BLASTX nr result
ID: Rehmannia28_contig00000928
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia28_contig00000928
(1369 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AEQ94200.1| photosystem I assembly protein Ycf3, partial [Fra... 164 1e-46
gb|EYU35343.1| hypothetical protein MIMGU_mgv11b014479mg [Erythr... 164 1e-46
ref|XP_006431325.1| hypothetical protein CICLE_v10030468mg [Citr... 164 1e-46
ref|YP_398330.1| photosystem I assembly protein Ycf3 [Lactuca sa... 164 1e-46
gb|AKJ77620.1| photosystem I assembly protein Ycf3 (chloroplast)... 163 3e-46
gb|ACG30634.1| hypothetical protein [Zea mays] 162 9e-46
ref|YP_004940511.1| ycf3 gene product (chloroplast) [Dorcoceras ... 164 2e-45
gb|AKJ77711.1| photosystem I assembly protein Ycf3 (chloroplast)... 164 2e-45
ref|YP_001381737.1| photosystem I assembly protein ycf3 [Medicag... 164 2e-45
gb|AEQ94198.1| photosystem I assembly protein Ycf3, partial [Cun... 161 2e-45
ref|YP_009139469.1| hypothetical chloroplast RF34 (chloroplast) ... 162 6e-45
gb|AHM88684.1| hypothetical chloroplast RF34 (chloroplast) [Lage... 161 7e-45
gb|AGY48946.1| photosystem I assembly protein Ycf3 (chloroplast)... 160 7e-45
ref|XP_006404497.1| hypothetical protein EUTSA_v10011045mg [Eutr... 161 8e-45
ref|XP_003606041.2| photosystem I assembly protein Ycf3 [Medicag... 161 8e-45
dbj|BAF49855.1| hypothetical protein [Aethionema grandiflorum] 161 9e-45
ref|YP_001123374.1| hypothetical protein CabupaCp022 [Capsella b... 161 9e-45
gb|ALG63290.1| photosystem I assembly protein Ycf3 (chloroplast)... 161 9e-45
ref|YP_001123116.1| hypothetical protein OlpuCp022 [Olimarabidop... 161 9e-45
gb|AIP85231.1| Ycf3 (chloroplast) [Camellia sinensis] 161 9e-45
>gb|AEQ94200.1| photosystem I assembly protein Ycf3, partial [Fraxinus chinensis]
Length = 80
Score = 164 bits (416), Expect = 1e-46
Identities = 78/78 (100%), Positives = 78/78 (100%)
Frame = -3
Query: 1367 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 1188
MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN
Sbjct: 1 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 60
Query: 1187 PFLPQAFNNMAVICHYVR 1134
PFLPQAFNNMAVICHYVR
Sbjct: 61 PFLPQAFNNMAVICHYVR 78
>gb|EYU35343.1| hypothetical protein MIMGU_mgv11b014479mg [Erythranthe guttata]
Length = 82
Score = 164 bits (416), Expect = 1e-46
Identities = 78/78 (100%), Positives = 78/78 (100%)
Frame = -3
Query: 1367 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 1188
MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN
Sbjct: 1 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 60
Query: 1187 PFLPQAFNNMAVICHYVR 1134
PFLPQAFNNMAVICHYVR
Sbjct: 61 PFLPQAFNNMAVICHYVR 78
>ref|XP_006431325.1| hypothetical protein CICLE_v10030468mg [Citrus clementina]
gi|567885976|ref|XP_006435531.1| hypothetical protein
CICLE_v10010876mg [Citrus clementina]
gi|567906098|ref|XP_006445528.1| hypothetical protein
CICLE_v10004110mg [Citrus clementina]
gi|557533397|gb|ESR44565.1| hypothetical protein
CICLE_v10030468mg [Citrus clementina]
gi|557537685|gb|ESR48771.1| hypothetical protein
CICLE_v10010876mg [Citrus clementina]
gi|557547808|gb|ESR58768.1| hypothetical protein
CICLE_v10004110mg [Citrus clementina]
