BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00000778
         (5734 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KYP38573.1| Retrovirus-related Pol polyprotein from transposo...  1187   0.0  
gb|AAP46257.1| putative polyprotein [Oryza sativa Japonica Group...  1152   0.0  
emb|CAH66391.1| OSIGBa0134J07.9 [Oryza sativa Indica Group]          1088   0.0  
gb|KYP43625.1| Retrovirus-related Pol polyprotein from transposo...  1029   0.0  
ref|XP_008337255.1| PREDICTED: retrovirus-related Pol polyprotei...  1021   0.0  
gb|KYP61490.1| Retrovirus-related Pol polyprotein from transposo...   985   0.0  
gb|KYP44533.1| Retrovirus-related Pol polyprotein from transposo...   972   0.0  
emb|CAN80930.1| hypothetical protein VITISV_005279 [Vitis vinifera]   972   0.0  
emb|CAN79061.1| hypothetical protein VITISV_024577 [Vitis vinifera]   972   0.0  
gb|KYP69041.1| Retrovirus-related Pol polyprotein from transposo...   971   0.0  
emb|CAN71759.1| hypothetical protein VITISV_020777 [Vitis vinifera]   971   0.0  
ref|XP_013688817.1| PREDICTED: uncharacterized protein LOC106392...   971   0.0  
gb|KYP66220.1| Retrovirus-related Pol polyprotein from transposo...   970   0.0  
gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thal...   967   0.0  
ref|XP_007030765.1| Uncharacterized protein TCM_026511 [Theobrom...   964   0.0  
emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]         964   0.0  
gb|KYP34090.1| Retrovirus-related Pol polyprotein from transposo...   962   0.0  
gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabi...   962   0.0  
emb|CAN60238.1| hypothetical protein VITISV_032906 [Vitis vinifera]   961   0.0  
gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabi...   961   0.0  

>gb|KYP38573.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Cajanus cajan]
          Length = 1120

 Score = 1187 bits (3071), Expect = 0.0
 Identities = 607/1044 (58%), Positives = 757/1044 (72%), Gaps = 9/1044 (0%)
 Frame = -3

Query: 5396 EFKENQQKDXXXXXXXXXXXADEYFPRIMGAKTAKEAWDKLQEEFQGNEKVRATRLQTLR 5217
            + ++ +QKD            +    RIM   TAK+AWD L+EEF+GNE+VR+ +L  LR
Sbjct: 1    KLEDCEQKDAQALFVLQQAVGETIARRIMDVDTAKKAWDILEEEFEGNEQVRSVKLHYLR 60

Query: 5216 RKFENLKMLDSETAKDYYSRVNEVVNQLRAYGENFPESKIVSKILITCTEKYDPIIAAIE 5037
            R+FE +KM +SET ++YY R+ E++N+++ YG+   E ++V        EKYD I+A+IE
Sbjct: 61   REFETIKMKESETIEEYYGRIKEIINKMKLYGKEIKEKRVV--------EKYDSIVASIE 112

Query: 5036 ESKDIEKLTATELMGSLEAHEKRLERRYEKDI-DNAFQSKLSMQSQKNKKNGRKYNEGKP 4860
             S D   L+  +L+G L+AH+ RL    + +  +NAFQSKL +QS +NK++G K N GK 
Sbjct: 113  TSSDPSSLSVNKLIGLLKAHKARLNSCVDTNSNENAFQSKLKLQS-RNKEDGGKKNAGKY 171

Query: 4859 TDNNDKFPPCGICKRKSHLEKDCWFKGKPQCQNCKKFGHVEKSCRLKQRHQANFSENTEF 4680
            + N D        +  S  +KD +    P C  C K GH EK C     H+ANF E    
Sbjct: 172  SRNKDS-------RNFSGNKKDKY----PLCGICNKPGHAEKDCW----HRANFVEEHNQ 216

Query: 4679 ENNLFYVCQAASEENKDTWYLDSGCSNHMTKNESIFCQLDK-ISTKIKIGNGDYMEATGK 4503
            E  LFY  Q   +    +WYLDSGCSNHM K+++IF  +D  +  K+++GNG  +E+ GK
Sbjct: 217  EQRLFYANQEFCDNGDGSWYLDSGCSNHMAKDQNIFKDIDNSVKVKVRLGNGTMVESQGK 276

Query: 4502 GTIAIDTKKGKRYINEVLLVPTIDQNLLSVGQMMEKGYSLYFEGDSCTIYDKKDKSLVIT 4323
            GT+ ++TKKG R I +VLLVP + +NLLS+GQMME GYSL+FE D C IYD K   + I 
Sbjct: 277  GTVVVETKKGTRLIKDVLLVPNLKENLLSIGQMMENGYSLHFERDICKIYDSK--RVEIG 334

Query: 4322 KVKM-RENRCFPIQWRYANDAAMTAQVNDTWLWHRRFGHFNLQGLKILNQKNMMRDLPTI 4146
            +VKM + NR FP+ +    + AM  +V+D+WLWHRRFGHFN+  LK+L+QK MMRDLP++
Sbjct: 335  QVKMEKRNRIFPLSFNRGTNIAMNVEVDDSWLWHRRFGHFNIHALKLLHQKGMMRDLPSL 394

Query: 4145 KELDGVCEGCMLGKQHRQPFPSGKAWRAKKPLELVHTDICGPMRTPSNEQNRYFILFIDD 3966
            KE +  CEGC+LGKQHR  F + KAWRAK  LEL+HT++CGPMRTPS+  NRYFILFI D
Sbjct: 395  KENNEACEGCLLGKQHRSSFSTSKAWRAKDLLELIHTNVCGPMRTPSHTNNRYFILFIYD 454

Query: 3965 YTRMTWVYFLREKSQVFDIFKKFKAYVEKQSGHKIKTIRSDRGKEYTSTQFTKFCEDEGV 3786
            ++RMTWVYFL+ KS+VF IFKKFKA VEKQSG +IK +RSDRGKEYTS +F KFCEDEG+
Sbjct: 455  FSRMTWVYFLKTKSEVFGIFKKFKALVEKQSGKQIKVLRSDRGKEYTSCEFDKFCEDEGI 514

Query: 3785 EHQLTVGYAPEQNGVSERKNRTVMETARSMLMEKGLPKSFWAEAVSTAVYLLNRCPTKAV 3606
            E QLTV Y P+QNGV ERKNR VME  RSML EKGLP  FWAEAV T VYLLNR PT A 
Sbjct: 515  ERQLTVAYTPQQNGVLERKNRIVMEMERSMLKEKGLPNIFWAEAVYTVVYLLNRFPTNAF 574

Query: 3605 QDKTPVEAWSRRKPSAKHLRVFGCICYVHIPQQKRGKLDEKTEKCIFLGYSTQSKGYRVY 3426
            ++ TP+E+ S  KP+ KHLRVFG ICY+H+P +KR KL++KT + IFLGYS+QSKGYRVY
Sbjct: 575  RENTPIESCSGNKPATKHLRVFGSICYIHVPDEKRHKLEDKTVRGIFLGYSSQSKGYRVY 634

Query: 3425 SLSTRKLIISRDVMFDEDAAYNWETNQVEKRSINLP---KLTHEQEETSND---PPETPE 3264
            +L T+KL ISRD+  DE+A +NWE  ++EK++I +P     T   E+ + D    PE+P 
Sbjct: 635  NLQTKKLTISRDIEVDENATWNWEEKRIEKKTIYMPINQPTTSSLEDNNQDIVISPESP- 693

Query: 3263 RAXXXXXXXXXXXXXXXTRSLREIYQTCNLTIMEPDSYEAAAKQEVWVKAXXXXXXXXXK 3084
            R                 RSL +IY+TCNL I+EP S+E AA QEVWVKA         K
Sbjct: 694  RIVPQQEESSPESTPRRVRSLVDIYETCNLAILEPGSFEEAANQEVWVKAMEEEIKMIEK 753

Query: 3083 NETWELTDLPQDKEAIGVKWVYKTKLNPDGSVQKYKARLVAKGYAQQYGIDYSETFAPVA 2904
            N TWEL D P  K+ IGVKWVYKTKLNPDG++QK+KARLVAKGY+Q+ G+DY+ETFAPVA
Sbjct: 754  NNTWELVDFPHGKDIIGVKWVYKTKLNPDGTIQKHKARLVAKGYSQKPGVDYNETFAPVA 813

Query: 2903 RLDTIRALIALAAQKQWKIYQLDVKFAFLNGYLEEEIYVEQPQGFVVQGKEDKVLRLKKA 2724
            RLDTIR LIALAA K W IYQLDVK AFLNG LEEEIYVEQP GFV++G E KVLRLKKA
Sbjct: 814  RLDTIRTLIALAAHKGWNIYQLDVKSAFLNGVLEEEIYVEQPPGFVMKGHEGKVLRLKKA 873

Query: 2723 LYGLKQAPRAWYSRIDDYFTELGFRRSQSEPTLYIKTQGTNNTLIVSLYVDDLIFTGNNE 2544
            LYGLKQAPRAWYS+ID YFT+ GFRRS+SEPTLYIKTQG  +TL++SLYVDDLI+TG N 
Sbjct: 874  LYGLKQAPRAWYSKIDQYFTD-GFRRSKSEPTLYIKTQG-QHTLLLSLYVDDLIYTGTNT 931

Query: 2543 NMIMEFKEDMMKTFEMTDLGLMHYFLGIEIHQRKDGIFISQKKYAESLLKRFKMEGCKTV 2364
            NM+MEFKEDMMKTFEMTDLGLM YFLGIE+ QR DGIFISQKKY E+LLK+F M GCK V
Sbjct: 932  NMMMEFKEDMMKTFEMTDLGLMSYFLGIEVSQRNDGIFISQKKYTEALLKKFNMYGCKPV 991

Query: 2363 ATPLDNNKALKKEDGSPKADNSQF 2292
             T L  N+ L+K DG+P+AD S++
Sbjct: 992  RTLLVTNEKLQKVDGAPEADASRY 1015



 Score =  125 bits (314), Expect = 4e-25
 Identities = 55/75 (73%), Positives = 66/75 (88%)
 Frame = -1

Query: 2275 PSQIHYGAAKRVLRYLEGTKNYGIWYEPVTNSKLIGYTDSDWAGSIDDMKSTSGYAFTLG 2096
            P+QIHYG  KR+LRYL+GT+ +GIWY+ +T S++IGYTD+DWA SIDDMKSTSGYAF+LG
Sbjct: 1046 PNQIHYGTGKRILRYLQGTREFGIWYKNMTKSRMIGYTDNDWARSIDDMKSTSGYAFSLG 1105

Query: 2095 SEIFSWASKKQATVA 2051
            S  FSW SKKQATVA
Sbjct: 1106 SGFFSWVSKKQATVA 1120


>gb|AAP46257.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|108711922|gb|ABF99717.1| retrotransposon protein,
            putative, unclassified [Oryza sativa Japonica Group]
          Length = 1335

 Score = 1152 bits (2981), Expect = 0.0
 Identities = 585/1136 (51%), Positives = 759/1136 (66%), Gaps = 57/1136 (5%)
 Frame = -3

Query: 5540 IPVFRGENYDFWSIKMKTYFCAQDLWDIVNNGYTIPNDISTLSAVQKKEFKENQQKDXXX 5361
            +PVF GENYD WSIKM+T   +Q LWDIV NGY   +   TL+A QKK   E++  D   
Sbjct: 6    VPVFAGENYDIWSIKMRTLLLSQGLWDIVENGYQEYSAGETLTAEQKKSLAEDRMSDAKA 65

Query: 5360 XXXXXXXXADEYFPRIMGAKTAKEAWDKLQEEFQGNEKVRATRLQTLRRKFENLKMLDSE 5181
                    A+  FPRI+GAK +KEAWDKL+EEFQG++KV A +LQTLRR+F+NL M +SE
Sbjct: 66   LFLIQQGVAESLFPRIIGAKKSKEAWDKLKEEFQGSQKVLAVKLQTLRRQFQNLLMKESE 125

Query: 5180 TAKDYYSRVNEVVNQLRAYGENFPESKIVSKILITCTEKYDPIIAAIEESKDIEKLTATE 5001
              KDY+SRV E+VNQ+R YGE+  + K+V KILI+  EKY+ I+AA EESKD+ K     
Sbjct: 126  KVKDYFSRVIEIVNQMRLYGEDINDQKVVEKILISLPEKYEYIVAATEESKDLSK----- 180

Query: 5000 LMGSLEAHEKRLERRYEKDIDNAFQSKLSMQSQKNKKNGRKYNEGKPTDNNDKFPP---- 4833
               SLE+HE+R  +R    I+NAFQSKLS + Q ++  G     G P  +   F      
Sbjct: 181  --DSLESHEERKLQREGSSIENAFQSKLSFRPQNSRFRGNFQKNGFPMRDRGYFQKNGFS 238

Query: 4832 --------------------CGICKRKSHLEKDCWFKGKPQCQNCKKFGHVEKSCRLKQR 4713
                                C IC++ SH    CW   K  C  CK+ GH+ K CR ++ 
Sbjct: 239  RQKEDGQERREKGTSSSNLWCDICQKSSHTTDMCW--KKMTCNKCKRKGHIAKYCRTREI 296

Query: 4712 HQANFSENTEFENNLFYVCQAASEENKDTWYLDSGCSNHMTKNESIFCQLDK-ISTKIKI 4536
            ++ANFS+  E    + + C  A EE  D W +DSGC+NHM  + ++F ++D     KI +
Sbjct: 297  NRANFSQEKEKSEEMVFSCHTAQEEKDDVWVIDSGCTNHMAADPNLFREMDSSYHAKIHM 356

Query: 4535 GNGDYMEATGKGTIAIDTKKGKRYINEVLLVPTIDQNLLSVGQMMEKGYSLYFEGDSCTI 4356
            GNG   ++ GKGT+A+ T  G ++I +VLLVP + QNLLS+GQ++E GY++YFE  SC I
Sbjct: 357  GNGSIAQSEGKGTVAVQTADGPKFIKDVLLVPDLKQNLLSIGQLLEHGYAVYFEDFSCKI 416

Query: 4355 YDKKDKSLVITKVKMRENRCFPIQWRYANDAAMTAQVNDTWLWHRRFGHFNLQGLKILNQ 4176
             D+K+  LV  K+ M +NR F ++  +    A+ ++V+ + LWH+R GH N + LK+L  
Sbjct: 417  LDRKNNRLV-AKINMEKNRNFLLRMNHTTQMALRSEVDISDLWHKRMGHLNYRALKLLRT 475

Query: 4175 KNMMRDLPTIKELDGVCEGCMLGKQHRQPFPSGKAWRAKKPLELVHTDICGPMRTPSNEQ 3996
            K M++ LP I      CEGC+ GKQ R  FP   AWRA  PLELVH DI G + T S   
Sbjct: 476  KGMVQGLPFITLKSDPCEGCVFGKQIRASFPHSGAWRASAPLELVHADIVGKVPTISEGG 535

Query: 3995 NRYFILFIDDYTRMTWVYFLREKSQVFDIFKKFKAYVEKQSGHKIKTIRSDRGKEYTSTQ 3816
            N YFI FIDDYTRM WVYFL+EKS   +IFKKFKA VE QS  KIK +RSD+G+EY S +
Sbjct: 536  NWYFITFIDDYTRMIWVYFLKEKSAALEIFKKFKAMVENQSNRKIKVLRSDQGREYISKE 595

Query: 3815 FTKFCEDEGVEHQLTVGYAPEQNGVSERKNRTVMETARSMLMEKGLPKSFWAEAVSTAVY 3636
            F K+CE+ G+  QLT GY+ +QNGV+ERKNRT+ + A SML +KG+PKSFWAEAV+TAVY
Sbjct: 596  FEKYCENAGIRRQLTAGYSAQQNGVAERKNRTINDMANSMLQDKGMPKSFWAEAVNTAVY 655

Query: 3635 LLNRCPTKAVQDKTPVEAWSRRKPSAKHLRVFGCICYVHIPQQKRGKLDEKTEKCIFLGY 3456
            +LNR PTKAV ++TP EAW  +KP   H+RVFGCICY  +P QKR K D K+++CIF+GY
Sbjct: 656  ILNRSPTKAVTNRTPFEAWYGKKPVIGHMRVFGCICYAQVPAQKRVKFDNKSDRCIFVGY 715

Query: 3455 STQSKGYRVYSLSTRKLIISRDVMFDEDAAYNWETNQVEKR--------SINLPKL--TH 3306
            +   KGYR+Y+L  +K+IISRD +FDE A +NW++ +            ++  P +  TH
Sbjct: 716  ADGIKGYRLYNLEKKKIIISRDAIFDESATWNWKSPEASSTPLLPTTTITLGQPHMHGTH 775

Query: 3305 EQEE----------------------TSNDPPETPERAXXXXXXXXXXXXXXXTRSLREI 3192
            E E+                      +S +   TPE A                +   E 
Sbjct: 776  EVEDHTPSPQPSSPMSSSSASSDSSPSSEEQISTPESAPRRVRSMVELLESTSQQRGSEQ 835

Query: 3191 YQTCNLTIMEPDSYEAAAKQEVWVKAXXXXXXXXXKNETWELTDLPQDKEAIGVKWVYKT 3012
            ++ CN +++EP S++ A K + W+KA         KN TWEL D P+D+E IGVKWVYKT
Sbjct: 836  HEFCNYSVVEPQSFQEAEKHDNWIKAMEDEIHMIEKNNTWELVDRPRDREVIGVKWVYKT 895

Query: 3011 KLNPDGSVQKYKARLVAKGYAQQYGIDYSETFAPVARLDTIRALIALAAQKQWKIYQLDV 2832
            KLNPDGSVQKYKARLVAKG+ Q+ GIDY ET+APVARL+TIR +IALAAQK+WKIYQLDV
Sbjct: 896  KLNPDGSVQKYKARLVAKGFKQKPGIDYYETYAPVARLETIRTIIALAAQKRWKIYQLDV 955

Query: 2831 KFAFLNGYLEEEIYVEQPQGFVVQGKEDKVLRLKKALYGLKQAPRAWYSRIDDYFTELGF 2652
            K AFLNGYL+EEIYVEQP+GF VQG E+KV RLKKALYGLKQAPRAWYS+ID YF + GF
Sbjct: 956  KSAFLNGYLDEEIYVEQPEGFSVQGGENKVFRLKKALYGLKQAPRAWYSQIDKYFIQKGF 1015

Query: 2651 RRSQSEPTLYIKTQGTNNTLIVSLYVDDLIFTGNNENMIMEFKEDMMKTFEMTDLGLMHY 2472
             +S SEPTLY+   GT + LIVSLYVDDLI+TGN+E M+ +FK+DMM T+EM+DLGL+HY
Sbjct: 1016 AKSISEPTLYVNKTGT-DILIVSLYVDDLIYTGNSEKMMQDFKKDMMHTYEMSDLGLLHY 1074

Query: 2471 FLGIEIHQRKDGIFISQKKYAESLLKRFKMEGCKTVATPLDNNKALKKEDGSPKAD 2304
            FLG+E+HQ  +GIFISQ+KYAE++LK+FKM+ CK+V TPL  N+  K  DG+ KAD
Sbjct: 1075 FLGMEVHQSDEGIFISQRKYAENILKKFKMDNCKSVTTPLLPNEKQKARDGADKAD 1130



 Score =  234 bits (598), Expect = 1e-58
 Identities = 115/186 (61%), Positives = 144/186 (77%)
 Frame = -1

Query: 2278 NPSQIHYGAAKRVLRYLEGTKNYGIWYEPVTNSKLIGYTDSDWAGSIDDMKSTSGYAFTL 2099
            +PSQ+++ AAKRVLRY++GT +YGIWY+PV  SKLIGYTDSDWAG +DDMKSTSGYAF+L
Sbjct: 1164 SPSQLNFTAAKRVLRYIKGTADYGIWYKPVKESKLIGYTDSDWAGCLDDMKSTSGYAFSL 1223

Query: 2098 GSEIFSWASKKQATVAQSSAEAEYIAAAMTTSQAIWLKRILEDMGEVQEKATKIFCDSKS 1919
            GS                 AEAEY+AA+   SQ +WL+RI+ED+GE Q + T I+CDSKS
Sbjct: 1224 GS-----------------AEAEYVAASKAVSQVVWLRRIMEDLGEKQYQPTTIYCDSKS 1266

Query: 1918 AIAMAKNPVFHNRTKHIKIKYHFIREAEANSEIELEHCKTDEQLADIFTKALPRGKFEIL 1739
            AIA+++NPV H+RTKHI IKYH+IREA    E++LE C+TDEQLADIFTKAL + KF   
Sbjct: 1267 AIAISENPVSHDRTKHIAIKYHYIREAVDRQEVKLEFCRTDEQLADIFTKALSKEKFVRD 1326

Query: 1738 RDMIGV 1721
            R++IGV
Sbjct: 1327 RELIGV 1332


>emb|CAH66391.1| OSIGBa0134J07.9 [Oryza sativa Indica Group]
          Length = 1314

 Score = 1088 bits (2813), Expect = 0.0
 Identities = 559/1136 (49%), Positives = 732/1136 (64%), Gaps = 57/1136 (5%)
 Frame = -3

Query: 5540 IPVFRGENYDFWSIKMKTYFCAQDLWDIVNNGYTIPNDISTLSAVQKKEFKENQQKDXXX 5361
            +PVF GENYD WSIKM+T   +Q LWDIV+NGY   +   TL+A QKK   E++  D   
Sbjct: 6    VPVFAGENYDIWSIKMRTLLLSQGLWDIVDNGYQEYSAGETLTAEQKKSLAEDRMSDAKA 65

Query: 5360 XXXXXXXXADEYFPRIMGAKTAKEAWDKLQEEFQGNEKVRATRLQTLRRKFENLKMLDSE 5181
                    A+  FPRI+GAK +KEAWDKL+EEFQG++KV A +LQTLRR+F+NL M +SE
Sbjct: 66   LFLIQQGVAESLFPRIIGAKKSKEAWDKLKEEFQGSQKVLAVKLQTLRRQFQNLLMKESE 125

Query: 5180 TAKDYYSRVNEVVNQLRAYGENFPESKIVSKILITCTEKYDPIIAAIEESKDIEKLTATE 5001
              KDY+SRV E+VNQ+R YGE+  + K+V KILI+  EKY+ I+AAIEESKD+  LT  +
Sbjct: 126  KVKDYFSRVIEIVNQMRLYGEDINDQKVVEKILISLPEKYEYIVAAIEESKDLSTLTIQQ 185

Query: 5000 LMGSLEAHEKRLERRYEKDIDNAFQSKLSMQSQKNKKNGRKYNEGKPTDNNDKFPP---- 4833
            LM SLE+HE+R  +R    I+NAFQSKLS + Q ++  G     G P  +   F      
Sbjct: 186  LMSSLESHEERKLQREGSSIENAFQSKLSFRPQNSRFRGNFQKNGFPMRDRGYFQKNGFS 245

Query: 4832 --------------------CGICKRKSHLEKDCWFKGKPQCQNCKKFGHVEKSCRLKQR 4713
                                C I ++ SH    CW   K  C  CK+ GH+ K CR ++ 
Sbjct: 246  TQKEDGQERREKSTSSSNLWCDISQKSSHTTDMCW--KKMTCNKCKRKGHIAKYCRTREI 303

Query: 4712 HQANFSENTEFENNLFYVCQAASEENKDTWYLDSGCSNHMTKNESIFCQLDKI-STKIKI 4536
            ++ANFS+  E    + + C  A EE  D W +DSGC+NHM  + ++F ++D +   KI +
Sbjct: 304  NRANFSQEKEKSEEMVFSCHTAQEEKDDVWVIDSGCTNHMAADPNLFREMDSLYHAKIHM 363

Query: 4535 GNGDYMEATGKGTIAIDTKKGKRYINEVLLVPTIDQNLLSVGQMMEKGYSLYFEGDSCTI 4356
            GNG   ++ GKGT+A+ T  G ++I +VLLVP + QNLLS+GQ++E GY++YFE  SC I
Sbjct: 364  GNGSIAQSEGKGTVAVQTADGPKFIKDVLLVPDLKQNLLSIGQLLEHGYAVYFEDFSCKI 423

Query: 4355 YDKKDKSLVITKVKMRENRCFPIQWRYANDAAMTAQVNDTWLWHRRFGHFNLQGLKILNQ 4176
             D+K+  LV  K+ M +NR F ++  +    A+ ++V+ + LWH+R GH N + LK+L  
Sbjct: 424  LDRKNNRLV-AKINMEKNRNFLLRMNHTTQMALRSEVDISDLWHKRMGHLNYRALKLLRT 482

Query: 4175 KNMMRDLPTIKELDGVCEGCMLGKQHRQPFPSGKAWRAKKPLELVHTDICGPMRTPSNEQ 3996
            K M++ LP I      CEGC+ GKQ +  FP   AWRA  P ELVHTDI G + T S   
Sbjct: 483  KGMVQGLPFITLKSDPCEGCVFGKQIQASFPHSGAWRASAPFELVHTDIVGKVPTMSEGG 542

Query: 3995 NRYFILFIDDYTRMTWVYFLREKSQVFDIFKKFKAYVEKQSGHKIKTIRSDRGKEYTSTQ 3816
            N YFI FIDDYTRM WVYFL+EKS   + FKKFK  VE QS  KIK +RSD+G EY S +
Sbjct: 543  NWYFITFIDDYTRMIWVYFLKEKSAALETFKKFKVMVENQSNRKIKVLRSDQGGEYISKE 602

Query: 3815 FTKFCEDEGVEHQLTVGYAPEQNGVSERKNRTVMETARSMLMEKGLPKSFWAEAVSTAVY 3636
            F K+CE+ G+  QLT GY+ +QNGV+ERKNRT+ + A SML +KG+PKSFWAEAV+TAVY
Sbjct: 603  FEKYCENAGIRRQLTTGYSAQQNGVAERKNRTINDMANSMLQDKGMPKSFWAEAVNTAVY 662

Query: 3635 LLNRCPTKAVQDKTPVEAWSRRKPSAKHLRVFGCICYVHIPQQKRGKLDEKTEKCIFLGY 3456
            +LNR PTKAV ++TP EAW  +KP   H+RVF CICY  +P QKR K D K+ +CIF+GY
Sbjct: 663  ILNRSPTKAVPNRTPFEAWYGKKPVIGHMRVFACICYAQVPAQKRVKFDNKSNRCIFVGY 722

