSAEYTINAHQKEQIHDSMANLMQPQQLS--MGRASGFN 986
            FSIQNEDFPALPG+KGG     +A+Y ++ HQKEQ+HD+  ++MQ Q  S  MGR+ GFN
Sbjct: 311  FSIQNEDFPALPGFKGG-----NADYPMDLHQKEQLHDNTISMMQQQHFSAQMGRSGGFN 365

Query: 985  FGGSYSS---HHPQQHRASSIN--GTGVSYLTSGNQDLHFHGPEXXXXXXXXQTR----- 836
             GG+YSS      QQH +SS    G G+  L S N        +        QT+     
Sbjct: 366  LGGTYSSLRSQQQQQHASSSGGPPGIGLRPLNSSNTVSGIGSYDQLIQQYQQQTQSQYRL 425

Query: 835  -----FINSFRDKDMKSTQGSQSLPDQYGMLGLLSIIKMVNPALTSLALGIDLTTLGLNL 671
                     +RD+ MKS Q +Q+ PD +GMLGLLS+I+M +P LTSLALGIDLTTLGLNL
Sbjct: 426  PHMSAIGQPYRDQGMKSMQ-AQTAPDPFGMLGLLSVIRMSDPDLTSLALGIDLTTLGLNL 484

Query: 670  NSSETLHKKFASPWSDEPVRGEPEYSVPECYYAKQTPPLKQSYFARFRPETLFYIFYSMP 491
            NS+E LHK F SPWSDEP +G+PE++VP+CYYAKQ PPL Q+YF++ + +TLFYIFYSMP
Sbjct: 485  NSAENLHKTFGSPWSDEPAKGDPEFTVPQCYYAKQPPPLNQAYFSKLQLDTLFYIFYSMP 544

Query: 490  KDEAQLFAASELYNRGWFYHRELRLWFTRVKNMEPLVKTNSYERGCYFCFDPNTWQTARK 311
            KDEAQL+AA+ELYNRGWFYHRE RLWF RV N+EPLVKTN+YERG Y CFDPNTW+T RK
Sbjct: 545  KDEAQLYAANELYNRGWFYHREHRLWFMRVANLEPLVKTNAYERGSYICFDPNTWETIRK 604

Query: 310  DNFVLQYEMVEKRPALPQ 257
            DNFVL YEM+EKRP LPQ
Sbjct: 605  DNFVLHYEMLEKRPVLPQ 622


>ref|XP_007042502.1| DNA-directed RNA polymerase family protein [Theobroma cacao]
            gi|508706437|gb|EOX98333.1| DNA-directed RNA polymerase
            family protein [Theobroma cacao]
          Length = 318

 Score =  534 bits (1375), Expect = e-178
 Identities = 271/319 (84%), Positives = 291/319 (91%)
 Frame = +2

Query: 2147 MEGVSYQRFPKIKIRTVRDDFMKFELRETDASIANALRRVMIAEVPTIAIDLVEIEVNSS 2326
            MEGVSYQRFPK+KIR ++DD+ KFELR+TDAS+ANALRRVMIAEVPTIAIDLVEIEVNSS
Sbjct: 1    MEGVSYQRFPKVKIRELKDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSS 60

Query: 2327 VLNDEFIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLRAKCINDQTLDV 2506
            VLNDEFIAHRLGLIPLTSERAM+MRFSRDCDACDGDGQCE+CSVEFHLRAKC+ DQTLDV
Sbjct: 61   VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCMTDQTLDV 120

Query: 2507 TSKDLYSSDHTVVPVDFPDSSTGLDNADNRGIIIVKLRRGQELGLRAIARKGIGKDHAKW 2686
            TSKDLYSSDHTVVPVDF DS+ G D+++ RGIIIVKLRRGQEL LRAIARKGIGKDHAKW
Sbjct: 121  TSKDLYSSDHTVVPVDFTDSA-GYDSSEQRGIIIVKLRRGQELRLRAIARKGIGKDHAKW 179