Length = 82
Score = 164 bits (416), Expect = 1e-46
Identities = 78/78 (100%), Positives = 78/78 (100%)
Frame = -3
Query: 1367 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 1188
MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN
Sbjct: 1 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 60
Query: 1187 PFLPQAFNNMAVICHYVR 1134
PFLPQAFNNMAVICHYVR
Sbjct: 61 PFLPQAFNNMAVICHYVR 78
>ref|YP_398330.1| photosystem I assembly protein Ycf3 [Lactuca sativa]
gi|297840977|ref|XP_002888370.1| photosystem I assembly
protein Ycf3 [Arabidopsis lyrata subsp. lyrata]
gi|78675169|dbj|BAE47595.1| photosystem I assembly
protein ycf3 [Lactuca sativa] gi|255631288|gb|ACU16011.1|
unknown [Glycine max] gi|297334211|gb|EFH64629.1|
photosystem I assembly protein Ycf3 [Arabidopsis lyrata
subsp. lyrata] gi|734419124|gb|KHN39943.1| Photosystem I
assembly protein ycf3 [Glycine soja]
gi|748993474|gb|AJE73883.1| photosystem I assembly
protein Ycf3 (plastid) [Vernonia baldwinii]
gi|827346256|gb|AKJ77455.1| photosystem I assembly
protein Ycf3 (chloroplast) [Carthamus tinctorius]
gi|225200|prf||1211235AE ORF 82
Length = 82
Score = 164 bits (416), Expect = 1e-46
Identities = 78/78 (100%), Positives = 78/78 (100%)
Frame = -3
Query: 1367 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 1188
MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN
Sbjct: 1 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 60
Query: 1187 PFLPQAFNNMAVICHYVR 1134
PFLPQAFNNMAVICHYVR
Sbjct: 61 PFLPQAFNNMAVICHYVR 78
>gb|AKJ77620.1| photosystem I assembly protein Ycf3 (chloroplast) [Fagopyrum cymosum]
Length = 82
Score = 163 bits (413), Expect = 3e-46
Identities = 77/78 (98%), Positives = 78/78 (100%)
Frame = -3
Query: 1367 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 1188
MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNG+HTKALEYYFRALERN
Sbjct: 1 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGDHTKALEYYFRALERN 60
Query: 1187 PFLPQAFNNMAVICHYVR 1134
PFLPQAFNNMAVICHYVR
Sbjct: 61 PFLPQAFNNMAVICHYVR 78
>gb|ACG30634.1| hypothetical protein [Zea mays]
Length = 82
Score = 162 bits (410), Expect = 9e-46
Identities = 77/78 (98%), Positives = 77/78 (98%)
Frame = -3
Query: 1367 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 1188
M AQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN
Sbjct: 1 MLAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 60
Query: 1187 PFLPQAFNNMAVICHYVR 1134
PFLPQAFNNMAVICHYVR
Sbjct: 61 PFLPQAFNNMAVICHYVR 78
>ref|YP_004940511.1| ycf3 gene product (chloroplast) [Dorcoceras hygrometricum]
gi|340549408|gb|AEK53230.1| hypothetical chloroplast RF34
(chloroplast) [Dorcoceras hygrometricum]
Length = 171
Score = 164 bits (416), Expect = 2e-45
Identities = 78/78 (100%), Positives = 78/78 (100%)
Frame = -3
Query: 1367 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 1188
MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN
Sbjct: 45 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 104
Query: 1187 PFLPQAFNNMAVICHYVR 1134
PFLPQAFNNMAVICHYVR
Sbjct: 105 PFLPQAFNNMAVICHYVR 122
Score = 105 bits (263), Expect = 2e-23
Identities = 49/50 (98%), Positives = 49/50 (98%)
Frame = -1
