BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00001559
         (343 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011080121.1| PREDICTED: photosystem II reaction center PS...    86   8e-19
ref|XP_012830693.1| PREDICTED: photosystem II reaction center PS...    85   2e-18
ref|XP_012830686.1| PREDICTED: photosystem II reaction center PS...    80   1e-16
ref|XP_009803380.1| PREDICTED: photosystem II reaction center Ps...    62   8e-10
ref|XP_009616744.1| PREDICTED: photosystem II reaction center Ps...    62   8e-10
ref|XP_006355890.1| PREDICTED: photosystem II reaction center Ps...    59   2e-08
ref|XP_015088385.1| PREDICTED: photosystem II reaction center Ps...    57   1e-07
gb|KVI03863.1| hypothetical protein Ccrd_017848 [Cynara carduncu...    56   3e-07
ref|XP_004247130.1| PREDICTED: photosystem II reaction center Ps...    55   5e-07
ref|XP_010091818.1| Photosystem II reaction center PSB28 protein...    55   6e-07
ref|XP_012085217.1| PREDICTED: photosystem II reaction center PS...    52   1e-06
ref|XP_008235587.1| PREDICTED: photosystem II reaction center PS...    53   3e-06
ref|XP_007201389.1| hypothetical protein PRUPE_ppa012196mg [Prun...    53   3e-06
gb|KDP26458.1| hypothetical protein JCGZ_17616 [Jatropha curcas]       52   9e-06

>ref|XP_011080121.1| PREDICTED: photosystem II reaction center PSB28 protein,
           chloroplastic [Sesamum indicum]
          Length = 183

 Score = 85.9 bits (211), Expect = 8e-19
 Identities = 44/70 (62%), Positives = 49/70 (70%)
 Frame = +1

Query: 133 AALQSLAFSSPISHCSHQPRCVPGLXXXXXXXXXXXXFNGQSLSLPRSSLPKHSQIQNMP 312
           AA+QSL FSSPIS CSHQPR   GL            FNGQSL LPRSS+P+ SQ+QN+ 
Sbjct: 5   AAVQSLVFSSPISRCSHQPRSFSGLSIGAIHSSASSSFNGQSLHLPRSSMPRKSQMQNLS 64

Query: 313 RLSIMNVKPT 342
           RLSIM VKPT
Sbjct: 65  RLSIMMVKPT 74


>ref|XP_012830693.1| PREDICTED: photosystem II reaction center PSB28 protein,
           chloroplastic isoform X2 [Erythranthe guttata]
           gi|604348239|gb|EYU46394.1| hypothetical protein
           MIMGU_mgv1a014663mg [Erythranthe guttata]
          Length = 181

 Score = 84.7 bits (208), Expect = 2e-18
 Identities = 46/71 (64%), Positives = 50/71 (70%), Gaps = 1/71 (1%)
 Frame = +1

Query: 130 MAALQSLAFSSPISHCSHQPRCVPGLXXXXXXXXXXXXFNGQSLSLPRSSLPKHSQI-QN 306
           MA+LQSLAFSSPISHCSHQPR +PGL            FNGQSL LPRSS PK SQ  +N
Sbjct: 1   MASLQSLAFSSPISHCSHQPRSIPGLSIGAFHSSASSSFNGQSLHLPRSSSPKISQTNKN 60

Query: 307 MPRLSIMNVKP 339
             RL+IM VKP
Sbjct: 61  TSRLTIMMVKP 71


>ref|XP_012830686.1| PREDICTED: photosystem II reaction center PSB28 protein,
           chloroplastic isoform X1 [Erythranthe guttata]
           gi|604348238|gb|EYU46393.1| hypothetical protein
           MIMGU_mgv1a014663mg [Erythranthe guttata]
          Length = 182

 Score = 80.1 bits (196), Expect = 1e-16
 Identities = 46/72 (63%), Positives = 50/72 (69%), Gaps = 2/72 (2%)
 Frame = +1

Query: 130 MAALQSLAFSSPISHCSHQPRCVP-GLXXXXXXXXXXXXFNGQSLSLPRSSLPKHSQI-Q 303
           MA+LQSLAFSSPISHCSHQPR +P GL            FNGQSL LPRSS PK SQ  +
Sbjct: 1   MASLQSLAFSSPISHCSHQPRSIPVGLSIGAFHSSASSSFNGQSLHLPRSSSPKISQTNK 60

Query: 304 NMPRLSIMNVKP 339
           N  RL+IM VKP
Sbjct: 61  NTSRLTIMMVKP 72


>ref|XP_009803380.1| PREDICTED: photosystem II reaction center Psb28 protein [Nicotiana
           sylvestris]
          Length = 180

 Score = 62.4 bits (150), Expect = 8e-10
 Identities = 35/70 (50%), Positives = 40/70 (57%)
 Frame = +1