Query: 2687 SPAATVTFMYEPEIYINXXXXXXXXXXXXXXFVESSPTKVFDINANTQQVYIYDAEAYTY 2866
            SPAATVTFMYEPEI+IN              FVESSPT+VFDI+ NTQQV + D EAYTY
Sbjct: 180  SPAATVTFMYEPEIHINEDMMETLTLEEKQSFVESSPTRVFDIDPNTQQVVVVDPEAYTY 239

Query: 2867 DDEVLKKAEAMGKPGLVEIHAKEDSFIFTVETTGAIKASQLFLNAIEVLKQKLDAVRLSA 3046
            DDEVLKKAEAMGKPGLVEI+AKEDSFIFTVE+TGAIKASQL LNAIEVLKQKLDAVRLS 
Sbjct: 240  DDEVLKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQLVLNAIEVLKQKLDAVRLSE 299

Query: 3047 DTVEADEQFGELGAHMRGG 3103
            DTVEAD+QFGELGAHMRGG
Sbjct: 300  DTVEADDQFGELGAHMRGG 318


>ref|XP_002285322.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3 [Vitis
            vinifera] gi|731383801|ref|XP_010647901.1| PREDICTED:
            DNA-directed RNA polymerases II, IV and V subunit 3
            [Vitis vinifera]
          Length = 318

 Score =  534 bits (1375), Expect = e-178
 Identities = 273/319 (85%), Positives = 292/319 (91%)
 Frame = +2

Query: 2147 MEGVSYQRFPKIKIRTVRDDFMKFELRETDASIANALRRVMIAEVPTIAIDLVEIEVNSS 2326
            MEGVSYQRFPKIKIR V+DD+ KFELRETDAS+ANALRRVMIAEVPT+AIDLVEIEVNSS
Sbjct: 1    MEGVSYQRFPKIKIREVKDDYAKFELRETDASMANALRRVMIAEVPTVAIDLVEIEVNSS 60

Query: 2327 VLNDEFIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLRAKCINDQTLDV 2506
            VLNDEFIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCE+CSVEFHLRAKC+ D+TLDV
Sbjct: 61   VLNDEFIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEFCSVEFHLRAKCMTDETLDV 120

Query: 2507 TSKDLYSSDHTVVPVDFPDSSTGLDNADNRGIIIVKLRRGQELGLRAIARKGIGKDHAKW 2686
            TSKDL SSDHTVVPVDF DSS G D+AD +GIIIVKLRRGQEL LRAIARKGIGKDHAKW
Sbjct: 121  TSKDLISSDHTVVPVDFSDSS-GYDSADKKGIIIVKLRRGQELRLRAIARKGIGKDHAKW 179

Query: 2687 SPAATVTFMYEPEIYINXXXXXXXXXXXXXXFVESSPTKVFDINANTQQVYIYDAEAYTY 2866
            SPAATVTFMYEPEI+IN              +VESSPTKVFDI+A++QQV + DAEAYTY
Sbjct: 180  SPAATVTFMYEPEIHINEDLMESLTLEEKTSWVESSPTKVFDIDASSQQVVVADAEAYTY 239

Query: 2867 DDEVLKKAEAMGKPGLVEIHAKEDSFIFTVETTGAIKASQLFLNAIEVLKQKLDAVRLSA 3046
            DDEVLKKAEAMGKPGLVEI+AKEDSFIFTVE+TGAIKASQL LNAI+VLKQKLDAVRLS 
Sbjct: 240  DDEVLKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQLVLNAIDVLKQKLDAVRLSE 299

Query: 3047 DTVEADEQFGELGAHMRGG 3103
            DTVEAD+QFGELGAHMRGG
Sbjct: 300  DTVEADDQFGELGAHMRGG 318


>emb|CAN60923.1| hypothetical protein VITISV_019338 [Vitis vinifera]
          Length = 318

 Score =  533 bits (1372), Expect = e-178
 Identities = 272/319 (85%), Positives = 292/319 (91%)
 Frame = +2

