BLASTX nr result
ID: Rehmannia27_contig00056454
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia27_contig00056454
(383 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|KYP62388.1| Retrovirus-related Pol polyprotein from transposo... 59 7e-08
emb|CAN73022.1| hypothetical protein VITISV_004050 [Vitis vinifera] 49 1e-07
gb|KYP47686.1| Copia protein, partial [Cajanus cajan] gi|1012336... 49 1e-07
gb|KOM30992.1| hypothetical protein LR48_Vigan01g054700 [Vigna a... 44 1e-07
gb|KYP62186.1| Copia protein, partial [Cajanus cajan] 45 2e-07
dbj|BAT74653.1| hypothetical protein VIGAN_01236300 [Vigna angul... 46 2e-07
gb|KYP41234.1| Retrovirus-related Pol polyprotein from transposo... 44 3e-07
emb|CAN70831.1| hypothetical protein VITISV_005284 [Vitis vinifera] 46 3e-07
gb|KYP52900.1| Retrovirus-related Pol polyprotein from transposo... 48 3e-07
gb|KYP63245.1| Copia protein [Cajanus cajan] 48 3e-07
emb|CAN64580.1| hypothetical protein VITISV_002159 [Vitis vinifera] 48 4e-07
gb|KYP54933.1| Copia protein [Cajanus cajan] 48 4e-07
emb|CAN71087.1| hypothetical protein VITISV_033973 [Vitis vinifera] 51 4e-07
gb|KYP41834.1| Copia protein [Cajanus cajan] 48 4e-07
emb|CAN61813.1| hypothetical protein VITISV_004517 [Vitis vinifera] 49 5e-07
emb|CAN77522.1| hypothetical protein VITISV_005922 [Vitis vinifera] 49 5e-07
gb|KYP73997.1| Copia protein [Cajanus cajan] 48 5e-07
gb|KYP62604.1| Copia protein [Cajanus cajan] 43 6e-07
emb|CAN71812.1| hypothetical protein VITISV_037409 [Vitis vinifera] 47 6e-07
emb|CAN60152.1| hypothetical protein VITISV_021503 [Vitis vinifera] 46 8e-07
>gb|KYP62388.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1362
Score = 59.3 bits (142), Expect = 7e-08
Identities = 36/101 (35%), Positives = 54/101 (53%), Gaps = 11/101 (10%)
Frame = -2
Query: 373 KAEYRAIAQGICELIWLERLLSDLNIKTDGPINFTVIVSQQEQIFTILFSMTE*ACLYRQ 194
+AEYRAIAQG+CELIW++RLL DL I P+ + S + I+ + + +
Sbjct: 1250 EAEYRAIAQGVCELIWIKRLLHDLFIPLQEPVK---LYSDSKSAINIVHNPVQHDRMKHV 1306
Query: 193 KFHQ-----------FSISYVPSGSQEDDIRTKPLLRVGFQ 104
+ + FS+ YVP+ QE D+ TK LL+ F+
Sbjct: 1307 RIDRNFIKSEMENGTFSLHYVPTKLQEADLLTKALLKSDFE 1347
>emb|CAN73022.1| hypothetical protein VITISV_004050 [Vitis vinifera]
Length = 767
Score = 49.3 bits (116), Expect(2) = 1e-07
Identities = 20/32 (62%), Positives = 27/32 (84%)
Frame = -2
Query: 373 KAEYRAIAQGICELIWLERLLSDLNIKTDGPI 278
K+E+R IAQG+CEL+WL+ +L DL IK DGP+
Sbjct: 655 KSEFRVIAQGLCELLWLKIILDDLRIKWDGPM 686
Score = 33.5 bits (75), Expect(2) = 1e-07
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = -1
Query: 278 KLYSDSKSARANIHNPIQHDR 216
KLY D+KSA HNPIQHDR
Sbjct: 687 KLYCDNKSAINIAHNPIQHDR 707
>gb|KYP47686.1| Copia protein, partial [Cajanus cajan] gi|1012336387|gb|KYP47689.1|
Copia protein, partial [Cajanus cajan]
Length = 203
Score = 49.3 bits (116), Expect(2) = 1e-07
Identities = 19/33 (57%), Positives = 28/33 (84%)
Frame = -2
Query: 376 LKAEYRAIAQGICELIWLERLLSDLNIKTDGPI 278