Query: 130 MAALQSLAFSSPISHCSHQPRCVPGLXXXXXXXXXXXXFNGQSLSLPRSSLPKHSQIQNM 309
           MA LQSLAFS  +SH SHQPR + G+            FNGQ L L RS    + Q Q M
Sbjct: 1   MATLQSLAFSPALSHTSHQPRSLLGIASGVVHQSAGSSFNGQRLCLTRSRFTSNIQNQKM 60

Query: 310 PRLSIMNVKP 339
            RLSIM V+P
Sbjct: 61  TRLSIMMVQP 70


>ref|XP_009616744.1| PREDICTED: photosystem II reaction center Psb28 protein
           {ECO:0000255|HAMAP-Rule:MF_01370} [Nicotiana
           tomentosiformis]
          Length = 180

 Score = 62.4 bits (150), Expect = 8e-10
 Identities = 35/70 (50%), Positives = 40/70 (57%)
 Frame = +1

Query: 130 MAALQSLAFSSPISHCSHQPRCVPGLXXXXXXXXXXXXFNGQSLSLPRSSLPKHSQIQNM 309
           MA LQSLAFS  +SH SHQPR + G+            FNGQ L L RS    + Q Q M
Sbjct: 1   MATLQSLAFSPALSHSSHQPRSLLGIASGVVHQSAGSSFNGQRLCLTRSRFASNIQNQKM 60

Query: 310 PRLSIMNVKP 339
            RLSIM V+P
Sbjct: 61  SRLSIMMVQP 70


>ref|XP_006355890.1| PREDICTED: photosystem II reaction center Psb28 protein [Solanum
           tuberosum]
          Length = 180

 Score = 58.5 bits (140), Expect = 2e-08
 Identities = 33/70 (47%), Positives = 39/70 (55%)
 Frame = +1

Query: 130 MAALQSLAFSSPISHCSHQPRCVPGLXXXXXXXXXXXXFNGQSLSLPRSSLPKHSQIQNM 309
           MA LQSLAFS  +SH SHQPR + G+            FNGQ L L RS    + + Q M
Sbjct: 1   MATLQSLAFSPALSHTSHQPRSLLGIASRIVHQSAGSSFNGQRLCLSRSRFSTNIKNQKM 60

Query: 310 PRLSIMNVKP 339
            RL IM V+P
Sbjct: 61  SRLCIMMVQP 70


>ref|XP_015088385.1| PREDICTED: photosystem II reaction center Psb28 protein [Solanum
           pennellii]
          Length = 180

 Score = 56.6 bits (135), Expect = 1e-07
 Identities = 32/70 (45%), Positives = 38/70 (54%)
 Frame = +1

Query: 130 MAALQSLAFSSPISHCSHQPRCVPGLXXXXXXXXXXXXFNGQSLSLPRSSLPKHSQIQNM 309
           MA LQSLAFS  +SH +HQPR + G+            FNGQ L L RS      Q + M
Sbjct: 1   MATLQSLAFSPALSHTTHQPRSLLGIASRIVHQSSGSSFNGQRLCLSRSRFATDIQNKKM 60

Query: 310 PRLSIMNVKP 339
            RL IM V+P
Sbjct: 61  SRLCIMMVQP 70


>gb|KVI03863.1| hypothetical protein Ccrd_017848 [Cynara cardunculus var. scolymus]
          Length = 205

 Score = 55.8 bits (133), Expect = 3e-07
 Identities = 30/72 (41%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
 Frame = +1

Query: 130 MAALQSLAFSSPISHCSHQPRCVPGLXXXXXXXXXXXXFNGQSLSLPRS-SLPKHSQIQN 306
           MA LQ++AFSSP+SHC  +PR +PG+            FNGQ+LS+P S  +P   +   
Sbjct: 25  MATLQTMAFSSPVSHCCQKPRFLPGVTSGVVCHSSRSAFNGQALSVPISRRIPGTFKNSR 84

Query: 307 MPRLSIMNVKPT 342
              L+I  VKP+
Sbjct: 85  TSTLTIQMVKPS 96


>ref|XP_004247130.1| PREDICTED: photosystem II reaction center Psb28 protein [Solanum
           lycopersicum]
          Length = 180

 Score = 55.1 bits (131), Expect = 5e-07
 Identities = 31/70 (44%), Positives = 38/70 (54%)
 Frame = +1

Query: 130 MAALQSLAFSSPISHCSHQPRCVPGLXXXXXXXXXXXXFNGQSLSLPRSSLPKHSQIQNM 309
           MA LQSLAFS  +SH +HQPR + G+            FNGQ L L RS      Q + M
Sbjct: 1   MATLQSLAFSPALSHTTHQPRSLLGIASRIVHQSSGSSFNGQRLCLSRSRFATDIQNKKM 60

