BLASTX nr result
ID: Rehmannia27_contig00057424
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia27_contig00057424
(405 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CDP09717.1| unnamed protein product [Coffea canephora] 91 1e-18
emb|CDP00431.1| unnamed protein product [Coffea canephora] 86 3e-17
emb|CDP14369.1| unnamed protein product [Coffea canephora] 84 1e-16
emb|CDP14470.1| unnamed protein product [Coffea canephora] 81 3e-15
ref|XP_013668546.1| PREDICTED: CHD3-type chromatin-remodeling fa... 74 7e-13
emb|CDP04274.1| unnamed protein product [Coffea canephora] 68 2e-12
ref|XP_015168279.1| PREDICTED: uncharacterized protein LOC107062... 69 9e-12
ref|XP_010463143.1| PREDICTED: uncharacterized protein LOC104743... 69 3e-11
ref|XP_010445988.1| PREDICTED: uncharacterized protein LOC104728... 68 4e-11
ref|XP_008234850.1| PREDICTED: putative ribonuclease H protein A... 69 5e-11
ref|XP_010480837.1| PREDICTED: uncharacterized protein LOC104759... 68 6e-11
ref|XP_008236463.1| PREDICTED: uncharacterized protein LOC103335... 68 6e-11
ref|XP_010687479.1| PREDICTED: uncharacterized protein LOC104901... 68 9e-11
ref|XP_006285450.1| hypothetical protein CARUB_v10006875mg, part... 67 2e-10
ref|XP_013726547.1| PREDICTED: uncharacterized protein LOC106430... 67 2e-10
ref|XP_009120002.1| PREDICTED: putative ribonuclease H protein A... 67 2e-10
ref|XP_010513204.1| PREDICTED: uncharacterized protein LOC104789... 67 3e-10
ref|XP_010666374.1| PREDICTED: uncharacterized protein LOC104883... 66 3e-10
ref|NP_189164.1| ribonuclease H-like protein [Arabidopsis thalia... 66 3e-10
ref|XP_008359621.1| PREDICTED: putative ribonuclease H protein A... 66 3e-10
>emb|CDP09717.1| unnamed protein product [Coffea canephora]
Length = 613
Score = 90.5 bits (223), Expect = 1e-18
Identities = 40/111 (36%), Positives = 61/111 (54%)
Frame = -3
Query: 373 DPRCGWCGEDVESVDHVFFQCQRAKKIWKFSPVQWEDIELGSMSFQDWWYRFLTSKQFKC 194
DP C CGE ES++H+FFQC RA+++WK +P+QW+ + + + WW L +
Sbjct: 339 DPICDGCGEQEESIEHLFFQCSRAQEVWKMAPIQWDGLTEQTRNILVWWNSMLEATNRIE 398
Query: 193 LQNRIHFSVFILWWIWKARNLWVFQSQEIKEPEVSHLAWMDWQEFSEGSRK 41
+ + +V ILW IWK RN W F ++ E A +WQE + R+
Sbjct: 399 GREHVELTVNILWQIWKRRNEWKFNAKRRHPWESIKKALQEWQEQASAWRE 449
>emb|CDP00431.1| unnamed protein product [Coffea canephora]
Length = 344
Score = 85.5 bits (210), Expect = 3e-17
