BLASTX nr result
ID: Rehmannia28_contig00002302
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia28_contig00002302
(1357 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011096979.1| PREDICTED: heterogeneous nuclear ribonucleop... 89 2e-16
gb|KVI08727.1| Nucleotide-binding, alpha-beta plait [Cynara card... 82 5e-14
ref|XP_007202459.1| hypothetical protein PRUPE_ppa010105mg [Prun... 79 7e-13
ref|XP_010679957.1| PREDICTED: heterogeneous nuclear ribonucleop... 79 8e-13
ref|XP_007028687.1| RNA-binding family protein isoform 2 [Theobr... 78 9e-13
ref|XP_012828705.1| PREDICTED: heterogeneous nuclear ribonucleop... 78 1e-12
ref|XP_009773234.1| PREDICTED: heterogeneous nuclear ribonucleop... 77 2e-12
ref|XP_009597875.1| PREDICTED: heterogeneous nuclear ribonucleop... 77 2e-12
emb|CBI37648.3| unnamed protein product [Vitis vinifera] 77 2e-12
ref|XP_002521718.1| PREDICTED: heterogeneous nuclear ribonucleop... 77 2e-12
ref|XP_002280225.2| PREDICTED: heterogeneous nuclear ribonucleop... 77 2e-12
ref|XP_015071278.1| PREDICTED: heterogeneous nuclear ribonucleop... 77 2e-12
ref|XP_006343330.1| PREDICTED: heterogeneous nuclear ribonucleop... 77 2e-12
ref|XP_007028686.1| RNA-binding family protein isoform 1 [Theobr... 78 3e-12
emb|CAN70556.1| hypothetical protein VITISV_016468 [Vitis vinifera] 77 3e-12
gb|KNA11256.1| hypothetical protein SOVF_136900 isoform A [Spina... 77 4e-12
gb|KNA11257.1| hypothetical protein SOVF_136900 isoform B [Spina... 76 4e-12
ref|XP_011022167.1| PREDICTED: heterogeneous nuclear ribonucleop... 76 4e-12
ref|XP_002307213.2| hypothetical protein POPTR_0005s10420g [Popu... 76 4e-12
ref|XP_010033581.1| PREDICTED: heterogeneous nuclear ribonucleop... 75 8e-12
>ref|XP_011096979.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H2 isoform X1
[Sesamum indicum]
Length = 263
Score = 88.6 bits (218), Expect = 2e-16
Identities = 46/62 (74%), Positives = 46/62 (74%)
Frame = -3
Query: 188 SLFGSGGVSDGYEIGSKRPRLMESNPYFAVXXXXXXXXXXXXXXXXQPSAFPVVRLRGLP 9
SLFGSGGVSDGYEIGSKRPRLMESNPYFAV QPSAFPVVRLRGLP
Sbjct: 7 SLFGSGGVSDGYEIGSKRPRLMESNPYFAVSSSSSSYQQYGYGRRYQPSAFPVVRLRGLP 66
Query: 8 FN 3
FN
Sbjct: 67 FN 68
>gb|KVI08727.1| Nucleotide-binding, alpha-beta plait [Cynara cardunculus var.
scolymus]
Length = 265
Score = 82.0 bits (201), Expect = 5e-14
Identities = 40/62 (64%), Positives = 45/62 (72%)
Frame = -3
Query: 188 SLFGSGGVSDGYEIGSKRPRLMESNPYFAVXXXXXXXXXXXXXXXXQPSAFPVVRLRGLP 9
+++GSGG+SDGYEIGSKRPR+MESNPYFAV QPS FPVVRLRGLP
Sbjct: 7 AMYGSGGLSDGYEIGSKRPRMMESNPYFAVSSGSGGYHPYDYTGGFQPSTFPVVRLRGLP 66
Query: 8 FN 3
FN
Sbjct: 67 FN 68
>ref|XP_007202459.1| hypothetical protein PRUPE_ppa010105mg [Prunus persica]
gi|645273581|ref|XP_008241946.1| PREDICTED:
heterogeneous nuclear ribonucleoprotein H2 isoform X1
[Prunus mume] gi|462397990|gb|EMJ03658.1| hypothetical
