BLASTX nr result

ID: Rehmannia27_contig00057258 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia27_contig00057258
         (405 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011084684.1| PREDICTED: INO80 complex subunit D-like [Ses...    58   5e-13
ref|XP_012834842.1| PREDICTED: INO80 complex subunit D-like [Ery...    53   2e-07
gb|EYU39741.1| hypothetical protein MIMGU_mgv11b011126mg [Erythr...    53   2e-07

>ref|XP_011084684.1| PREDICTED: INO80 complex subunit D-like [Sesamum indicum]
          Length = 288

 Score = 58.2 bits (139), Expect(2) = 5e-13
 Identities = 31/47 (65%), Positives = 35/47 (74%)
 Frame = -2

Query: 143 DCTLS*SEFMARTEVLNRRSRRA*QLARICR*HYRAFIEELKL*YRE 3
           D  LS SEF+ R EV+NRR+RR  QLARI R HY A +EELKL YRE
Sbjct: 62  DAALSKSEFLTRPEVINRRARRVKQLARIYRDHYWALMEELKLKYRE 108



 Score = 42.7 bits (99), Expect(2) = 5e-13
 Identities = 27/50 (54%), Positives = 29/50 (58%)
 Frame = -3

Query: 313 PLQAAIPAASGSQNPLSIFFLSSKSELGTFYLHTTIMLDP*LSSSSGPIR 164
           P  AA  AAS   N  S F LS K+EL  F    + MLDP  SSSSGPIR
Sbjct: 6   PTAAAAAAASSGLNHNSTFPLSFKTELKPFSQQASEMLDPSSSSSSGPIR 55


>ref|XP_012834842.1| PREDICTED: INO80 complex subunit D-like [Erythranthe guttata]
          Length = 293

 Score = 53.1 bits (126), Expect(2) = 2e-07
 Identities = 28/47 (59%), Positives = 33/47 (70%)
 Frame = -2

Query: 143 DCTLS*SEFMARTEVLNRRSRRA*QLARICR*HYRAFIEELKL*YRE 3
           D  LS SEF+ R EV+NRR+RR  QLARI R HY   +EELK  YR+
Sbjct: 67  DAALSKSEFLTRPEVINRRARRVKQLARIYRDHYWTLMEELKYKYRK 113



 Score = 28.9 bits (63), Expect(2) = 2e-07
 Identities = 21/48 (43%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
 Frame = -3

Query: 304 AAIPAASGSQNPLSIFFLSSKSELGTFYLHTTIMLDP--*LSSSSGPI 167
           AA  AA   QN  S+   S K E     +HT   LDP    SS+SGPI
Sbjct: 12  AAAAAAFSRQNQHSVATHSVKPEFSPLTMHTPGTLDPSSASSSASGPI 59


>gb|EYU39741.1| hypothetical protein MIMGU_mgv11b011126mg [Erythranthe guttata]
          Length = 223

 Score = 53.1 bits (126), Expect(2) = 2e-07
 Identities = 28/47 (59%), Positives = 33/47 (70%)
 Frame = -2

Query: 143 DCTLS*SEFMARTEVLNRRSRRA*QLARICR*HYRAFIEELKL*YRE 3
           D  LS SEF+ R EV+NRR+RR  QLARI R HY   +EELK  YR+
Sbjct: 67  DAALSKSEFLTRPEVINRRARRVKQLARIYRDHYWTLMEELKYKYRK 113



 Score = 28.9 bits (63), Expect(2) = 2e-07
 Identities = 21/48 (43%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
 Frame = -3

Query: 304 AAIPAASGSQNPLSIFFLSSKSELGTFYLHTTIMLDP--*LSSSSGPI 167
           AA  AA   QN  S+   S K E     +HT   LDP    SS+SGPI
Sbjct: 12  AAAAAAFSRQNQHSVATHSVKPEFSPLTMHTPGTLDPSSASSSASGPI 59


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