L+AE+RA+AQGICE +W++ +L DLN+K D P+
Sbjct: 109 LEAEFRALAQGICEGLWMKIILDDLNVKVDNPV 141
Score = 33.5 bits (75), Expect(2) = 1e-07
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = -1
Query: 278 KLYSDSKSARANIHNPIQHDR 216
+LY D+KSA + HNP+QHDR
Sbjct: 142 QLYCDNKSAMSIAHNPVQHDR 162
>gb|KOM30992.1| hypothetical protein LR48_Vigan01g054700 [Vigna angularis]
Length = 797
Score = 44.3 bits (103), Expect(3) = 1e-07
Identities = 17/32 (53%), Positives = 26/32 (81%)
Frame = -2
Query: 373 KAEYRAIAQGICELIWLERLLSDLNIKTDGPI 278
+AE+RA+AQG+CE +W++ +L DL IK D P+
Sbjct: 685 EAEFRALAQGMCEGLWMKIILDDLKIKIDSPV 716
Score = 32.7 bits (73), Expect(3) = 1e-07
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = -1
Query: 278 KLYSDSKSARANIHNPIQHDR 216
+LY D+KSA + HNP+QHDR
Sbjct: 717 QLYCDNKSAISIAHNPVQHDR 737
Score = 24.6 bits (52), Expect(3) = 1e-07
Identities = 21/64 (32%), Positives = 26/64 (40%), Gaps = 17/64 (26%)
Frame = -3
Query: 213 EHVCIDRNFINSAYPMCHLDHKKMI-----------------FEQNHYLGSGSKLRMIDI 85
+H+ IDR+FI +LD MI Q + SKL MIDI
Sbjct: 739 KHIEIDRHFIKD-----NLDRGFMITTHVPTGLQLADIFTKGLPQGRFQDLVSKLGMIDI 793
Query: 84 HSPT 73
H PT
Sbjct: 794 HLPT 797
>gb|KYP62186.1| Copia protein, partial [Cajanus cajan]
Length = 497
Score = 44.7 bits (104), Expect(3) = 2e-07
Identities = 17/32 (53%), Positives = 26/32 (81%)
Frame = -2
Query: 373 KAEYRAIAQGICELIWLERLLSDLNIKTDGPI 278
+AE+RA+AQG+CE +W++ +L DL IK D P+
Sbjct: 385 EAEFRALAQGMCEGLWMKIILDDLKIKVDNPV 416
Score = 33.5 bits (75), Expect(3) = 2e-07
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = -1
Query: 278 KLYSDSKSARANIHNPIQHDR 216
+LY D+KSA + HNP+QHDR
Sbjct: 417 QLYCDNKSAMSIAHNPVQHDR 437
Score = 22.7 bits (47), Expect(3) = 2e-07
Identities = 18/59 (30%), Positives = 25/59 (42%), Gaps = 12/59 (20%)
Frame = -3
Query: 213 EHVCIDRNFINSAYPM-----CHLDHKKMIFE-------QNHYLGSGSKLRMIDIHSPT 73
+H+ IDR+FI H+ + I + Q + KL MIDIH PT
Sbjct: 439 KHIEIDRHFIKDNLDRGFVITTHVPTELQIADIFTKGLPQGRFQDLVGKLGMIDIHLPT 497
>dbj|BAT74653.1| hypothetical protein VIGAN_01236300 [Vigna angularis var.
angularis]
Length = 195
Score = 45.8 bits (107), Expect(3) = 2e-07
Identities = 18/32 (56%), Positives = 26/32 (81%)
Frame = -2
Query: 373 KAEYRAIAQGICELIWLERLLSDLNIKTDGPI 278
+AE+RA+AQG+CE +W+E +L DL IK D P+
Sbjct: 83 EAEFRALAQGMCEGLWMEIILDDLKIKIDSPV 114
Score = 30.4 bits (67), Expect(3) = 2e-07
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = -1
Query: 278 KLYSDSKSARANIHNPIQHDR 216
+LY D+K A + HNP+QHDR
Sbjct: 115 QLYCDNKFAISIAHNPVQHDR 135
Score = 24.6 bits (52), Expect(3) = 2e-07
Identities = 21/64 (32%), Positives = 26/64 (40%), Gaps = 17/64 (26%)
Frame = -3
Query: 213 EHVCIDRNFINSAYPMCHLDHKKMI-----------------FEQNHYLGSGSKLRMIDI 85
+H+ IDR+FI +LD MI Q + SKL MIDI
Sbjct: 137 KHIEIDRHFIKD-----NLDRGFMITTHVPTGLQLADIFTKGLPQGRFQDLVSKLGMIDI 191
Query: 84 HSPT 73
H PT
Sbjct: 192 HLPT 195
>gb|KYP41234.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1406
Score = 44.3 bits (103), Expect(3) = 3e-07