protein PRUPE_ppa010105mg [Prunus persica]
Length = 264
Score = 78.6 bits (192), Expect = 7e-13
Identities = 38/62 (61%), Positives = 43/62 (69%)
Frame = -3
Query: 188 SLFGSGGVSDGYEIGSKRPRLMESNPYFAVXXXXXXXXXXXXXXXXQPSAFPVVRLRGLP 9
++ GSGGVSDGYE+GSKRPR+M+SNPYFAV QP AFPV RLRGLP
Sbjct: 7 AMLGSGGVSDGYEVGSKRPRMMDSNPYFAVSSGTSGFQPYNYGGGYQPPAFPVARLRGLP 66
Query: 8 FN 3
FN
Sbjct: 67 FN 68
>ref|XP_010679957.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H2 isoform X1
[Beta vulgaris subsp. vulgaris]
Length = 275
Score = 78.6 bits (192), Expect = 8e-13
Identities = 39/62 (62%), Positives = 43/62 (69%)
Frame = -3
Query: 188 SLFGSGGVSDGYEIGSKRPRLMESNPYFAVXXXXXXXXXXXXXXXXQPSAFPVVRLRGLP 9
++ GSGGVSDGYE+GSKR R+MESNPYFAV QPS FPVVRLRGLP
Sbjct: 19 AMLGSGGVSDGYEVGSKRQRMMESNPYFAVGSSPAGYQPYNYGSSFQPSGFPVVRLRGLP 78
Query: 8 FN 3
FN
Sbjct: 79 FN 80
>ref|XP_007028687.1| RNA-binding family protein isoform 2 [Theobroma cacao]
gi|508717292|gb|EOY09189.1| RNA-binding family protein
isoform 2 [Theobroma cacao]
Length = 264
Score = 78.2 bits (191), Expect = 9e-13
Identities = 39/62 (62%), Positives = 43/62 (69%)
Frame = -3
Query: 188 SLFGSGGVSDGYEIGSKRPRLMESNPYFAVXXXXXXXXXXXXXXXXQPSAFPVVRLRGLP 9
++ GSGGVSDGYE+GSKR R+MESNPYFAV QP AFPVVRLRGLP
Sbjct: 7 AMLGSGGVSDGYEVGSKRQRMMESNPYFAVSSGMSSYQPYSYGGGFQPPAFPVVRLRGLP 66
Query: 8 FN 3
FN
Sbjct: 67 FN 68
>ref|XP_012828705.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H2 [Erythranthe
guttata] gi|604345124|gb|EYU43735.1| hypothetical
protein MIMGU_mgv1a011375mg [Erythranthe guttata]
Length = 283
Score = 78.2 bits (191), Expect = 1e-12
Identities = 42/67 (62%), Positives = 44/67 (65%), Gaps = 5/67 (7%)
Frame = -3
Query: 188 SLFGSGGVSDGYEIGSKRPRLMESNPYFAV-----XXXXXXXXXXXXXXXXQPSAFPVVR 24
SLFGSGGVSDGYEIGSKRPRLMESNPYFA +PS FP+VR
Sbjct: 7 SLFGSGGVSDGYEIGSKRPRLMESNPYFAANPSSSSSYQQQYNPYSRRYHHEPSTFPLVR 66
Query: 23 LRGLPFN 3
LRGLPFN
Sbjct: 67 LRGLPFN 73
>ref|XP_009773234.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H2 isoform X1
[Nicotiana sylvestris]
Length = 265
Score = 77.4 bits (189), Expect = 2e-12
Identities = 41/63 (65%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Frame = -3
Query: 188 SLFGSGGVSDGYEIGSKRPRLMESNPYFAV-XXXXXXXXXXXXXXXXQPSAFPVVRLRGL 12
++ GSGGVSDGYEIGSKRPR+MESNPYFAV QPS FPVVRLRGL
Sbjct: 7 AMLGSGGVSDGYEIGSKRPRMMESNPYFAVSSGSSGYHQSYGYGSRFQPSGFPVVRLRGL 66
Query: 11 PFN 3
PFN
Sbjct: 67 PFN 69
>ref|XP_009597875.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H2 isoform X1
[Nicotiana tomentosiformis]
Length = 265
Score = 77.4 bits (189), Expect = 2e-12
Identities = 41/63 (65%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Frame = -3
Query: 188 SLFGSGGVSDGYEIGSKRPRLMESNPYFAV-XXXXXXXXXXXXXXXXQPSAFPVVRLRGL 12
++ GSGGVSDGYEIGSKRPR+MESNPYFAV QPS FPVVRLRGL
Sbjct: 7 AMLGSGGVSDGYEIGSKRPRMMESNPYFAVSSGSSGYHQPYGYGSRFQPSGFPVVRLRGL 66