Query: 427 RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITRRFE 278
RGEQAIRQGDSEIAEAWF QAAEYWKQAIALTPGNYIEAHNWLKITRRFE
Sbjct: 122 RGEQAIRQGDSEIAEAWFHQAAEYWKQAIALTPGNYIEAHNWLKITRRFE 171
>gb|AKJ77711.1| photosystem I assembly protein Ycf3 (chloroplast) [Perilla
frutescens]
Length = 172
Score = 164 bits (416), Expect = 2e-45
Identities = 78/78 (100%), Positives = 78/78 (100%)
Frame = -3
Query: 1367 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 1188
MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN
Sbjct: 46 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 105
Query: 1187 PFLPQAFNNMAVICHYVR 1134
PFLPQAFNNMAVICHYVR
Sbjct: 106 PFLPQAFNNMAVICHYVR 123
Score = 103 bits (258), Expect = 1e-22
Identities = 48/50 (96%), Positives = 48/50 (96%)
Frame = -1
Query: 427 RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITRRFE 278
RGEQAI QGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKIT RFE
Sbjct: 123 RGEQAIHQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITGRFE 172
>ref|YP_001381737.1| photosystem I assembly protein ycf3 [Medicago truncatula]
Length = 163
Score = 164 bits (415), Expect = 2e-45
Identities = 77/78 (98%), Positives = 78/78 (100%)
Frame = -3
Query: 1367 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 1188
MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN
Sbjct: 43 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 102
Query: 1187 PFLPQAFNNMAVICHYVR 1134
PFLPQAFNNMAVICHY+R
Sbjct: 103 PFLPQAFNNMAVICHYIR 120
Score = 92.0 bits (227), Expect = 2e-18
Identities = 42/45 (93%), Positives = 43/45 (95%)
Frame = -1
Query: 412 IRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITRRFE 278
IRQGDSEIAE+WFDQAAEYWKQAIALTPGNYIEA NWLKIT RFE
Sbjct: 119 IRQGDSEIAESWFDQAAEYWKQAIALTPGNYIEAQNWLKITGRFE 163
>gb|AEQ94198.1| photosystem I assembly protein Ycf3, partial [Cunninghamia
lanceolata] gi|484400214|gb|AGK45609.1| hypothetical
chloroplast RF34, partial (chloroplast) [Elodea
canadensis] gi|484400236|gb|AGK45620.1| hypothetical
chloroplast RF34, partial (chloroplast) [Elodea
canadensis] gi|484400244|gb|AGK45624.1| hypothetical
chloroplast RF34, partial (chloroplast) [Elodea
nuttallii]
Length = 76
Score = 161 bits (407), Expect = 2e-45
Identities = 76/76 (100%), Positives = 76/76 (100%)
Frame = -3
Query: 1367 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 1188
MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN
Sbjct: 1 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 60
Query: 1187 PFLPQAFNNMAVICHY 1140
PFLPQAFNNMAVICHY
Sbjct: 61 PFLPQAFNNMAVICHY 76
>ref|YP_009139469.1| hypothetical chloroplast RF34 (chloroplast) [Dunalia solanacea]
gi|817597853|gb|AKF78413.1| hypothetical chloroplast RF34
(chloroplast) [Dunalia solanacea]
Length = 157
Score = 162 bits (411), Expect = 6e-45
Identities = 77/77 (100%), Positives = 77/77 (100%)
Frame = -3
Query: 1367 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 1188
MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN
Sbjct: 44 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 103
Query: 1187 PFLPQAFNNMAVICHYV 1137
PFLPQAFNNMAVICHYV
Sbjct: 104 PFLPQAFNNMAVICHYV 120
Score = 85.1 bits (209), Expect = 4e-16
Identities = 37/38 (97%), Positives = 38/38 (100%)