Identities = 16/32 (50%), Positives = 26/32 (81%)
Frame = -2
Query: 373 KAEYRAIAQGICELIWLERLLSDLNIKTDGPI 278
+AE+RA+AQG+CE +W++ +L DL +K D P+
Sbjct: 1294 EAEFRALAQGMCEGLWMKIILDDLKVKVDNPV 1325
Score = 33.5 bits (75), Expect(3) = 3e-07
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = -1
Query: 278 KLYSDSKSARANIHNPIQHDR 216
+LY D+KSA + HNP+QHDR
Sbjct: 1326 QLYCDNKSAMSIAHNPVQHDR 1346
Score = 22.7 bits (47), Expect(3) = 3e-07
Identities = 18/59 (30%), Positives = 25/59 (42%), Gaps = 12/59 (20%)
Frame = -3
Query: 213 EHVCIDRNFINSAYPM-----CHLDHKKMIFE-------QNHYLGSGSKLRMIDIHSPT 73
+H+ IDR+FI H+ + I + Q + KL MIDIH PT
Sbjct: 1348 KHIEIDRHFIKDNLDRGFVITTHVPTELQITDIFTKGLPQGRFQDLVGKLGMIDIHLPT 1406
>emb|CAN70831.1| hypothetical protein VITISV_005284 [Vitis vinifera]
Length = 973
Score = 46.2 bits (108), Expect(2) = 3e-07
Identities = 19/31 (61%), Positives = 26/31 (83%)
Frame = -2
Query: 370 AEYRAIAQGICELIWLERLLSDLNIKTDGPI 278
+E+R IAQG+CEL+WL+ +L DL IK DGP+
Sbjct: 723 SEFRVIAQGLCELLWLKIILDDLIIKWDGPM 753
Score = 35.0 bits (79), Expect(2) = 3e-07
Identities = 15/21 (71%), Positives = 17/21 (80%)
Frame = -1
Query: 278 KLYSDSKSARANIHNPIQHDR 216
KLY D+KSA +HNPIQHDR
Sbjct: 754 KLYCDNKSAINIVHNPIQHDR 774
>gb|KYP52900.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 737
Score = 48.1 bits (113), Expect(2) = 3e-07
Identities = 20/32 (62%), Positives = 28/32 (87%)
Frame = -2
Query: 373 KAEYRAIAQGICELIWLERLLSDLNIKTDGPI 278
+AE+RA+AQGICEL+WL+ +L DL IK+D P+
Sbjct: 625 EAEFRAMAQGICELLWLKIILEDLRIKSDEPM 656
Score = 33.1 bits (74), Expect(2) = 3e-07
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = -1
Query: 278 KLYSDSKSARANIHNPIQHDR 216
+LY D+KSA + HNP+QHDR
Sbjct: 657 RLYCDNKSAISIAHNPVQHDR 677
>gb|KYP63245.1| Copia protein [Cajanus cajan]
Length = 195
Score = 48.1 bits (113), Expect(2) = 3e-07
Identities = 20/32 (62%), Positives = 28/32 (87%)
Frame = -2
Query: 373 KAEYRAIAQGICELIWLERLLSDLNIKTDGPI 278
+AE+RA+AQGICEL+WL+ +L DL IK+D P+
Sbjct: 83 EAEFRAMAQGICELLWLKIILEDLRIKSDEPM 114
Score = 33.1 bits (74), Expect(2) = 3e-07
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = -1
Query: 278 KLYSDSKSARANIHNPIQHDR 216
+LY D+KSA + HNP+QHDR
Sbjct: 115 RLYCDNKSAISIAHNPVQHDR 135
>emb|CAN64580.1| hypothetical protein VITISV_002159 [Vitis vinifera]
Length = 1453
Score = 47.8 bits (112), Expect(2) = 4e-07
Identities = 19/32 (59%), Positives = 28/32 (87%)
Frame = -2
Query: 373 KAEYRAIAQGICELIWLERLLSDLNIKTDGPI 278
+AE++A+AQG+CEL+WL+ +L DL IK DGP+
Sbjct: 1341 EAEFQAMAQGVCELLWLKIVLEDLKIKWDGPM 1372
Score = 33.1 bits (74), Expect(2) = 4e-07
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = -1
Query: 278 KLYSDSKSARANIHNPIQHDR 216
+LY D+KSA + HNP+QHDR
Sbjct: 1373 RLYCDNKSAISIAHNPVQHDR 1393
>gb|KYP54933.1| Copia protein [Cajanus cajan]
Length = 253
Score = 47.8 bits (112), Expect(2) = 4e-07
Identities = 20/32 (62%), Positives = 27/32 (84%)
Frame = -2
Query: 373 KAEYRAIAQGICELIWLERLLSDLNIKTDGPI 278
+AE+RA+AQGICEL+WL+ +L DL I DGP+