Query: 3455 STQSKGYRVYSLSTRKLIISRDVMFDEDAAYNWETNQVEKR--------SINLPKL--TH 3306
            +   KGYR+Y+L  +K+IISRDV FDE A +NW++ +            ++  P +  TH
Sbjct: 723  ADGIKGYRLYNLEKKKIIISRDVFFDESATWNWKSPEASSTPLLPTTTITLGQPHMHGTH 782

Query: 3305 EQEETSNDPP----------------------ETPERAXXXXXXXXXXXXXXXTRSLREI 3192
            E E+ +  P                        TPE A                +   E 
Sbjct: 783  EVEDHTPSPQPSSPMSSSSASSDSSPSSEEQISTPESAPRRVRSMVELLESTSQQRGSEQ 842

Query: 3191 YQTCNLTIMEPDSYEAAAKQEVWVKAXXXXXXXXXKNETWELTDLPQDKEAIGVKWVYKT 3012
            ++ CN +++EP S++ A K + W+KA         KN TWE  D P+D+E IGVKWVYKT
Sbjct: 843  HEFCNYSVVEPQSFQEAEKHDNWIKAMEDEIHMIEKNNTWEFVDRPRDREVIGVKWVYKT 902

Query: 3011 KLNPDGSVQKYKARLVAKGYAQQYGIDYSETFAPVARLDTIRALIALAAQKQWKIYQLDV 2832
            KLNPDGSVQKYKARLVAKG+ Q+ GIDY ET+APVARL+TIR +IALAAQK+WKIYQLDV
Sbjct: 903  KLNPDGSVQKYKARLVAKGFKQKPGIDYYETYAPVARLETIRTIIALAAQKRWKIYQLDV 962

Query: 2831 KFAFLNGYLEEEIYVEQPQGFVVQGKEDKVLRLKKALYGLKQAPRAWYSRIDDYFTELGF 2652
            K AFLNGYL+EEIYVEQP+ F VQG E+K                             GF
Sbjct: 963  KSAFLNGYLDEEIYVEQPEWFSVQGGENKK----------------------------GF 994

Query: 2651 RRSQSEPTLYIKTQGTNNTLIVSLYVDDLIFTGNNENMIMEFKEDMMKTFEMTDLGLMHY 2472
             +S SEPTLY+   GT+  LIVSLYVDDLI+TGN++ M+ +FK+DMM T+EM+DLGL+HY
Sbjct: 995  AKSISEPTLYVNKTGTD-ILIVSLYVDDLIYTGNSDKMMQDFKKDMMHTYEMSDLGLLHY 1053

Query: 2471 FLGIEIHQRKDGIFISQKKYAESLLKRFKMEGCKTVATPLDNNKALKKEDGSPKAD 2304
            FLG+E+HQ  +GIFISQ+KYAE++LK+FKM+ CK+V TPL  N+  K  DG+ KAD
Sbjct: 1054 FLGMEVHQSDEGIFISQRKYAENILKKFKMDNCKSVTTPLLPNEKQKARDGADKAD 1109



 Score =  233 bits (593), Expect = 4e-58
 Identities = 114/186 (61%), Positives = 143/186 (76%)
 Frame = -1

Query: 2278 NPSQIHYGAAKRVLRYLEGTKNYGIWYEPVTNSKLIGYTDSDWAGSIDDMKSTSGYAFTL 2099
            +PSQ+++ AAKRVLRY++GT +YGIWY+PV  SKLIGYTDSDWAG +DDMKSTSGYAF+L
Sbjct: 1143 SPSQLNFTAAKRVLRYIKGTADYGIWYKPVKESKLIGYTDSDWAGCLDDMKSTSGYAFSL 1202

Query: 2098 GSEIFSWASKKQATVAQSSAEAEYIAAAMTTSQAIWLKRILEDMGEVQEKATKIFCDSKS 1919
            GS                 AEAEY+AA+   SQ +WL+RI+ED GE Q + T I+CDSKS
Sbjct: 1203 GS-----------------AEAEYVAASKAVSQVVWLRRIMEDQGEKQYQPTTIYCDSKS 1245

Query: 1918 AIAMAKNPVFHNRTKHIKIKYHFIREAEANSEIELEHCKTDEQLADIFTKALPRGKFEIL 1739
            AIA+++NPV H+RTKHI IKYH+IREA    E++LE C+TDEQLADIFTKAL + KF   
Sbjct: 1246 AIAISENPVSHDRTKHIAIKYHYIREAVDRQEVKLEFCRTDEQLADIFTKALSKEKFVRD 1305

Query: 1738 RDMIGV 1721
            +++IGV
Sbjct: 1306 KELIGV 1311


>gb|KYP43625.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1262

 Score = 1029 bits (2660), Expect = 0.0
 Identities = 523/1083 (48%), Positives = 710/1083 (65%), Gaps = 15/1083 (1%)
 Frame = -3

Query: 5495 MKTYFCAQDLWDIVNNGYTIPNDISTLSAVQKKEFKENQQKDXXXXXXXXXXXADEYFPR 5316
            M+    A DLW++V  G   P      +  Q K   E   K             D+ F R
Sbjct: 1    MRAQLRAYDLWEVVETGVEPPPLPENSTVAQMKFHSEQVAKRAKTLTILHSAVDDDIFMR 60

Query: 5315 IMGAKTAKEAWDKLQEEFQGNEKVRATRLQTLRRKFENLKMLDSETAKDYYSRVNEVVNQ 5136
            I    TAKE W+KLQEEF GNE+ +  ++  L+R+FE LKM + E  KD+ +++ +VVNQ
Sbjct: 61   ISNLDTAKEVWEKLQEEFFGNERTKQMQVLNLKREFEALKMNEVENIKDFMTKLMKVVNQ 120

Query: 5135 LRAYGENFPESKIVSKILITCTEKYDPIIAAIEESKDIEKLTATELMGSLEAHEKRLERR 4956
            +R  GE  P+S+IV K+L+   E+++  I+++EESKD+ K++ TEL+ +L+A E+R   R
Sbjct: 121  IRLLGEKLPDSRIVEKVLVVLPERFESKISSLEESKDLSKISLTELVNALQAQEQRRLLR 180

Query: 4955 YEKDIDNAF--QSKLSMQSQKNKKNGRKYNEGKPTDNNDKFPPCGICKRKSHLEKDCWFK 4782
             E+ I++A   + K    + K K  G  Y  GK +   + FP                  
Sbjct: 181  QEEAIESALHVRHKGKGPAMKGKFVGEHY--GKDSKKRETFP------------------ 220

Query: 4781 GKPQCQNCKKFGHVEKSCRLKQRHQ---------ANFSENTEFENNLFYVCQAASEENKD 4629
                 + C K+GH+E+ CRLKQ+ Q         AN +E    E+ LF        E+++
Sbjct: 221  -----KFCNKYGHIERFCRLKQQQQNQQNQSPQKANVTEIEGDEDLLFMAKTTKCLEDEN 275

Query: 4628 TWYLDSGCSNHMTKNESIFCQLDKISTKIKIGNGDYMEATGKGTIAIDTKKGKRYINEVL 4449
            TW++DSGC+ HMT     F +L     ++KIGNGD +  TGKG + I T  G ++I++VL
Sbjct: 276  TWFIDSGCTQHMTSKPEFFLELKPAGGRVKIGNGDRLAITGKGIVGIHTATGIKHISDVL 335

Query: 4448 LVPTIDQNLLSVGQMMEKGYSLYFEGDSCTIYDKKDKSLVITKVKMRENRCFPIQWRYAN 4269
            LVP +DQNLLSVGQMM+ GY L F+  SC + D     L   +++MR+ R FP+ W   +
Sbjct: 336  LVPELDQNLLSVGQMMQSGYCLLFKEGSCIVTDVDGHELF--EIEMRK-RSFPVNWNLIS 392

Query: 4268 D--AAMTAQVNDTWLWHRRFGHFNLQGLKILNQKNMMRDLPTIKELDGVCEGCMLGKQHR 4095
            +    ++    D+ LWH+RFGH+NL+ ++   ++ +++DLP I+    VCE C LGKQ+R
Sbjct: 393  EHECKISKIELDSKLWHKRFGHYNLKSIQFAQKQELVKDLPNIQICSEVCESCQLGKQYR 452

Query: 4094 QPFPSGKAWRAKKPLELVHTDICGPMRTPSNEQNRYFILFIDDYTRMTWVYFLREKSQVF 3915
             PFP+   WRA + LELVH+D+CGPM+T S   N+YFILFIDD+TRMTWVYFL++KS+VF
Sbjct: 453  LPFPNSVTWRANEKLELVHSDVCGPMKTTSLNGNKYFILFIDDFTRMTWVYFLKQKSEVF 512

Query: 3914 DIFKKFKAYVEKQSGHKIKTIRSDRGKEYTSTQFTKFCEDEGVEHQLTVGYAPEQNGVSE 3735
             +FKKFKA VE QSG  +K +R+D GKEYTST+F  FC+D GVEHQLTV Y+P+QNGV+E
Sbjct: 513  SVFKKFKALVEAQSGFLLKKLRTDNGKEYTSTEFNIFCDDLGVEHQLTVSYSPQQNGVAE 572

Query: 3734 RKNRTVMETARSMLMEKGLPKSFWAEAVSTAVYLLNRCPTKAVQDKTPVEAWSRRKPSAK 3555
            RKNR+V+E AR M+ EK LPKSFWAEA++TAVYL NR PT+A++  TPVEAW   KPS +
Sbjct: 573  RKNRSVLEMARCMIFEKKLPKSFWAEAINTAVYLQNRLPTRAIKGMTPVEAWGGIKPSVR 632

Query: 3554 HLRVFGCICYVHIPQQKRGKLDEKTEKCIFLGYSTQSKGYRVYSLSTRKLIISRDVMFDE 3375
            HL+VFG +CY H+P  KR KLDE+ E+ I +GYS++SKGY+VY + + K+ +SRD+  DE
Sbjct: 633  HLKVFGSLCYTHVPAVKRSKLDERAERGILIGYSSKSKGYKVYGIDSGKVSVSRDIKVDE 692

Query: 3374 DAAYNWETNQVEKRSI--NLPKLTHEQEETSNDPPETPERAXXXXXXXXXXXXXXXTRSL 3201
            DA +NWET Q+E+  +         +QEE  +D                       TR L
Sbjct: 693  DAYWNWETCQMERHLVLPTFESTIEDQEEDIDD-----------------DFAIRGTRHL 735

Query: 3200 REIYQTCNLTIMEPDSYEAAAKQEVWVKAXXXXXXXXXKNETWELTDLPQDKEAIGVKWV 3021
             EIYQ CN+ ++EP ++E A+K + W +A          N+TW+L D P+DK  IGVKWV
Sbjct: 736  SEIYQRCNVVVLEPTNFEEASKVDEWNQAMKEEMTTIEDNKTWQLVDKPKDKNVIGVKWV 795

Query: 3020 YKTKLNPDGSVQKYKARLVAKGYAQQYGIDYSETFAPVARLDTIRALIALAAQKQWKIYQ 2841
            Y+TKLNPD S+ KYKA LV KGY QQ GIDY+ETFAPVAR+DTIR L+ALAAQ +W+I+ 
Sbjct: 796  YRTKLNPDRSINKYKAILVVKGYVQQPGIDYTETFAPVARMDTIRILLALAAQMKWEIWH 855

Query: 2840 LDVKFAFLNGYLEEEIYVEQPQGFVVQGKEDKVLRLKKALYGLKQAPRAWYSRIDDYFTE 2661
            LDVK AFLNG L EEIYV QP+GFVV+G EDKV +L KALYGLKQAPRAWYSRID YF  
Sbjct: 856  LDVKSAFLNGNLVEEIYVAQPEGFVVKGDEDKVYKLHKALYGLKQAPRAWYSRIDSYFCS 915

Query: 2660 LGFRRSQSEPTLYIKTQGTNNTLIVSLYVDDLIFTGNNENMIMEFKEDMMKTFEMTDLGL 2481
             GFRRS+++ TLY+K      +LI+SLYVDDL+ T NN+  + +  E+M   F+M++LG 
Sbjct: 916  QGFRRSENDATLYVKKLLDGGSLIISLYVDDLLVTSNNQQEVQQLMEEMQNQFKMSNLGK 975

Query: 2480 MHYFLGIEIHQRKDGIFISQKKYAESLLKRFKMEGCKTVATPLDNNKALKKEDGSPKADN 2301
            M+YFLG+E+HQ KDGIF++Q+KYA  +LK++KME CK V TPL  N  L KEDG+ K + 
Sbjct: 976  MNYFLGLEVHQTKDGIFMNQEKYAHEVLKKYKMESCKFVPTPLVQNLKLSKEDGAGKVNV 1035

Query: 2300 SQF 2292
            S +
Sbjct: 1036 SLY 1038



 Score =  256 bits (654), Expect = 1e-65
 Identities = 123/194 (63%), Positives = 156/194 (80%)
 Frame = -1

Query: 2278 NPSQIHYGAAKRVLRYLEGTKNYGIWYEPVTNSKLIGYTDSDWAGSIDDMKSTSGYAFTL 2099
            +PS+IH+ A KRVLRYL+GT  +GIWY+P  N  LIGY DSDWAG+IDDMKST+GY F+L
Sbjct: 1068 SPSEIHFAATKRVLRYLKGTTQFGIWYKPRKNGSLIGYVDSDWAGNIDDMKSTTGYVFSL 1127

Query: 2098 GSEIFSWASKKQATVAQSSAEAEYIAAAMTTSQAIWLKRILEDMGEVQEKATKIFCDSKS 1919
            GS +FSW SKKQ  VAQS+AEAEY+A A   +QAIWL++IL D+G  Q +AT+I+CDSKS
Sbjct: 1128 GSGMFSWNSKKQEIVAQSTAEAEYVAGAAAANQAIWLRKILLDLGAEQLEATEIYCDSKS 1187

Query: 1918 AIAMAKNPVFHNRTKHIKIKYHFIREAEANSEIELEHCKTDEQLADIFTKALPRGKFEIL 1739
            AIA+A+NPV H +TKHI++K+H IREA  N EI+L HC +D Q+ADI TKALP+ +FE L
Sbjct: 1188 AIAIAENPVQHGKTKHIQVKFHVIREAVKNHEIKLIHCCSDLQVADILTKALPKARFERL 1247

Query: 1738 RDMIGVTEICTKEE 1697
            R++IGV+    KEE
Sbjct: 1248 RELIGVSIKNFKEE 1261


>ref|XP_008337255.1| PREDICTED: retrovirus-related Pol polyprotein from transposon TNT
            1-94 [Malus domestica]
          Length = 1750

 Score = 1021 bits (2640), Expect = 0.0
 Identities = 535/1172 (45%), Positives = 724/1172 (61%), Gaps = 79/1172 (6%)
 Frame = -3

Query: 5570 MADTFRSSIPIPVFRGENYDFWSIKMKTYFCAQDLWDIVNNGYTIPNDISTLSAVQKKEF 5391
            MA +  + +  P+F GENY+FW IKM T F +  LW++V  G ++ +        +KK+ 
Sbjct: 1    MAGSGGAEVRTPIFSGENYEFWRIKMVTIFKSHGLWNLVEKGISVXDS-------KKKKA 53

Query: 5390 KENQQ----------------KDXXXXXXXXXXXADEYFPRIMGAKTAKEAWDKLQEEFQ 5259
            K ++                 KD           +D+ FPRI  A +AK AWD L  E+ 
Sbjct: 54   KTDEDTDVDADDDEXMAAIFMKDAKALGIIQSAVSDQIFPRIANAXSAKXAWDLLXXEYH 113

Query: 5258 GNEKVRATRLQTLRRKFENLKMLDSETAKDYYSRVNEVVNQLRAYGENFPESKIVSKILI 5079
            G ++VR+ +LQ L R+FE  +M D E+   Y +R+N+++NQ++ +GE     ++V K+LI
Sbjct: 114  GGDQVRSVKLQNLXREFEYTRMXDDESLTGYLTRLNDLINQMKTFGETLSNERLVQKVLI 173

Query: 5078 TCTEKYDPIIAAIEESKDIEKLTATELMGSLEAHEKRLERRYEKDIDNAFQS-------- 4923
            + T+ YDPI   IE +K +E +   E++  L++ E+R +       + AF S        
Sbjct: 174  SLTKIYDPICLVIENTKCLESVELQEVLAILKSQEQRFDLHSSDATEXAFSSLTVNSKGQ 233

Query: 4922 KLSMQSQKNKKNGRKYNE-GKPTDNNDKF------------------------PPCGICK 4818
              S     N K  R +N+ GK  D+  KF                        P C +C 
Sbjct: 234  NRSYAQSSNFKXQRNWNQKGKKWDSKPKFQQKSFTNVAQNNAXSXVMXQEXTKPQCRVCS 293

Query: 4817 RKSHLEKDCWFKGKPQCQNCKKFGHVEKSCRL-KQRHQANFSENTEFENNLFYVCQAASE 4641
             K H   +C +KGKP+C NC KFGH  + C + K   +AN +   E   NLFY   A SE
Sbjct: 294  -KFHFG-ECRYKGKPKCYNCDKFGHWARECTIGKIXQKANSANQVEVTGNLFYANSAISE 351

Query: 4640 ENKD-TWYLDSGCSNHMTKNESIFCQL-DKISTKIKIGNGDYMEATGKGTIAIDTKKGKR 4467
            +N +  WY+DSGCSNHMT N  +   +   +  K+++     +   G G++ IDT KGK+
Sbjct: 352  KNVNGNWYIDSGCSNHMTGNADLLVDIRTNVXGKVQMXTXVLVNVAGMGSLEIDTNKGKK 411

Query: 4466 YINEVLLVPTIDQNLLSVGQMMEKGYSLYFEGDSCTIYDKKDKSLVITKVKMRENRCFPI 4287
            YI EV+ +P + +NLLSVGQM E GY L F G  C+++D      ++ K K +ENRC+ +
Sbjct: 412  YIREVMHLPGLKENLLSVGQMDEHGYYLVFGGGLCSVFDGPSLDNLVIKXKKKENRCYXL 471

Query: 4286 QWRYANDAAMTAQVN-DTWLWHRRFGHFNLQGLKILNQKNMMRDLPTIKELDGVCEGCML 4110
                 N     A ++  T  WHRR GH N +GLK L +KNM+  LP ++E+  VC+GC  
Sbjct: 472  SLLQDNRLVXKASIDHSTRTWHRRLGHLNFRGLKQLXEKNMVHGLPYLEEIKDVCQGCQF 531

Query: 4109 GKQHRQPFPSGKAWRAKKPLELVHTDICGPMRTPSNEQNRYFILFIDDYTRMTWVYFLRE 3930
            GKQ R  FP  ++WRA  P EL+H D+CGPM   S   NRYF+L IDD TRM WVYFLR 
Sbjct: 532  GKQXRDWFPKNQSWRANCPXELIHXDLCGPMXNASLAGNRYFMLLIDDXTRMIWVYFLRY 591

Query: 3929 KSQVFDIFKKFKAYVEKQSGHKIKTIRSDRGKEYTSTQFTKFCEDEGVEHQLTVGYAPEQ 3750
            KS  F+ FK+FK+ VE QSG K K++RSDRG E+ S++FTKFCE EG++ QLT+ Y P+Q
Sbjct: 592  KSDAFNYFKRFKSMVELQSGFKXKSLRSDRGGEFLSSEFTKFCETEGIQRQLTMAYTPQQ 651

Query: 3749 NGVSERKNRTVMETARSMLMEKGLPKSFWAEAVSTAVYLLNRCPTKAVQDKTPVEAWSRR 3570
            NGV ERKNRTV+E A++ML ++G+P   WAEAV TAVY+LNRCPT A+ + TP EA+S R
Sbjct: 652  NGVVERKNRTVVEMAKTMLHDRGMPYVLWAEAVHTAVYILNRCPTMALGNMTPFEAYSGR 711

Query: 3569 KPSAKHLRVFGCICYVHIPQQKRGKLDEKTEKCIFLGYSTQSKGYRVYSLSTRKLIISRD 3390
            KP   HL++FG +CYVH+P + R KLD K+ K +F+GY+T  KGYR++   T KLI+SRD
Sbjct: 712  KPGIAHLKIFGSLCYVHVPTETRQKLDAKSIKGVFVGYATCEKGYRIFBPCTNKLILSRD 771

Query: 3389 VMFDEDAAYNWETNQ--------------------------VEKRSINLPKLTHEQEETS 3288
            V+FDE   +NW+ N                           +E  S++     H QE+ S
Sbjct: 772  VVFDESMTWNWKENPQSSAAATYIQDQPENVVGMNPYEMSVIEGSSLSPSSPFHIQEQES 831

Query: 3287 NDPPETPERAXXXXXXXXXXXXXXXTRSLREIYQTCNLTIMEPDSYEAAAKQEVWVKAXX 3108
                 TPE A                R+L +I+  CNL +MEP+ YE AA+ E W++A  
Sbjct: 832  C----TPESAKLSEDYDHTPLKW---RNLDDIFAQCNLCVMEPERYEEAAQDESWLRAMQ 884

Query: 3107 XXXXXXXKNETWELTDLPQDKEAIGVKWVYKTKLNPDGSVQKYKARLVAKGYAQQYGIDY 2928
                   KN TWEL D P  +  IGVKWVYKTKLN DG+V K KARLVAKGYAQ+ G DY
Sbjct: 885  DELTMIEKNGTWELVDRPTMQPVIGVKWVYKTKLNLDGTVLKNKARLVAKGYAQKPGFDY 944

Query: 2927 SETFAPVARLDTIRALIALAAQKQWKIYQLDVKFAFLNGYLEEEIYVEQPQGFVVQGKED 2748
            +ET+APVARLDTIR LIALAAQK W++YQLDVK AFLNG L+EE+YV+QP+GF VQGKED
Sbjct: 945  NETYAPVARLDTIRTLIALAAQKSWRLYQLDVKSAFLNGVLQEEVYVDQPEGFTVQGKED 1004

Query: 2747 KVLRLKKALYGLKQAPRAWYSRIDDYFTELGFRRSQSEPTLYIKTQGTNNTLIVSLYVDD 2568
            KV RL KALYGLKQAPRAWY  ID YF++ GF++S SEPTLYIK++G  + +IVS+YVDD
Sbjct: 1005 KVYRLHKALYGLKQAPRAWYGEIDAYFSQCGFQKSLSEPTLYIKSRGEKDIIIVSIYVDD 1064

Query: 2567 LIFTGNNENMIMEFKEDMMKTFEMTDLGLMHYFLGIEIHQRKDGIFISQKKYAESLLKRF 2388
            +++TG+++ M+ EFKEDMM  +EMTDLGL+H+FLG+ + Q    IFI QKKYA SLL +F
Sbjct: 1065 IVYTGSSKEMLEEFKEDMMMKYEMTDLGLLHHFLGMGVIQTNFSIFIHQKKYASSLLNKF 1124

Query: 2387 KMEGCKTVATPLDNNKALKKEDGSPKADNSQF 2292
             +  CK+V+TPL + + L K+DGS  A+  Q+
Sbjct: 1125 GLNECKSVSTPLISAEKLSKDDGSGPANEEQY 1156



 Score =  227 bits (578), Expect = 5e-56
 Identities = 108/184 (58%), Positives = 140/184 (76%)
 Frame = -1

Query: 2278 NPSQIHYGAAKRVLRYLEGTKNYGIWYEPVTNSKLIGYTDSDWAGSIDDMKSTSGYAFTL 2099
            +P+  HYG AKRVLRY++GT +YG+ Y    N+ LIG+ DSDW GS+DD KSTSGYAF+ 
Sbjct: 1186 SPTNKHYGTAKRVLRYIKGTLDYGLEYVKGKNAMLIGFCDSDWGGSVDDSKSTSGYAFSF 1245

Query: 2098 GSEIFSWASKKQATVAQSSAEAEYIAAAMTTSQAIWLKRILEDMGEVQEKATKIFCDSKS 1919
            GS +FSWAS KQ  VA S+AEAEYI+A+  T QAIWL+ +LED GE+Q +AT + CD+ +
Sbjct: 1246 GSGVFSWASVKQNCVALSTAEAEYISASEATVQAIWLRFVLEDFGEMQTEATPVHCDNTA 1305

Query: 1918 AIAMAKNPVFHNRTKHIKIKYHFIREAEANSEIELEHCKTDEQLADIFTKALPRGKFEIL 1739
            AIA+ KNPVFH +TKHI  +YHFI+ A     I+L +C T+EQ+ADIFTKAL + +F  L
Sbjct: 1306 AIAITKNPVFHQKTKHIDRRYHFIKNALQEGIIDLVYCPTNEQVADIFTKALSKDRFNYL 1365

Query: 1738 RDMI 1727
            RDM+
Sbjct: 1366 RDML 1369


>gb|KYP61490.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1256

 Score =  985 bits (2547), Expect = 0.0
 Identities = 512/1104 (46%), Positives = 704/1104 (63%), Gaps = 11/1104 (0%)
 Frame = -3

Query: 5570 MADTFRSSIPIPVFRGENYDFWSIKMKTYFCAQDLWDIVNNGYTIPNDISTLSAVQKKEF 5391
            MA    S  P PVF GENYD W+ KM+TY  AQ LW++V NG          +  Q +  
Sbjct: 1    MASGSSSLPPPPVFAGENYDLWAAKMRTYLRAQSLWEVVENGSNPAPLPDNPTMAQIRFH 60

Query: 5390 KENQQKDXXXXXXXXXXXADEYFPRIMGAKTAKEAWDKLQEEFQGNEKVRATRLQTLRRK 5211
             +   K+            D+ F +I+   TAKEAWDKL+EEFQG+E+ R  ++  LRR+
Sbjct: 61   NDEVAKEGRALAIIQAAVHDDVFIKILNLDTAKEAWDKLKEEFQGSERTRRMKVLNLRRE 120

Query: 5210 FENLKMLDSETAKDYYSRVNEVVNQLRAYGENFPESKIVSKILITCTEKYDPIIAAIEES 5031
            FE +KM +SET K++  R+++VV Q+R  GE   + ++V K+L+   E+++  I+++EE+
Sbjct: 121  FEAIKMKESETVKEFSDRLSKVVTQIRLLGEELSDQRVVEKVLVCLPERFESKISSLEEN 180