Frame = -1
Query: 391 IAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITRRFE 278
+AEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITRRFE
Sbjct: 120 VAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITRRFE 157
>gb|AHM88684.1| hypothetical chloroplast RF34 (chloroplast) [Lagenaria siceraria]
gi|595645281|gb|AHM88743.1| hypothetical chloroplast RF34
(chloroplast) [Lagenaria siceraria]
gi|595645340|gb|AHM88801.1| hypothetical chloroplast RF34
(chloroplast) [Lagenaria siceraria]
gi|595645399|gb|AHM88859.1| hypothetical chloroplast RF34
(chloroplast) [Lagenaria siceraria]
gi|595645457|gb|AHM88916.1| hypothetical chloroplast RF34
(chloroplast) [Lagenaria siceraria]
gi|595645516|gb|AHM88974.1| hypothetical chloroplast RF34
(chloroplast) [Lagenaria siceraria]
gi|595645576|gb|AHM89033.1| hypothetical chloroplast RF34
(chloroplast) [Lagenaria siceraria]
gi|595645636|gb|AHM89092.1| hypothetical chloroplast RF34
(chloroplast) [Lagenaria siceraria]
gi|595645696|gb|AHM89151.1| hypothetical chloroplast RF34
(chloroplast) [Lagenaria siceraria]
gi|595645756|gb|AHM89210.1| hypothetical chloroplast RF34
(chloroplast) [Lagenaria siceraria]
gi|595645816|gb|AHM89269.1| hypothetical chloroplast RF34
(chloroplast) [Lagenaria siceraria]
gi|595645877|gb|AHM89329.1| hypothetical chloroplast RF34
(chloroplast) [Lagenaria siceraria]
gi|595645937|gb|AHM89388.1| hypothetical chloroplast RF34
(chloroplast) [Lagenaria siceraria]
gi|595645997|gb|AHM89447.1| hypothetical chloroplast RF34
(chloroplast) [Lagenaria siceraria]
gi|595646057|gb|AHM89506.1| hypothetical chloroplast RF34
(chloroplast) [Lagenaria siceraria]
gi|595646118|gb|AHM89566.1| hypothetical chloroplast RF34
(chloroplast) [Lagenaria siceraria]
gi|595646178|gb|AHM89625.1| hypothetical chloroplast RF34
(chloroplast) [Lagenaria siceraria]
gi|595646238|gb|AHM89684.1| hypothetical chloroplast RF34
(chloroplast) [Lagenaria siceraria]
gi|595646298|gb|AHM89743.1| hypothetical chloroplast RF34
(chloroplast) [Lagenaria siceraria]
gi|595646358|gb|AHM89802.1| hypothetical chloroplast RF34
(chloroplast) [Lagenaria siceraria]
gi|595646418|gb|AHM89861.1| hypothetical chloroplast RF34
(chloroplast) [Lagenaria siceraria]
gi|595646478|gb|AHM89920.1| hypothetical chloroplast RF34
(chloroplast) [Lagenaria siceraria]
gi|595646538|gb|AHM89979.1| hypothetical chloroplast RF34
(chloroplast) [Lagenaria siceraria]
gi|595646598|gb|AHM90038.1| hypothetical chloroplast RF34
(chloroplast) [Lagenaria siceraria]
gi|595646658|gb|AHM90097.1| hypothetical chloroplast RF34
(chloroplast) [Lagenaria siceraria]
gi|595646718|gb|AHM90156.1| hypothetical chloroplast RF34
(chloroplast) [Lagenaria siceraria]
gi|595646778|gb|AHM90215.1| hypothetical chloroplast RF34
(chloroplast) [Lagenaria siceraria]
gi|595646838|gb|AHM90274.1| hypothetical chloroplast RF34
(chloroplast) [Lagenaria siceraria]
gi|595646898|gb|AHM90333.1| hypothetical chloroplast RF34
(chloroplast) [Lagenaria siceraria]
gi|595646958|gb|AHM90392.1| hypothetical chloroplast RF34
(chloroplast) [Lagenaria siceraria]
gi|595647018|gb|AHM90451.1| hypothetical chloroplast RF34
(chloroplast) [Lagenaria siceraria]