Identities = 36/117 (30%), Positives = 63/117 (53%)
Frame = -3
Query: 403 ENIARRGVSIDPRCGWCGEDVESVDHVFFQCQRAKKIWKFSPVQWEDIELGSMSFQDWWY 224
E I RR P C CG+ +E+++H+ F C +A+K+WK +P+QW+ I+ + F+ WW
Sbjct: 211 ETIFRRTKQGSPICSRCGDGMETIEHILFHCHQAQKVWKLAPIQWDGIQNQTGCFKKWWA 270
Query: 223 RFLTSKQFKCLQNRIHFSVFILWWIWKARNLWVFQSQEIKEPEVSHLAWMDWQEFSE 53
+ + I + +LW +WK RN F+ +E + ++ A +W E+ E
Sbjct: 271 ALSQATSRTEGRQHIALTANLLWQLWKDRNQMEFEGKEREGLKIVQKASSEWMEYEE 327
>emb|CDP14369.1| unnamed protein product [Coffea canephora]
Length = 347
Score = 83.6 bits (205), Expect = 1e-16
Identities = 38/107 (35%), Positives = 57/107 (53%)
Frame = -3
Query: 373 DPRCGWCGEDVESVDHVFFQCQRAKKIWKFSPVQWEDIELGSMSFQDWWYRFLTSKQFKC 194
D C CGE E+++H+ F C A IWK +PV W +E +F WW ++ +
Sbjct: 54 DSVCKCCGEYPETIEHLLFFCDNALAIWKVAPVSWAGLECLRNNFGHWWEEIREARAMES 113
Query: 193 LQNRIHFSVFILWWIWKARNLWVFQSQEIKEPEVSHLAWMDWQEFSE 53
Q RI +V +LW IWK+RN F+ + + V + A +W+EF E
Sbjct: 114 GQERIELTVNVLWQIWKSRNRRQFEDKGMDPMTVVNKATREWREFQE 160
>emb|CDP14470.1| unnamed protein product [Coffea canephora]
Length = 660
Score = 80.9 bits (198), Expect = 3e-15
Identities = 35/115 (30%), Positives = 61/115 (53%), Gaps = 4/115 (3%)
Frame = -3
Query: 373 DPRCGWCGEDVESVDHVFFQCQRAKKIWKFSPVQWEDIELGSMSFQDWWYRFLTSKQFKC 194
DP C CGED E+V+H+ CQ ++++WK +P+QW+ F+ WW R ++ +
Sbjct: 384 DPVCRLCGEDQETVEHLMLNCQHSQQVWKAAPIQWDGAMDQKGDFRRWWIRISEARTRQG 443
Query: 193 LQNRIHFSVFILWWIWKARNLWVFQSQEIKEPE----VSHLAWMDWQEFSEGSRK 41
I + ILW +WK RN F+++ P + W++ +EF++G +
Sbjct: 444 GMEHIGLTAIILWQLWKERNSKEFENKTSCSPARTIGKAQKEWLEQEEFTKGKTR 498
>ref|XP_013668546.1| PREDICTED: CHD3-type chromatin-remodeling factor PICKLE-like
[Brassica napus]
Length = 1118
Score = 73.9 bits (180), Expect = 7e-13
Identities = 43/99 (43%), Positives = 57/99 (57%), Gaps = 4/99 (4%)
Frame = -3
Query: 403 ENIARRGVSIDPRCGWCGEDVESVDHVFFQCQRAKKIWKFSPVQWEDIELGSMSFQDWWY 224
E + R V +DPRC CGE ES+ H+FFQCQ A+K+W+ +P E G + D W
Sbjct: 47 ERLLDRHVPVDPRCKRCGES-ESIIHLFFQCQYARKVWRLAPFTTELEIRGMIDLVDLWL 105
Query: 223 RFLTSKQFKCLQ----NRIHFSVFILWWIWKARNLWVFQ 119
L SKQ CL +++ILW IWKARN +VF+
Sbjct: 106 -LLCSKQ--CLLPAGITSKFLALWILWSIWKARNKFVFE 141
>emb|CDP04274.1| unnamed protein product [Coffea canephora]
Length = 100
Score = 67.8 bits (164), Expect = 2e-12
Identities = 29/77 (37%), Positives = 48/77 (62%)