Query: 5030 KDIEKLTATELMGSLEAHEKRLERRYEKDIDNAFQSKLSMQSQKNKKNGRKYNEGKPTDN 4851
            KD  +++  EL+ +L+A E+                                        
Sbjct: 181  KDFSQISLAELVNALQATEQ---------------------------------------- 200

Query: 4850 NDKFPPCGICKRKSHLEKDCWFKGKPQCQNCKKFGHVEKSCRLK---QRHQANFSENTE- 4683
                      +R   +E++   K    C+ C + GHVEK C+ K   Q  QA  +E+ E 
Sbjct: 201  ----------RRSLRMEENVEVK----CRACNQLGHVEKVCKNKVKLQGQQAQVAEHQEQ 246

Query: 4682 FENNLFYVCQAASEENKDTWYLDSGCSNHMTKNESIFCQLD-KISTKIKIGNGDYMEATG 4506
             E  LF     +   NK+ W +DSGC+NHMT + SIF +LD    +K+ IGNG+ ++  G
Sbjct: 247  IEEQLFVASCYSVSNNKEAWLIDSGCTNHMTHDASIFKELDLSYLSKVTIGNGECVDVKG 306

Query: 4505 KGTIAIDTKKGKRYINEVLLVPTIDQNLLSVGQMMEKGYSLYFEGDSCTIYDKKDKSLVI 4326
            KG +A++T  G +YI +VL VP I+ NLLSVGQM+EK Y L+FE   C I D     L+ 
Sbjct: 307  KGVVAVETPSGTKYIYDVLFVPEINLNLLSVGQMLEKNYVLHFEDMKCKIIDPSGCELMT 366

Query: 4325 TKVKMRENRCFPIQWRYANDAAMTAQVNDTWLWHRRFGHFNLQGLKILNQKNMMRDLPTI 4146
              ++MR+ + FPI+W+     A  + VND++LWH+R GHF+   LK ++  +++++LP I
Sbjct: 367  --IRMRD-KSFPIEWKQTAMHAFPSAVNDSFLWHKRLGHFSYSTLKRMSSNDLVKNLPAI 423

Query: 4145 KELDGVCEGCMLGKQHRQPFPSGKAWRAKKPLELVHTDICGPMRTPSNEQNRYFILFIDD 3966
            ++   +C+ C  GKQ + PFP   +WRA + L+LVHTD+CGPM T S   ++YF+LFIDD
Sbjct: 424  QDNANLCDVCQYGKQRKLPFPKEASWRATEKLQLVHTDVCGPMSTTSLNGSKYFLLFIDD 483

Query: 3965 YTRMTWVYFLREKSQVFDIFKKFKAYVEKQSGHKIKTIRSDRGKEYTSTQFTKFCEDEGV 3786
            YTRM+WV+FL++KS VF  F KFK  VE ++G ++K +RSD G EYT+ +F KFCE  G+
Sbjct: 484  YTRMSWVFFLKKKSDVFANFLKFKFMVENETGLQVKRLRSDNGTEYTAGEFKKFCEQVGI 543

Query: 3785 EHQLTVGYAPEQNGVSERKNRTVMETARSMLMEKGLPKSFWAEAVSTAVYLLNRCPTKAV 3606
            +HQLTV Y P+QNGVSERKNRTVME AR +L EKGLPK+FWAEAV+T+VYLLN  PTKA+
Sbjct: 544  QHQLTVPYTPQQNGVSERKNRTVMEMARCLLFEKGLPKTFWAEAVNTSVYLLNLLPTKAL 603

Query: 3605 QDKTPVEAWSRRKPSAKHLRVFGCICYVHIPQQKRGKLDEKTEKCIFLGYSTQSKGYRVY 3426
            +  TP EAW  R PS +HL+VFGC+CY  +P+ KR KLD+K+E  IFLGYS+ SKGYR+Y
Sbjct: 604  KGNTPFEAWHGRTPSVEHLKVFGCVCYALVPEVKRDKLDQKSEVGIFLGYSSYSKGYRIY 663

Query: 3425 SLSTRKLIISRDVMFDEDAAYNWETNQVE---KRSI---NLPKLTHEQEETSNDPPETPE 3264
            + +T+K+++SR+V FDE + +NWE ++ E   KR +   NL +   E EE + D  + P 
Sbjct: 664  NPATKKILVSRNVKFDELSRWNWEKSKAEASNKRQLEVDNLQEQNSESEEQNLDDDDFPV 723

Query: 3263 RAXXXXXXXXXXXXXXXTRSLREIYQTCNLTIMEPDSYEAAAKQEVWVKAXXXXXXXXXK 3084
            R                TR L EIY+ CN+  +EP  Y  AA+ E W  A         K
Sbjct: 724  RG---------------TRDLAEIYERCNVAALEPKEYAEAAELEGWRVAMQEEMNMIEK 768

Query: 3083 NETWELTDLPQDKEAIGVKWVYKTKLNPDGSVQKYKARLVAKGYAQQYGIDYSETFAPVA 2904
            N TW+L D P +++ IG+KWVY+TKLN DGSV K KARLV KGY QQYG+D+ +TFAPVA
Sbjct: 769  NNTWQLVDRPINQKVIGLKWVYRTKLNYDGSVNKLKARLVVKGYHQQYGVDFLDTFAPVA 828

Query: 2903 RLDTIRALIALAAQKQWKIYQLDVKFAFLNGYLEEEIYVEQPQGFVVQGKEDKVLRLKKA 2724
            R DTIR L+ALAA+  WKIY  DVK AFLNG+LEE+IYV+QP+GF V+G E+KV +L KA
Sbjct: 829  RHDTIRMLVALAAKFGWKIYHFDVKSAFLNGFLEEDIYVDQPEGFQVKGSENKVYKLHKA 888

Query: 2723 LYGLKQAPRAWYSRIDDYFTELGFRRSQSEPTLYIKTQGTNNTLIVSLYVDDLIFTGNNE 2544
            LYGLKQAPRAWY+RID+Y  + GF RS++E TLY+K       LI+SLYVDD++  G++ 
Sbjct: 889  LYGLKQAPRAWYTRIDNYLLQKGFERSENEATLYVKRSQNEVKLIISLYVDDMLVIGSDF 948

Query: 2543 NMIMEFKEDMMKTFEMTDLGLMHYFLGIEIHQRKDGIFISQKKYAESLLKRFKMEGCKTV 2364
            + + +FK DM   FEM+DLG M+YFLG+EI+Q   GIFISQ+KY   +LK+F ME CK V
Sbjct: 949  DSLRQFKHDMENEFEMSDLGQMNYFLGMEIYQCDAGIFISQRKYVLEILKKFHMEKCKPV 1008

Query: 2363 ATPLDNNKALKKEDGSPKADNSQF 2292
             TPL  N+ L   D   K D S +
Sbjct: 1009 DTPLVINEKLSLNDAIAKVDASLY 1032



 Score =  245 bits (625), Expect = 4e-62
 Identities = 119/194 (61%), Positives = 151/194 (77%)
 Frame = -1

Query: 2278 NPSQIHYGAAKRVLRYLEGTKNYGIWYEPVTNSKLIGYTDSDWAGSIDDMKSTSGYAFTL 2099
            +PSQ HYGAAKRVLRYL+GT +YG+W+    + +L GY DSDWAGSIDD KSTSGY F+ 
Sbjct: 1062 SPSQAHYGAAKRVLRYLKGTTDYGLWFLQNESGELQGYADSDWAGSIDDSKSTSGYVFSF 1121

Query: 2098 GSEIFSWASKKQATVAQSSAEAEYIAAAMTTSQAIWLKRILEDMGEVQEKATKIFCDSKS 1919
            GS +F+W SKKQ  VAQSSAEAEYI+AA   + AIWL++IL D+ + Q +AT I+ D+KS
Sbjct: 1122 GSGVFTWNSKKQEVVAQSSAEAEYISAAAAANHAIWLRKILCDVKQHQNEATIIWVDNKS 1181

Query: 1918 AIAMAKNPVFHNRTKHIKIKYHFIREAEANSEIELEHCKTDEQLADIFTKALPRGKFEIL 1739
            AIA+AKNPV + RTKHIK+KYH IREAE + E+ L+HC ++ Q+ADI TKAL + KFE+L
Sbjct: 1182 AIAIAKNPVQYGRTKHIKVKYHAIREAEKSKEVSLKHCSSENQIADIMTKALSKSKFEML 1241

Query: 1738 RDMIGVTEICTKEE 1697
            R  +GV +   KEE
Sbjct: 1242 RSKLGVCKKNLKEE 1255


>gb|KYP44533.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1342

 Score =  972 bits (2513), Expect = 0.0
 Identities = 507/1120 (45%), Positives = 713/1120 (63%), Gaps = 41/1120 (3%)
 Frame = -3

Query: 5540 IPVFRGENYDFWSIKMKTYFCAQDLWDIVNNGYTIPNDISTLSAVQKKEFKENQQKDXXX 5361
            +P+    NYD WS++M     A D+W++V  G+T P ++ +LS  QK   ++++++D   
Sbjct: 10   VPMLTKSNYDNWSLRMVALLGAHDVWEVVEKGHTEPENVESLSQAQKDSLRDSRKRDKKA 69

Query: 5360 XXXXXXXXADEYFPRIMGAKTAKEAWDKLQEEFQGNEKVRATRLQTLRRKFENLKMLDSE 5181
                     ++ F +I G KTAKEAW+KL+  ++G ++V+  RLQTLR +FE L M + E
Sbjct: 70   LCLIYQGLDEDTFEKISGVKTAKEAWEKLKISYKGADQVKKVRLQTLRGEFEALHMKEGE 129

Query: 5180 TAKDYYSRVNEVVNQLRAYGENFPESKIVSKILITCTEKYDPIIAAIEESKDIEKLTATE 5001
               DY+SRV  V N L+  GE   + +I+ KIL +   K++ I+   EE+KD+E ++  +
Sbjct: 130  LVSDYFSRVLTVTNNLKRNGEKLDDVRIMEKILRSLDPKFEHIVTITEETKDLEAMSIEQ 189

Query: 5000 LMGSLEAHEKRLERRYEKDIDNAFQSKLSMQSQKNKKN------------GRKYNEG--- 4866
            L+GSL+A+E++ +++ E+ ++  F++ +  + ++N  N            GR Y  G   
Sbjct: 190  LLGSLQAYEEKKKKK-EEIVEQVFKAHVDSRKEENAHNQSRRSYSQEQGRGRAYGHGQGR 248

Query: 4865 KPTDNNDKFPPCGICKRKSHLEKDCWFKGKPQCQNCKKFGHVEKSCRL----KQRHQANF 4698
            +P +NN +       + + +     + K + +C NC KFGH    CR     K   +AN+
Sbjct: 249  RPNNNNQRGESSNRGRGRGN-PNSRYDKSRIKCYNCNKFGHYASECRAPNKNKVEEKANY 307

Query: 4697 SENTEFENNLFYVCQAASEENKDT-WYLDSGCSNHMTKNESIFCQLDK-ISTKIKIGNGD 4524
            +E    E+    +     ++ +D  WYLDSG SNHM    S+F +LD+ +   +  G+  
Sbjct: 308  AEERCQEDGTLLLAYKGQDKGEDNQWYLDSGASNHMCGKRSMFVELDESVKGNVAFGDES 367

Query: 4523 YMEATGKGTIAIDTKKGK-RYINEVLLVPTIDQNLLSVGQMMEKGYSLYFEGDSCTIYDK 4347
             +   GKG + I  K G+ ++I+ V  VP++  N+LS+GQ++EKGY +  + ++ +I D 
Sbjct: 368  KVAVEGKGNVLIRLKNGEHQFISNVYYVPSMKSNILSLGQLLEKGYDIQLKNNNLSIRD- 426

Query: 4346 KDKSLVITKVKMRENRCFPIQWRYANDAAMTAQVND-TWLWHRRFGHFNLQGLKILNQKN 4170
             + S  I KV M  NR F +  +      +     D +WLWH RFGH N +GL++L++K 
Sbjct: 427  -NTSRFIAKVPMTRNRMFVLNIQSDGPQCLKMCYKDQSWLWHLRFGHLNFKGLELLSKKA 485

Query: 4169 MMRDLPTIKELDGVCEGCMLGKQHRQPFPSGKAWRAKKPLELVHTDICGPMRTPSNEQNR 3990
            M+R LP I   + VCEGC+LGKQ R  FP     RA+KPLEL+HTD+CGP++  S  ++ 
Sbjct: 486  MVRGLPCITHPNQVCEGCLLGKQFRLSFPKESDSRAQKPLELIHTDVCGPIKPRSLGKSN 545

Query: 3989 YFILFIDDYTRMTWVYFLREKSQVFDIFKKFKAYVEKQSGHKIKTIRSDRGKEYTSTQFT 3810
            YF+LFIDD++R TWVYFL+EKS+VF+ FKKFKA+VEK+SG  IK +RSDRG E+TS +F 
Sbjct: 546  YFLLFIDDFSRKTWVYFLKEKSEVFENFKKFKAHVEKESGLLIKALRSDRGGEFTSKEFQ 605

Query: 3809 KFCEDEGVEHQLTVGYAPEQNGVSERKNRTVMETARSMLMEKGLPKSFWAEAVSTAVYLL 3630
            K+CED G+  QLTV  +P+QNGV+ERKNRT++E ARSML  K LPK FWAEAV+ AVYL 
Sbjct: 606  KYCEDNGIRRQLTVPRSPQQNGVAERKNRTILEMARSMLKSKKLPKEFWAEAVACAVYLT 665

Query: 3629 NRCPTKAVQDKTPVEAWSRRKPSAKHLRVFGCICYVHIPQQKRGKLDEKTEKCIFLGYST 3450
            NR PT++V  KTP EAWS RKP   HLRVFG I +VH+P +KR KLD+K+EK IF+GY  
Sbjct: 666  NRSPTRSVSGKTPQEAWSGRKPGISHLRVFGSIAHVHVPDEKRSKLDDKSEKYIFIGYDA 725

Query: 3449 QSKGYRVYSLSTRKLIISRDVMFDEDAAYNWETN--------QVEKRSINLPKLTHEQEE 3294
             SKGY++Y+  +RK IISR+V+FDE+  ++W TN         VE+  +   +   + +E
Sbjct: 726  NSKGYKLYNPDSRKTIISRNVVFDEEGEWDWSTNCEDHTFFPCVEEDDV---EQQQQPQE 782

Query: 3293 TSNDPPETPERAXXXXXXXXXXXXXXXTRSLREIYQT----------CNLTIMEPDSYEA 3144
            T   PP +P                   RSL+EIY+           C     EP +++ 
Sbjct: 783  TPTTPPTSPNTT--LQDYESSSERMPRFRSLQEIYEATENLDNVTLFCLFADCEPMNFQE 840

Query: 3143 AAKQEVWVKAXXXXXXXXXKNETWELTDLPQDKEAIGVKWVYKTKLNPDGSVQKYKARLV 2964
            A  ++ W  A         KN+TWEL  LP++  AIGVKWVYK K +  G VQ+YKARLV
Sbjct: 841  AIGKKSWRNAMDEEIEAIKKNDTWELVSLPKEHTAIGVKWVYKAKKDSKGEVQRYKARLV 900

Query: 2963 AKGYAQQYGIDYSETFAPVARLDTIRALIALAAQKQWKIYQLDVKFAFLNGYLEEEIYVE 2784
            AKGY+Q+ GIDY E FAPVARL+T+R +I+LAAQ  WKI+Q+DVK AFLNG LEEE+Y+E
Sbjct: 901  AKGYSQRAGIDYDEVFAPVARLETVRLIISLAAQNNWKIHQMDVKSAFLNGVLEEEVYIE 960

Query: 2783 QPQGFVVQGKEDKVLRLKKALYGLKQAPRAWYSRIDDYFTELGFRRSQSEPTLYIKTQGT 2604
            QPQG+ V+G+EDKVLRLKKALYGLKQAPRAW  RID YF E+ F +   E  LYIK QG 
Sbjct: 961  QPQGYEVKGEEDKVLRLKKALYGLKQAPRAWNVRIDKYFKEVNFIKCPYEHALYIKAQG- 1019

Query: 2603 NNTLIVSLYVDDLIFTGNNENMIMEFKEDMMKTFEMTDLGLMHYFLGIEIHQRKDGIFIS 2424
             + LIV LYVDDLIFTGNN +M  EFK+DM K FEMTD+GLM Y+LGIE+ Q  +GIFI+
Sbjct: 1020 KDILIVCLYVDDLIFTGNNPSMFEEFKKDMTKEFEMTDMGLMAYYLGIEVKQGNEGIFIT 1079

Query: 2423 QKKYAESLLKRFKMEGCKTVATPLDNNKALKKEDGSPKAD 2304
            Q+ YA+ LLK+FK++    V TP++    L K++   K D
Sbjct: 1080 QESYAKDLLKKFKLDDANPVGTPMECGIKLSKDEEGEKVD 1119



 Score =  204 bits (518), Expect = 4e-49
 Identities = 92/185 (49%), Positives = 134/185 (72%)
 Frame = -1

Query: 2275 PSQIHYGAAKRVLRYLEGTKNYGIWYEPVTNSKLIGYTDSDWAGSIDDMKSTSGYAFTLG 2096
            P+  H   AKR+LRY++GT ++G++Y    + KL+GY+DSDW+G +DD KSTSG+ F +G
Sbjct: 1154 PTTTHLKTAKRILRYIKGTTSFGLYYSNSNDYKLVGYSDSDWSGDMDDRKSTSGFVFYMG 1213

Query: 2095 SEIFSWASKKQATVAQSSAEAEYIAAAMTTSQAIWLKRILEDMGEVQEKATKIFCDSKSA 1916
               F+W SKKQ  V  S+ EAEY+AA      AIWL+ +L+++   Q + TKI+ D+KSA
Sbjct: 1214 DTAFTWMSKKQPIVTLSTCEAEYVAATSCVCHAIWLRNLLKELSLPQVEPTKIYVDNKSA 1273

Query: 1915 IAMAKNPVFHNRTKHIKIKYHFIREAEANSEIELEHCKTDEQLADIFTKALPRGKFEILR 1736
            IA+AKNPVFH+R+KHI  +YH+IRE  +N ++++E+ KT +Q+ADIFTK L +  F  LR
Sbjct: 1274 IALAKNPVFHDRSKHIHTRYHYIRECISNKDVQMEYVKTHDQVADIFTKPLKKEVFMKLR 1333

Query: 1735 DMIGV 1721
             ++GV
Sbjct: 1334 SLLGV 1338


>emb|CAN80930.1| hypothetical protein VITISV_005279 [Vitis vinifera]
          Length = 1291

 Score =  972 bits (2512), Expect = 0.0
 Identities = 515/1111 (46%), Positives = 687/1111 (61%), Gaps = 18/1111 (1%)
 Frame = -3

Query: 5570 MADTFRSSIPIPVFRGENYDFWSIKMKTYFCAQDLWDIVNNGYTIPNDISTLSAVQKKEF 5391
            M  +   S  IPVF GE+Y  W++KM+ Y  +Q LW++V +    P   +  +  Q K +
Sbjct: 1    MTPSSNISSVIPVFNGEHYHIWAVKMRFYLRSQGLWNVVMSEADPPPLGANPTVAQMKAY 60

Query: 5390 KENQQKDXXXXXXXXXXXADEYFPRIMGAKTAKEAWDKLQEEFQGNEKVRATRLQTLRRK 5211
            +E + K            AD  F +IM  +T K+ WDKLQ EF+G+E+V+  RL TL+R+
Sbjct: 61   EEEKLKKDKAITCLHSGLADHIFTKIMNLETPKQVWDKLQGEFEGSERVKNVRLLTLKRE 120

Query: 5210 FENLKMLDSETAKDYYSRVNEVVNQLRAYGENFPESKIVSKILITCTEKYDPIIAAIEES 5031
            FE +KM D E+ KDY  R+ +VVNQ+R  GE F + K+V KI+++  +K++  I+AIEES
Sbjct: 121  FELMKMKDDESVKDYSGRLMDVVNQMRLLGEAFTDQKVVEKIMVSVPQKFEAKISAIEES 180

Query: 5030 KDIEKLTATELMGSLEAHEKRLERRYEKDIDNAFQSKL------SMQSQKNKKNGRKYNE 4869
             D++ LT  EL   L A E+R+  R ++  + AFQ+        ++Q +K  KN R   E
Sbjct: 181  CDLQTLTIVELTSKLHAQEQRVLMRGDEATEGAFQANHKGKNSGNLQGKKFFKNSRGKAE 240

Query: 4868 GKPTDNNDKFPPCGICKRKSHLEKDCWFKGKP--QCQNCKKFGHVEKSCRLKQR------ 4713
            G  +    KF PC  CKR +H EKDCW KGKP   C  C K GH EK CR K++      
Sbjct: 241  G--SSRKGKFLPCSHCKRTNHAEKDCWHKGKPLFNCNFCNKLGHSEKYCRAKKKQSQQQP 298

Query: 4712 --HQANFSENTEFENNLFYVCQAASEENKDTWYLDSGCSNHMTKNESIFCQLDK-ISTKI 4542
              H +   E+   + +LF   QA S    +TW +DSGC++HMTK+ SIF  +D+ +  K+
Sbjct: 299  EQHASVTEEDKNDDEHLFMASQALSSHELNTWLIDSGCTSHMTKHLSIFTSIDRSVQPKV 358

Query: 4541 KIGNGDYMEATGKGTIAIDTKKGKRYINEVLLVPTIDQNLLSVGQMMEKGYSLYFEGDSC 4362
            K+GNG+ ++A GKGTIAI TKKG +    VL +P +DQNLLSV QM+  GY++ F+ + C
Sbjct: 359  KLGNGEVVQAKGKGTIAISTKKGTKIXTNVLYIPDLDQNLLSVAQMLRNGYAISFKENFC 418

Query: 4361 TIYDKKDKSLVITKVKMRENRCFPIQWRYANDAAMTAQVNDTWLWHRRFGHFNLQGLKIL 4182
             I D       I K+KM  N  F ++         +A+++++ +WH+R+GHFNL+ L+ +
Sbjct: 419  FISDVHGTE--IAKIKMNGNS-FYLKLDLVEGHVFSAKIDESVVWHKRYGHFNLKSLRFM 475

Query: 4181 NQKNMMRDLPTIKELDGVCEGCMLGKQHRQPFPSGKAWRAKKPLELVHTDICGPMRTPSN 4002
             +  M+ D+P I      CE C LGKQ RQPFP   + RA   LEL+H+DICGPM T S 
Sbjct: 476  QEAGMVEDMPEISVNAQTCESCELGKQQRQPFPQNMSKRATHKLELIHSDICGPMSTTSL 535

Query: 4001 EQNRYFILFIDDYTRMTWVYFLREKSQVFDIFKKFKAYVEKQSGHKIKTIRSDRGKEYTS 3822
              N YF LFIDD++RMTWVYFL+ KSQV  +FK FK  VE QSG  +K            
Sbjct: 536  SNNVYFALFIDDFSRMTWVYFLKTKSQVLSMFKSFKKMVETQSGQNVKGASE-------- 587

Query: 3821 TQFTKFCEDEGVEHQLTVGYAPEQNGVSERKNRTVMETARSMLMEKGLPKSFWAEAVSTA 3642
                       +  +LT  Y+P+QNGVSERKNRTVME AR ML EK LPK  WAEAV+T+
Sbjct: 588  -----------LIMELTTPYSPQQNGVSERKNRTVMEMARCMLFEKKLPKLLWAEAVNTS 636

Query: 3641 VYLLNRCPTKAVQDKTPVEAWSRRKPSAKHLRVFGCICYVHIPQQKRGKLDEKTEKCIFL 3462
            VYLLNR PTK+VQ KTP+EAWS  KPS KHL+VFG  CY+H+P  KRGKLDE+ EK +F+
Sbjct: 637  VYLLNRLPTKSVQSKTPIEAWSGVKPSVKHLKVFGSFCYLHVPSVKRGKLDERAEKGVFV 696

Query: 3461 GYSTQSKGYRVYSLSTRKLIISRDVMFDEDAAYNWETNQVEKRSINLPKLTHEQ-EETSN 3285
            GY+ +SKGYR+YSLS  K++ISRDV FDE++ +NW+  +V K     P +     E T  
Sbjct: 697  GYAAESKGYRIYSLSRMKIVISRDVHFDENSYWNWDLKKVHKCDQTTPSILEPAIESTII 756

Query: 3284 DPPETPERAXXXXXXXXXXXXXXXTRSLREIYQTCNLTIMEPDSYEAAAKQEVWVKAXXX 3105
            + P   E                  R L ++Y+ CNL   EP  Y  AA+   W++A   
Sbjct: 757  EGPLDVEATSDTPVLKM--------RPLSDVYERCNLVHAEPTCYTEAARFLEWIEAMKA 808

Query: 3104 XXXXXXKNETWELTDLPQDKEAIGVKWVYKTKLNPDGSVQKYKARLVAKGYAQQYGIDYS 2925
                  +N TW+LT+LP+ K AIGVKWV++TK N DGS+ ++KARLV KG+AQ  G+DY 
Sbjct: 809  EIDAIERNGTWKLTELPEAKNAIGVKWVFRTKFNSDGSIFRHKARLVVKGFAQVAGVDYG 868

Query: 2924 ETFAPVARLDTIRALIALAAQKQWKIYQLDVKFAFLNGYLEEEIYVEQPQGFVVQGKEDK 2745
            +TFAPVAR DTIR L+ALA Q+ WK+Y LDVK AFLNG L EEIYV+QP+GF V G E K
Sbjct: 869  DTFAPVARHDTIRLLLALAGQRGWKVYHLDVKSAFLNGILLEEIYVQQPEGFEVIGHEHK 928

Query: 2744 VLRLKKALYGLKQAPRAWYSRIDDYFTELGFRRSQSEPTLYIKTQGTNNTLIVSLYVDDL 2565
            V +L KALYGLKQAPRAWYSRID +  +LGFRRS++E TLY+K                 
Sbjct: 929  VYKLHKALYGLKQAPRAWYSRIDSHLIQLGFRRSENEATLYLK----------------- 971

Query: 2564 IFTGNNENMIMEFKEDMMKTFEMTDLGLMHYFLGIEIHQRKDGIFISQKKYAESLLKRFK 2385
                         + D    FEM+DLG+M+YFLG+EI+Q   GIFISQ+KYA  +LK+FK
Sbjct: 972  -------------QNDDFDVFEMSDLGIMNYFLGMEIYQCSWGIFISQRKYAMDILKKFK 1018