gi|595647078|gb|AHM90510.1| hypothetical chloroplast RF34
(chloroplast) [Lagenaria siceraria]
gi|595647138|gb|AHM90569.1| hypothetical chloroplast RF34
(chloroplast) [Lagenaria siceraria]
gi|595647198|gb|AHM90628.1| hypothetical chloroplast RF34
(chloroplast) [Lagenaria siceraria]
gi|595647258|gb|AHM90687.1| hypothetical chloroplast RF34
(chloroplast) [Lagenaria siceraria]
gi|595647318|gb|AHM90746.1| hypothetical chloroplast RF34
(chloroplast) [Lagenaria siceraria]
gi|595647378|gb|AHM90805.1| hypothetical chloroplast RF34
(chloroplast) [Lagenaria siceraria]
gi|595647438|gb|AHM90864.1| hypothetical chloroplast RF34
(chloroplast) [Lagenaria siceraria]
gi|595647498|gb|AHM90923.1| hypothetical chloroplast RF34
(chloroplast) [Lagenaria siceraria]
gi|595647558|gb|AHM90982.1| hypothetical chloroplast RF34
(chloroplast) [Lagenaria siceraria]
gi|595647618|gb|AHM91041.1| hypothetical chloroplast RF34
(chloroplast) [Lagenaria siceraria]
gi|595647677|gb|AHM91099.1| hypothetical chloroplast RF34
(chloroplast) [Lagenaria siceraria]
gi|595647738|gb|AHM91159.1| hypothetical chloroplast RF34
(chloroplast) [Lagenaria siceraria]
gi|595647797|gb|AHM91217.1| hypothetical chloroplast RF34
(chloroplast) [Lagenaria siceraria]
gi|595647855|gb|AHM91274.1| hypothetical chloroplast RF34
(chloroplast) [Lagenaria siceraria]
Length = 125
Score = 161 bits (408), Expect = 7e-45
Identities = 76/78 (97%), Positives = 77/78 (98%)
Frame = -3
Query: 1367 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 1188
MSAQSEGNYAEAL+NYYEAMRLEIDPYDRSYILYNIGLIHT NGEHTKALEYYFRALERN
Sbjct: 44 MSAQSEGNYAEALENYYEAMRLEIDPYDRSYILYNIGLIHTRNGEHTKALEYYFRALERN 103
Query: 1187 PFLPQAFNNMAVICHYVR 1134
PFLPQAFNNMAVICHYVR
Sbjct: 104 PFLPQAFNNMAVICHYVR 121
>gb|AGY48946.1| photosystem I assembly protein Ycf3 (chloroplast) [Oryza rufipogon]
gi|944068869|gb|KQK04353.1| hypothetical protein
BRADI_2g13107 [Brachypodium distachyon]
Length = 82
Score = 160 bits (404), Expect = 7e-45
Identities = 76/78 (97%), Positives = 76/78 (97%)
Frame = -3
Query: 1367 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 1188
M AQSEGNYAEALQNYYEA RLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN
Sbjct: 1 MLAQSEGNYAEALQNYYEATRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 60
Query: 1187 PFLPQAFNNMAVICHYVR 1134
PFLPQAFNNMAVICHYVR
Sbjct: 61 PFLPQAFNNMAVICHYVR 78
>ref|XP_006404497.1| hypothetical protein EUTSA_v10011045mg [Eutrema salsugineum]
gi|557105616|gb|ESQ45950.1| hypothetical protein
EUTSA_v10011045mg [Eutrema salsugineum]
Length = 122
Score = 161 bits (407), Expect = 8e-45
Identities = 76/76 (100%), Positives = 76/76 (100%)
Frame = -3
Query: 1367 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 1188
MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN
Sbjct: 1 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 60
Query: 1187 PFLPQAFNNMAVICHY 1140
PFLPQAFNNMAVICHY
Sbjct: 61 PFLPQAFNNMAVICHY 76
Score = 87.8 bits (216), Expect = 2e-17
Identities = 40/46 (86%), Positives = 42/46 (91%)
Frame = -1
Query: 415 AIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITRRFE 278
AI+QGDSE+AEAWF QAAEYWKQAI LTPGNYIEA NWL ITRRFE
Sbjct: 77 AIQQGDSEMAEAWFAQAAEYWKQAITLTPGNYIEAQNWLTITRRFE 122
