BLASTX nr result

ID: Rehmannia27_contig00057202 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia27_contig00057202
         (503 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga...    61   5e-08
ref|XP_009139324.1| PREDICTED: uncharacterized protein LOC103863...    56   3e-06
ref|XP_013699975.1| PREDICTED: uncharacterized protein LOC106403...    55   9e-06

>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1369

 Score = 61.2 bits (147), Expect = 5e-08
 Identities = 44/168 (26%), Positives = 77/168 (45%), Gaps = 5/168 (2%)
 Frame = +1

Query: 7    ILWWLWKCRNLWIFQKIKMTEKYLVDRAYAEWMEF-----HIASCSKLNSGSEEVSSLPS 171
            I W +W  RN W+F+K K+  + +V+RA    MEF     H +    LN+     S  P 
Sbjct: 1156 ICWNIWLGRNKWVFEKKKLAFQEVVERAVRGVMEFEEECAHTSPVETLNTHENGWSVPPV 1215

Query: 172  DSVTHLVDSRVGLFVGMVSASTSLGVKAGLGGIFWSDDGQVQFVWRSSREQVYTPVEATL 351
              V   VD+ V   VG+           G+GG+    +G V          +  P  A  
Sbjct: 1216 GMVKLNVDAAVFKHVGI-----------GMGGVVRDAEGDVLLATCCGGWAMEDPAMAEA 1264

Query: 352  IAVRHALVKAHFFGWKKVQIQVDVKDIAVKLNNRVSFMSPCFAIAEDI 495
             ++R+ L  A+  G++ + +++D K + ++L  + S ++P   + +DI
Sbjct: 1265 CSLRYGLKVAYEAGFRNLVVEMDCKKLFLQLRGKASDVTPFGRVVDDI 1312


>ref|XP_009139324.1| PREDICTED: uncharacterized protein LOC103863319 [Brassica rapa]
           gi|923751268|ref|XP_013674511.1| PREDICTED:
           uncharacterized protein LOC106379026 [Brassica napus]
          Length = 375

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 45/165 (27%), Positives = 73/165 (44%)
 Frame = +1

Query: 4   YILWWLWKCRNLWIFQKIKMTEKYLVDRAYAEWMEFHIASCSKLNSGSEEVSSLPSDSVT 183
           +I+W +WK RN  +F+ I  +   ++ +A  E  E+  A                +D++T
Sbjct: 200 WIVWTIWKTRNQRVFENIHFSTVEVIHKAVIEAREWEEAQ---------------ADTIT 244

Query: 184 HLVDSRVGLFVGMVSASTSLGVKAGLGGIFWSDDGQVQFVWRSSREQVYTPVEATLIAVR 363
              D+          A       AGL  IF   +GQ+      + E V +P+ A  +A+R
Sbjct: 245 VNTDA----------AWREETKTAGLAWIFTDSNGQILQQGAMTEEWVISPLVAEGLAIR 294

Query: 364 HALVKAHFFGWKKVQIQVDVKDIAVKLNNRVSFMSPCFAIAEDIY 498
            AL +AH  G  K+ I+ D + I   +N R S     F I +DI+
Sbjct: 295 EALFQAHAIGINKLDIKSDAQIIIRAINGRESIKGR-FGILQDIH 338


>ref|XP_013699975.1| PREDICTED: uncharacterized protein LOC106403717 [Brassica napus]
          Length = 1045

 Score = 54.7 bits (130), Expect = 9e-06
 Identities = 45/169 (26%), Positives = 72/169 (42%), Gaps = 5/169 (2%)
 Frame = +1

Query: 4    YILWWLWKCRNLWIFQKIKMTEKYLVDRAYAEWMEFHIASCSKLNSGSEEVSSLPSDSVT 183
            +I W LW  RN  IF+   +T +  + RA     E+  A C     G  + ++ P  +V 
Sbjct: 841  WICWTLWTSRNQLIFENRAVTPEETLTRAIKLAREWQEAQCQ----GQSQTTTTPPLNVV 896

Query: 184  HLVDSRVGLFVGMVSASTSLGVK-----AGLGGIFWSDDGQVQFVWRSSREQVYTPVEAT 348
            H +++      G  +  T    K     AGLG IF    G        S   V +P+ A 
Sbjct: 897  HPIETTSRNNSGGTTVCTDAAWKEESNRAGLGWIFTDHAGDTITSESRSETFVPSPLMAE 956

Query: 349  LIAVRHALVKAHFFGWKKVQIQVDVKDIAVKLNNRVSFMSPCFAIAEDI 495
             +A+R AL+ A   G   + ++ D + +   +N+R   +   F I  DI
Sbjct: 957  SLAIREALLHARQMGISTLTVKSDAQTLVRAINDR-KLLKEMFGIFHDI 1004


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