Query: 2384 MEGCKTVATPLDNNKALKKEDGSPKADNSQF 2292
            +E CK VATPL  N+ + K DG    + S +
Sbjct: 1019 LESCKEVATPLAQNEKISKNDGEKLEEPSAY 1049



 Score =  233 bits (594), Expect = 3e-58
 Identities = 108/185 (58%), Positives = 139/185 (75%)
 Frame = -1

Query: 2278 NPSQIHYGAAKRVLRYLEGTKNYGIWYEPVTNSKLIGYTDSDWAGSIDDMKSTSGYAFTL 2099
            +PS +H G AKRVL+Y++GT N GIWY      KL GY DSDWAGS+DDMKSTSGYAFT+
Sbjct: 1079 SPSNVHMGVAKRVLKYVKGTTNLGIWYLKSGGVKLNGYADSDWAGSVDDMKSTSGYAFTI 1138

Query: 2098 GSEIFSWASKKQATVAQSSAEAEYIAAAMTTSQAIWLKRILEDMGEVQEKATKIFCDSKS 1919
            GS +  W S+KQ  VAQS+ EAEYI+ A   +QAIWL+++L D+G  Q   T+++CD+KS
Sbjct: 1139 GSGVICWNSRKQEVVAQSTTEAEYISLAAAANQAIWLRKLLADLGREQSSPTELYCDNKS 1198

Query: 1918 AIAMAKNPVFHNRTKHIKIKYHFIREAEANSEIELEHCKTDEQLADIFTKALPRGKFEIL 1739
            AI++A+NPV H RTKHI +K+H IREAE NS ++L +C TDEQLADI TK L + + E L
Sbjct: 1199 AISIAQNPVHHGRTKHINVKFHSIREAEKNSLVKLHYCSTDEQLADIMTKGLLKSRLEFL 1258

Query: 1738 RDMIG 1724
            R  +G
Sbjct: 1259 RLKLG 1263


>emb|CAN79061.1| hypothetical protein VITISV_024577 [Vitis vinifera]
          Length = 1424

 Score =  972 bits (2512), Expect = 0.0
 Identities = 471/832 (56%), Positives = 605/832 (72%), Gaps = 22/832 (2%)
 Frame = -3

Query: 4721 KQRHQANFSENTEFENNLFYVCQAASEENKDTWYLDSGCSNHMTKNESIFCQLDK-ISTK 4545
            K   QA+ +E  E + N+FY CQ+ +E+  + W+LDSGC+NHMT N++IF  +D  I+++
Sbjct: 388  KNNQQASCAEEKEADENMFYACQSVAEQKNNVWFLDSGCTNHMTGNKNIFLDMDTTINSQ 447

Query: 4544 IKIGNGDYMEATGKGTIAIDTKKGKRYINEVLLVPTIDQNLLSVGQMMEKGYSLYFEGDS 4365
            +K+GNGD +   GKGT+ I  K G +YI +VLLVP ++Q LLSVGQ++E GY L+FE + 
Sbjct: 448  VKMGNGDLVNVKGKGTVGIQXKVGTKYIRDVLLVPALEQXLLSVGQLVEHGYKLHFENNE 507

Query: 4364 CTIYDKKDKSLVITKVKMRENRCFPIQWRYANDAAMTAQ-VNDTWLWHRRFGHFNLQGLK 4188
            CTIYDK+ +  ++ K+KM +NR FPI ++Y  + A+  + V + WLWHRRFGH N   LK
Sbjct: 508  CTIYDKEQRRNLVKKIKMEKNRSFPIVFKYVENVALRMEDVEEAWLWHRRFGHLNFNSLK 567

Query: 4187 ILNQKNMMRDLPTIKELDGVCEGCMLGKQHRQPFPSGKAWRAKKPLELVHTDICGPMRTP 4008
            +L Q+ M                      HRQ FP G AWRAKK LELVHTDICGPM TP
Sbjct: 568  MLCQRKM---------------------HHRQSFPKGVAWRAKKVLELVHTDICGPMSTP 606

Query: 4007 SNEQNRYFILFIDDYTRMTWVYFLREKSQVFDIFKKFKAYVEKQSGHKIKTIRSDRGKEY 3828
            S   N+YF+LFIDD+TRMTWV+F+++KS+VF IFKKFK++VEKQSG  IKT+RSDRG EY
Sbjct: 607  SQGNNKYFVLFIDDFTRMTWVFFMKQKSEVFSIFKKFKSFVEKQSGCYIKTLRSDRGMEY 666

Query: 3827 TSTQFTKFCEDEGVEHQLTVGYAPEQNGVSERKNRTVMETARSMLMEKGLPKSFWAEAVS 3648
            TS+QF  FCEDEGVE QLTV Y P+QNGV ERKN+TVME A++ML EKGLPK FWAEAV+
Sbjct: 667  TSSQFGNFCEDEGVERQLTVAYTPQQNGVVERKNQTVMEMAKAMLYEKGLPKIFWAEAVN 726

Query: 3647 TAVYLLNRCPTKAVQDKTPVEAWSRRKPSAKHLRVFGCICYVHIPQQKRGKLDEKTEKCI 3468
            TAVYLLNRCPTKA+ +KTP+EAWS RKPS +H +VFGC+CY  +P+Q+R KLDE +EKCI
Sbjct: 727  TAVYLLNRCPTKALLNKTPIEAWSGRKPSVRHFKVFGCLCYSQVPKQRRSKLDETSEKCI 786

Query: 3467 FLGYSTQSKGYRVYSLSTRKLIISRDVMFDEDAAYNWETNQVEKRSINLPKL-------- 3312
            F+GYS+QSKGYR+Y+L T KLIISRDV+FDE  A+NWE  ++ K++I + +L        
Sbjct: 787  FMGYSSQSKGYRLYNLKTXKLIISRDVIFDEKVAWNWEEGKILKKTILVDELQTKAPVET 846

Query: 3311 ------THEQEETSNDPPETPERAXXXXXXXXXXXXXXXTRSLREIYQTCNLTIMEPDSY 3150
                  T   +E+    P +P                   RSL ++Y+ CNL I+EP S+
Sbjct: 847  GNGSTSTSSPQESPRSVPLSPSIESPTSXSSSPSSTPRKMRSLTDVYERCNLCIVEPQSF 906

Query: 3149 EAAAKQEVWVKAXXXXXXXXXKNETWELTDLPQDKEAIGVKWVYKT------KLNPDGSV 2988
            E A K E W KA         KNETW+L + P+DKE IGVKW+++       K + DG V
Sbjct: 907  EEAIKDEDWRKAMEKEIDVIEKNETWQLVEKPKDKEIIGVKWIFRVKWIFRXKYHSDGRV 966

Query: 2987 QKYKARLVAKGYAQQYGIDYSETFAPVARLDTIRALIALAAQKQWKIYQLDVKFAFLNGY 2808
            Q+ KARLVAKGY+QQ G D+ ETFAPVARLDTIR +IA+AAQK W +YQLD+K AFLNG 
Sbjct: 967  QRLKARLVAKGYSQQPGXDFHETFAPVARLDTIRTIIAVAAQKGWLLYQLDIKSAFLNGK 1026

Query: 2807 LEEEIYVEQPQGFVVQGKEDKVLRLKKALYGLKQAPRAWYSRIDDYFTELGFRRSQSEPT 2628
            LE EIYVEQPQGFVV G+E+KV +LKKALYGLKQAPRAWY++ID YF E GF RS+SEPT
Sbjct: 1027 LEXEIYVEQPQGFVVDGEENKVYKLKKALYGLKQAPRAWYTQIDSYFIENGFIRSKSEPT 1086

Query: 2627 LYIKTQGTNNTLIVSLYVDDLIFTGNNENMIMEFKEDMMKTFEMTDLGLMHYFLGIEIHQ 2448
            LY+K++  +  LIV+LYVDDLIFTGN+E M+ +F+ +MMK +EM+D+GL+HYFLGIE++Q
Sbjct: 1087 LYVKSKDNSQILIVALYVDDLIFTGNDEKMVEKFRNEMMKKYEMSDMGLLHYFLGIEVYQ 1146

Query: 2447 RKDGIFISQKKYAESLLKRFKMEGCKTVATPLDNNKALKKEDGSPKADNSQF 2292
             +DG+FI QK+Y E +LK+F M GC  V+TPL  N+ L+KEDG    D + F
Sbjct: 1147 EEDGVFICQKRYVEHILKKFGMAGCNXVSTPLVVNEKLRKEDGGKMVDETHF 1198



 Score =  244 bits (623), Expect = 1e-61
 Identities = 120/193 (62%), Positives = 150/193 (77%)
 Frame = -1

Query: 2275 PSQIHYGAAKRVLRYLEGTKNYGIWYEPVTNSKLIGYTDSDWAGSIDDMKSTSGYAFTLG 2096
            PS +H GAAKRVLRYL+GT   GI Y      KLIG+ DSDW G IDDMKSTSGYAF+LG
Sbjct: 1229 PSHLHLGAAKRVLRYLQGTVELGIKYFRNIEVKLIGHCDSDWGGCIDDMKSTSGYAFSLG 1288

Query: 2095 SEIFSWASKKQATVAQSSAEAEYIAAAMTTSQAIWLKRILEDMGEVQEKATKIFCDSKSA 1916
            S + SW SKKQ +VAQSSAEAEYI+A++ TSQAIWL+RILED+ E Q +AT + CD+KSA
Sbjct: 1289 SGVISWVSKKQGSVAQSSAEAEYISASLATSQAIWLRRILEDIKEKQNEATYLLCDNKSA 1348

Query: 1915 IAMAKNPVFHNRTKHIKIKYHFIREAEANSEIELEHCKTDEQLADIFTKALPRGKFEILR 1736
            IA+AKN VFH+RT+HI +KYHFI+E  ++ E++L +CK++EQ ADIFTKALP  K    R
Sbjct: 1349 IAIAKNXVFHSRTRHIAVKYHFIKEVISDGEVQLMYCKSEEQXADIFTKALPLEKLVHFR 1408

Query: 1735 DMIGVTEICTKEE 1697
             ++GV E+  + E
Sbjct: 1409 KLLGVEELHIRGE 1421



 Score =  182 bits (462), Expect = 2e-42
 Identities = 92/212 (43%), Positives = 132/212 (62%)
 Frame = -3

Query: 5531 FRGENYDFWSIKMKTYFCAQDLWDIVNNGYTIPNDISTLSAVQKKEFKENQQKDXXXXXX 5352
            F GENYDFW +KMKT F +QD+WD+V NG+  P        V+K + KE ++ D      
Sbjct: 214  FNGENYDFWCVKMKTLFMSQDVWDLVENGFDEP-------PVEKXQLKELKKMDAKALLF 266

Query: 5351 XXXXXADEYFPRIMGAKTAKEAWDKLQEEFQGNEKVRATRLQTLRRKFENLKMLDSETAK 5172
                  +  FPRIM A  AKEAWD LQ+EFQG+++ R+ +LQ LRR+ EN+KM ++ET  
Sbjct: 267  IQQGVGNNIFPRIMRASKAKEAWDILQQEFQGDKRTRSVKLQALRRELENMKMKENETLN 326

Query: 5171 DYYSRVNEVVNQLRAYGENFPESKIVSKILITCTEKYDPIIAAIEESKDIEKLTATELMG 4992
            ++ S+  E+VNQ+++YGE   + +IV K+LI+   K+DPI+A IEE+KD+  L+A EL G
Sbjct: 327  EFSSKFMELVNQMKSYGEEISDKRIVEKLLISLPSKFDPIVAVIEETKDLSLLSAQELFG 386

Query: 4991 SLEAHEKRLERRYEKDIDNAFQSKLSMQSQKN 4896
                 +       E D +N F +  S+  QKN
Sbjct: 387  FKNNQQASCAEEKEAD-ENMFYACQSVAEQKN 417


>gb|KYP69041.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1342

 Score =  971 bits (2511), Expect = 0.0
 Identities = 507/1120 (45%), Positives = 712/1120 (63%), Gaps = 41/1120 (3%)
 Frame = -3

Query: 5540 IPVFRGENYDFWSIKMKTYFCAQDLWDIVNNGYTIPNDISTLSAVQKKEFKENQQKDXXX 5361
            +P+    NYD WS++M     A D+W++V  G+T P ++ +LS  QK   ++++++D   
Sbjct: 10   VPMLTKSNYDNWSLRMVALLGAHDVWEVVEKGHTEPENVESLSQAQKDSLRDSRKRDKKA 69

Query: 5360 XXXXXXXXADEYFPRIMGAKTAKEAWDKLQEEFQGNEKVRATRLQTLRRKFENLKMLDSE 5181
                     ++ F +I G KTAKEAW+KL+  ++G ++V+  RLQTLR +FE L M + E
Sbjct: 70   LCLIYQGLDEDTFEKISGVKTAKEAWEKLKISYKGADQVKKVRLQTLRGEFEALHMKEGE 129

Query: 5180 TAKDYYSRVNEVVNQLRAYGENFPESKIVSKILITCTEKYDPIIAAIEESKDIEKLTATE 5001
               DY+SRV  V N L+  GE   + +I+ KIL +   K++ I+   EE+KD+E ++  +
Sbjct: 130  LVSDYFSRVLTVTNNLKRNGEKLDDVRIMEKILRSLDPKFEHIVTITEETKDLEAMSIEQ 189

Query: 5000 LMGSLEAHEKRLERRYEKDIDNAFQSKLSMQSQKNKKN------------GRKYNEG--- 4866
            L+GSL+A+E++ +++ E+ ++  F++ +  + ++N  N            GR Y  G   
Sbjct: 190  LLGSLQAYEEKKKKK-EEIVEQVFKAHVDSRKEENAHNQSRRSYSQEQGRGRAYGHGQGR 248

Query: 4865 KPTDNNDKFPPCGICKRKSHLEKDCWFKGKPQCQNCKKFGHVEKSCRL----KQRHQANF 4698
            +P +NN +       + + +     + K + +C NC KFGH    CR     K   +AN+
Sbjct: 249  RPNNNNQRGESSNRGRGRGN-PNSRYDKSRIKCYNCNKFGHYASECRAPNKNKVEEKANY 307

Query: 4697 SENTEFENNLFYVCQAASEENKDT-WYLDSGCSNHMTKNESIFCQLDK-ISTKIKIGNGD 4524
            +E    E+    +     ++ +D  WYLDSG SNHM    S+F +LD+ +   +  G+  
Sbjct: 308  AEERCQEDGTLLLAYKGQDKGEDNQWYLDSGASNHMCGKRSMFVELDESVKGNVAFGDES 367

Query: 4523 YMEATGKGTIAIDTKKGK-RYINEVLLVPTIDQNLLSVGQMMEKGYSLYFEGDSCTIYDK 4347
             +   GKG + I  K G+ ++I+ V  VP++  N+LS+GQ++EKGY +  + ++ +I D 
Sbjct: 368  KVAVEGKGNVLIRLKNGEHQFISNVYYVPSMKSNILSLGQLLEKGYDIQLKNNNLSIRD- 426

Query: 4346 KDKSLVITKVKMRENRCFPIQWRYANDAAMTAQVND-TWLWHRRFGHFNLQGLKILNQKN 4170
             + S  I KV M  NR F +  +      +     D +WLWH RFGH N +GL++L++K 
Sbjct: 427  -NTSRFIAKVPMTRNRMFVLNIQSDGPQCLKMCYKDQSWLWHLRFGHLNFKGLELLSKKA 485

Query: 4169 MMRDLPTIKELDGVCEGCMLGKQHRQPFPSGKAWRAKKPLELVHTDICGPMRTPSNEQNR 3990
            M+R LP I   + VCEGC+LGKQ R  FP     RA+KPLEL+HTD+CGP++  S  ++ 
Sbjct: 486  MVRGLPCITHPNQVCEGCLLGKQFRLSFPKESDSRAQKPLELIHTDVCGPIKPRSLGKSN 545

Query: 3989 YFILFIDDYTRMTWVYFLREKSQVFDIFKKFKAYVEKQSGHKIKTIRSDRGKEYTSTQFT 3810
            YF+LFIDD++R TWVYFL+EKS+VF+ FKKFKA+VEK+SG  IK +RSDRG E+TS +F 
Sbjct: 546  YFLLFIDDFSRKTWVYFLKEKSEVFENFKKFKAHVEKESGLLIKALRSDRGGEFTSKEFQ 605

Query: 3809 KFCEDEGVEHQLTVGYAPEQNGVSERKNRTVMETARSMLMEKGLPKSFWAEAVSTAVYLL 3630
            K+CED G+  QLTV  +P+QNGV+ERKNRT++E ARSML  K LPK FWAEAV+ AVYL 
Sbjct: 606  KYCEDNGIRRQLTVPRSPQQNGVAERKNRTILEMARSMLKSKKLPKEFWAEAVACAVYLT 665

Query: 3629 NRCPTKAVQDKTPVEAWSRRKPSAKHLRVFGCICYVHIPQQKRGKLDEKTEKCIFLGYST 3450
            NR PT++V  KTP EAWS RKP   HLRVFG I +VH+P +KR KLD+K+EK IF+GY  
Sbjct: 666  NRSPTRSVSGKTPQEAWSGRKPGISHLRVFGSIAHVHVPDEKRSKLDDKSEKYIFIGYDA 725

Query: 3449 QSKGYRVYSLSTRKLIISRDVMFDEDAAYNWETN--------QVEKRSINLPKLTHEQEE 3294
             SKGY++Y+  +RK IISR+V+FDE+  ++W TN         VE+  +   +   + +E
Sbjct: 726  NSKGYKLYNPDSRKTIISRNVVFDEEGEWDWSTNCEDHTFFPCVEEDDV---EQQQQPQE 782

Query: 3293 TSNDPPETPERAXXXXXXXXXXXXXXXTRSLREIYQT----------CNLTIMEPDSYEA 3144
            T   PP +P                   RSL+EIY+           C     EP +++ 
Sbjct: 783  TPTTPPTSPNTT--LQDYESSSERMPRFRSLQEIYEATENLDNVTLFCLFADCEPMNFQE 840

Query: 3143 AAKQEVWVKAXXXXXXXXXKNETWELTDLPQDKEAIGVKWVYKTKLNPDGSVQKYKARLV 2964
            A  ++ W  A         KN+TWEL  LP++  AIGVKWVYK K +  G VQ+YKARLV
Sbjct: 841  AIGKKSWRNAMDEEIEAIKKNDTWELVSLPKEHTAIGVKWVYKAKKDSKGEVQRYKARLV 900

Query: 2963 AKGYAQQYGIDYSETFAPVARLDTIRALIALAAQKQWKIYQLDVKFAFLNGYLEEEIYVE 2784
            AKGY+Q+ GIDY E FAPVARL+T+R +I+LAAQ  WKI+Q+DVK AFLNG LEEE+Y+E
Sbjct: 901  AKGYSQRAGIDYDEVFAPVARLETVRLIISLAAQNNWKIHQMDVKSAFLNGVLEEEVYIE 960

Query: 2783 QPQGFVVQGKEDKVLRLKKALYGLKQAPRAWYSRIDDYFTELGFRRSQSEPTLYIKTQGT 2604
            QPQG+ V+G+EDKVLRLKKALYGLKQAPRAW  RID YF E  F +   E  LYIK QG 
Sbjct: 961  QPQGYEVKGEEDKVLRLKKALYGLKQAPRAWNVRIDKYFKEANFIKCPYEHALYIKAQG- 1019

Query: 2603 NNTLIVSLYVDDLIFTGNNENMIMEFKEDMMKTFEMTDLGLMHYFLGIEIHQRKDGIFIS 2424
             + LIV LYVDDLIFTGNN +M  EFK+DM K FEMTD+GLM Y+LGIE+ Q  +GIFI+
Sbjct: 1020 KDILIVCLYVDDLIFTGNNPSMFEEFKKDMTKEFEMTDMGLMAYYLGIEVKQGNEGIFIT 1079

Query: 2423 QKKYAESLLKRFKMEGCKTVATPLDNNKALKKEDGSPKAD 2304
            Q+ YA+ LLK+FK++    V TP++    L K++   K D
Sbjct: 1080 QESYAKDLLKKFKLDDANPVGTPMECGIKLSKDEEGEKVD 1119



 Score =  204 bits (518), Expect = 4e-49
 Identities = 92/185 (49%), Positives = 134/185 (72%)
 Frame = -1

Query: 2275 PSQIHYGAAKRVLRYLEGTKNYGIWYEPVTNSKLIGYTDSDWAGSIDDMKSTSGYAFTLG 2096
            P+  H   AKR+LRY++GT ++G++Y    + KL+GY+DSDW+G +DD KSTSG+ F +G
Sbjct: 1154 PTTTHLKTAKRILRYIKGTTSFGLYYSNSNDYKLVGYSDSDWSGDMDDRKSTSGFVFYMG 1213

Query: 2095 SEIFSWASKKQATVAQSSAEAEYIAAAMTTSQAIWLKRILEDMGEVQEKATKIFCDSKSA 1916
               F+W SKKQ  V  S+ EAEY+AA      AIWL+ +L+++   Q + TKI+ D+KSA
Sbjct: 1214 DTAFTWMSKKQPIVTLSTCEAEYVAATSCVCHAIWLRNLLKELSLPQVEPTKIYVDNKSA 1273

Query: 1915 IAMAKNPVFHNRTKHIKIKYHFIREAEANSEIELEHCKTDEQLADIFTKALPRGKFEILR 1736
            IA+AKNPVFH+R+KHI  +YH+IRE  +N ++++E+ KT +Q+ADIFTK L +  F  LR
Sbjct: 1274 IALAKNPVFHDRSKHIHTRYHYIRECISNKDVQMEYVKTHDQVADIFTKPLKKEVFMKLR 1333

Query: 1735 DMIGV 1721
             ++GV
Sbjct: 1334 SLLGV 1338


>emb|CAN71759.1| hypothetical protein VITISV_020777 [Vitis vinifera]
          Length = 1472

 Score =  971 bits (2509), Expect = 0.0
 Identities = 497/1086 (45%), Positives = 697/1086 (64%), Gaps = 3/1086 (0%)
 Frame = -3

Query: 5540 IPVFRGENYDFWSIKMKTYFCAQDLWDIVNNGYTIPNDISTLSAVQKKEFKENQQKDXXX 5361
            IP+F+GE Y+FWSIKMKT F +QDLWD+V NGY  P++ + L        KEN +KD   
Sbjct: 16   IPIFKGECYEFWSIKMKTLFKSQDLWDLVENGYPYPDEEARL--------KENTKKDSKA 67

Query: 5360 XXXXXXXXADEYFPRIMGAKTAKEAWDKLQEEFQGNEKVRATRLQTLRRKFENLKMLDSE 5181
                     +  F +I    TAKEAW  L+  FQG+ KV   +LQ+LRR FE L M + E
Sbjct: 68   LFFIQQAVHESIFSKIAAXTTAKEAWTTLKTAFQGSSKVITVKLQSLRRDFETLHMKNGE 127

Query: 5180 TAKDYYSRVNEVVNQLRAYGENFPESKIVSKILITCTEKYDPIIAAIEESKDIEKLTATE 5001
            + +D+ SRV  +VNQ+R+YGE+  +  +V+K+L + T K+D ++AAIEESKD+   +  E
Sbjct: 128  SVQDFLSRVAAIVNQMRSYGEDILDQTVVAKVLRSLTPKFDHVVAAIEESKDLSTYSFDE 187

Query: 5000 LMGSLEAHEKRLERRYEKDIDNAFQSKLSMQSQKNKKNGRKYNEGKPTDNNDKFPPCGIC 4821
            LMGSL++HE RL R  EK+ +  F +K     QKN   G +   G+           G  
Sbjct: 188  LMGSLQSHEVRLSRTEEKNEEKXFYTKGETSDQKN---GGREATGRGCGRGGAHGRGGRG 244

Query: 4820 KRKSHLEKDCWFKGKPQCQNCKKFGHVEKSCRLKQRHQANFSENTEFENNLFYVCQAASE 4641
            + +   + +CW K +                   Q  QAN+ E  E +  LF        
Sbjct: 245  RGRGDAQXECWKKER-------------------QEKQANYVEQEEDQVKLFMAYNEEVV 285

Query: 4640 ENKDTWYLDSGCSNHMTKNESIFCQLDKI-STKIKIGNGDYMEATGKGTIAIDTKKGK-R 4467
             + + W+LDSGCSNHMT  +S+F +LD+    K+K+G+   ++  GKGT A++   G  +
Sbjct: 286  SSNNIWFLDSGCSNHMTGIKSLFKELDESHKLKVKLGDDKQVQVEGKGTXAVNNGHGNVK 345

Query: 4466 YINEVLLVPTIDQNLLSVGQMMEKGYSLYFEGDSCTIYDKKDKSLVITKVKMRENRCFPI 4287
             +  V  +P++ QNLLSVGQ+M  GYS+ F+G +C I DKK   +++  V+M  N+ FP+
Sbjct: 346  LLYNVYFIPSLTQNLLSVGQLMVSGYSILFDGATCVIKDKKSDQIIV-BVRMAANKLFPL 404

Query: 4286 QWRYANDAAMTA-QVNDTWLWHRRFGHFNLQGLKILNQKNMMRDLPTIKELDGVCEGCML 4110
            +       A+   + +++ LWH R+GH N++GLK+L++K M+  LP I  ++ VCEGC+ 
Sbjct: 405  EVSSIEKHALVVKETSESNLWHLRYGHLNVKGLKLLSKKEMVFGLPKIDSVN-VCEGCIY 463

Query: 4109 GKQHRQPFPSGKAWRAKKPLELVHTDICGPMRTPSNEQNRYFILFIDDYTRMTWVYFLRE 3930
            GKQ ++PFP G++ RA   LE++H D+CGPM+T S   +RYF+LF DD++RM+WVYFL+ 
Sbjct: 464  GKQSKKPFPKGRSRRASSCLEIIHADLCGPMQTASFGGSRYFLLFTDDHSRMSWVYFLQS 523

Query: 3929 KSQVFDIFKKFKAYVEKQSGHKIKTIRSDRGKEYTSTQFTKFCEDEGVEHQLTVGYAPEQ 3750
            K++ F+ FKKFKA+VEKQSG  IK +R+DRG E+ S  F  F E+EG+  +LT  Y+P Q
Sbjct: 524  KAETFETFKKFKAFVEKQSGKCIKVLRTDRGGEFLSNDFKVFXEEEGLHRELTTPYSPXQ 583