Frame = -3
Query: 352 GEDVESVDHVFFQCQRAKKIWKFSPVQWEDIELGSMSFQDWWYRFLTSKQFKCLQNRIHF 173
GE+VE+++ +FFQC A+ +WK +PV+WE + + WW + ++ + +I+
Sbjct: 23 GEEVETMERMFFQCPIAQIVWKIAPVRWEGLRDLQTNMWRWWEAVVQTRTKEQGMEQINL 82
Query: 172 SVFILWWIWKARNLWVF 122
+ ILW IWKARN +VF
Sbjct: 83 TTNILWLIWKARNKFVF 99
>ref|XP_015168279.1| PREDICTED: uncharacterized protein LOC107062294 [Solanum tuberosum]
Length = 199
Score = 68.6 bits (166), Expect = 9e-12
Identities = 32/100 (32%), Positives = 53/100 (53%), Gaps = 1/100 (1%)
Frame = -3
Query: 355 CGEDVESVDHVFFQCQRAKKIWKFSPVQWEDIELGSMSFQDWWYRFLTS-KQFKCLQNRI 179
CG + E++DH+ F+C A+ +WK P+ W ++E + F WW T+ K++ I
Sbjct: 11 CGLESETIDHMLFRCPSAQLVWKICPINWPNLE-NIVDFAGWWNDLFTNVKKYPDSIELI 69
Query: 178 HFSVFILWWIWKARNLWVFQSQEIKEPEVSHLAWMDWQEF 59
S I+W IWKARN F + ++ + A D+ E+
Sbjct: 70 KLSFSIMWQIWKARNSKSFNGEISNPNDIVNKALFDFHEY 109
>ref|XP_010463143.1| PREDICTED: uncharacterized protein LOC104743796 [Camelina sativa]
Length = 761
Score = 69.3 bits (168), Expect = 3e-11
Identities = 41/124 (33%), Positives = 69/124 (55%), Gaps = 4/124 (3%)
Frame = -3
Query: 403 ENIARRGVSIDPRCGWCGEDVESVDHVFFQCQRAKKIWKFSPVQWEDIELG-SMSFQDWW 227
E +++R + + C CGE +ES+ H+ FQC+ AK+IW+ SP+ +L + S ++
Sbjct: 471 ETLSQRCIKVLRDCNLCGEALESITHLLFQCRVAKEIWELSPIPINPGQLDPNCSLIEYI 530
Query: 226 YRFLTSKQFKCLQNRIHFSVFILWWIWKARNLWVFQSQEIKEPEVSHLAWMD---WQEFS 56
+ L+ K L+ I FI W IWKARN ++ ++ P++ + A MD W+E +
Sbjct: 531 QKLLSLKNEGSLKEYIF--PFIGWRIWKARNDLLYNNKRWAIPDIINKALMDYRLWREAN 588
Query: 55 EGSR 44
G R
Sbjct: 589 NGLR 592
>ref|XP_010445988.1| PREDICTED: uncharacterized protein LOC104728742 [Camelina sativa]
Length = 283
Score = 68.2 bits (165), Expect = 4e-11
Identities = 37/119 (31%), Positives = 62/119 (52%), Gaps = 3/119 (2%)
Frame = -3
Query: 400 NIARRGVSIDPRCGWCGEDVESVDHVFFQCQRAKKIWKFSPVQWEDIELGSMSFQDWWYR 221
N+ R G++ D C CG D E+++H F C A+++W S V I + S
Sbjct: 99 NLRRWGIACDLGCSRCGADDETINHAIFVCPSARQVWALSHVPVGPISFPTDSLYANMDH 158
Query: 220 FLTSKQFKCLQNRIHFSVFILWWIWKARNLWVFQSQEIKEPEVSHLA---WMDWQEFSE 53
FL SK ++ +++W+IWKARN WVF++++ + E+ +A + WQ+ E
Sbjct: 159 FLGSKN---PVSQASDFPWVMWYIWKARNAWVFENKDEQPGEIFRVAKGEALSWQQEQE 214
>ref|XP_008234850.1| PREDICTED: putative ribonuclease H protein At1g65750 [Prunus mume]
Length = 1009
Score = 68.6 bits (166), Expect = 5e-11
Identities = 40/115 (34%), Positives = 54/115 (46%), Gaps = 1/115 (0%)
