BLASTX nr result

ID: Rehmannia28_contig00000878 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00000878
         (331 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011097441.1| PREDICTED: THO complex subunit 4D isoform X4...    53   6e-06
ref|XP_011097440.1| PREDICTED: THO complex subunit 4D isoform X3...    53   6e-06

>ref|XP_011097441.1| PREDICTED: THO complex subunit 4D isoform X4 [Sesamum indicum]
          Length = 266

 Score = 52.8 bits (125), Expect = 6e-06
 Identities = 29/65 (44%), Positives = 34/65 (52%)
 Frame = +2

Query: 137 MATLDMSLDDMIKSRKSNEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPLGVNARPSS 316
           MA+LDMSLDDMIK+R+SN +                             NPLGVN RPS+
Sbjct: 1   MASLDMSLDDMIKNRRSNNRGGRGDGRPRRGKGPGMSSRGGRPFGAPRRNPLGVNVRPSA 60

Query: 317 YTIAK 331
           YTIAK
Sbjct: 61  YTIAK 65


>ref|XP_011097440.1| PREDICTED: THO complex subunit 4D isoform X3 [Sesamum indicum]
          Length = 275

 Score = 52.8 bits (125), Expect = 6e-06
 Identities = 29/65 (44%), Positives = 34/65 (52%)
 Frame = +2

Query: 137 MATLDMSLDDMIKSRKSNEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPLGVNARPSS 316
           MA+LDMSLDDMIK+R+SN +                             NPLGVN RPS+
Sbjct: 1   MASLDMSLDDMIKNRRSNNRGGRGDGRPRRGKGPGMSSRGGRPFGAPRRNPLGVNVRPSA 60

Query: 317 YTIAK 331
           YTIAK
Sbjct: 61  YTIAK 65


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