Query: 11 PFN 3
PFN
Sbjct: 67 PFN 69
>emb|CBI37648.3| unnamed protein product [Vitis vinifera]
Length = 258
Score = 77.0 bits (188), Expect = 2e-12
Identities = 39/62 (62%), Positives = 42/62 (67%)
Frame = -3
Query: 188 SLFGSGGVSDGYEIGSKRPRLMESNPYFAVXXXXXXXXXXXXXXXXQPSAFPVVRLRGLP 9
++ GSGGVSDGYEIGSKR R+MESNPYFAV QP FPVVRLRGLP
Sbjct: 7 AMLGSGGVSDGYEIGSKRQRMMESNPYFAVSSSASGFQPYGYGSGFQPPTFPVVRLRGLP 66
Query: 8 FN 3
FN
Sbjct: 67 FN 68
>ref|XP_002521718.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H2 isoform X1
[Ricinus communis] gi|223539109|gb|EEF40705.1|
heterogeneous nuclear ribonucleoprotein, putative
[Ricinus communis]
Length = 264
Score = 77.0 bits (188), Expect = 2e-12
Identities = 38/62 (61%), Positives = 43/62 (69%)
Frame = -3
Query: 188 SLFGSGGVSDGYEIGSKRPRLMESNPYFAVXXXXXXXXXXXXXXXXQPSAFPVVRLRGLP 9
++ GSGGVSDGYE+GSKRPR+MESNPYFAV Q + FPVVRLRGLP
Sbjct: 7 AMLGSGGVSDGYEVGSKRPRMMESNPYFAVSGGSSGFQPYGYGGGFQSAPFPVVRLRGLP 66
Query: 8 FN 3
FN
Sbjct: 67 FN 68
>ref|XP_002280225.2| PREDICTED: heterogeneous nuclear ribonucleoprotein H2 isoform X1
[Vitis vinifera]
Length = 264
Score = 77.0 bits (188), Expect = 2e-12
Identities = 39/62 (62%), Positives = 42/62 (67%)
Frame = -3
Query: 188 SLFGSGGVSDGYEIGSKRPRLMESNPYFAVXXXXXXXXXXXXXXXXQPSAFPVVRLRGLP 9
++ GSGGVSDGYEIGSKR R+MESNPYFAV QP FPVVRLRGLP
Sbjct: 7 AMLGSGGVSDGYEIGSKRQRMMESNPYFAVSSSASGFQPYGYGSGFQPPTFPVVRLRGLP 66
Query: 8 FN 3
FN
Sbjct: 67 FN 68
>ref|XP_015071278.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H2 isoform X1
[Solanum pennellii]
Length = 265
Score = 77.0 bits (188), Expect = 2e-12
Identities = 41/64 (64%), Positives = 44/64 (68%), Gaps = 2/64 (3%)
Frame = -3
Query: 188 SLFGSGGVSDGYEIGSKRPRLMESNPYFAV--XXXXXXXXXXXXXXXXQPSAFPVVRLRG 15
++ GSGGVSDGYEIGSKRPR+MESNPYFAV QPS FPVVRLRG
Sbjct: 7 AMLGSGGVSDGYEIGSKRPRMMESNPYFAVSSGASSYHQPYGYGSGRFQPSGFPVVRLRG 66
Query: 14 LPFN 3
LPFN
Sbjct: 67 LPFN 70
>ref|XP_006343330.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H2 isoform X1
[Solanum tuberosum]
Length = 265
Score = 77.0 bits (188), Expect = 2e-12
Identities = 41/64 (64%), Positives = 44/64 (68%), Gaps = 2/64 (3%)
Frame = -3
Query: 188 SLFGSGGVSDGYEIGSKRPRLMESNPYFAV--XXXXXXXXXXXXXXXXQPSAFPVVRLRG 15
++ GSGGVSDGYEIGSKRPR+MESNPYFAV QPS FPVVRLRG
Sbjct: 7 AMLGSGGVSDGYEIGSKRPRMMESNPYFAVSSGASSYHQPYGYGSSRFQPSGFPVVRLRG 66
Query: 14 LPFN 3
LPFN
Sbjct: 67 LPFN 70
>ref|XP_007028686.1| RNA-binding family protein isoform 1 [Theobroma cacao]
gi|508717291|gb|EOY09188.1| RNA-binding family protein
isoform 1 [Theobroma cacao]
Length = 363
Score = 78.2 bits (191), Expect = 3e-12
Identities = 39/62 (62%), Positives = 43/62 (69%)
Frame = -3
Query: 188 SLFGSGGVSDGYEIGSKRPRLMESNPYFAVXXXXXXXXXXXXXXXXQPSAFPVVRLRGLP 9
++ GSGGVSDGYE+GSKR R+MESNPYFAV QP AFPVVRLRGLP