Query: 3749 NGVSERKNRTVMETARSMLMEKGLPKSFWAEAVSTAVYLLNRCPTKAVQDKTPVEAWSRR 3570
            NGV+ERKNRTV+E ARSM+  K L   FWAE V+TAVYLLN  PTKAV ++TP EAW  R
Sbjct: 584  NGVAERKNRTVVEMARSMMKAKNLSNHFWAEGVATAVYLLNISPTKAVLNRTPYEAWYGR 643

Query: 3569 KPSAKHLRVFGCICYVHIPQQKRGKLDEKTEKCIFLGYSTQSKGYRVYSLSTRKLIISRD 3390
            KP   HL+VFG + Y  I    R KLDEK+ KCIF+GY +QSKGY++Y+  + K+I+SR+
Sbjct: 644  KPWVSHLKVFGSVAYTLIDSHNRSKLDEKSVKCIFIGYCSQSKGYKLYNPVSGKIIVSRN 703

Query: 3389 VMFDEDAAYNWETNQVEKRSINLPKLTHEQEETSNDPPETPERAXXXXXXXXXXXXXXXT 3210
            V+FDE A++ W  ++       L +++ E E   ++  +                     
Sbjct: 704  VVFDEKASWTWRVSE----DGALVEISSESEVAQSEDQQ--------------------- 738

Query: 3209 RSLREIYQTCNLTIMEPDSYEAAAKQEVWVKAXXXXXXXXXKNETWELTDLPQDKEAIGV 3030
                    +  +   +P ++E A ++E W  A         KNETWEL +LP+DK  IGV
Sbjct: 739  -------PSXQIPATDPTTFEEAVEKEEWCSAMKEEIAAIEKNETWELVELPEDKNVIGV 791

Query: 3029 KWVYKTKLNPDGSVQKYKARLVAKGYAQQYGIDYSETFAPVARLDTIRALIALAAQKQWK 2850
            KWV++TK   DGS+QK+KARLVAKGYAQQ+G+DY +TF+PVAR +T+R L+ALAA   W 
Sbjct: 792  KWVFRTKYLADGSIQKHKARLVAKGYAQQHGVDYDDTFSPVARFETVRTLLALAAHMHWC 851

Query: 2849 IYQLDVKFAFLNGYLEEEIYVEQPQGFVVQGKEDKVLRLKKALYGLKQAPRAWYSRIDDY 2670
             YQ DVK AFLNG L EE+YV Q +GF+V  KE+ V RLKKALYGLKQAPRAWYS+ID Y
Sbjct: 852  XYQFDVKSAFLNGELVEEVYVSQXEGFIVPXKEEHVYRLKKALYGLKQAPRAWYSKIDSY 911

Query: 2669 FTELGFRRSQSEPTLYIKTQGTNNTLIVSLYVDDLIFTGNNENMIMEFKEDMMKTFEMTD 2490
            F E GF RS+SEP LY+K QG N+ LI+ LYVDD+I+ G++ ++I EFK  M K FEM++
Sbjct: 912  FVENGFERSKSEPNLYLKRQGKNDLLIICLYVDDMIYMGSSSSLINEFKACMKKKFEMSB 971

Query: 2489 LGLMHYFLGIEIHQRKDGIFISQKKYAESLLKRFKMEGCKTVATPLDNNKALKKEDGSPK 2310
            LGL+H+FL +E+ Q +DG+F+SQ+KY   LLK+F M  CK VAT +++N+ L+ EDG+ +
Sbjct: 972  LGLLHFFLXLEVKQVEDGVFVSQRKYXVDLLKKFNMLNCKVVATXMNSNEKLQAEDGTER 1031

Query: 2309 ADNSQF 2292
            AD  +F
Sbjct: 1032 ADARRF 1037



 Score =  187 bits (475), Expect = 5e-44
 Identities = 86/145 (59%), Positives = 110/145 (75%)
 Frame = -1

Query: 2275 PSQIHYGAAKRVLRYLEGTKNYGIWYEPVTNSKLIGYTDSDWAGSIDDMKSTSGYAFTLG 2096
            PS+ H GAAKR+LRY+ GT ++GIWY  V   KL+GYTDSDWAG ++D KSTSGY F+LG
Sbjct: 1068 PSKQHLGAAKRLLRYIVGTYDFGIWYGHVQEFKLVGYTDSDWAGCLEDRKSTSGYMFSLG 1127

Query: 2095 SEIFSWASKKQATVAQSSAEAEYIAAAMTTSQAIWLKRILEDMGEVQEKATKIFCDSKSA 1916
            S    W+SKKQA  A SS+EAEY AA  +  QA+WL+RIL D+ +  E+ T I+CD+K+A
Sbjct: 1128 SGAVCWSSKKQAVTALSSSEAEYTAATSSACQAVWLRRILADINQEHEEPTVIYCDNKAA 1187

Query: 1915 IAMAKNPVFHNRTKHIKIKYHFIRE 1841
            IAM KNP +H RTKH+ I+ HFIR+
Sbjct: 1188 IAMTKNPAYHGRTKHVDIRVHFIRD 1212


>ref|XP_013688817.1| PREDICTED: uncharacterized protein LOC106392554, partial [Brassica
            napus]
          Length = 2682

 Score =  971 bits (2509), Expect(2) = 0.0
 Identities = 508/1144 (44%), Positives = 728/1144 (63%), Gaps = 36/1144 (3%)
 Frame = -3

Query: 5615 FHQWHQSLVRLSGDTMADTFRSSIPIPVFRGENYDFWSIKMKTYFCAQDLWDIVNNGYTI 5436
            ++Q H+ L++++ + +         +P+    NYD WS++M     A D+W+IV  G+  
Sbjct: 1    WYQSHKFLLKMANNGVP------FQVPLLTKSNYDNWSLRMMAILGAHDVWEIVEKGFVE 54

Query: 5435 PNDISTLSAVQKKEFKENQQKDXXXXXXXXXXXADEYFPRIMGAKTAKEAWDKLQEEFQG 5256
            P +   LS  QK   ++++++D            ++ F ++ GAKT+KEAW+KL+  ++G
Sbjct: 55   PENDGGLSQTQKDGLRDSRKRDKKALCLIHQGLDEDTFEKVAGAKTSKEAWEKLRTSYKG 114

Query: 5255 NEKVRATRLQTLRRKFENLKMLDSETAKDYYSRVNEVVNQLRAYGENFPESKIVSKILIT 5076
             E+V+  RLQTLR +FE L+M + E   DY+SRV  V N L+  GE   E +I+ K+L +
Sbjct: 115  AEQVKKVRLQTLRGEFEALQMKEGELISDYFSRVLTVTNNLKRNGEKLDEVRIMEKVLRS 174

Query: 5075 CTEKYDPIIAAIEESKDIEKLTATELMGSLEAHEKRLERRYEKDIDNAFQSKLSMQSQKN 4896
               K++ I+  IEE+KD+E +T  +L+GSL+A+E++ +++ E  ++   + ++  + +  
Sbjct: 175  LDSKFEHIVTIIEETKDLETMTMEQLLGSLQAYEEKKKKK-EDIVEQVLKMRIDHKEESG 233

Query: 4895 KKNGRK---YNEGKPTDNN--------DKFPPCGICKRKSHLE---KDCWFKGKPQCQNC 4758
            + N R+   +  G+    N        D F   G    +       K  + K   +C +C
Sbjct: 234  RSNLRRGGGHFRGRGCGVNGRGWRPYEDNFNQRGENSSRGRGRGNPKSRYDKSSIKCYSC 293

Query: 4757 KKFGHVEKSCRLKQRHQ----ANFSENTEFENNLFYVCQAASEENK-DTWYLDSGCSNHM 4593
             KFGH    C+   +++    +N+ E    E ++  +     E N+   WYLDSG SNHM
Sbjct: 294  GKFGHYASECKTPNKNRVEEKSNYVEERSKEEDMLLMAYKKDEPNEVHKWYLDSGASNHM 353

Query: 4592 TKNESIFCQLDK-ISTKIKIGNGDYMEATGKGTIAIDTKKGK-RYINEVLLVPTIDQNLL 4419
              N+S+F +LD+ + T + +G+   ME  GKG I I  K G  ++I+ V  +P++  N+L
Sbjct: 354  CGNKSMFVELDESVKTDVALGDESRMEVKGKGNILIRLKNGDHQFISNVYYIPSMKTNIL 413

Query: 4418 SVGQMMEKGYSLYFEGDSCTIYDKKDKSLVITKVKMRENRCFPIQWRYANDAAMTAQV-- 4245
            S+GQ++EKGY +  + +S ++ D  +   +ITKV M  NR F +  +  ND A   ++  
Sbjct: 414  SLGQLLEKGYDIRLKDNSLSLRDNANN--LITKVPMSSNRMFVLNIQ--NDIARCLKMCY 469

Query: 4244 -NDTWLWHRRFGHFNLQGLKILNQKNMMRDLPTIKELDGVCEGCMLGKQHRQPFPSGKAW 4068
              ++WLWH RFGH N  GL++L++K M++ LP I   + VCEGC+LGKQ +  FP     
Sbjct: 470  KEESWLWHLRFGHLNFGGLELLSKKEMVKGLPCINHPNQVCEGCLLGKQFKMSFPKESET 529

Query: 4067 RAKKPLELVHTDICGPMRTPSNEQNRYFILFIDDYTRMTWVYFLREKSQVFDIFKKFKAY 3888
            RA+KPLEL+HTD+CGP++  S  ++ YF+LFIDD++R TWVYFL++KS+VF+ FKKFKA+
Sbjct: 530  RARKPLELIHTDVCGPIKPSSLGKSNYFLLFIDDFSRKTWVYFLKQKSEVFENFKKFKAH 589

Query: 3887 VEKQSGHKIKTIRSDRGKEYTSTQFTKFCEDEGVEHQLTVGYAPEQNGVSERKNRTVMET 3708
            VEK+SG KIK++RSDRG E+ S +F K+CED G+  QLTV   P+QNGV+ERKNRT++E 
Sbjct: 590  VEKESGLKIKSMRSDRGGEFMSKEFLKYCEDNGIRRQLTVPRTPQQNGVAERKNRTILEM 649

Query: 3707 ARSMLMEKGLPKSFWAEAVSTAVYLLNRCPTKAVQDKTPVEAWSRRKPSAKHLRVFGCIC 3528
            ARSML  K LPK  WAEAV+ AVY+ NR PTK+V +KTP EAWS RKP   HLRVFG I 
Sbjct: 650  ARSMLKSKKLPKELWAEAVACAVYISNRSPTKSVLEKTPQEAWSGRKPGVSHLRVFGSIA 709

Query: 3527 YVHIPQQKRGKLDEKTEKCIFLGYSTQSKGYRVYSLSTRKLIISRDVMFDEDAAYNWETN 3348
            + H+P +KR KLD+K+EK IF+GY   SKGY++Y+  T+K IISR+V+FDE+  ++W +N
Sbjct: 710  HAHVPDEKRSKLDDKSEKYIFIGYDANSKGYKLYNPETKKTIISRNVIFDEEGEWDWRSN 769

Query: 3347 QVEKRSINLPKLTHEQEETSNDPPETPERA--XXXXXXXXXXXXXXXTRSLREIYQTC-- 3180
              +      P    E  E   + P TP  +                  RSL++IY+    
Sbjct: 770  NEDYNF--FPSFEEENVEQPREEPATPPTSPTTSSQGDESSSERTPRFRSLQDIYEVTEN 827

Query: 3179 --NLTIM------EPDSYEAAAKQEVWVKAXXXXXXXXXKNETWELTDLPQDKEAIGVKW 3024
              NLT+       EP ++E A +++ W  A         KN+TWEL  LP   +AIGVKW
Sbjct: 828  QDNLTLFCLFADCEPMNFEEAQEKKSWRSAMDEEIKSIQKNDTWELASLPNGHKAIGVKW 887

Query: 3023 VYKTKLNPDGSVQKYKARLVAKGYAQQYGIDYSETFAPVARLDTIRALIALAAQKQWKIY 2844
            VYK K N  G V++YKARLVAKGY+Q+ GIDY E FAPVARL+T+R +I+LAAQK W+I+
Sbjct: 888  VYKAKKNSKGEVERYKARLVAKGYSQRAGIDYDEVFAPVARLETVRLIISLAAQKSWRIH 947

Query: 2843 QLDVKFAFLNGYLEEEIYVEQPQGFVVQGKEDKVLRLKKALYGLKQAPRAWYSRIDDYFT 2664
            Q+DVK AFLNG LEEE+Y+EQPQG++V+G+EDKVLRLKKALYGLKQAPRAW +RID YF 
Sbjct: 948  QMDVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKALYGLKQAPRAWNTRIDKYFK 1007

Query: 2663 ELGFRRSQSEPTLYIKTQGTNNTLIVSLYVDDLIFTGNNENMIMEFKEDMMKTFEMTDLG 2484
            E GF +   E  LYIKTQ  N+ LI  LYVDDLIFTGNN  M  +FK +M K FEMTD+G
Sbjct: 1008 EKGFIKCPYEHALYIKTQ-NNDILIACLYVDDLIFTGNNPIMFEDFKMEMTKEFEMTDIG 1066

Query: 2483 LMHYFLGIEIHQRKDGIFISQKKYAESLLKRFKMEGCKTVATPLDNNKALKKEDGSPKAD 2304
            LM Y+LGIE+ Q ++GIFI+Q+ YA+ +LK+FKM+    V TP++    L KE+     D
Sbjct: 1067 LMSYYLGIEVKQEENGIFITQEGYAKEVLKKFKMDDSNPVCTPMECGVKLSKEEEGESVD 1126

Query: 2303 NSQF 2292
             + F
Sbjct: 1127 PTLF 1130



 Score =  966 bits (2497), Expect(2) = 0.0
 Identities = 502/1119 (44%), Positives = 715/1119 (63%), Gaps = 36/1119 (3%)
 Frame = -3

Query: 5540 IPVFRGENYDFWSIKMKTYFCAQDLWDIVNNGYTIPNDISTLSAVQKKEFKENQQKDXXX 5361
            +P+    NYD WS+++     A D+W+IV  G+  P +   LS  QK   ++++++D   
Sbjct: 1359 VPLLTKSNYDNWSLRLMAILGAHDVWEIVEKGFNEPENDGGLSQTQKDGLRDSRKRDKKA 1418

Query: 5360 XXXXXXXXADEYFPRIMGAKTAKEAWDKLQEEFQGNEKVRATRLQTLRRKFENLKMLDSE 5181
                     ++ F ++ GAKT+KEAW+KL+  ++G E+V+  RLQTLR +FE L+M + E
Sbjct: 1419 LCLIYQGLDEDTFEKVAGAKTSKEAWEKLRTSYKGAEQVKKVRLQTLRGEFEALQMKEGE 1478

Query: 5180 TAKDYYSRVNEVVNQLRAYGENFPESKIVSKILITCTEKYDPIIAAIEESKDIEKLTATE 5001
               DY+SRV  V N L+  GE   + +I+ K+L +   K++ I+  IEE+KD+E +T  +
Sbjct: 1479 LISDYFSRVLTVTNNLKRNGEKLDDVRIMEKVLRSLDSKFEHIVTVIEETKDLETMTMEQ 1538

Query: 5000 LMGSLEAHEKRLERRYEKDIDNAFQSKLSMQSQKNKKNGRK---YNEGKPTDNN------ 4848
            L+GSL+A+E++ +++ E  ++   + ++  + +  + + R+   +  G+    N      
Sbjct: 1539 LLGSLQAYEEKKKKK-EDIVEQVLKMRIDHKEESGRNHPRRGGGHFRGRGRGVNGRGWRP 1597

Query: 4847 --DKFPPCGICKRKSHLE---KDCWFKGKPQCQNCKKFGHVEKSCRLKQRHQ----ANFS 4695
              D F   G    +       K  + K   +C +C KFGH    C+    ++    +N+ 
Sbjct: 1598 YEDNFNQRGENSSRGRGRGNPKSRYDKSSIKCYSCGKFGHYASECKTPNNNRVEEKSNYV 1657

Query: 4694 ENTEFENNLFYVCQAASEENK-DTWYLDSGCSNHMTKNESIFCQLDK-ISTKIKIGNGDY 4521
            E    E ++  +     E N+   WYLDSG SNHM  N+S+F +LD+ + T + +G+   
Sbjct: 1658 EERRKEEDMLLMAYKKDEPNEVHKWYLDSGASNHMCGNKSMFVELDESVKTDVALGDESR 1717

Query: 4520 MEATGKGTIAIDTKKGK-RYINEVLLVPTIDQNLLSVGQMMEKGYSLYFEGDSCTIYDKK 4344
            ME  GKG I I  K G  ++I+ V  +P++  N+LS+GQ++EKGY +  + +S ++ D  
Sbjct: 1718 MEVKGKGNILIRLKNGDHQFISNVYYIPSMKTNILSLGQLLEKGYDIRLKDNSLSLRDNA 1777

Query: 4343 DKSLVITKVKMRENRCFPIQWRYANDAAMTAQV---NDTWLWHRRFGHFNLQGLKILNQK 4173
            +   +ITKV M  NR F +  +  ND A   ++    ++WLWH RFGH N  GL++L++K
Sbjct: 1778 NN--LITKVPMSSNRMFVLNIQ--NDIARCLKMCYKEESWLWHLRFGHLNFGGLELLSKK 1833

Query: 4172 NMMRDLPTIKELDGVCEGCMLGKQHRQPFPSGKAWRAKKPLELVHTDICGPMRTPSNEQN 3993
             M++ LP I   + VCEGC+LGKQ +  FP     RA+KPLEL+HTD+CGP++  S  ++
Sbjct: 1834 EMVKGLPCINHPNQVCEGCLLGKQFKMSFPKESETRARKPLELIHTDVCGPIKPSSLGKS 1893

Query: 3992 RYFILFIDDYTRMTWVYFLREKSQVFDIFKKFKAYVEKQSGHKIKTIRSDRGKEYTSTQF 3813
             YF+LFIDD++R TWVYFL++KS+VF+ FKKFKA+VEK+SG KIK++RSDRG E+ S +F
Sbjct: 1894 NYFLLFIDDFSRKTWVYFLKQKSEVFENFKKFKAHVEKESGLKIKSMRSDRGGEFMSKEF 1953

Query: 3812 TKFCEDEGVEHQLTVGYAPEQNGVSERKNRTVMETARSMLMEKGLPKSFWAEAVSTAVYL 3633
             K+CED G+  QLTV   P+QNGV+ERKNRT++E ARSML  K LPK  WAEAV+ AVY+
Sbjct: 1954 LKYCEDNGIRRQLTVPRTPQQNGVAERKNRTILEMARSMLKSKKLPKELWAEAVACAVYI 2013

Query: 3632 LNRCPTKAVQDKTPVEAWSRRKPSAKHLRVFGCICYVHIPQQKRGKLDEKTEKCIFLGYS 3453
             NR PTK+V +KTP EAWS RKP   HLRVFG I + H+P +KR KLD+K+EK IF+GY 
Sbjct: 2014 SNRSPTKSVLEKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRSKLDDKSEKYIFIGYD 2073

Query: 3452 TQSKGYRVYSLSTRKLIISRDVMFDEDAAYNWETNQVEKRSINLPKLTHEQEETSNDPPE 3273
              SKGY++Y+  T+K IISR+V+FDE+  ++W +N  +      P    E  E   + P 
Sbjct: 2074 ANSKGYKLYNPETKKTIISRNVIFDEEGEWDWRSNNEDYNF--FPSFEEENVEQPREEPA 2131

Query: 3272 TPERA--XXXXXXXXXXXXXXXTRSLREIYQTC----NLTIM------EPDSYEAAAKQE 3129
            TP  +                  RSL++IY+      NLT+       EP ++E A +++
Sbjct: 2132 TPPTSPTTSSQGDESSSERTPRFRSLQDIYEVTENQDNLTLFCLFADCEPMNFEEAQEKK 2191

Query: 3128 VWVKAXXXXXXXXXKNETWELTDLPQDKEAIGVKWVYKTKLNPDGSVQKYKARLVAKGYA 2949
             W  A         KN+TWEL  LP   +AIGVKWVYK K N  G V++YKARLVAKGY+
Sbjct: 2192 SWRSAMDEEIKSIQKNDTWELASLPNGHKAIGVKWVYKAKKNSKGEVERYKARLVAKGYS 2251

Query: 2948 QQYGIDYSETFAPVARLDTIRALIALAAQKQWKIYQLDVKFAFLNGYLEEEIYVEQPQGF 2769
            Q+ GIDY E FAPVARL+T+R +I+LAAQK W+I+Q+DVK AFLNG LEEE+Y+EQPQG+
Sbjct: 2252 QRAGIDYDEVFAPVARLETVRLIISLAAQKSWRIHQMDVKSAFLNGDLEEEVYIEQPQGY 2311

Query: 2768 VVQGKEDKVLRLKKALYGLKQAPRAWYSRIDDYFTELGFRRSQSEPTLYIKTQGTNNTLI 2589
            +V+G+EDKVLRLKKALYGLKQAPRAW +RID YF E GF +   E  LYIKTQ  N+ LI
Sbjct: 2312 IVEGEEDKVLRLKKALYGLKQAPRAWNTRIDKYFKEKGFIKCPYEHALYIKTQ-NNDILI 2370

Query: 2588 VSLYVDDLIFTGNNENMIMEFKEDMMKTFEMTDLGLMHYFLGIEIHQRKDGIFISQKKYA 2409
              LYVDDLIFTGNN  M  +FK +M K FEMTD+GLM Y+LGIE+ Q ++GIFI+Q+ YA
Sbjct: 2371 ACLYVDDLIFTGNNPIMFEDFKMEMTKEFEMTDIGLMSYYLGIEVKQEENGIFITQEGYA 2430

Query: 2408 ESLLKRFKMEGCKTVATPLDNNKALKKEDGSPKADNSQF 2292
            + +LK+FKM+    V TP++    L KE+     D + F
Sbjct: 2431 KEVLKKFKMDDSNPVCTPMECGVKLSKEEEGESVDPTLF 2469



 Score =  206 bits (524), Expect(2) = 0.0
 Identities = 93/184 (50%), Positives = 134/184 (72%)
 Frame = -1

Query: 2278 NPSQIHYGAAKRVLRYLEGTKNYGIWYEPVTNSKLIGYTDSDWAGSIDDMKSTSGYAFTL 2099
            +P+  H+ AAKR+LRY++GT N+G++Y    + KL+GY+DSDW G +DD KSTSG+ F +
Sbjct: 2499 HPTTTHFKAAKRILRYIKGTINFGLYYSISDDYKLVGYSDSDWGGDVDDRKSTSGFVFFI 2558

Query: 2098 GSEIFSWASKKQATVAQSSAEAEYIAAAMTTSQAIWLKRILEDMGEVQEKATKIFCDSKS 1919
            G   F+W SKKQ  V  S+ EAEY+AA      AIWL+ +L+D+   QE+ TKIF D+KS
Sbjct: 2559 GETAFTWMSKKQPIVTLSTCEAEYVAATSCVCHAIWLRNLLKDLNLPQEEPTKIFVDNKS 2618

Query: 1918 AIAMAKNPVFHNRTKHIKIKYHFIREAEANSEIELEHCKTDEQLADIFTKALPRGKFEIL 1739
            AIA+AKNPVFH+R+KHI  +YH+IR+     +++L++ KT++Q+ADIFTK L R  F  +
Sbjct: 2619 AIALAKNPVFHDRSKHIDTRYHYIRDCVTKMDVQLKYVKTNDQVADIFTKPLKREDFIKM 2678

Query: 1738 RDMI 1727
            R ++
Sbjct: 2679 RSLL 2682



 Score =  202 bits (514), Expect(2) = 0.0
 Identities = 90/173 (52%), Positives = 128/173 (73%)
 Frame = -1

Query: 2278 NPSQIHYGAAKRVLRYLEGTKNYGIWYEPVTNSKLIGYTDSDWAGSIDDMKSTSGYAFTL 2099
            +P+  H+ AAKR+LRY++GT N+G++Y    + KL+GY+DSDW G +DD KSTSG+ F +
Sbjct: 1160 HPTTTHFKAAKRILRYIKGTINFGLYYSISDDYKLVGYSDSDWGGDVDDRKSTSGFVFFI 1219

Query: 2098 GSEIFSWASKKQATVAQSSAEAEYIAAAMTTSQAIWLKRILEDMGEVQEKATKIFCDSKS 1919
            G   F+W SKKQ  V  S+ EAEY+AA      AIWL+ +L+++   QE+ TKIF D++S
Sbjct: 1220 GETAFTWMSKKQPIVTLSTCEAEYVAATSCVCHAIWLRNLLKELNLPQEEPTKIFVDNRS 1279

Query: 1918 AIAMAKNPVFHNRTKHIKIKYHFIREAEANSEIELEHCKTDEQLADIFTKALP 1760
            AIA+AKNPVFH+R+KHI  +YH+IRE     +++LE+ KT++Q+ADIFTK  P
Sbjct: 1280 AIALAKNPVFHDRSKHIDTRYHYIRECVTKMDVQLEYVKTNDQVADIFTKKYP 1332


>gb|KYP66220.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1331

 Score =  970 bits (2507), Expect = 0.0
 Identities = 506/1113 (45%), Positives = 709/1113 (63%), Gaps = 41/1113 (3%)
 Frame = -3

Query: 5519 NYDFWSIKMKTYFCAQDLWDIVNNGYTIPNDISTLSAVQKKEFKENQQKDXXXXXXXXXX 5340
            NYD WS++M     A D+W++V  G+T P ++ +LS  QK   ++++++D          
Sbjct: 6    NYDNWSLRMVALLGAHDVWEVVEKGHTEPENVESLSQAQKDSLRDSRKRDKKALCLIYQG 65

Query: 5339 XADEYFPRIMGAKTAKEAWDKLQEEFQGNEKVRATRLQTLRRKFENLKMLDSETAKDYYS 5160
              ++ F +I G KTAKEAW+KL+  ++G ++V+  RLQTLR +FE L M + E   DY+S
Sbjct: 66   LDEDTFEKISGVKTAKEAWEKLKISYKGADQVKKVRLQTLRGEFEALHMKEGELVSDYFS 125