>ref|XP_003606041.2| photosystem I assembly protein Ycf3 [Medicago truncatula]
gi|657387657|gb|AES88238.2| photosystem I assembly
protein Ycf3 [Medicago truncatula]
Length = 122
Score = 161 bits (407), Expect = 8e-45
Identities = 76/76 (100%), Positives = 76/76 (100%)
Frame = -3
Query: 1367 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 1188
MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN
Sbjct: 1 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 60
Query: 1187 PFLPQAFNNMAVICHY 1140
PFLPQAFNNMAVICHY
Sbjct: 61 PFLPQAFNNMAVICHY 76
Score = 93.6 bits (231), Expect = 2e-19
Identities = 43/46 (93%), Positives = 44/46 (95%)
Frame = -1
Query: 415 AIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITRRFE 278
AIRQGDSEIAE+WFDQAAEYWKQAIALTPGNYIEA NWLKIT RFE
Sbjct: 77 AIRQGDSEIAESWFDQAAEYWKQAIALTPGNYIEAQNWLKITGRFE 122
>dbj|BAF49855.1| hypothetical protein [Aethionema grandiflorum]
Length = 126
Score = 161 bits (407), Expect = 9e-45
Identities = 76/76 (100%), Positives = 76/76 (100%)
Frame = -3
Query: 1367 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 1188
MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN
Sbjct: 1 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 60
Query: 1187 PFLPQAFNNMAVICHY 1140
PFLPQAFNNMAVICHY
Sbjct: 61 PFLPQAFNNMAVICHY 76
Score = 97.4 bits (241), Expect = 7e-21
Identities = 44/50 (88%), Positives = 47/50 (94%)
Frame = -1
Query: 427 RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITRRFE 278
RGEQAI+QGDSE+AEAWF QAAEYWKQA+ LTPGNYIEA NWLKITRRFE
Sbjct: 77 RGEQAIQQGDSEMAEAWFAQAAEYWKQALTLTPGNYIEAQNWLKITRRFE 126
>ref|YP_001123374.1| hypothetical protein CabupaCp022 [Capsella bursa-pastoris]
gi|134286574|dbj|BAF50198.1| hypothetical protein
[Capsella bursa-pastoris]
Length = 126
Score = 161 bits (407), Expect = 9e-45
Identities = 76/76 (100%), Positives = 76/76 (100%)
Frame = -3
Query: 1367 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 1188
MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN
Sbjct: 1 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 60
Query: 1187 PFLPQAFNNMAVICHY 1140
PFLPQAFNNMAVICHY
Sbjct: 61 PFLPQAFNNMAVICHY 76
Score = 94.4 bits (233), Expect = 9e-20
Identities = 43/50 (86%), Positives = 45/50 (90%)
Frame = -1
Query: 427 RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITRRFE 278
RGEQAI+QGDSE+ EAWF QAAEYWKQAI LTPGNYIEA NWL ITRRFE
Sbjct: 77 RGEQAIQQGDSEMGEAWFAQAAEYWKQAITLTPGNYIEAQNWLTITRRFE 126
>gb|ALG63290.1| photosystem I assembly protein Ycf3 (chloroplast) [Beta vulgaris
subsp. vulgaris]
Length = 126
Score = 161 bits (407), Expect = 9e-45
Identities = 76/76 (100%), Positives = 76/76 (100%)
Frame = -3
Query: 1367 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 1188
MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN
Sbjct: 1 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 60
Query: 1187 PFLPQAFNNMAVICHY 1140
PFLPQAFNNMAVICHY
Sbjct: 61 PFLPQAFNNMAVICHY 76
Score = 102 bits (255), Expect = 8e-23
Identities = 47/50 (94%), Positives = 48/50 (96%)
Frame = -1
Query: 427 RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITRRFE 278
RGEQAI+QGDSEIAEAWFDQAAEYWKQAI LTPGNYIEAHNWLKIT RFE
Sbjct: 77 RGEQAIQQGDSEIAEAWFDQAAEYWKQAITLTPGNYIEAHNWLKITGRFE 126
