BLASTX nr result

ID: Rehmannia27_contig00057300 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia27_contig00057300
         (425 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003141992.1| hypothetical protein LOAG_06408 [Loa loa]          58   2e-08
gb|KYN05510.1| hypothetical protein ALC62_03547 [Cyphomyrmex cos...    55   1e-06
ref|XP_004990473.1| hypothetical protein PTSG_08682 [Salpingoeca...    55   5e-06
ref|XP_001894123.1| T-cell receptor beta chain ANA 11 [Brugia ma...    52   7e-06

>ref|XP_003141992.1| hypothetical protein LOAG_06408 [Loa loa]
          Length = 100

 Score = 57.8 bits (138), Expect = 2e-08
 Identities = 35/91 (38%), Positives = 47/91 (51%)
 Frame = +2

Query: 32  TFRNNILSNSHSQPLA*TSISVGCPVSFPRSDHRRHFRQPLRHLFQLSSPHTNTHSTHAH 211
           TF N+  SN H+ P++ T +    P+  P   H+      +RH     + HT+TH  H H
Sbjct: 15  TFTNSTASNQHTHPISHTKLPY--PILTPNEFHKDD-AHAVRH-----NTHTHTH-IHTH 65

Query: 212 QIT*THTPCYTDTHSELCTHTHTLIHYCTHI 304
             T THT  +T TH+   THTHT  H  THI
Sbjct: 66  TDTHTHTYMHTHTHARTHTHTHTHTHTYTHI 96


>gb|KYN05510.1| hypothetical protein ALC62_03547 [Cyphomyrmex costatus]
          Length = 215

 Score = 55.5 bits (132), Expect = 1e-06
 Identities = 28/57 (49%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
 Frame = +2

Query: 182 HTNTHS-THAHQIT*THTPCYTDTHSELCTHTHTLIHYCTHISQNFKSIPIFPSKIS 349
           HT+TH+ TH H  T THT  +T TH+   THTHT  H  TH     +SIP  P  IS
Sbjct: 149 HTHTHTHTHTHTHTHTHTHTHTHTHTHTHTHTHTHTHTHTHTHTRTQSIPSLPQNIS 205


>ref|XP_004990473.1| hypothetical protein PTSG_08682 [Salpingoeca rosetta]
           gi|326432015|gb|EGD77585.1| hypothetical protein
           PTSG_08682 [Salpingoeca rosetta]
          Length = 2404

 Score = 54.7 bits (130), Expect = 5e-06
 Identities = 27/50 (54%), Positives = 30/50 (60%), Gaps = 3/50 (6%)
 Frame = +2

Query: 158 HLFQLSSPHTNTHS---THAHQIT*THTPCYTDTHSELCTHTHTLIHYCT 298
           H F LS  HT+THS   TH H  T THT  +T TH+   THTHT  H CT
Sbjct: 255 HTFTLSLTHTHTHSHIHTHTHTHTHTHTHTHTHTHTHTHTHTHTHTHTCT 304


>ref|XP_001894123.1| T-cell receptor beta chain ANA 11 [Brugia malayi]
          Length = 133

 Score = 52.0 bits (123), Expect = 7e-06
 Identities = 25/49 (51%), Positives = 30/49 (61%)
 Frame = +2

Query: 158 HLFQLSSPHTNTHSTHAHQIT*THTPCYTDTHSELCTHTHTLIHYCTHI 304
           H++     HT+TH TH H  T THT  YT TH++  THTHT  H  THI
Sbjct: 61  HIYTHIHTHTHTH-THTHTHTHTHTHTYTHTHTDTHTHTHTHTHTHTHI 108


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