Query: 5159 RVNEVVNQLRAYGENFPESKIVSKILITCTEKYDPIIAAIEESKDIEKLTATELMGSLEA 4980
            RV  V N L+  GE   + +I+ KIL +   K++ I+   EE+KD+E ++  +L+GSL+A
Sbjct: 126  RVLTVTNNLKRNGEKLDDVRIMEKILRSLDPKFEHIVTITEETKDLEAMSIEQLLGSLQA 185

Query: 4979 HEKRLERRYEKDIDNAFQSKLSMQSQKNKKN------------GRKYNEG---KPTDNND 4845
            +E++ +++ E+ ++  F++ +  + ++N  N            GR Y  G   +P +NN 
Sbjct: 186  YEEKKKKK-EEIVEQVFKAHVDSRKEENAHNQSRRSYSQEQGRGRAYGHGQGRRPNNNNQ 244

Query: 4844 KFPPCGICKRKSHLEKDCWFKGKPQCQNCKKFGHVEKSCRL----KQRHQANFSENTEFE 4677
            +       + + +     + K + +C NC KFGH    CR     K   +AN++E    E
Sbjct: 245  RGESSNRGRGRGN-PNSRYDKSRIKCYNCNKFGHYASECRAPNKNKVEEKANYAEERCQE 303

Query: 4676 NNLFYVCQAASEENKDT-WYLDSGCSNHMTKNESIFCQLDK-ISTKIKIGNGDYMEATGK 4503
            +    +     ++ +D  WYLDSG SNHM    S+F +LD+ +   +  G+   +   GK
Sbjct: 304  DGTLLLAYKGQDKGEDNQWYLDSGASNHMCGKRSMFVELDESVKGNVAFGDESKVAVEGK 363

Query: 4502 GTIAIDTKKGK-RYINEVLLVPTIDQNLLSVGQMMEKGYSLYFEGDSCTIYDKKDKSLVI 4326
            G + I  K G+ ++I+ +  VP++  N+LS+GQ++EKGY +  + ++ +I D  + S  I
Sbjct: 364  GNVLIQLKNGEHQFISNIYYVPSMKSNILSLGQLLEKGYDIQLKNNNLSIRD--NTSRFI 421

Query: 4325 TKVKMRENRCFPIQWRYANDAAMTAQVND-TWLWHRRFGHFNLQGLKILNQKNMMRDLPT 4149
            TKV M  NR F +  +      +     D +WLWH RFGH N +GL +L++K M+R LP 
Sbjct: 422  TKVPMMRNRMFVLNIQSDGPQCLKMCYKDQSWLWHLRFGHLNFKGLDLLSKKAMVRGLPC 481

Query: 4148 IKELDGVCEGCMLGKQHRQPFPSGKAWRAKKPLELVHTDICGPMRTPSNEQNRYFILFID 3969
            I   + VCEGC+LGKQ R  FP     RA+KPLEL+HTD+CGP++  S  ++ YF+LFID
Sbjct: 482  ITHPNQVCEGCLLGKQFRLSFPKESDSRAQKPLELIHTDVCGPIKPRSLGKSNYFLLFID 541

Query: 3968 DYTRMTWVYFLREKSQVFDIFKKFKAYVEKQSGHKIKTIRSDRGKEYTSTQFTKFCEDEG 3789
            D++R TWVYFL+EKS+VF+ FKKFKA+VEK+SG  IK +RSDRG E+TS +F K+CED G
Sbjct: 542  DFSRKTWVYFLKEKSEVFENFKKFKAHVEKESGLLIKALRSDRGGEFTSKEFQKYCEDNG 601

Query: 3788 VEHQLTVGYAPEQNGVSERKNRTVMETARSMLMEKGLPKSFWAEAVSTAVYLLNRCPTKA 3609
            +  QLTV  +P+QNGV+ERKNRT++E ARSML  K LPK FWAEAV+ AVYL NR PT++
Sbjct: 602  IRRQLTVPRSPQQNGVAERKNRTILEMARSMLKSKKLPKEFWAEAVACAVYLTNRSPTRS 661

Query: 3608 VQDKTPVEAWSRRKPSAKHLRVFGCICYVHIPQQKRGKLDEKTEKCIFLGYSTQSKGYRV 3429
            V  KTP EAWS RKP   HLRVFG I +VH+P +KR KLD+K+EK IF+GY   SKGY++
Sbjct: 662  VSGKTPQEAWSGRKPGISHLRVFGSIAHVHVPDEKRSKLDDKSEKYIFIGYDANSKGYKL 721

Query: 3428 YSLSTRKLIISRDVMFDEDAAYNWETN--------QVEKRSINLPKLTHEQEETSNDPPE 3273
            Y+  +RK IISR+V+FDE+  ++W TN         VE+  +   +   + +ET   PP 
Sbjct: 722  YNPDSRKTIISRNVVFDEEGEWDWSTNCEDHTFFPCVEEDDV---EQQQQPQETPTTPPT 778

Query: 3272 TPERAXXXXXXXXXXXXXXXTRSLREIYQT----------CNLTIMEPDSYEAAAKQEVW 3123
            +P                   RSL+EIY+           C     EP +++ A  ++ W
Sbjct: 779  SPNTT--LQDYESSSERMPRFRSLQEIYEATENLDNVTLFCLFADCEPMNFQEAIGKKSW 836

Query: 3122 VKAXXXXXXXXXKNETWELTDLPQDKEAIGVKWVYKTKLNPDGSVQKYKARLVAKGYAQQ 2943
              A         KN+TWEL  LP++  AIGVKWVYK K +  G VQ+YKARLVAKGY+Q+
Sbjct: 837  RNAMDEEIEAIKKNDTWELVSLPKEHTAIGVKWVYKAKKDSKGEVQRYKARLVAKGYSQR 896

Query: 2942 YGIDYSETFAPVARLDTIRALIALAAQKQWKIYQLDVKFAFLNGYLEEEIYVEQPQGFVV 2763
             GIDY E FAPVARL+T+R +I+LAAQ  WKI+Q+DVK AFLNG LEEE+Y+EQPQG+ V
Sbjct: 897  AGIDYDEVFAPVARLETVRLIISLAAQNNWKIHQMDVKSAFLNGVLEEEVYIEQPQGYEV 956

Query: 2762 QGKEDKVLRLKKALYGLKQAPRAWYSRIDDYFTELGFRRSQSEPTLYIKTQGTNNTLIVS 2583
            +G+EDKVLRLKKALYGLKQAPRAW  RID YF E  F +   E  LYIK QG  + LIV 
Sbjct: 957  KGEEDKVLRLKKALYGLKQAPRAWNVRIDKYFKEANFIKCPYEHALYIKAQG-KDILIVC 1015

Query: 2582 LYVDDLIFTGNNENMIMEFKEDMMKTFEMTDLGLMHYFLGIEIHQRKDGIFISQKKYAES 2403
            LYVDDLIFTGNN +M  EFK+DM K FEMTD+GLM Y+LGIE+ Q  +GIFI+Q+ YA+ 
Sbjct: 1016 LYVDDLIFTGNNPSMFEEFKKDMTKEFEMTDMGLMAYYLGIEVKQGNEGIFITQESYAKD 1075

Query: 2402 LLKRFKMEGCKTVATPLDNNKALKKEDGSPKAD 2304
            LLK+FK++    V TP++    L K++   K D
Sbjct: 1076 LLKKFKLDDANPVGTPMECGIKLSKDEEGEKVD 1108



 Score =  202 bits (514), Expect = 1e-48
 Identities = 91/185 (49%), Positives = 133/185 (71%)
 Frame = -1

Query: 2275 PSQIHYGAAKRVLRYLEGTKNYGIWYEPVTNSKLIGYTDSDWAGSIDDMKSTSGYAFTLG 2096
            P+  H   AKR+LRY++GT ++G++Y    + KL+GY+DSDW+G +DD KSTSG+ F +G
Sbjct: 1143 PTTTHLKTAKRILRYIKGTTSFGLYYSNSNDYKLVGYSDSDWSGDMDDRKSTSGFVFYMG 1202

Query: 2095 SEIFSWASKKQATVAQSSAEAEYIAAAMTTSQAIWLKRILEDMGEVQEKATKIFCDSKSA 1916
               F+W SKKQ  V  S+ EAEY+AA      AIWL+ +L+++   Q + TKI+ D+KS 
Sbjct: 1203 DTAFTWMSKKQPIVTLSTCEAEYVAATSCVCHAIWLRNLLKELSLPQVEPTKIYVDNKST 1262

Query: 1915 IAMAKNPVFHNRTKHIKIKYHFIREAEANSEIELEHCKTDEQLADIFTKALPRGKFEILR 1736
            IA+AKNPVFH+R+KHI  +YH+IRE  +N ++++E+ KT +Q+ADIFTK L +  F  LR
Sbjct: 1263 IALAKNPVFHDRSKHIHTRYHYIRECISNKDVQMEYVKTHDQVADIFTKPLKKEVFMKLR 1322

Query: 1735 DMIGV 1721
             ++GV
Sbjct: 1323 SLLGV 1327


>gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thaliana]
          Length = 1352

 Score =  967 bits (2501), Expect = 0.0
 Identities = 507/1116 (45%), Positives = 719/1116 (64%), Gaps = 42/1116 (3%)
 Frame = -3

Query: 5540 IPVFRGENYDFWSIKMKTYFCAQDLWDIVNNGYTIPNDISTLSAVQKKEFKENQQKDXXX 5361
            +PV    NYD WS++MK    A D+W+IV  G+  P +  +LS  QK   ++++++D   
Sbjct: 10   VPVLTKSNYDNWSLRMKAILGAHDVWEIVEKGFIEPENEGSLSQTQKDGLRDSRKRDKKA 69

Query: 5360 XXXXXXXXADEYFPRIMGAKTAKEAWDKLQEEFQGNEKVRATRLQTLRRKFENLKMLDSE 5181
                     ++ F +++ A +AKEAW+KL+  ++G ++V+  RLQTLR +FE L+M + E
Sbjct: 70   LCLIYQGLDEDTFEKVVEATSAKEAWEKLRTSYKGADQVKKVRLQTLRGEFEALQMKEGE 129

Query: 5180 TAKDYYSRVNEVVNQLRAYGENFPESKIVSKILITCTEKYDPIIAAIEESKDIEKLTATE 5001
               DY+SRV  V N L+  GE   + +I+ K+L +   K++ I+  IEE+KD+E +T  +
Sbjct: 130  LVSDYFSRVLTVTNNLKRNGEKLDDVRIMEKVLRSLDLKFEHIVTVIEETKDLEAMTIEQ 189

Query: 5000 LMGSLEAHEKRLERR---YEKDIDNAFQSKLSMQSQKNKKNGRKYNEGK----------- 4863
            L+GSL+A+E++ +++    E+ ++     + + QS + +  G+    G+           
Sbjct: 190  LLGSLQAYEEKKKKKEDIVEQVLNMQITKEENGQSYQRRGGGQVRGRGRGGYGNGRGWRP 249

Query: 4862 -PTDNNDKFPPCGICKRKSHLEKDCWFKGKPQCQNCKKFGHVEKSCRL----KQRHQANF 4698
               + N +       + K H  K  + K   +C NC KFGH    C+     K   +AN+
Sbjct: 250  HEDNTNQRGENSSRGRGKGH-PKSRYDKSSVKCYNCGKFGHYASECKAPSNKKFEEKANY 308

Query: 4697 SENTEFENNLFYVCQAASEENKDT--WYLDSGCSNHMTKNESIFCQLDK-ISTKIKIGNG 4527
             E    E ++  +     +E K+   WYLDSG SNHM   +S+F +LD+ +   + +G+ 
Sbjct: 309  VEEKIQEEDMLLMASYKKDEQKENHKWYLDSGASNHMCGRKSMFAELDESVRGNVALGDE 368

Query: 4526 DYMEATGKGTIAIDTKKGK-RYINEVLLVPTIDQNLLSVGQMMEKGYSLYFEGDSCTIYD 4350
              ME  GKG I I  K G  ++I+ V  +P++  N+LS+GQ++EKGY +  + ++ +I D
Sbjct: 369  SKMEVKGKGNILIRLKNGDHQFISNVYYIPSMKTNILSLGQLLEKGYDIRLKDNNLSIRD 428

Query: 4349 KKDKSLVITKVKMRENRCFPIQWRYANDAAMTAQV---NDTWLWHRRFGHFNLQGLKILN 4179
            ++  S +ITKV M +NR F +  R  ND A   ++    ++WLWH RFGH N  GL++L+
Sbjct: 429  QE--SNLITKVPMSKNRMFVLNIR--NDIAQCLKMCYKEESWLWHLRFGHLNFGGLELLS 484

Query: 4178 QKNMMRDLPTIKELDGVCEGCMLGKQHRQPFPSGKAWRAKKPLELVHTDICGPMRTPSNE 3999
            +K M+R LP I   + VCEGC+LGKQ +  FP   + RA+KPLEL+HTD+CGP++  S  
Sbjct: 485  RKEMVRGLPCINHPNQVCEGCLLGKQFKMSFPKESSSRAQKPLELIHTDVCGPIKPKSLG 544

Query: 3998 QNRYFILFIDDYTRMTWVYFLREKSQVFDIFKKFKAYVEKQSGHKIKTIRSDRGKEYTST 3819
            ++ YF+LFIDD++R TWVYFL+EKS+VF+IFKKFKA+VEK+SG  IKT+RSDRG E+TS 
Sbjct: 545  KSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKTMRSDRGGEFTSK 604

Query: 3818 QFTKFCEDEGVEHQLTVGYAPEQNGVSERKNRTVMETARSMLMEKGLPKSFWAEAVSTAV 3639
            +F K+CED G+  QLTV  +P+QNGV ERKNRT++E ARSML  K LPK  WAEAV+ AV
Sbjct: 605  EFLKYCEDNGIRRQLTVPRSPQQNGVVERKNRTILEMARSMLKSKRLPKELWAEAVACAV 664

Query: 3638 YLLNRCPTKAVQDKTPVEAWSRRKPSAKHLRVFGCICYVHIPQQKRGKLDEKTEKCIFLG 3459
            YLLNR PTK+V  KTP EAWS RKP   HLRVFG I + H+P +KR KLD+K+EK IF+G
Sbjct: 665  YLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRSKLDDKSEKYIFIG 724

Query: 3458 YSTQSKGYRVYSLSTRKLIISRDVMFDEDAAYNWETNQVEKRSI-----NLPKLTHEQEE 3294
            Y   SKGY++Y+  T+K IISR+++FDE+  ++W +N+ +         + P+ T E E 
Sbjct: 725  YDNNSKGYKLYNPDTKKTIISRNIVFDEEGEWDWNSNEEDYNFFPHFEEDEPEPTRE-EP 783

Query: 3293 TSNDPPETPERAXXXXXXXXXXXXXXXTRSLREIYQTC----NLTIM------EPDSYEA 3144
             S +P   P                   RS++E+Y+      NLT+       EP  ++ 
Sbjct: 784  PSEEPTTPPTSPTSSQIEESSSERTPRFRSIQELYEVTENQENLTLFCLFAECEPMDFQK 843

Query: 3143 AAKQEVWVKAXXXXXXXXXKNETWELTDLPQDKEAIGVKWVYKTKLNPDGSVQKYKARLV 2964
            A +++ W  A         KN+TWELT LP   +AIGVKWVYK K N  G V++YKARLV
Sbjct: 844  AIEKKTWRNAMDEEIKSIQKNDTWELTSLPNGHKAIGVKWVYKAKKNSKGEVERYKARLV 903

Query: 2963 AKGYAQQYGIDYSETFAPVARLDTIRALIALAAQKQWKIYQLDVKFAFLNGYLEEEIYVE 2784
            AKGY+Q+ GIDY E FAPVARL+T+R +I+LAAQ +WKI+Q+DVK AFLNG LEEE+Y+E
Sbjct: 904  AKGYSQRVGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIE 963

Query: 2783 QPQGFVVQGKEDKVLRLKKALYGLKQAPRAWYSRIDDYFTELGFRRSQSEPTLYIKTQGT 2604
            QPQG++V+G+EDKVLRLKK LYGLKQAPRAW +RID YF E  F +   E  LYIK Q  
Sbjct: 964  QPQGYIVKGEEDKVLRLKKVLYGLKQAPRAWNTRIDKYFKEKDFIKCPYEHALYIKIQ-K 1022

Query: 2603 NNTLIVSLYVDDLIFTGNNENMIMEFKEDMMKTFEMTDLGLMHYFLGIEIHQRKDGIFIS 2424
             + LI  LYVDDLIFTGNN ++  EFK++M K FEMTD+GLM Y+LGIE+ Q  +GIFI+
Sbjct: 1023 EDILIACLYVDDLIFTGNNPSIFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIFIT 1082

Query: 2423 QKKYAESLLKRFKMEGCKTVATPLD-NNKALKKEDG 2319
            Q+ YA+ +LK+FKM+    V TP++   K  KKE+G
Sbjct: 1083 QEGYAKEVLKKFKMDDSNPVCTPMECGIKLSKKEEG 1118



 Score =  211 bits (538), Expect = 2e-51
 Identities = 95/188 (50%), Positives = 136/188 (72%)
 Frame = -1

Query: 2278 NPSQIHYGAAKRVLRYLEGTKNYGIWYEPVTNSKLIGYTDSDWAGSIDDMKSTSGYAFTL 2099
            +P+  H+ AAKR+LRY++GT N+G+ Y   ++ KL+GY+DSDW G +DD KSTSG+ F +
Sbjct: 1156 HPTTTHFKAAKRILRYIKGTVNFGLHYSTTSDYKLVGYSDSDWGGDVDDRKSTSGFVFYI 1215

Query: 2098 GSEIFSWASKKQATVAQSSAEAEYIAAAMTTSQAIWLKRILEDMGEVQEKATKIFCDSKS 1919
            G   F+W SKKQ  V  S+ EAEY+AA      AIWL+ +L+++   QE+ TKIF D+KS
Sbjct: 1216 GDTAFTWMSKKQPIVTLSTCEAEYVAATSCVCHAIWLRNLLKELSLPQEEPTKIFVDNKS 1275

Query: 1918 AIAMAKNPVFHNRTKHIKIKYHFIREAEANSEIELEHCKTDEQLADIFTKALPRGKFEIL 1739
            AIA+AKNPVFH+R+KHI  +YH+IRE  +  +++LE+ KT +Q+AD FTK L R  F  +
Sbjct: 1276 AIALAKNPVFHDRSKHIDTRYHYIRECVSKKDVQLEYVKTHDQVADFFTKPLKRENFIKM 1335

Query: 1738 RDMIGVTE 1715
            R ++GV +
Sbjct: 1336 RSLLGVAK 1343


>ref|XP_007030765.1| Uncharacterized protein TCM_026511 [Theobroma cacao]
            gi|508719370|gb|EOY11267.1| Uncharacterized protein
            TCM_026511 [Theobroma cacao]
          Length = 1318

 Score =  964 bits (2492), Expect = 0.0
 Identities = 498/1116 (44%), Positives = 690/1116 (61%), Gaps = 23/1116 (2%)
 Frame = -3

Query: 5570 MADTFRSSIPIPVFRGENYDFWSIKMKTYFCAQDLWDIVNNGYTIPNDISTLSAVQKKEF 5391
            MA +  S    PVF G NY  W++KMK Y  A DLW++V  G   P   +  +  Q K++
Sbjct: 1    MASSNYSIAAPPVFNGNNYPMWAVKMKAYLKAFDLWEVVEVGGDPPARQANPTIAQMKQY 60

Query: 5390 KENQQKDXXXXXXXXXXXADEYFPRIMGAKTAKEAWDKLQEEFQGNEKVRATRLQTLRRK 5211
             E   K             D  F RIM  ++AKEAWDK++EEF G+++ R  ++  L R+
Sbjct: 61   NEEVAKRFKALSCIHSAVTDAIFVRIMACESAKEAWDKIKEEFHGSDRTRQIQILNLLRE 120

Query: 5210 FENLKMLDSETAKDYYSRVNEVVNQLRAYGENFPESKIVSKILITCTEKYDPIIAAIEES 5031
            FE LKM D ET KDY  +V  VVNQLR +GEN  E ++V+K L++  EK++  I+++E+S
Sbjct: 121  FEVLKMKDEETMKDYSDKVLRVVNQLRLFGENITERRVVNKFLVSLPEKFESKISSLEDS 180

Query: 5030 KDIEKLTATELMGSLEAHEKRLERRYE---------KDIDNAFQSKLSMQSQKNKKNGRK 4878
            KD+  ++ +EL+ +L+A E+R   R E         + +D    S    +S+  KK+  K
Sbjct: 181  KDLTTMSVSELINALQAQEQRRALRQEDHVEAALAARRVDKRTSSGSHKKSEYEKKDKDK 240

Query: 4877 YNEGKPTDNNDKFPPCGICKRKSHLEKDCWFKGKPQCQNCKKFGHVEKSCRLKQRH---- 4710
              E K      +FPPC  CK+K+H+E+ CW++   +C+ C + GHVEK C+ K+      
Sbjct: 241  RYEEKKQGKKWQFPPCSYCKKKNHIERYCWYRPHVKCRACNQKGHVEKVCKNKENRVEEK 300

Query: 4709 QANFSENTEFENNLFYVCQAASEENKDTWYLDSGCSNHMTKNESIFCQLDKI-STKIKIG 4533
             A   +  + E  LF V ++   +    W +DS CS H+T     F  L+K   + ++IG
Sbjct: 301  AAIVEQKEDAEETLFMVIESNDSKKDSIWLIDSACSTHITGKIKNFLDLNKAYKSTVEIG 360

Query: 4532 NGDYMEATGKGTIAIDTKKGKRYINEVLLVPTIDQNLLSVGQMMEKGYSLYFEGDSCTIY 4353
            +G+ ++  G+GT+ I TKKG + I  V   P + QNLLSVGQ++++  SL F+ + CTI+
Sbjct: 361  DGNLLKIAGRGTVGITTKKGMKTIANVCFAPEVTQNLLSVGQLVKEKNSLLFKDELCTIF 420

Query: 4352 DKKDKSLVITKVKMRENRCFPIQWRYANDAAMTAQVNDTWLWHRRFGHFNLQGLKILNQK 4173
            D   +   I  VKMR N+CFP+    A   A     N+  LWHRR GH N Q +K +   
Sbjct: 421  DPSGRE--IATVKMR-NKCFPLDLNEAGHMAYKCVSNEARLWHRRLGHINYQFIKNMGSL 477

Query: 4172 NMMRDLPTIKELDGVCEGCMLGKQHRQPFPSGKAWRAKKPLELVHTDICGPMRTPSNEQN 3993
            N++ D+P I E++  CE C+ GKQ R PFP     R    L+L+HTDICGP+ T S   N
Sbjct: 478  NLVNDMPIITEVEKTCEVCLQGKQSRHPFPKQSQTRTANRLQLIHTDICGPIGTLSLNGN 537

Query: 3992 RYFILFIDDYTRMTWVYFLREKSQVFDIFKKFKAYVEKQSGHKIKTIRSDRGKEYTSTQF 3813
            +YFILFIDD++R  W++FL++KS+    F KFK  VEKQ+  KIK +RSD G EYTS +F
Sbjct: 538  KYFILFIDDFSRFCWIFFLKQKSEAIQYFMKFKVLVEKQTDQKIKALRSDNGSEYTSNEF 597

Query: 3812 TKFCEDEGVEHQLTVGYAPEQNGVSERKNRTVMETARSMLMEKGLPKSFWAEAVSTAVYL 3633
                  EG++  LTV Y+P+QNGVSERKNRT+ME  R +L E+ +PK FWAEA + AV L
Sbjct: 598  KALLTQEGIKQFLTVPYSPQQNGVSERKNRTIMEMIRCLLFEQQMPKYFWAEAANFAVTL 657

Query: 3632 LNRCPTKAVQDKTPVEAWSRRKPSAKHLRVFGCICYVHIPQQKRGKLDEKTEKCIFLGYS 3453
             N  PT A+   TP E W   KPS  +++VFGCI Y  +PQQKR KLD KT+  I LGYS
Sbjct: 658  QNLIPTTALNSMTPFEVWHGYKPSISNVKVFGCIAYAQVPQQKRTKLDSKTQISINLGYS 717

Query: 3452 TQSKGYRVYSLSTRKLIISRDVMFDEDAAYNWETNQVEKR-----SINL----PKLTHEQ 3300
            + SKGYR++++ T+K+ ISRDV+F+ED  +NW  N++ +      ++NL     +  HE 
Sbjct: 718  SVSKGYRLFNVETKKVFISRDVVFNEDIHWNWMKNEIAENNNDNVAVNLDVFEEEAGHEL 777

Query: 3299 EETSNDPPETPERAXXXXXXXXXXXXXXXTRSLREIYQTCNLTIMEPDSYEAAAKQEVWV 3120
            ++  +D P                      RSL++IY+ CN+ I +P SY  AA  E W 
Sbjct: 778  DDNIDDMP------------------VRGIRSLQDIYEQCNVAITDPCSYIEAASDEQWK 819

Query: 3119 KAXXXXXXXXXKNETWELTDLPQDKEAIGVKWVYKTKLNPDGSVQKYKARLVAKGYAQQY 2940
             A         +N+TW L D P+ +  I VKW+++TKLN DGS+ K KARLV +G++Q +
Sbjct: 820  LAMEAEMTMIKRNQTWILVDRPKHQRVISVKWIFRTKLNSDGSINKLKARLVVRGFSQVH 879

Query: 2939 GIDYSETFAPVARLDTIRALIALAAQKQWKIYQLDVKFAFLNGYLEEEIYVEQPQGFVVQ 2760
            G+D+ ETFAPVAR DTIR L+ALA +++W+I+ +DVK AFLNG + E+IYVEQP+GFV +
Sbjct: 880  GVDFFETFAPVARHDTIRLLVALAGREKWRIWHMDVKSAFLNGTISEDIYVEQPEGFVEK 939

Query: 2759 GKEDKVLRLKKALYGLKQAPRAWYSRIDDYFTELGFRRSQSEPTLYIKTQGTNNTLIVSL 2580
            GKEDKV +L KALYGLKQAPRAWY +ID Y     F  S+SEPTLY+K+      LIVS+
Sbjct: 940  GKEDKVCKLIKALYGLKQAPRAWYKKIDAYLRSNKFFCSESEPTLYVKSSLGKIQLIVSV 999