Query: 2147 MEGVSYQRFPKIKIRTVRDDFMKFELRETDASIANALRRVMIAEVPTIAIDLVEIEVNSS 2326
            MEGVSYQRFPKIKIR V+DD+ KFELRETDAS+ANALRRVMIAEVPT+AIDLVEIEVNSS
Sbjct: 1    MEGVSYQRFPKIKIREVKDDYAKFELRETDASMANALRRVMIAEVPTVAIDLVEIEVNSS 60

Query: 2327 VLNDEFIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLRAKCINDQTLDV 2506
            VLNDEFIAHRLGLIPLTSERAM+MRFSRDCDACDGDGQCE+CSVEFHLRAKC+ D+TLDV
Sbjct: 61   VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCMTDETLDV 120

Query: 2507 TSKDLYSSDHTVVPVDFPDSSTGLDNADNRGIIIVKLRRGQELGLRAIARKGIGKDHAKW 2686
            TSKDL SSDHTVVPVDF DSS G D+AD +GIIIVKLRRGQEL LRAIARKGIGKDHAKW
Sbjct: 121  TSKDLISSDHTVVPVDFSDSS-GYDSADKKGIIIVKLRRGQELRLRAIARKGIGKDHAKW 179

Query: 2687 SPAATVTFMYEPEIYINXXXXXXXXXXXXXXFVESSPTKVFDINANTQQVYIYDAEAYTY 2866
            SPAATVTFMYEPEI+IN              +VESSPTKVFDI+A++QQV + DAEAYTY
Sbjct: 180  SPAATVTFMYEPEIHINEDLMESLTLEEKTSWVESSPTKVFDIDASSQQVVVADAEAYTY 239

Query: 2867 DDEVLKKAEAMGKPGLVEIHAKEDSFIFTVETTGAIKASQLFLNAIEVLKQKLDAVRLSA 3046
            DDEVLKKAEAMGKPGLVEI+AKEDSFIFTVE+TGAIKASQL LNAI+VLKQKLDAVRLS 
Sbjct: 240  DDEVLKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQLVLNAIDVLKQKLDAVRLSE 299

Query: 3047 DTVEADEQFGELGAHMRGG 3103
            DTVEAD+QFGELGAHMRGG
Sbjct: 300  DTVEADDQFGELGAHMRGG 318


>ref|XP_012436162.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3
            [Gossypium raimondii] gi|728821384|gb|KHG04309.1|
            DNA-directed RNA polymerase II subunit RPB3-A -like
            protein [Gossypium arboreum] gi|763780305|gb|KJB47376.1|
            hypothetical protein B456_008G023500 [Gossypium
            raimondii]
          Length = 318

 Score =  532 bits (1371), Expect = e-178
 Identities = 269/319 (84%), Positives = 291/319 (91%)
 Frame = +2

Query: 2147 MEGVSYQRFPKIKIRTVRDDFMKFELRETDASIANALRRVMIAEVPTIAIDLVEIEVNSS 2326
            MEG+SYQRFPK+KIR ++DD+ KFELR+TDAS+ANALRRVMI+EVPTIAIDLVEIEVNSS
Sbjct: 1    MEGISYQRFPKVKIRELKDDYAKFELRDTDASMANALRRVMISEVPTIAIDLVEIEVNSS 60

Query: 2327 VLNDEFIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLRAKCINDQTLDV 2506
            VLNDEFIAHRLGLIPLTSERAM+MRFSRDCDACDGDGQCE+CSVEFHLRAKCI+DQTLDV
Sbjct: 61   VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCISDQTLDV 120

Query: 2507 TSKDLYSSDHTVVPVDFPDSSTGLDNADNRGIIIVKLRRGQELGLRAIARKGIGKDHAKW 2686
            TSKDLYSSDHTVVPVDF D++ G D+ + RGIIIVKLRRGQEL LRAIARKGIGKDHAKW
Sbjct: 121  TSKDLYSSDHTVVPVDFTDNA-GYDSTEPRGIIIVKLRRGQELRLRAIARKGIGKDHAKW 179