Sbjct: 7 AMLGSGGVSDGYEVGSKRQRMMESNPYFAVSSGMSSYQPYSYGGGFQPPAFPVVRLRGLP 66
Query: 8 FN 3
FN
Sbjct: 67 FN 68
>emb|CAN70556.1| hypothetical protein VITISV_016468 [Vitis vinifera]
Length = 257
Score = 76.6 bits (187), Expect = 3e-12
Identities = 39/61 (63%), Positives = 41/61 (67%)
Frame = -3
Query: 185 LFGSGGVSDGYEIGSKRPRLMESNPYFAVXXXXXXXXXXXXXXXXQPSAFPVVRLRGLPF 6
+ GSGGVSDGYEIGSKR R+MESNPYFAV QP FPVVRLRGLPF
Sbjct: 1 MLGSGGVSDGYEIGSKRQRMMESNPYFAVSSSASGFQPYGYGSGFQPPTFPVVRLRGLPF 60
Query: 5 N 3
N
Sbjct: 61 N 61
>gb|KNA11256.1| hypothetical protein SOVF_136900 isoform A [Spinacia oleracea]
Length = 275
Score = 76.6 bits (187), Expect = 4e-12
Identities = 38/62 (61%), Positives = 43/62 (69%)
Frame = -3
Query: 188 SLFGSGGVSDGYEIGSKRPRLMESNPYFAVXXXXXXXXXXXXXXXXQPSAFPVVRLRGLP 9
++ GSGGVSDGYE+GSKR R+MESNPYFAV QPS FPVVRLRGLP
Sbjct: 19 AMLGSGGVSDGYEVGSKRQRMMESNPYFAVGSGQAGFQPYNYGSNFQPSGFPVVRLRGLP 78
Query: 8 FN 3
F+
Sbjct: 79 FD 80
>gb|KNA11257.1| hypothetical protein SOVF_136900 isoform B [Spinacia oleracea]
Length = 256
Score = 76.3 bits (186), Expect = 4e-12
Identities = 38/61 (62%), Positives = 42/61 (68%)
Frame = -3
Query: 185 LFGSGGVSDGYEIGSKRPRLMESNPYFAVXXXXXXXXXXXXXXXXQPSAFPVVRLRGLPF 6
+ GSGGVSDGYE+GSKR R+MESNPYFAV QPS FPVVRLRGLPF
Sbjct: 1 MLGSGGVSDGYEVGSKRQRMMESNPYFAVGSGQAGFQPYNYGSNFQPSGFPVVRLRGLPF 60
Query: 5 N 3
+
Sbjct: 61 D 61
>ref|XP_011022167.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H2 isoform X1
[Populus euphratica]
Length = 264
Score = 76.3 bits (186), Expect = 4e-12
Identities = 38/62 (61%), Positives = 42/62 (67%)
Frame = -3
Query: 188 SLFGSGGVSDGYEIGSKRPRLMESNPYFAVXXXXXXXXXXXXXXXXQPSAFPVVRLRGLP 9
++ GSGGVSDGYE+GSKR R+MESNPYFAV QP FPVVRLRGLP
Sbjct: 7 AMLGSGGVSDGYEVGSKRQRMMESNPYFAVSSGASGFQPYGYGGGFQPPPFPVVRLRGLP 66
Query: 8 FN 3
FN
Sbjct: 67 FN 68
>ref|XP_002307213.2| hypothetical protein POPTR_0005s10420g [Populus trichocarpa]
gi|550338558|gb|EEE94209.2| hypothetical protein
POPTR_0005s10420g [Populus trichocarpa]
Length = 264
Score = 76.3 bits (186), Expect = 4e-12
Identities = 38/62 (61%), Positives = 42/62 (67%)
Frame = -3
Query: 188 SLFGSGGVSDGYEIGSKRPRLMESNPYFAVXXXXXXXXXXXXXXXXQPSAFPVVRLRGLP 9
++ GSGGVSDGYE+GSKR R+MESNPYFAV QP FPVVRLRGLP
Sbjct: 7 AMLGSGGVSDGYEVGSKRQRMMESNPYFAVSSGASGFQPYGYGGGFQPPPFPVVRLRGLP 66
Query: 8 FN 3
FN
Sbjct: 67 FN 68
>ref|XP_010033581.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H2 isoform X1
[Eucalyptus grandis] gi|629086917|gb|KCW53274.1|
hypothetical protein EUGRSUZ_J02534 [Eucalyptus grandis]
Length = 269
Score = 75.5 bits (184), Expect = 8e-12
Identities = 37/62 (59%), Positives = 42/62 (67%)
Frame = -3
Query: 188 SLFGSGGVSDGYEIGSKRPRLMESNPYFAVXXXXXXXXXXXXXXXXQPSAFPVVRLRGLP 9
++ G GGVSDGYE+GSKR R+MESNPYFAV QP +FPVVRLRGLP
Sbjct: 10 AMLGGGGVSDGYEVGSKRQRMMESNPYFAVSSGSGGYQPFGYGGGFQPPSFPVVRLRGLP 69
Query: 8 FN 3
FN
Sbjct: 70 FN 71