Query: 310 PRLSIMNVKP 339
            RL I+ V+P
Sbjct: 61  SRLCIVMVQP 70


>ref|XP_010091818.1| Photosystem II reaction center PSB28 protein [Morus notabilis]
           gi|587856034|gb|EXB46026.1| Photosystem II reaction
           center PSB28 protein [Morus notabilis]
          Length = 180

 Score = 54.7 bits (130), Expect = 6e-07
 Identities = 32/71 (45%), Positives = 35/71 (49%)
 Frame = +1

Query: 130 MAALQSLAFSSPISHCSHQPRCVPGLXXXXXXXXXXXXFNGQSLSLPRSSLPKHSQIQNM 309
           MA LQSLAFSSP+SH  HQPR   G             FNGQ L LPR    +      +
Sbjct: 1   MATLQSLAFSSPLSHHLHQPRSFSGKVSLTIRGSSHSTFNGQCLQLPRRRWSQPRPNAQV 60

Query: 310 PRLSIMNVKPT 342
           P   I  VKPT
Sbjct: 61  PGFVIKMVKPT 71


>ref|XP_012085217.1| PREDICTED: photosystem II reaction center PSB28 protein,
           chloroplastic [Jatropha curcas]
          Length = 216

 Score = 52.0 bits (123), Expect(2) = 1e-06
 Identities = 33/75 (44%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
 Frame = +1

Query: 124 YRMAALQSLAFSSPISHCSHQPRCVPGLXXXXXXXXXXXXFNGQSLSLPRSSLP--KHSQ 297
           + MAALQSLA +SP+SH  HQPR   G             FNGQS  LP S L   +H++
Sbjct: 36  HSMAALQSLALASPVSHYLHQPRSFLGSVSSPVHCGVRSSFNGQSFCLPHSRLASIRHNK 95

Query: 298 IQNMPRLSIMNVKPT 342
                R   M VKPT
Sbjct: 96  AS---RFITMMVKPT 107



 Score = 26.9 bits (58), Expect(2) = 1e-06
 Identities = 12/16 (75%), Positives = 13/16 (81%)
 Frame = +3

Query: 30 MAVVFTHHPNTLPKPH 77
          MAVVFTHH   +PKPH
Sbjct: 1  MAVVFTHH--LVPKPH 14


>ref|XP_008235587.1| PREDICTED: photosystem II reaction center PSB28 protein,
           chloroplastic [Prunus mume]
          Length = 180

 Score = 52.8 bits (125), Expect = 3e-06
 Identities = 31/70 (44%), Positives = 34/70 (48%)
 Frame = +1

Query: 130 MAALQSLAFSSPISHCSHQPRCVPGLXXXXXXXXXXXXFNGQSLSLPRSSLPKHSQIQNM 309
           MA LQSLAFSSP+SHC  QPR   GL            FNGQSL + R       +    
Sbjct: 1   MATLQSLAFSSPVSHCLQQPRLHSGLLSWAVHRSAKSTFNGQSLHVSRPQWAPIRRCTQA 60

Query: 310 PRLSIMNVKP 339
            R   M VKP
Sbjct: 61  SRSITMMVKP 70


>ref|XP_007201389.1| hypothetical protein PRUPE_ppa012196mg [Prunus persica]
           gi|462396789|gb|EMJ02588.1| hypothetical protein
           PRUPE_ppa012196mg [Prunus persica]
          Length = 180

 Score = 52.8 bits (125), Expect = 3e-06
 Identities = 31/70 (44%), Positives = 34/70 (48%)
 Frame = +1

Query: 130 MAALQSLAFSSPISHCSHQPRCVPGLXXXXXXXXXXXXFNGQSLSLPRSSLPKHSQIQNM 309
           MA LQSLAFSSP+SHC  QPR   GL            FNGQSL + R       +    
Sbjct: 1   MATLQSLAFSSPVSHCLQQPRLHSGLLSWTVHRSAKSTFNGQSLHVSRPQWAPIRRCTQA 60

Query: 310 PRLSIMNVKP 339
            R   M VKP
Sbjct: 61  SRSITMMVKP 70


>gb|KDP26458.1| hypothetical protein JCGZ_17616 [Jatropha curcas]
          Length = 179

 Score = 51.6 bits (122), Expect = 9e-06
 Identities = 33/73 (45%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
 Frame = +1

Query: 130 MAALQSLAFSSPISHCSHQPRCVPGLXXXXXXXXXXXXFNGQSLSLPRSSLP--KHSQIQ 303
           MAALQSLA +SP+SH  HQPR   G             FNGQS  LP S L   +H++  
Sbjct: 1   MAALQSLALASPVSHYLHQPRSFLGSVSSPVHCGVRSSFNGQSFCLPHSRLASIRHNKAS 60

Query: 304 NMPRLSIMNVKPT 342
              R   M VKPT
Sbjct: 61  ---RFITMMVKPT 70