Frame = -3
Query: 400 NIARRGVSIDPRCGWCGEDVESVDHVFFQCQRAKKIWKFSPVQWEDIELGSMSFQDWWYR 221
N+ RR V CG+CG E+ H+FF+C A+ W SP+Q + +L F W
Sbjct: 708 NLRRRRVPCTGECGFCGFQDETQAHIFFECDFARAFWFASPLQLDVSKLAGDDFISTWQH 767
Query: 220 FLTS-KQFKCLQNRIHFSVFILWWIWKARNLWVFQSQEIKEPEVSHLAWMDWQEF 59
+T+ + I + VF LW IWKARNL VF + E L EF
Sbjct: 768 MMTTLNSSEHAAEAIQWFVFGLWRIWKARNLAVFDGVQADPIEAVLLLLKQVSEF 822
>ref|XP_010480837.1| PREDICTED: uncharacterized protein LOC104759625 [Camelina sativa]
Length = 304
Score = 67.8 bits (164), Expect = 6e-11
Identities = 34/107 (31%), Positives = 60/107 (56%)
Frame = -3
Query: 400 NIARRGVSIDPRCGWCGEDVESVDHVFFQCQRAKKIWKFSPVQWEDIELGSMSFQDWWYR 221
N++RRG+S + C CG +VE+++H F+C A+++W + V + + S
Sbjct: 14 NLSRRGISYEVGCTRCGAEVETINHAIFRCPPARQVWALAHVPVGPLHFPTDSVYANVDH 73
Query: 220 FLTSKQFKCLQNRIHFSVFILWWIWKARNLWVFQSQEIKEPEVSHLA 80
FL S L +++ +++W+IWKARN VF++Q + E+ LA
Sbjct: 74 FLGSTN---LGSQVQIFPWLMWYIWKARNARVFENQMDRPDEIVRLA 117
>ref|XP_008236463.1| PREDICTED: uncharacterized protein LOC103335231 [Prunus mume]
Length = 408
Score = 68.2 bits (165), Expect = 6e-11
Identities = 37/103 (35%), Positives = 51/103 (49%), Gaps = 1/103 (0%)
Frame = -3
Query: 400 NIARRGVSIDPRCGWCGEDVESVDHVFFQCQRAKKIWKFSPVQWEDIELGSMSFQDWWYR 221
N+ RR V CG+CG E+ H+FF+C A+ W SP+Q + +L F W
Sbjct: 214 NLRRRRVPCTGECGFCGFQDETQAHIFFECDFARAFWFASPLQLDVSKLAGDDFISTWQH 273
Query: 220 FLTS-KQFKCLQNRIHFSVFILWWIWKARNLWVFQSQEIKEPE 95
+T+ + I + VF LW IWKARNL VF + E
Sbjct: 274 MMTTLNSSEHAAEAIQWFVFGLWRIWKARNLAVFDGVQADPTE 316
>ref|XP_010687479.1| PREDICTED: uncharacterized protein LOC104901585 [Beta vulgaris
subsp. vulgaris]
Length = 485
Score = 67.8 bits (164), Expect = 9e-11
Identities = 33/97 (34%), Positives = 56/97 (57%)
Frame = -3
Query: 400 NIARRGVSIDPRCGWCGEDVESVDHVFFQCQRAKKIWKFSPVQWEDIELGSMSFQDWWYR 221
N+ARRGV I+ C CGE E+++H+ C ++K+W +SP++ + +GS F +W R
Sbjct: 196 NLARRGVEIEKMCPRCGEFDETLEHMLLFCPESRKVWYYSPLRVDVETVGSGRFHEWVER 255
Query: 220 FLTSKQFKCLQNRIHFSVFILWWIWKARNLWVFQSQE 110
L + Q K + F+ W IW +N+W F+ ++
Sbjct: 256 -LAAAQLK--DDWWALFWFLCWNIWLGQNVWTFEGKK 289
>ref|XP_006285450.1| hypothetical protein CARUB_v10006875mg, partial [Capsella rubella]
gi|482554155|gb|EOA18348.1| hypothetical protein
CARUB_v10006875mg, partial [Capsella rubella]
Length = 438
Score = 67.0 bits (162), Expect = 2e-10
