BLASTX nr result

ID: Rehmannia28_contig00003691 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00003691
         (339 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011099595.1| PREDICTED: protein gar2 isoform X2 [Sesamum ...    58   1e-07
ref|XP_011099594.1| PREDICTED: protein gar2 isoform X1 [Sesamum ...    58   1e-07
ref|XP_008461639.1| PREDICTED: protein gar2 [Cucumis melo] gi|65...    55   9e-07
ref|XP_006346816.1| PREDICTED: 29 kDa ribonucleoprotein A, chlor...    55   2e-06
ref|XP_009788352.1| PREDICTED: protein gar2 [Nicotiana sylvestris]     55   2e-06
ref|XP_009612969.1| PREDICTED: protein gar2 [Nicotiana tomentosi...    55   2e-06
emb|CDP00042.1| unnamed protein product [Coffea canephora]             55   2e-06
ref|XP_011654942.1| PREDICTED: protein gar2 isoform X2 [Cucumis ...    55   2e-06
ref|XP_011654941.1| PREDICTED: protein gar2 isoform X1 [Cucumis ...    55   2e-06
gb|KGN50528.1| hypothetical protein Csa_5G180870 [Cucumis sativus]     55   2e-06
ref|NP_001305061.1| RNA binding protein [Solanum lycopersicum]         53   8e-06
ref|XP_015077597.1| PREDICTED: 29 kDa ribonucleoprotein A, chlor...    53   8e-06

>ref|XP_011099595.1| PREDICTED: protein gar2 isoform X2 [Sesamum indicum]
          Length = 452

 Score = 58.2 bits (139), Expect = 1e-07
 Identities = 27/38 (71%), Positives = 31/38 (81%)
 Frame = +1

Query: 85  AVSAKIRGRTCYECGKRGHLSSSCPNRQAEGLAIPGAT 198
           AVS+KIR RTCYECG++GHLSSSCP +QA  LA   AT
Sbjct: 415 AVSSKIRRRTCYECGEKGHLSSSCPKKQAADLANTVAT 452


>ref|XP_011099594.1| PREDICTED: protein gar2 isoform X1 [Sesamum indicum]
          Length = 453

 Score = 58.2 bits (139), Expect = 1e-07
 Identities = 27/38 (71%), Positives = 31/38 (81%)
 Frame = +1

Query: 85  AVSAKIRGRTCYECGKRGHLSSSCPNRQAEGLAIPGAT 198
           AVS+KIR RTCYECG++GHLSSSCP +QA  LA   AT
Sbjct: 416 AVSSKIRRRTCYECGEKGHLSSSCPKKQAADLANTVAT 453


>ref|XP_008461639.1| PREDICTED: protein gar2 [Cucumis melo]
           gi|659123392|ref|XP_008461640.1| PREDICTED: protein gar2
           [Cucumis melo]
          Length = 430

 Score = 55.5 bits (132), Expect = 9e-07
 Identities = 22/29 (75%), Positives = 27/29 (93%)
 Frame = +1

Query: 82  NAVSAKIRGRTCYECGKRGHLSSSCPNRQ 168
           N+VS KIR RTCYECG++GHLSS+CPN+Q
Sbjct: 395 NSVSGKIRRRTCYECGEKGHLSSNCPNKQ 423


>ref|XP_006346816.1| PREDICTED: 29 kDa ribonucleoprotein A, chloroplastic [Solanum
           tuberosum]
          Length = 355

 Score = 54.7 bits (130), Expect = 2e-06
 Identities = 23/29 (79%), Positives = 26/29 (89%)
 Frame = +1

Query: 82  NAVSAKIRGRTCYECGKRGHLSSSCPNRQ 168
           + VSAKIR RTCYECG+RGHLSSSCP +Q
Sbjct: 317 STVSAKIRRRTCYECGERGHLSSSCPKKQ 345


>ref|XP_009788352.1| PREDICTED: protein gar2 [Nicotiana sylvestris]
          Length = 392

 Score = 54.7 bits (130), Expect = 2e-06
 Identities = 23/29 (79%), Positives = 26/29 (89%)
 Frame = +1