Query: 2687 SPAATVTFMYEPEIYINXXXXXXXXXXXXXXFVESSPTKVFDINANTQQVYIYDAEAYTY 2866
            SPAATVTFMYEPEI+IN              FVESSPTKVFDI+ NTQQV + D EAYTY
Sbjct: 180  SPAATVTFMYEPEIHINEDLMESLTLEEKLSFVESSPTKVFDIDPNTQQVVVVDPEAYTY 239

Query: 2867 DDEVLKKAEAMGKPGLVEIHAKEDSFIFTVETTGAIKASQLFLNAIEVLKQKLDAVRLSA 3046
            DDEVLKKAEAMGKPGLVEI+AKEDSFIFTVE+TGAIKASQL LNAIE+LKQKLDAVRLS 
Sbjct: 240  DDEVLKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQLVLNAIEILKQKLDAVRLSE 299

Query: 3047 DTVEADEQFGELGAHMRGG 3103
            DTVEAD+QFGELGAHMRGG
Sbjct: 300  DTVEADDQFGELGAHMRGG 318


>ref|XP_006348609.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3-like
            [Solanum tuberosum]
          Length = 319

 Score =  532 bits (1371), Expect = e-178
 Identities = 268/319 (84%), Positives = 286/319 (89%)
 Frame = +2

Query: 2147 MEGVSYQRFPKIKIRTVRDDFMKFELRETDASIANALRRVMIAEVPTIAIDLVEIEVNSS 2326
            MEGVSYQRFPKIKIR V+DDFMKFELRETDASIANALRR+MIAEVPTIAIDLVEIEVNSS
Sbjct: 1    MEGVSYQRFPKIKIREVKDDFMKFELRETDASIANALRRIMIAEVPTIAIDLVEIEVNSS 60

Query: 2327 VLNDEFIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLRAKCINDQTLDV 2506
            VLNDEFI+HRLGL+PLTSERAM+MRFSRDCDACDGDGQCEYCSVEF+LR KC++DQTLDV
Sbjct: 61   VLNDEFISHRLGLVPLTSERAMSMRFSRDCDACDGDGQCEYCSVEFYLRVKCLSDQTLDV 120

Query: 2507 TSKDLYSSDHTVVPVDFPDSSTGLDNADNRGIIIVKLRRGQELGLRAIARKGIGKDHAKW 2686
            TSKDL SSDHTVVPVD+ D+S+  DN  N+GIIIVKLRRGQEL LRAIARKGIGKDHAKW
Sbjct: 121  TSKDLLSSDHTVVPVDYSDTSSSFDNTPNKGIIIVKLRRGQELRLRAIARKGIGKDHAKW 180

Query: 2687 SPAATVTFMYEPEIYINXXXXXXXXXXXXXXFVESSPTKVFDINANTQQVYIYDAEAYTY 2866
            SPAATVTFMYEPEIYIN               VESSPTKVF I+   +QV + D EAYTY
Sbjct: 181  SPAATVTFMYEPEIYINEDMMESLTLEEKTELVESSPTKVFGIDPENKQVIVVDPEAYTY 240

Query: 2867 DDEVLKKAEAMGKPGLVEIHAKEDSFIFTVETTGAIKASQLFLNAIEVLKQKLDAVRLSA 3046
            DDEVLKKAEAMGKPG+VEIHAKEDSFIFTVETTGA+KASQL LNAIEVLKQKLDAVRLS 
Sbjct: 241  DDEVLKKAEAMGKPGVVEIHAKEDSFIFTVETTGAVKASQLVLNAIEVLKQKLDAVRLSD 300

Query: 3047 DTVEADEQFGELGAHMRGG 3103
            DTVEAD+QFGELGAHMRGG
Sbjct: 301  DTVEADDQFGELGAHMRGG 319