Query: 2579 YVDDLIFTGNNENMIMEFKEDMMKTFEMTDLGLMHYFLGIEIHQRKDGIFISQKKYAESL 2400
            YVDDL+ TG N++ +  F+  M   F+M+DLG M YFLG+EI QR D I + QKKYA  L
Sbjct: 1000 YVDDLLITGPNKSDLNSFRNKMKSEFDMSDLGEMSYFLGLEIQQRSDFICLHQKKYAGEL 1059

Query: 2399 LKRFKMEGCKTVATPLDNNKALKKEDGSPKADNSQF 2292
            LKRFKMEGCK V+TPL     L K+DGS   D +Q+
Sbjct: 1060 LKRFKMEGCKPVSTPLTTGTKLCKDDGSTLVDVTQY 1095



 Score =  232 bits (591), Expect = 7e-58
 Identities = 112/193 (58%), Positives = 148/193 (76%)
 Frame = -1

Query: 2278 NPSQIHYGAAKRVLRYLEGTKNYGIWYEPVTNSKLIGYTDSDWAGSIDDMKSTSGYAFTL 2099
            +P++ H  AAKRVLRY++GT NYG+ Y  V N +L GY+DSDWAGS DD KSTSGY F+ 
Sbjct: 1125 SPTKTHLTAAKRVLRYVKGTLNYGLLYGQVENKELEGYSDSDWAGSYDDSKSTSGYCFSF 1184

Query: 2098 GSEIFSWASKKQATVAQSSAEAEYIAAAMTTSQAIWLKRILEDMGEVQEKATKIFCDSKS 1919
            GS +FSW SKKQ  VAQSSAEAEY+AAA  T+QA+WL+++L D+   Q   T ++ D++S
Sbjct: 1185 GSAMFSWNSKKQDIVAQSSAEAEYVAAASATNQALWLRKVLLDLKFEQINPTVLWLDNQS 1244

Query: 1918 AIAMAKNPVFHNRTKHIKIKYHFIREAEANSEIELEHCKTDEQLADIFTKALPRGKFEIL 1739
            AIA+AKNP+ H+RTKHI+IK+H IREA  N+E+ + +C TD+Q+ADIFTK L R KFE+L
Sbjct: 1245 AIALAKNPINHSRTKHIRIKFHVIREAVTNNEVVVNYCGTDDQIADIFTKGLCREKFELL 1304

Query: 1738 RDMIGVTEICTKE 1700
            R  +G+  +  KE
Sbjct: 1305 RSKLGMGNVDFKE 1317


>emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]
          Length = 1352

 Score =  964 bits (2491), Expect = 0.0
 Identities = 505/1116 (45%), Positives = 719/1116 (64%), Gaps = 42/1116 (3%)
 Frame = -3

Query: 5540 IPVFRGENYDFWSIKMKTYFCAQDLWDIVNNGYTIPNDISTLSAVQKKEFKENQQKDXXX 5361
            +PV    NYD WS++MK    A D+W+IV  G+  P +  +LS  QK   ++++++D   
Sbjct: 10   VPVLTKSNYDNWSLRMKAILGAHDVWEIVEKGFIEPENEGSLSQTQKDGLRDSRKRDKKA 69

Query: 5360 XXXXXXXXADEYFPRIMGAKTAKEAWDKLQEEFQGNEKVRATRLQTLRRKFENLKMLDSE 5181
                     ++ F +++ A +AKEAW+KL+  ++G ++V+  RLQTLR +FE L+M + E
Sbjct: 70   LCLIYQGLDEDTFEKVVEATSAKEAWEKLRTSYKGADQVKKVRLQTLRGEFEALQMKEGE 129

Query: 5180 TAKDYYSRVNEVVNQLRAYGENFPESKIVSKILITCTEKYDPIIAAIEESKDIEKLTATE 5001
               DY+SRV  V N L+  GE   + +I+ K+L +   K++ I+  IEE+KD+E +T  +
Sbjct: 130  LVSDYFSRVLTVTNNLKRNGEKLDDVRIMEKVLRSLDLKFEHIVTVIEETKDLEAMTIEQ 189

Query: 5000 LMGSLEAHEKRLERRY---EKDIDNAFQSKLSMQSQKNKKNGRKYNEGK----------- 4863
            L+GSL+A+E++ +++    E+ ++     + + QS + +  G+    G+           
Sbjct: 190  LLGSLQAYEEKKKKKEDIAEQVLNMQITKEENGQSYQRRGGGQVRGRGRGGYGNGRGWRP 249

Query: 4862 -PTDNNDKFPPCGICKRKSHLEKDCWFKGKPQCQNCKKFGHVEKSCRL----KQRHQANF 4698
               + N +       + K H  K  + K   +C NC KFGH    C+     K   +A++
Sbjct: 250  HEDNTNQRGENSSRGRGKGH-PKSRYDKSSVKCYNCGKFGHYASECKAPSNKKFEEKAHY 308

Query: 4697 SENTEFENNLFYVCQAASEENKDT--WYLDSGCSNHMTKNESIFCQLDK-ISTKIKIGNG 4527
             E    E ++  +     +E K+   WYLDSG SNHM   +S+F +LD+ +   + +G+ 
Sbjct: 309  VEEKIQEEDMLLMASYKKDEQKENHKWYLDSGASNHMCGRKSMFAELDESVRGNVALGDE 368

Query: 4526 DYMEATGKGTIAIDTKKGK-RYINEVLLVPTIDQNLLSVGQMMEKGYSLYFEGDSCTIYD 4350
              ME  GKG I I  K G  ++I+ V  +P++  N+LS+GQ++EKGY +  + ++ +I D
Sbjct: 369  SKMEVKGKGNILIRLKNGDHQFISNVYYIPSMKTNILSLGQLLEKGYDIRLKDNNLSIRD 428

Query: 4349 KKDKSLVITKVKMRENRCFPIQWRYANDAAMTAQV---NDTWLWHRRFGHFNLQGLKILN 4179
            ++  S +ITKV M +NR F +  R  ND A   ++    ++WLWH RFGH N  GL++L+
Sbjct: 429  QE--SNLITKVPMSKNRMFVLNIR--NDIAQCLKMCYKEESWLWHLRFGHLNFGGLELLS 484

Query: 4178 QKNMMRDLPTIKELDGVCEGCMLGKQHRQPFPSGKAWRAKKPLELVHTDICGPMRTPSNE 3999
            +K M+R LP I   + VCEGC+LGKQ +  FP   + RA+KPLEL+HTD+CGP++  S  
Sbjct: 485  RKEMVRGLPCINHPNQVCEGCLLGKQFKMSFPKESSSRAQKPLELIHTDVCGPIKPKSLG 544

Query: 3998 QNRYFILFIDDYTRMTWVYFLREKSQVFDIFKKFKAYVEKQSGHKIKTIRSDRGKEYTST 3819
            ++ YF+LFIDD++R TWVYFL+EKS+VF+IFKKFKA+VEK+SG  IKT+RSDRG E+TS 
Sbjct: 545  KSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKTMRSDRGGEFTSK 604

Query: 3818 QFTKFCEDEGVEHQLTVGYAPEQNGVSERKNRTVMETARSMLMEKGLPKSFWAEAVSTAV 3639
            +F K+CED G+  QLTV  +P+QNGV ERKNRT++E ARSML  K LPK  WAEAV+ AV
Sbjct: 605  EFLKYCEDNGIRRQLTVPRSPQQNGVVERKNRTILEMARSMLKSKRLPKELWAEAVACAV 664

Query: 3638 YLLNRCPTKAVQDKTPVEAWSRRKPSAKHLRVFGCICYVHIPQQKRGKLDEKTEKCIFLG 3459
            YLLNR PTK+V  KTP EAWS RKP   HLRVFG I + H+P +KR KLD+K+EK IF+G
Sbjct: 665  YLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRSKLDDKSEKYIFIG 724

Query: 3458 YSTQSKGYRVYSLSTRKLIISRDVMFDEDAAYNWETNQVEKRSI-----NLPKLTHEQEE 3294
            Y   SKGY++Y+  T+K IISR+++FDE+  ++W +N+ +         + P+ T E E 
Sbjct: 725  YDNNSKGYKLYNPDTKKTIISRNIVFDEEGEWDWNSNEEDYNFFPHFEEDEPEPTRE-EP 783

Query: 3293 TSNDPPETPERAXXXXXXXXXXXXXXXTRSLREIYQTC----NLTIM------EPDSYEA 3144
             S +P   P                   RS++E+Y+      NLT+       EP  ++ 
Sbjct: 784  PSEEPTTPPTSPTSSQIEESSSERTPRFRSIQELYEVTENQENLTLFCLFAECEPMDFQK 843

Query: 3143 AAKQEVWVKAXXXXXXXXXKNETWELTDLPQDKEAIGVKWVYKTKLNPDGSVQKYKARLV 2964
            A +++ W  A         KN+TWELT LP   +AIGVKWVYK K N  G V++YKARLV
Sbjct: 844  AIEKKTWRNAMDEEIKSIQKNDTWELTSLPNGHKAIGVKWVYKAKKNSKGEVERYKARLV 903

Query: 2963 AKGYAQQYGIDYSETFAPVARLDTIRALIALAAQKQWKIYQLDVKFAFLNGYLEEEIYVE 2784
            AKGY+Q+ GIDY E FAPVARL+T+R +I+LAAQ +WKI+Q+DVK AFLNG LEEE+Y+E
Sbjct: 904  AKGYSQRVGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIE 963

Query: 2783 QPQGFVVQGKEDKVLRLKKALYGLKQAPRAWYSRIDDYFTELGFRRSQSEPTLYIKTQGT 2604
            QPQG++V+G+EDKVLRLKK LYGLKQAPRAW +RID YF E  F +   E  LYIK Q  
Sbjct: 964  QPQGYIVKGEEDKVLRLKKVLYGLKQAPRAWNTRIDKYFKEKDFIKCPYEHALYIKIQ-K 1022

Query: 2603 NNTLIVSLYVDDLIFTGNNENMIMEFKEDMMKTFEMTDLGLMHYFLGIEIHQRKDGIFIS 2424
             + LI  LYVDDLIFTGNN ++  EFK++M K FEMTD+GLM Y+LGIE+ Q  +GIFI+
Sbjct: 1023 EDILIACLYVDDLIFTGNNPSIFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIFIT 1082

Query: 2423 QKKYAESLLKRFKMEGCKTVATPLD-NNKALKKEDG 2319
            Q+ YA+ +LK+FK++    V TP++   K  KKE+G
Sbjct: 1083 QEGYAKEVLKKFKIDDSNPVCTPMECGIKLSKKEEG 1118



 Score =  211 bits (538), Expect = 2e-51
 Identities = 95/188 (50%), Positives = 136/188 (72%)
 Frame = -1

Query: 2278 NPSQIHYGAAKRVLRYLEGTKNYGIWYEPVTNSKLIGYTDSDWAGSIDDMKSTSGYAFTL 2099
            +P+  H+ AAKR+LRY++GT N+G+ Y   ++ KL+GY+DSDW G +DD KSTSG+ F +
Sbjct: 1156 HPTTTHFKAAKRILRYIKGTVNFGLHYSTTSDYKLVGYSDSDWGGDVDDRKSTSGFVFYI 1215

Query: 2098 GSEIFSWASKKQATVAQSSAEAEYIAAAMTTSQAIWLKRILEDMGEVQEKATKIFCDSKS 1919
            G   F+W SKKQ  V  S+ EAEY+AA      AIWL+ +L+++   QE+ TKIF D+KS
Sbjct: 1216 GDTAFTWMSKKQPIVTLSTCEAEYVAATSCVCHAIWLRNLLKELSLPQEEPTKIFVDNKS 1275

Query: 1918 AIAMAKNPVFHNRTKHIKIKYHFIREAEANSEIELEHCKTDEQLADIFTKALPRGKFEIL 1739
            AIA+AKNPVFH+R+KHI  +YH+IRE  +  +++LE+ KT +Q+AD FTK L R  F  +
Sbjct: 1276 AIALAKNPVFHDRSKHIDTRYHYIRECVSKKDVQLEYVKTHDQVADFFTKPLKRENFIKM 1335

Query: 1738 RDMIGVTE 1715
            R ++GV +
Sbjct: 1336 RSLLGVAK 1343


>gb|KYP34090.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1270

 Score =  962 bits (2486), Expect = 0.0
 Identities = 506/1086 (46%), Positives = 692/1086 (63%), Gaps = 18/1086 (1%)
 Frame = -3

Query: 5495 MKTYFCAQDLWDIVNNGYTIPNDISTLSAVQKKEFKENQQKDXXXXXXXXXXXADEYFPR 5316
            M+ +  A DLW+ V   Y I       +  Q K  KE + +            +   F R
Sbjct: 1    MQNFLEALDLWEAVEEDYEIAPLPDNPTITQMKTHKEKKTRKAKAKACLFSGVSKIIFTR 60

Query: 5315 IMGAKTAKEAWDKLQEEFQGNEKVRATRLQTLRRKFENLKMLDSETAKDYYSRVNEVVNQ 5136
            IM   TAK  WD L+EE+ G+E++R+ ++  L R+FE  +M +S+T K+Y + +  + N+
Sbjct: 61   IMSHNTAKAIWDYLKEEYAGDERIRSMQVLNLMREFELQRMKESDTIKEYSNTLLGIANK 120

Query: 5135 LRAYGENFPESKIVSKILITCTEKYDPIIAAIEESKDIEKLTATELMGSLEAHEKRLERR 4956
            +R  G  F +S+IV KIL++  E+Y+  IA +E +KD+ K+T  E+M +L+A E+R   R
Sbjct: 121  VRLLGTAFSDSRIVEKILVSVPERYEASIATLENTKDLSKITLAEVMHALQAQEQRRLMR 180

Query: 4955 YEKDIDNAFQSKLSMQSQKNKKNGRKYNEGKP---------TDNNDKFPPCGICKRKSHL 4803
             E  ++ AFQ K   QS  NK+  ++ N+ +P         + N   FPPC       H 
Sbjct: 181  QEGSVEGAFQVKF--QSNGNKQKKKQNNDTRPGRLNKINNTSSNTQVFPPC------PHY 232

Query: 4802 EKDCWFKGKPQCQNCKKFGHVEKSCRLKQRH-QANFSENTEFENNLFYVCQAASEENKDT 4626
             K         C  C + GH+EK C+  Q+  +   +E+   E  LF V   A+  + ++
Sbjct: 233  VK---------CHKCGQLGHMEKICKSHQQQGEVKVAEDQSQEEQLFAVTCFAANSSTES 283

Query: 4625 WYLDSGCSNHMTKNESIFCQLDKIS-TKIKIGNGDYMEATGKGTIAIDTKKGKRYINEVL 4449
            W +DSGC+NHM+ +  +F +LDK + +K+++GNG Y+   GKGT+AI+ + G + I++VL
Sbjct: 284  WLIDSGCTNHMSYDRELFKELDKTALSKVRVGNGAYIAVKGKGTVAIEGQTGLKLISDVL 343

Query: 4448 LVPTIDQNLLSVGQMMEKGYSLYFEGDSCTIYDKKDKSLVITKVKMRENRCFPIQWRYAN 4269
             VP I+QNLLSV Q++EKGY + FE  +C I D   K   + KV+M+  + F + +    
Sbjct: 344  YVPEINQNLLSVPQLLEKGYKVLFEDKNCIIKDSAGKE--VFKVRMK-GKSFALDFMSEE 400

Query: 4268 DAAMTAQVNDTWLWHRRFGHFNLQGLKILNQKNMMRDLPTIKELDGVCEGCMLGKQHRQP 4089
             AA+  +V++T LWH+R GHF+   L  + + NM+R L  I+E    C  C  GKQ R P
Sbjct: 401  HAAVHKEVSNTILWHKRLGHFHHSALIFMKKNNMVRGLSDIEEESPTCIACQYGKQTRLP 460

Query: 4088 FPSGKAWRAKKPLELVHTDICGPMRTPSNEQNRYFILFIDDYTRMTWVYFLREKSQVFDI 3909
            FP  K WRA + L+L+HTD+ GPM TPS   +RY+I+FIDD TRM W+YF++ K +V DI
Sbjct: 461  FPQNKTWRAIQNLQLIHTDVGGPMSTPSLNGSRYYIIFIDDMTRMCWIYFMKFKYEVADI 520

Query: 3908 FKKFKAYVEKQSGHKIKTIRSDRGKEYTSTQFTKFCEDEGVEHQLTVGYAPEQNGVSERK 3729
            F KFK  VE QS  K++ IRSD G EYTS +F KFCED GVEHQLT  Y+P+QNG +ERK
Sbjct: 521  FWKFKTLVENQSKCKMQMIRSDNGTEYTSKKFNKFCEDTGVEHQLTAPYSPQQNGTAERK 580

Query: 3728 NRTVMETARSMLMEKGLPKSFWAEAVSTAVYLLNRCPTKAVQDKTPVEAWSRRKPSAKHL 3549
            NRT+ME AR +L +K LPK FWAEAV+TAV+LLNR PTKA+Q KTP EAW   KP   +L
Sbjct: 581  NRTIMEMARCLLHDKDLPKKFWAEAVNTAVFLLNRLPTKALQQKTPFEAWYGYKPELFNL 640

Query: 3548 RVFGCICYVHIPQQKRGKLDEKTEKCIFLGYSTQSKGYRVYSLSTRKLIISRDVMFDEDA 3369
            ++FGC+C+ +IP  KR KLD+K E  IF+GYS  SK YR+Y     K+I+SRDV F E  
Sbjct: 641  KIFGCLCFSYIPHIKRDKLDKKAEPGIFVGYSLISKAYRIYLPHKNKVIVSRDVKFLEFD 700

Query: 3368 AYNWETNQ-------VEKRSINLPKLTHEQEETSNDPPETPERAXXXXXXXXXXXXXXXT 3210
             ++W+ N+       ++ +  N   L  E E+  ++P                      T
Sbjct: 701  CWSWKDNKFLEQIDCLDWKGNNELGLQEENEDVDDEP-------------------VRGT 741

Query: 3209 RSLREIYQTCNLTIMEPDSYEAAAKQEVWVKAXXXXXXXXXKNETWELTDLPQDKEAIGV 3030
            R L +IYQ CN+ +MEP  YE AA  + W+ A         KN+TW+L D P  K+AIGV
Sbjct: 742  RLLSDIYQRCNVAVMEPGGYEEAATDKKWINAMEEELKMIEKNQTWQLVDRPSHKKAIGV 801

Query: 3029 KWVYKTKLNPDGSVQKYKARLVAKGYAQQYGIDYSETFAPVARLDTIRALIALAAQKQWK 2850
            KWVY+TK NPDGSV KYKARLV KGYAQ +G+D+SETFAPVARLDTIR L+ALAAQK W 
Sbjct: 802  KWVYRTKFNPDGSVNKYKARLVVKGYAQMFGVDFSETFAPVARLDTIRLLLALAAQKGWL 861

Query: 2849 IYQLDVKFAFLNGYLEEEIYVEQPQGFVVQGKEDKVLRLKKALYGLKQAPRAWYSRIDDY 2670
            I+QLDVK AFLNGYLEEEI+VEQP+GF +QG+EDKV  LKKALYGLKQAPR+WYSRID +
Sbjct: 862  IHQLDVKSAFLNGYLEEEIFVEQPEGFALQGQEDKVYLLKKALYGLKQAPRSWYSRIDAH 921

Query: 2669 FTELGFRRSQSEPTLYIKTQGTNNTLIVSLYVDDLIFTGNNENMIMEFKEDMMKTFEMTD 2490
               LGF +S SE TLYIK +   + L++SLYVDDL  TGN + MI +FKE+M   FEMTD
Sbjct: 922  LMSLGFVKSLSEYTLYIK-KVNEDILMISLYVDDLFVTGNCKEMIDKFKEEMENVFEMTD 980

Query: 2489 LGLMHYFLGIEIHQRKDGIFISQKKYAESLLKRFKMEGCKTVATPLDNNKALKKEDGSPK 2310
            LG M +FLG+++ Q+K+ IF+ Q+KYA+ +L +F M  CK+ ATP++  +   +EDG+ K
Sbjct: 981  LGKMTFFLGMQVQQKKNEIFVCQEKYAKEVLMKFNMGECKSAATPMNQKEKFCREDGAEK 1040

Query: 2309 ADNSQF 2292
             D   F
Sbjct: 1041 VDEKLF 1046



 Score =  233 bits (594), Expect = 2e-58
 Identities = 103/192 (53%), Positives = 148/192 (77%)
 Frame = -1

Query: 2272 SQIHYGAAKRVLRYLEGTKNYGIWYEPVTNSKLIGYTDSDWAGSIDDMKSTSGYAFTLGS 2093
            S+IH+ AAKR+LRY++GT +YG+W++ V +    GY+DSDWAG +DDM+STSGY F+LGS
Sbjct: 1078 SEIHFQAAKRILRYVKGTIDYGVWFKKVESLSFHGYSDSDWAGCVDDMRSTSGYCFSLGS 1137

Query: 2092 EIFSWASKKQATVAQSSAEAEYIAAAMTTSQAIWLKRILEDMGEVQEKATKIFCDSKSAI 1913
             +FSW SKKQ  +AQS+AEAEY+AAA   +Q +W+++I+ D+   QE +TKIF D+++AI
Sbjct: 1138 GVFSWCSKKQEIIAQSTAEAEYVAAAAAVNQTVWIRKIMADLHIEQEDSTKIFVDNQAAI 1197

Query: 1912 AMAKNPVFHNRTKHIKIKYHFIREAEANSEIELEHCKTDEQLADIFTKALPRGKFEILRD 1733
            ++A NPVFH +TKH KIK  F+RE +   +++L +CK+++Q+ADI TKALP+ +FE LR 
Sbjct: 1198 SIANNPVFHGKTKHFKIKLFFLREVQREGQVKLVYCKSEDQVADILTKALPKSRFEFLRQ 1257

Query: 1732 MIGVTEICTKEE 1697
             +GV     KEE
Sbjct: 1258 KLGVCSSKVKEE 1269


>gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabidopsis thaliana]
            gi|12321387|gb|AAG50765.1|AC079131_10 copia-type
            polyprotein, putative [Arabidopsis thaliana]
          Length = 1320

 Score =  962 bits (2486), Expect = 0.0
 Identities = 502/1104 (45%), Positives = 714/1104 (64%), Gaps = 30/1104 (2%)
 Frame = -3

Query: 5540 IPVFRGENYDFWSIKMKTYFCAQDLWDIVNNGYTIPNDISTLSAVQKKEFKENQQKDXXX 5361
            +PV    NYD WS++MK    A D+W+IV  G+  P +  +LS  QK   ++++++D   
Sbjct: 10   VPVLTKSNYDNWSLRMKAILGAHDVWEIVEKGFIEPENEGSLSQTQKDGLRDSRKRDKKA 69

Query: 5360 XXXXXXXXADEYFPRIMGAKTAKEAWDKLQEEFQGNEKVRATRLQTLRRKFENLKMLDSE 5181
                     ++ F +++ A +AKEAW+KL+  ++G ++V+  RLQTLR +FE L+M + E
Sbjct: 70   LCLIYQGLDEDTFEKVVEATSAKEAWEKLRTSYKGADQVKKVRLQTLRGEFEALQMKEGE 129

Query: 5180 TAKDYYSRVNEVVNQLRAYGENFPESKIVSKILITCTEKYDPIIAAIEESKDIEKLTATE 5001
               DY+SRV  V N L+  GE   + +I+ K+L +   K++ I+  IEE+KD+E +T  +
Sbjct: 130  LVSDYFSRVLTVTNNLKRNGEKLDDVRIMEKVLRSLDLKFEHIVTVIEETKDLEAMTIEQ 189

Query: 5000 LMGSLEAHEKRLERR---YEKDIDNAFQSKLSMQSQKNKKNGRKYNEGK----------- 4863
            L+GSL+A+E++ +++    E+ ++     + + QS + +  G+    G+           
Sbjct: 190  LLGSLQAYEEKKKKKEDIVEQVLNMQITKEENGQSYQRRGGGQVRGRGRGGYGNGRGWRP 249

Query: 4862 -PTDNNDKFPPCGICKRKSHLEKDCWFKGKPQCQNCKKFGHVEKSCRL----KQRHQANF 4698
               + N +       + K H  K  + K   +C NC KFGH    C+     K   +AN+
Sbjct: 250  HEDNTNQRGENSSRGRGKGH-PKSRYDKSSVKCYNCGKFGHYASECKAPSNKKFEEKANY 308

Query: 4697 SENTEFENNLFYVCQAASEENKDT--WYLDSGCSNHMTKNESIFCQLDK-ISTKIKIGNG 4527
             E    E ++  +     +E ++   WYLDSG SNHM   +S+F +LD+ +   + +G+ 
Sbjct: 309  VEEKIQEEDMLLMASYKKDEQEENHKWYLDSGASNHMCGRKSMFAELDESVRGNVALGDE 368

Query: 4526 DYMEATGKGTIAIDTKKGK-RYINEVLLVPTIDQNLLSVGQMMEKGYSLYFEGDSCTIYD 4350
              ME  GKG I I  K G  ++I+ V  +P++  N+LS+GQ++EKGY +  + ++ +I D
Sbjct: 369  SKMEVKGKGNILIRLKNGDHQFISNVYYIPSMKTNILSLGQLLEKGYDIRLKDNNLSIRD 428

Query: 4349 KKDKSLVITKVKMRENRCFPIQWRYANDAAMTAQV---NDTWLWHRRFGHFNLQGLKILN 4179
            ++  S +ITKV M +NR F +  R  ND A   ++    ++WLWH RFGH N  GL++L+
Sbjct: 429  QE--SNLITKVPMSKNRMFVLNIR--NDIAQCLKMCYKEESWLWHLRFGHLNFGGLELLS 484

Query: 4178 QKNMMRDLPTIKELDGVCEGCMLGKQHRQPFPSGKAWRAKKPLELVHTDICGPMRTPSNE 3999
            +K M+R LP I   + VCEGC+LGKQ +  FP   + RA+KPLEL+HTD+CGP++  S  
Sbjct: 485  RKEMVRGLPCINHPNQVCEGCLLGKQFKMSFPKESSSRAQKPLELIHTDVCGPIKPKSLG 544