Query: 82  NAVSAKIRGRTCYECGKRGHLSSSCPNRQ 168
           + VSAKIR RTCYECG+RGHLSSSCP +Q
Sbjct: 357 STVSAKIRRRTCYECGERGHLSSSCPKKQ 385


>ref|XP_009612969.1| PREDICTED: protein gar2 [Nicotiana tomentosiformis]
          Length = 398

 Score = 54.7 bits (130), Expect = 2e-06
 Identities = 23/29 (79%), Positives = 26/29 (89%)
 Frame = +1

Query: 82  NAVSAKIRGRTCYECGKRGHLSSSCPNRQ 168
           + VSAKIR RTCYECG+RGHLSSSCP +Q
Sbjct: 363 STVSAKIRRRTCYECGERGHLSSSCPKKQ 391


>emb|CDP00042.1| unnamed protein product [Coffea canephora]
          Length = 412

 Score = 54.7 bits (130), Expect = 2e-06
 Identities = 23/34 (67%), Positives = 27/34 (79%)
 Frame = +1

Query: 67  ISNEPNAVSAKIRGRTCYECGKRGHLSSSCPNRQ 168
           + +   AVS KIR RTCYECG+RGHLSSSCP +Q
Sbjct: 369 VGDGATAVSGKIRRRTCYECGERGHLSSSCPKKQ 402


>ref|XP_011654942.1| PREDICTED: protein gar2 isoform X2 [Cucumis sativus]
          Length = 424

 Score = 54.7 bits (130), Expect = 2e-06
 Identities = 22/29 (75%), Positives = 27/29 (93%)
 Frame = +1

Query: 82  NAVSAKIRGRTCYECGKRGHLSSSCPNRQ 168
           +AVS KIR RTCYECG++GHLSS+CPN+Q
Sbjct: 389 SAVSGKIRRRTCYECGEKGHLSSNCPNKQ 417


>ref|XP_011654941.1| PREDICTED: protein gar2 isoform X1 [Cucumis sativus]
          Length = 432

 Score = 54.7 bits (130), Expect = 2e-06
 Identities = 22/29 (75%), Positives = 27/29 (93%)
 Frame = +1

Query: 82  NAVSAKIRGRTCYECGKRGHLSSSCPNRQ 168
           +AVS KIR RTCYECG++GHLSS+CPN+Q
Sbjct: 397 SAVSGKIRRRTCYECGEKGHLSSNCPNKQ 425


>gb|KGN50528.1| hypothetical protein Csa_5G180870 [Cucumis sativus]
          Length = 482

 Score = 54.7 bits (130), Expect = 2e-06
 Identities = 22/29 (75%), Positives = 27/29 (93%)
 Frame = +1

Query: 82  NAVSAKIRGRTCYECGKRGHLSSSCPNRQ 168
           +AVS KIR RTCYECG++GHLSS+CPN+Q
Sbjct: 447 SAVSGKIRRRTCYECGEKGHLSSNCPNKQ 475


>ref|NP_001305061.1| RNA binding protein [Solanum lycopersicum]
          Length = 338

 Score = 52.8 bits (125), Expect = 8e-06
 Identities = 22/28 (78%), Positives = 25/28 (89%)
 Frame = +1

Query: 82  NAVSAKIRGRTCYECGKRGHLSSSCPNR 165
           + VSAKIR RTCYECG+RGHLSSSCP +
Sbjct: 300 STVSAKIRRRTCYECGERGHLSSSCPKK 327


>ref|XP_015077597.1| PREDICTED: 29 kDa ribonucleoprotein A, chloroplastic [Solanum
           pennellii]
          Length = 339

 Score = 52.8 bits (125), Expect = 8e-06
 Identities = 22/28 (78%), Positives = 25/28 (89%)
 Frame = +1

Query: 82  NAVSAKIRGRTCYECGKRGHLSSSCPNR 165
           + VSAKIR RTCYECG+RGHLSSSCP +
Sbjct: 301 STVSAKIRRRTCYECGERGHLSSSCPKK 328


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