Identities = 35/118 (29%), Positives = 56/118 (47%), Gaps = 3/118 (2%)
Frame = -3
Query: 403 ENIARRGVSIDPRCGWCGEDVESVDHVFFQCQRAKKIWKFSPVQWEDIELGSMSFQD--- 233
+N+ RR ++I+P C WC D ES +H+FF C R IW+ V + ++S +D
Sbjct: 133 DNLRRRNININPYCSWCCSDFESSEHIFFTCPRVHPIWRMVGVPLTLLGDPNISLEDKLR 192
Query: 232 WWYRFLTSKQFKCLQNRIHFSVFILWWIWKARNLWVFQSQEIKEPEVSHLAWMDWQEF 59
+ +R + F +LW +WK RN VF + EV +D +E+
Sbjct: 193 YLFRLHNDSSLPIFKRTSPF--LVLWRLWKTRNNLVFNRKSTTTEEVFKYICLDTEEW 248
>ref|XP_013726547.1| PREDICTED: uncharacterized protein LOC106430305 [Brassica napus]
Length = 519
Score = 67.0 bits (162), Expect = 2e-10
Identities = 35/122 (28%), Positives = 60/122 (49%), Gaps = 2/122 (1%)
Frame = -3
Query: 403 ENIARRGVSIDPRCGWCGEDVESVDHVFFQCQRAKKIWKFS--PVQWEDIELGSMSFQDW 230
+ + RG+ IDPRC CG D ES++HV F C A+++W S P E ++ F+++
Sbjct: 219 DGLLARGLKIDPRCQRCGMDGESINHVLFTCPVARRVWAESNFPFPRRSFENRTV-FENF 277
Query: 229 WYRFLTSKQFKCLQNRIHFSVFILWWIWKARNLWVFQSQEIKEPEVSHLAWMDWQEFSEG 50
+Y + + H ++LW +WK RN ++F +E + A D + E
Sbjct: 278 YYLLFPTNGSRVPDEVAHLFPWLLWLLWKNRNSFIFDGKEFSAQDTVAKAKEDSSHWFEA 337
Query: 49 SR 44
+
Sbjct: 338 QK 339
>ref|XP_009120002.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica
rapa] gi|685302818|ref|XP_009142112.1| PREDICTED:
putative ribonuclease H protein At1g65750 [Brassica
rapa] gi|685350481|ref|XP_009110743.1| PREDICTED:
putative ribonuclease H protein At1g65750 [Brassica
rapa]
Length = 612
Score = 67.0 bits (162), Expect = 2e-10
Identities = 38/122 (31%), Positives = 61/122 (50%), Gaps = 1/122 (0%)
Frame = -3
Query: 403 ENIARRGVSIDPRCGWCGEDVESVDHVFFQCQRAKKIWKFSPVQWEDIELGSMSFQDWWY 224
E +A R + CG CG VES+DHVFF C A+++W+ PV+ + + L S F D W
Sbjct: 341 ERLAARNIIPTAECGVCGA-VESIDHVFFSCPLAQEVWRMVPVKNDILPLESDRFVDNWI 399
Query: 223 RFLTSKQFKCL-QNRIHFSVFILWWIWKARNLWVFQSQEIKEPEVSHLAWMDWQEFSEGS 47
+ + N + +++W +W RN +FQ + EV A +D +E++
Sbjct: 400 AVVGAVSLPPTGVNAGSITAWVIWRLWTTRNYRIFQEKIFTPQEVVTKAIVDAKEWAVAQ 459
Query: 46 RK 41
K
Sbjct: 460 EK 461
>ref|XP_010513204.1| PREDICTED: uncharacterized protein LOC104789164 [Camelina sativa]
Length = 1030
Score = 66.6 bits (161), Expect = 3e-10
Identities = 40/119 (33%), Positives = 61/119 (51%), Gaps = 5/119 (4%)
Frame = -3
Query: 403 ENIARRGVSIDPRCGWCGEDVESVDHVFFQCQRAKKIWKFSPVQWE--DIELGSMSFQDW 230
E +A RGV D C CG +VE+++H F+C R++ IW+ SPVQ GS+ + +