>ref|YP_001123116.1| hypothetical protein OlpuCp022 [Olimarabidopsis pumila]
gi|953244540|ref|YP_009179731.1| YCF3 (chloroplast)
[Isatis tinctoria] gi|1002160692|ref|YP_009230822.1| ycf3
(chloroplast) [Arabidopsis arenosa]
gi|1002160778|ref|YP_009230907.1| ycf3 (chloroplast)
[Arabidopsis cebennensis]
gi|1002160864|ref|YP_009230992.1| ycf3 (chloroplast)
[Arabidopsis pedemontana]
gi|1002160949|ref|YP_009231076.1| hypothetical protein
(chloroplast) [Camelina sativa]
gi|5881695|dbj|BAA84386.1| ycf3 [Arabidopsis thaliana]
gi|134286313|dbj|BAF49940.1| hypothetical protein
[Olimarabidopsis pumila] gi|134286398|dbj|BAF50024.1|
hypothetical protein [Arabis hirsuta]
gi|134286486|dbj|BAF50111.1| hypothetical protein
[Barbarea verna] gi|134286664|dbj|BAF50287.1|
hypothetical protein [Crucihimalaya wallichii]
gi|134286753|dbj|BAF50375.1| hypothetical protein [Draba
nemorosa] gi|134286841|dbj|BAF50462.1| hypothetical
protein [Lepidium virginicum]
gi|134286930|dbj|BAF50550.1| hypothetical protein
[Lobularia maritima] gi|134287020|dbj|BAF50639.1|
hypothetical protein [Nasturtium officinale]
gi|943496344|gb|ALL45407.1| YCF3 (chloroplast) [Isatis
tinctoria] gi|972220271|emb|CUA65150.1| ycf3
(chloroplast) [Arabidopsis arenosa]
gi|972220358|emb|CUA65235.1| ycf3 (chloroplast)
[Arabidopsis cebennensis] gi|972220444|emb|CUA65320.1|
ycf3 (chloroplast) [Arabidopsis halleri subsp. halleri]
gi|972220530|emb|CUA65405.1| ycf3 (chloroplast)
[Arabidopsis lyrata subsp. lyrata]
gi|972220616|emb|CUA65490.1| ycf3 (chloroplast)
[Arabidopsis pedemontana] gi|972220702|emb|CUA65575.1|
hypothetical protein (chloroplast) [Capsella rubella]
gi|972220787|emb|CUA65659.1| hypothetical protein
(chloroplast) [Camelina sativa]
Length = 126
Score = 161 bits (407), Expect = 9e-45
Identities = 76/76 (100%), Positives = 76/76 (100%)
Frame = -3
Query: 1367 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 1188
MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN
Sbjct: 1 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 60
Query: 1187 PFLPQAFNNMAVICHY 1140
PFLPQAFNNMAVICHY
Sbjct: 61 PFLPQAFNNMAVICHY 76
Score = 95.9 bits (237), Expect = 3e-20
Identities = 44/50 (88%), Positives = 46/50 (92%)
Frame = -1
Query: 427 RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITRRFE 278
RGEQAI+QGDSE+AEAWF QAAEYWKQAI LTPGNYIEA NWL ITRRFE
Sbjct: 77 RGEQAIQQGDSEMAEAWFAQAAEYWKQAITLTPGNYIEAQNWLTITRRFE 126
>gb|AIP85231.1| Ycf3 (chloroplast) [Camellia sinensis]
Length = 126
Score = 161 bits (407), Expect = 9e-45
Identities = 76/76 (100%), Positives = 76/76 (100%)
Frame = -3
Query: 1367 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 1188
MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN
Sbjct: 1 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 60
Query: 1187 PFLPQAFNNMAVICHY 1140
PFLPQAFNNMAVICHY
Sbjct: 61 PFLPQAFNNMAVICHY 76
Score = 108 bits (270), Expect = 6e-25
Identities = 50/50 (100%), Positives = 50/50 (100%)
Frame = -1
Query: 427 RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITRRFE 278
RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITRRFE
Sbjct: 77 RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITRRFE 126