Query: 3998 QNRYFILFIDDYTRMTWVYFLREKSQVFDIFKKFKAYVEKQSGHKIKTIRSDRGKEYTST 3819
            ++ YF+LFIDD++R TWVYFL+EKS+VF+IFKKFKA+VEK+SG  IKT+RSDRG E+TS 
Sbjct: 545  KSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKTMRSDRGGEFTSK 604

Query: 3818 QFTKFCEDEGVEHQLTVGYAPEQNGVSERKNRTVMETARSMLMEKGLPKSFWAEAVSTAV 3639
            +F K+CED G+  QLTV  +P+QNGV+ERKNRT++E ARSML  K LPK  WAEAV+ AV
Sbjct: 605  EFLKYCEDNGIRRQLTVPRSPQQNGVAERKNRTILEMARSMLKSKRLPKELWAEAVACAV 664

Query: 3638 YLLNRCPTKAVQDKTPVEAWSRRKPSAKHLRVFGCICYVHIPQQKRGKLDEKTEKCIFLG 3459
            YLLNR PTK+V  KTP EAWS RKP   HLRVFG I + H+P +KR KLD+K+EK IF+G
Sbjct: 665  YLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRSKLDDKSEKYIFIG 724

Query: 3458 YSTQSKGYRVYSLSTRKLIISRDVMFDEDAAYNWETNQVEKR---SINLPKLTHEQEETS 3288
            Y   SKGY++Y+  T+K IISR+++FDE+  ++W +N+ +          K    +EE  
Sbjct: 725  YDNNSKGYKLYNPDTKKTIISRNIVFDEEGEWDWNSNEEDYNFFPHFEEDKPEPTREEPP 784

Query: 3287 NDPPETPERAXXXXXXXXXXXXXXXTRSLREIYQTCNLTIMEPDSYEAAAKQEVWVKAXX 3108
            ++ P TP  +                 +  +I + C     EP  ++ A +++ W  A  
Sbjct: 785  SEEPTTPPTSP----------------TSSQIEEKC-----EPMDFQEAIEKKTWRNAMD 823

Query: 3107 XXXXXXXKNETWELTDLPQDKEAIGVKWVYKTKLNPDGSVQKYKARLVAKGYAQQYGIDY 2928
                   KN+TWELT LP   +AIGVKWVYK K N  G V++YKARLVAKGY+Q+ GIDY
Sbjct: 824  EEIKSIQKNDTWELTSLPNGHKAIGVKWVYKAKKNSKGEVERYKARLVAKGYSQRAGIDY 883

Query: 2927 SETFAPVARLDTIRALIALAAQKQWKIYQLDVKFAFLNGYLEEEIYVEQPQGFVVQGKED 2748
             E FAPVARL+T+R +I+LAAQ +WKI+Q+DVK AFLNG LEEE+Y+EQPQG++V+G+ED
Sbjct: 884  DEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIEQPQGYIVKGEED 943

Query: 2747 KVLRLKKALYGLKQAPRAWYSRIDDYFTELGFRRSQSEPTLYIKTQGTNNTLIVSLYVDD 2568
            KVLRLKKALYGLKQAPRAW +RID YF E  F +   E  LYIK Q   + LI  LYVDD
Sbjct: 944  KVLRLKKALYGLKQAPRAWNTRIDKYFKEKDFIKCPYEHALYIKIQ-KEDILIACLYVDD 1002

Query: 2567 LIFTGNNENMIMEFKEDMMKTFEMTDLGLMHYFLGIEIHQRKDGIFISQKKYAESLLKRF 2388
            LIFTGNN +M  EFK++M K FEMTD+GLM Y+LGIE+ Q  +GIFI+Q+ YA+ +LK+F
Sbjct: 1003 LIFTGNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIFITQEGYAKEVLKKF 1062

Query: 2387 KMEGCKTVATPLD-NNKALKKEDG 2319
            KM+    V TP++   K  KKE+G
Sbjct: 1063 KMDDSNPVCTPMECGIKLSKKEEG 1086



 Score =  213 bits (541), Expect = 6e-52
 Identities = 96/188 (51%), Positives = 137/188 (72%)
 Frame = -1

Query: 2278 NPSQIHYGAAKRVLRYLEGTKNYGIWYEPVTNSKLIGYTDSDWAGSIDDMKSTSGYAFTL 2099
            +P+  H+ AAKR+LRY++GT N+G+ Y   ++ KL+GY+DSDW G +DD KSTSG+ F +
Sbjct: 1124 HPTTTHFKAAKRILRYIKGTVNFGLHYSTTSDYKLVGYSDSDWGGDVDDRKSTSGFVFYI 1183

Query: 2098 GSEIFSWASKKQATVAQSSAEAEYIAAAMTTSQAIWLKRILEDMGEVQEKATKIFCDSKS 1919
            G   F+W SKKQ  V  S+ EAEY+AA      AIWL+ +L+++   QE+ TKIF D+KS
Sbjct: 1184 GDTAFTWMSKKQPIVTLSTCEAEYVAATSCVCHAIWLRNLLKELSLPQEEPTKIFVDNKS 1243

Query: 1918 AIAMAKNPVFHNRTKHIKIKYHFIREAEANSEIELEHCKTDEQLADIFTKALPRGKFEIL 1739
            AIA+AKNPVFH+R+KHI  +YH+IRE  +  +++LE+ KT +Q+ADIFTK L R  F  +
Sbjct: 1244 AIALAKNPVFHDRSKHIDTRYHYIRECVSKKDVQLEYVKTHDQVADIFTKPLKREDFIKM 1303

Query: 1738 RDMIGVTE 1715
            R ++GV +
Sbjct: 1304 RSLLGVAK 1311


>emb|CAN60238.1| hypothetical protein VITISV_032906 [Vitis vinifera]
          Length = 1430

 Score =  961 bits (2485), Expect = 0.0
 Identities = 500/1106 (45%), Positives = 705/1106 (63%), Gaps = 25/1106 (2%)
 Frame = -3

Query: 5534 VFRGENYDFWSIKMKTYFCAQDLWDIVNNGYTIPNDISTLSAVQKKEFKENQQKDXXXXX 5355
            V  GE Y+FWSIKMKT F +QDLWD+V NGY  P++ + L        KEN +KD     
Sbjct: 132  VVEGECYEFWSIKMKTLFKSQDLWDLVENGYPYPDEEARL--------KENTKKDSKALF 183

Query: 5354 XXXXXXADEYFPRIMGAKTAKEAWDKLQEEFQGNEKVRATRLQTLRRKFENLKMLDSETA 5175
                   +  F +I  A TAKEAW  L+  FQG+ KV   +LQ+LRR FE L M + E+ 
Sbjct: 184  FIQQAIHESIFSKIAVATTAKEAWTTLETAFQGSSKVITVKLQSLRRDFETLHMKNGESX 243

Query: 5174 KDYYSRVNEVVNQLRAYGENFPESKIVSKILITCTEKYDPIIAAIEESKDIEKLTATELM 4995
            +D+ SRV  +VNQ+R+YGE+  +  +V+K+L + T K+D ++A IEESKD+   +  ELM
Sbjct: 244  QDFLSRVAAIVNQMRSYGEDILDQTVVAKVLRSLTPKFDHVVAXIEESKDLSTYSFDELM 303

Query: 4994 GSLEAHEKRLERRYEKDIDNAFQSKLSMQSQKN-------KKNGRKYNEGKPTDNNDKFP 4836
            GSL++HE RL    +K+ +  F +K      KN       +  GR    G+      +  
Sbjct: 304  GSLQSHEVRLSXTEDKNEEKXFYTKGETSDXKNGGREXTGRGRGRGGAHGRGGRGRGRGD 363

Query: 4835 PCGICKRKSHLEKDCWFKGKPQCQNCKKFGHVEKSCRLKQRH--QANFSENTEFENNLFY 4662
              G  ++ +   ++   K    C  CK+FGHV+  C  K+R   QAN+ E  E +  LF 
Sbjct: 364  AQGDQRQSTEKSRN---KSNIXCYYCKRFGHVQAECWKKERQEKQANYVEQEEDQVKLFM 420

Query: 4661 VCQAASEENKDTWYLDSGCSNHMTKNESIFCQLDKI-STKIKIGNGDYMEATGKGTIAID 4485
                    + + W+LDSGCSNHMT  +S+F +LD+     +K+G+   ++  GKGT+A++
Sbjct: 421  AYNEEVVSSNNIWFLDSGCSNHMTGIKSLFKELDESHKLXVKLGDDXQVQVEGKGTVAVN 480

Query: 4484 TKKGK-RYINEVLLVPTIDQNLLSVGQMMEKGYSLYFEGDSCTIYDKKDKSLVITKVKMR 4308
               G  + +  V  +P++ + L+  G                  YDKK   +++  V+M 
Sbjct: 481  NGHGNVKLLYNVYFIPSLTEKLVKCG----------------ATYDKKSDQIIVD-VRMA 523

Query: 4307 ENRCFPIQWRYANDAAMTA-QVNDTWLWHRRFGHFNLQGLKILNQKNMMRDLPTIKELDG 4131
             N+ FP++       A+   + +++ LWH R+GH N++GLK+L++K M+ +LP I  ++ 
Sbjct: 524  ANKLFPLEVSSIEKHALVVKETSESNLWHLRYGHLNVKGLKLLSKKEMVFELPKIDSVN- 582

Query: 4130 VCEGCMLGKQHRQPFPSGKAWRAKKPLELVHTDICGPMRTPSNEQNRYFILFIDDYTRMT 3951
            VCEGC+ GKQ ++PFP G++ RA   LE++H D+CGPM+T S   +RYF+LF DD++RM+
Sbjct: 583  VCEGCIYGKQSKKPFPKGRSRRASSCLEIIHADLCGPMQTASFGGSRYFLLFTDDHSRMS 642

Query: 3950 WVYFLREKSQVFDIFKKFKAYVEKQSGHKIKTIRSDRGKEYTSTQFTKFCEDEGVEHQLT 3771
            WVYFL+ K++ F+ FKKFKA+VEKQSG  IK +R+DR  E+ S  F  FCE+EG+  +LT
Sbjct: 643  WVYFLQSKAETFETFKKFKAFVEKQSGKCIKVLRTDRXGEFLSNDFKVFCEEEGLHRELT 702

Query: 3770 VGYAPEQNGVSERKNRTVMETARSMLMEKGLPKSFWAEAVSTAVYLLNRCPTKAVQDKTP 3591
              Y+PEQNGV+ERKNRTV+E ARSM+  K L   FWAE V+TAVYLLN  PTKAV ++TP
Sbjct: 703  TPYSPEQNGVAERKNRTVVEMARSMMXAKNLSNHFWAEGVATAVYLLNISPTKAVLNRTP 762

Query: 3590 VEAWSRRKPSAKHLRVFGCICYVHIPQQKRGKLDEKTEKCIFLGYSTQSKGYRVYSLSTR 3411
             EAW  RKP   HL+VFG + Y       R KLDEK+ KCIF+GY +QSKGY++Y+  + 
Sbjct: 763  YEAWYGRKPWVSHLKVFGSVAYTLXBSHNRSKLDEKSVKCIFIGYCSQSKGYKLYNPVSG 822

Query: 3410 KLIISRDVMFDEDAAYNWETNQ----VEKRSINLPKLTHEQEETSNDP--------PETP 3267
            K+I+SR+V+FDE A+  W  ++    VE  S +    + +Q+ +   P        P +P
Sbjct: 823  KIIVSRNVVFDEKASXTWRVSEDGALVEISSESEMAQSEDQQPSVQIPXSPTPSHSPSSP 882

Query: 3266 ERAXXXXXXXXXXXXXXXTRSLREIYQTCN-LTIMEPDSYEAAAKQEVWVKAXXXXXXXX 3090
              +                RSLR+IY+T   L + +P ++E A ++E W  A        
Sbjct: 883  NLSXSSSSQSSEETPPRKFRSLRDIYETTQVLFVADPTTFEEAVEKEEWCSAMKEEIAAI 942

Query: 3089 XKNETWELTDLPQDKEAIGVKWVYKTKLNPDGSVQKYKARLVAKGYAQQYGIDYSETFAP 2910
             KNETWEL +LP+DK  IGVKWV++TK   DGS+QK+KARLVAKGYAQQ+G+DY +TF+P
Sbjct: 943  EKNETWELVELPEDKNVIGVKWVFRTKYLADGSIQKHKARLVAKGYAQQHGVDYDDTFSP 1002

Query: 2909 VARLDTIRALIALAAQKQWKIYQLDVKFAFLNGYLEEEIYVEQPQGFVVQGKEDKVLRLK 2730
            VAR +T+R L+ALAA   W +YQ DVK AFLNG L EE+Y  QP+GF+V  KE+ V RLK
Sbjct: 1003 VARFETVRTLLALAAHMHWCVYQFDVKSAFLNGELVEEVYXSQPEGFIVPDKEEHVYRLK 1062

Query: 2729 KALYGLKQAPRAWYSRIDDYFTELGFRRSQSEPTLYIKTQGTNNTLIVSLYVDDLIFTGN 2550
             ALYGLKQAPRAWYS+ID YF E GF +S+SEP LY+K QG N+ LI+ LYVDD+I+ G+
Sbjct: 1063 XALYGLKQAPRAWYSKIDSYFVENGFEKSKSEPNLYLKRQGKNDLLIICLYVDDMIYMGS 1122

Query: 2549 NENMIMEFKEDMMKTFEMTDLGLMHYFLGIEIHQRKDGIFISQKKYAESLLKRFKMEGCK 2370
            + ++I EFK  M K FEM+DLGL+H+FLG+E+ Q +DG+F+SQ+KYA  LLK+F M  CK
Sbjct: 1123 SSSLINEFKACMKKKFEMSDLGLLHFFLGLEVKQVEDGVFVSQRKYAVDLLKKFNMLNCK 1182

Query: 2369 TVATPLDNNKALKKEDGSPKADNSQF 2292
             VA P+++N+ L+ EDG+ +AD  +F
Sbjct: 1183 VVAIPMNSNEKLQAEDGTERADARRF 1208



 Score =  181 bits (460), Expect = 3e-42
 Identities = 88/185 (47%), Positives = 118/185 (63%)
 Frame = -1

Query: 2275 PSQIHYGAAKRVLRYLEGTKNYGIWYEPVTNSKLIGYTDSDWAGSIDDMKSTSGYAFTLG 2096
            PS+ H GA KR+LRY+ GT ++ IW   V   KL+GYTDSDWAG ++D KSTSGY F+LG
Sbjct: 1239 PSKQHLGATKRLLRYIAGTYDFRIWXGHVQEFKLVGYTDSDWAGCLEDRKSTSGYMFSLG 1298

Query: 2095 SEIFSWASKKQATVAQSSAEAEYIAAAMTTSQAIWLKRILEDMGEVQEKATKIFCDSKSA 1916
            S                   AEY  A  +  QA+WL+RIL D+ +  E+ T I+CD+K+A
Sbjct: 1299 S-------------------AEYTVATSSACQAVWLRRILADINQEHEEPTVIYCDNKAA 1339

Query: 1915 IAMAKNPVFHNRTKHIKIKYHFIREAEANSEIELEHCKTDEQLADIFTKALPRGKFEILR 1736
            IAM KNP +H RTKH+ I+ HFIR+     ++ L++C T+EQ+AD+ TKAL R K    R
Sbjct: 1340 IAMTKNPAYHGRTKHVDIRVHFIRDLVVEGKVVLQYCNTNEQVADVLTKALSRDKHVYFR 1399

Query: 1735 DMIGV 1721
              +GV
Sbjct: 1400 SKLGV 1404



 Score =  144 bits (363), Expect = 8e-31
 Identities = 71/150 (47%), Positives = 92/150 (61%)
 Frame = -1

Query: 2272 SQIHYGAAKRVLRYLEGTKNYGIWYEPVTNSKLIGYTDSDWAGSIDDMKSTSGYAFTLGS 2093
            S+ H GAA R+LRY+ GT ++ IWY  V   KL+GYTDSDWAG +               
Sbjct: 5    SKQHLGAAXRLLRYIAGTYDFRIWYGHVQEFKLVGYTDSDWAGXV--------------- 49

Query: 2092 EIFSWASKKQATVAQSSAEAEYIAAAMTTSQAIWLKRILEDMGEVQEKATKIFCDSKSAI 1913
                W SKKQA    SS+EAEY A   +  QA+WL+RIL D+ +  E+ T I+CD+K+AI
Sbjct: 50   ---CWXSKKQAVTXLSSSEAEYTAXTSSACQAVWLRRILXDINQEHEEXTVIYCDNKAAI 106

Query: 1912 AMAKNPVFHNRTKHIKIKYHFIREAEANSE 1823
            AM KNP +H RTKH+ I+ HFIR+     E
Sbjct: 107  AMTKNPAYHGRTKHVDIRVHFIRDLVVEGE 136


>gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabidopsis thaliana]
          Length = 1352

 Score =  961 bits (2485), Expect = 0.0
 Identities = 505/1116 (45%), Positives = 717/1116 (64%), Gaps = 42/1116 (3%)
 Frame = -3

Query: 5540 IPVFRGENYDFWSIKMKTYFCAQDLWDIVNNGYTIPNDISTLSAVQKKEFKENQQKDXXX 5361
            +PV    NYD WS++MK    A D+W+IV  G+  P +  +LS  QK   ++++++D   
Sbjct: 10   VPVLTKSNYDNWSLRMKAILGAHDVWEIVEKGFIEPENEGSLSQTQKDGLRDSRKRDKKA 69

Query: 5360 XXXXXXXXADEYFPRIMGAKTAKEAWDKLQEEFQGNEKVRATRLQTLRRKFENLKMLDSE 5181
                     ++ F +++ A +AKEAW+KL+  ++G ++V+  RLQTLR +FE L+M + E
Sbjct: 70   LCLIYQGLDEDTFEKVVEATSAKEAWEKLRTSYKGADQVKKVRLQTLRGEFEALQMKEGE 129

Query: 5180 TAKDYYSRVNEVVNQLRAYGENFPESKIVSKILITCTEKYDPIIAAIEESKDIEKLTATE 5001
               DY+SRV  V N L+  GE   + +I+ K+L +   K++ I+  IEE+KD+E +T  +
Sbjct: 130  LVSDYFSRVLTVTNNLKRNGEKLDDVRIMEKVLRSLDLKFEHIVTVIEETKDLEAMTIEQ 189

Query: 5000 LMGSLEAHEKRLERR---YEKDIDNAFQSKLSMQSQKNKKNGRKYNEGK----------- 4863
            L+GSL+A+E++ +++    E+ ++     + + QS + +  G+    G+           
Sbjct: 190  LLGSLQAYEEKKKKKEDIIEQVLNMQITKEENGQSYQRRGGGQVRGRGRGGYGNGRGWRP 249

Query: 4862 -PTDNNDKFPPCGICKRKSHLEKDCWFKGKPQCQNCKKFGHVEKSCRL----KQRHQANF 4698
               + N +       + K H  K  + K   +C NC KFGH    C+     K   +AN+
Sbjct: 250  HEDNTNQRGENSSRGRGKGH-PKSRYDKSSVKCYNCGKFGHYASECKAPSNKKFEEKANY 308

Query: 4697 SENTEFENNLFYVCQAASEENKDT--WYLDSGCSNHMTKNESIFCQLDK-ISTKIKIGNG 4527
             E    E ++  +     +E ++   WYLDSG SNHM   +S+F +LD+ +   + +G+ 
Sbjct: 309  VEEKIQEEDMLLMASYKKDEQEENHKWYLDSGASNHMCGRKSMFAELDESVRGNVALGDE 368

Query: 4526 DYMEATGKGTIAIDTKKGK-RYINEVLLVPTIDQNLLSVGQMMEKGYSLYFEGDSCTIYD 4350
              ME  GKG I I  K G  ++I+ V  +P++  N+LS+GQ++EKGY +  + ++ +I D
Sbjct: 369  SKMEVKGKGNILIRLKNGDHQFISNVYYIPSMKTNILSLGQLLEKGYDIRLKDNNLSIRD 428

Query: 4349 KKDKSLVITKVKMRENRCFPIQWRYANDAAMTAQV---NDTWLWHRRFGHFNLQGLKILN 4179
            ++  S +ITKV M +NR F +  R  ND A   ++    ++WLWH RFGH N  GL++L+
Sbjct: 429  QE--SNLITKVPMSKNRMFVLNIR--NDIAQCLKMCYKEESWLWHLRFGHLNFGGLELLS 484

Query: 4178 QKNMMRDLPTIKELDGVCEGCMLGKQHRQPFPSGKAWRAKKPLELVHTDICGPMRTPSNE 3999
            +K M+R LP I   + VCEGC+LGKQ +  FP   + RA+K LEL+HTD+CGP++  S  
Sbjct: 485  RKEMVRGLPCINHPNQVCEGCLLGKQFKMSFPKESSSRAQKSLELIHTDVCGPIKPKSLG 544

Query: 3998 QNRYFILFIDDYTRMTWVYFLREKSQVFDIFKKFKAYVEKQSGHKIKTIRSDRGKEYTST 3819
            ++ YF+LFIDD++R TWVYFL+EKS+VF+IFKKFKA+VEK+SG  IKT+RSDRG E+TS 
Sbjct: 545  KSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKTMRSDRGGEFTSK 604

Query: 3818 QFTKFCEDEGVEHQLTVGYAPEQNGVSERKNRTVMETARSMLMEKGLPKSFWAEAVSTAV 3639
            +F K+CED G+  QLTV  +P+QNGV+ERKNRT++E ARSML  K LPK  WAEAV+ AV
Sbjct: 605  EFLKYCEDNGIRRQLTVPRSPQQNGVAERKNRTILEMARSMLKSKRLPKELWAEAVACAV 664

Query: 3638 YLLNRCPTKAVQDKTPVEAWSRRKPSAKHLRVFGCICYVHIPQQKRGKLDEKTEKCIFLG 3459
            YLLNR PTK+V  KTP EAWS RK    HLRVFG I + H+P +KR KLD+K+EK IF+G
Sbjct: 665  YLLNRSPTKSVSGKTPQEAWSGRKSGVSHLRVFGSIAHAHVPDEKRSKLDDKSEKYIFIG 724

Query: 3458 YSTQSKGYRVYSLSTRKLIISRDVMFDEDAAYNWETNQVEKRSI-----NLPKLTHEQEE 3294
            Y   SKGY++Y+  T+K IISR+++FDE+  ++W +N+ +         + P+ T E E 
Sbjct: 725  YDNNSKGYKLYNPDTKKTIISRNIVFDEEGEWDWNSNEEDYNFFPHFEEDEPEPTRE-EP 783

Query: 3293 TSNDPPETPERAXXXXXXXXXXXXXXXTRSLREIYQTC----NLTIM------EPDSYEA 3144
             S +P   P                   RS++E+Y+      NLT+       EP  ++ 
Sbjct: 784  PSEEPTTPPTSPTSSQIEESSSERTPRFRSIQELYEVTENQENLTLFCLFAECEPMDFQE 843

Query: 3143 AAKQEVWVKAXXXXXXXXXKNETWELTDLPQDKEAIGVKWVYKTKLNPDGSVQKYKARLV 2964
            A +++ W  A         KN+TWELT LP   + IGVKWVYK K N  G V++YKARLV
Sbjct: 844  AIEKKTWRNAMDEEIKSIQKNDTWELTSLPNGHKTIGVKWVYKAKKNSKGEVERYKARLV 903

Query: 2963 AKGYAQQYGIDYSETFAPVARLDTIRALIALAAQKQWKIYQLDVKFAFLNGYLEEEIYVE 2784
            AKGY Q+ GIDY E FAPVARL+T+R +I+LAAQ +WKI+Q+DVK AFLNG LEEE+Y+E
Sbjct: 904  AKGYIQRAGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIE 963

Query: 2783 QPQGFVVQGKEDKVLRLKKALYGLKQAPRAWYSRIDDYFTELGFRRSQSEPTLYIKTQGT 2604
            QPQG++V+G+EDKVLRLKKALYGLKQAPRAW +RID YF E  F +   E  LYIK Q  
Sbjct: 964  QPQGYIVKGEEDKVLRLKKALYGLKQAPRAWNTRIDKYFKEKDFIKCPYEHALYIKIQ-K 1022

Query: 2603 NNTLIVSLYVDDLIFTGNNENMIMEFKEDMMKTFEMTDLGLMHYFLGIEIHQRKDGIFIS 2424
             + LI  LYVDDLIFTGNN +M  EFK++M K FEMTD+GLM Y+LGIE+ Q  +GIFI+
Sbjct: 1023 EDILIACLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIFIT 1082

Query: 2423 QKKYAESLLKRFKMEGCKTVATPLD-NNKALKKEDG 2319
            Q+ YA+ +LK+FKM+    V TP++   K  KKE+G
Sbjct: 1083 QEGYAKEVLKKFKMDDSNPVCTPMECGIKLSKKEEG 1118



 Score =  213 bits (541), Expect = 7e-52
 Identities = 96/188 (51%), Positives = 137/188 (72%)
 Frame = -1

Query: 2278 NPSQIHYGAAKRVLRYLEGTKNYGIWYEPVTNSKLIGYTDSDWAGSIDDMKSTSGYAFTL 2099
            +P+  H+ AAKR+LRY++GT N+G+ Y   ++ KL+GY+DSDW G +DD KSTSG+ F +
Sbjct: 1156 HPTTTHFKAAKRILRYIKGTVNFGLHYSTTSDYKLVGYSDSDWGGDVDDRKSTSGFVFYI 1215

Query: 2098 GSEIFSWASKKQATVAQSSAEAEYIAAAMTTSQAIWLKRILEDMGEVQEKATKIFCDSKS 1919
            G   F+W SKKQ  V  S+ EAEY+AA      AIWL+ +L+++   QE+ TKIF D+KS
Sbjct: 1216 GDTAFTWMSKKQPIVVLSTCEAEYVAATSCVCHAIWLRNLLKELSLPQEEPTKIFVDNKS 1275

Query: 1918 AIAMAKNPVFHNRTKHIKIKYHFIREAEANSEIELEHCKTDEQLADIFTKALPRGKFEIL 1739
            AIA+AKNPVFH+R+KHI  +YH+IRE  +  +++LE+ KT +Q+ADIFTK L R  F  +
Sbjct: 1276 AIALAKNPVFHDRSKHIDTRYHYIRECVSKKDVQLEYVKTHDQVADIFTKPLKREDFIKM 1335

Query: 1738 RDMIGVTE 1715
            R ++GV +
Sbjct: 1336 RSLLGVAK 1343