Sbjct: 752 ERLAHRGVRCDDMCLRCGSEVETINHALFECVRSRLIWELSPVQLSLTGFPFGSV-YSNL 810
Query: 229 WYRFLTSKQFKCLQNRIHFSVFILWWIWKARNLWVFQSQEIKEPEVSHLAWMD---WQE 62
Y + + + +ILW IWK RN VFQ E + ++ + A D W+E
Sbjct: 811 DYLYSNTFSNSGGSGICYMLPWILWTIWKDRNNKVFQGIEAEPMDIINQALNDKLFWEE 869
>ref|XP_010666374.1| PREDICTED: uncharacterized protein LOC104883530 [Beta vulgaris
subsp. vulgaris]
Length = 283
Score = 65.9 bits (159), Expect = 3e-10
Identities = 38/116 (32%), Positives = 59/116 (50%)
Frame = -3
Query: 403 ENIARRGVSIDPRCGWCGEDVESVDHVFFQCQRAKKIWKFSPVQWEDIELGSMSFQDWWY 224
+N++RRG +D CG VE++ H F C A+ +WK SP++ E SF D W
Sbjct: 9 DNLSRRGCDVDRIFPMCGNGVETILHALFLCPIAQLVWKVSPLRLEVFVGLGESFMD-WV 67
Query: 223 RFLTSKQFKCLQNRIHFSVFILWWIWKARNLWVFQSQEIKEPEVSHLAWMDWQEFS 56
+F K L + +S +LW IW +N WVF+++ ++ V A EF+
Sbjct: 68 KFFALKFTDDLWWALFWS--LLWGIWLNKNAWVFENRNLEAVNVVERAISKMGEFN 121
>ref|NP_189164.1| ribonuclease H-like protein [Arabidopsis thaliana]
gi|9294184|dbj|BAB02086.1| reverse transcriptase-like
protein [Arabidopsis thaliana]
gi|332643482|gb|AEE77003.1| ribonuclease H-like protein
[Arabidopsis thaliana]
Length = 343
Score = 66.2 bits (160), Expect = 3e-10
Identities = 35/121 (28%), Positives = 64/121 (52%), Gaps = 4/121 (3%)
Frame = -3
Query: 403 ENIARRGVSIDPRCGWCGEDVESVDHVFFQCQRAKKIWKFSPVQWEDIELGSMSFQDWWY 224
+N+ RR + P+C C ++ E+ H+FF C A+++W+ S + +++ ++ +
Sbjct: 43 DNLKRRHIRNHPQCHRCCQEDETSQHLFFDCFYAQQVWRASGIPHQELRTTGITMETKME 102
Query: 223 RFLTSKQFKCLQNR----IHFSVFILWWIWKARNLWVFQSQEIKEPEVSHLAWMDWQEFS 56
L+S CL NR + +++ILW +WK+RN VFQ + I A D QE+
Sbjct: 103 LLLSS----CLANRQPQLFNLAIWILWRLWKSRNQLVFQQKSISWQNTLQRARNDVQEWE 158
Query: 55 E 53
+
Sbjct: 159 D 159
>ref|XP_008359621.1| PREDICTED: putative ribonuclease H protein At1g65750 [Malus
domestica]
Length = 516
Score = 66.2 bits (160), Expect = 3e-10
Identities = 38/124 (30%), Positives = 62/124 (50%), Gaps = 6/124 (4%)
Frame = -3
Query: 400 NIARRGVSIDPRCGWCGEDVESVDHVFFQCQRAKKIWKFSPVQWEDIELGSMSFQDWWYR 221
N+ RR + +D CG C E+ +H++F+C + W S + ++L + F D W +
Sbjct: 209 NLQRRHMKVDNVCGVCNSPDETENHLYFRCNFSHLFWFCSHLHLNSLQLKGVDFLDSWGK 268
Query: 220 FLTSKQFKCLQNRIHFS------VFILWWIWKARNLWVFQSQEIKEPEVSHLAWMDWQEF 59
F KC+++R++ + F LW +WK RN VFQ + EV L + +EF
Sbjct: 269 F-----HKCVKDRVNVNEIYQEFAFGLWRLWKNRNAVVFQGXHRQPLEVLDLWRKNIKEF 323
Query: 58 SEGS 47
E S
Sbjct: 324 REAS 327