Sbjct: 141 EAEFRAMAQGICELLWLKIILEDLKITWDGPM 172
Score = 33.1 bits (74), Expect(2) = 4e-07
Identities = 14/21 (66%), Positives = 16/21 (76%)
Frame = -1
Query: 278 KLYSDSKSARANIHNPIQHDR 216
KLY D+KSA HNP+QHDR
Sbjct: 173 KLYCDNKSAINIAHNPVQHDR 193
>emb|CAN71087.1| hypothetical protein VITISV_033973 [Vitis vinifera]
Length = 243
Score = 51.2 bits (121), Expect(2) = 4e-07
Identities = 21/35 (60%), Positives = 29/35 (82%)
Frame = -2
Query: 382 NYLKAEYRAIAQGICELIWLERLLSDLNIKTDGPI 278
++ K E+RAIAQG+CEL+WL+ +L DL IK DGP+
Sbjct: 128 SFTKLEFRAIAQGLCELLWLKIILDDLRIKWDGPM 162
Score = 29.6 bits (65), Expect(2) = 4e-07
Identities = 14/21 (66%), Positives = 14/21 (66%)
Frame = -1
Query: 278 KLYSDSKSARANIHNPIQHDR 216
KLY D KSA HN IQHDR
Sbjct: 163 KLYCDKKSAINIAHNRIQHDR 183
>gb|KYP41834.1| Copia protein [Cajanus cajan]
Length = 243
Score = 47.8 bits (112), Expect(2) = 4e-07
Identities = 20/32 (62%), Positives = 27/32 (84%)
Frame = -2
Query: 373 KAEYRAIAQGICELIWLERLLSDLNIKTDGPI 278
+AE+RA+AQGICEL+WL+ +L DL I DGP+
Sbjct: 131 EAEFRAMAQGICELLWLKIILEDLKITWDGPM 162
Score = 33.1 bits (74), Expect(2) = 4e-07
Identities = 14/21 (66%), Positives = 16/21 (76%)
Frame = -1
Query: 278 KLYSDSKSARANIHNPIQHDR 216
KLY D+KSA HNP+QHDR
Sbjct: 163 KLYCDNKSAINIAHNPVQHDR 183
>emb|CAN61813.1| hypothetical protein VITISV_004517 [Vitis vinifera]
Length = 471
Score = 48.9 bits (115), Expect(2) = 5e-07
Identities = 19/35 (54%), Positives = 29/35 (82%)
Frame = -2
Query: 382 NYLKAEYRAIAQGICELIWLERLLSDLNIKTDGPI 278
++ ++E+R IAQG+CEL+WL+ +L DL IK DGP+
Sbjct: 195 SFAESEFRVIAQGLCELLWLKIILDDLRIKWDGPM 229
Score = 31.6 bits (70), Expect(2) = 5e-07
Identities = 14/21 (66%), Positives = 15/21 (71%)
Frame = -1
Query: 278 KLYSDSKSARANIHNPIQHDR 216
KLY D+KS HNPIQHDR
Sbjct: 230 KLYCDNKSXINIAHNPIQHDR 250
>emb|CAN77522.1| hypothetical protein VITISV_005922 [Vitis vinifera]
Length = 326
Score = 48.9 bits (115), Expect(2) = 5e-07
Identities = 19/35 (54%), Positives = 29/35 (82%)
Frame = -2
Query: 382 NYLKAEYRAIAQGICELIWLERLLSDLNIKTDGPI 278
++ ++E+R IAQG+CEL+WL+ +L DL IK DGP+
Sbjct: 253 SFAESEFRVIAQGLCELLWLKIILDDLRIKWDGPM 287
Score = 31.6 bits (70), Expect(2) = 5e-07
Identities = 14/20 (70%), Positives = 15/20 (75%)
Frame = -1
Query: 278 KLYSDSKSARANIHNPIQHD 219
KLY D+KSA HNPIQHD
Sbjct: 288 KLYCDNKSAINIAHNPIQHD 307
>gb|KYP73997.1| Copia protein [Cajanus cajan]
Length = 258
Score = 48.1 bits (113), Expect(2) = 5e-07
Identities = 20/32 (62%), Positives = 28/32 (87%)
Frame = -2
Query: 373 KAEYRAIAQGICELIWLERLLSDLNIKTDGPI 278
+AE+RA+AQGICEL+WL+ +L DL IK+D P+
Sbjct: 147 EAEFRAMAQGICELLWLKIILEDLRIKSDEPM 178
Score = 32.3 bits (72), Expect(2) = 5e-07
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = -1
Query: 278 KLYSDSKSARANIHNPIQHDR 216
+LY D+KSA + HNP+QHDR
Sbjct: 179 RLYCDNKSAISIAHNPMQHDR 199
>gb|KYP62604.1| Copia protein [Cajanus cajan]
Length = 283
Score = 42.7 bits (99), Expect(3) = 6e-07
Identities = 15/32 (46%), Positives = 26/32 (81%)
Frame = -2
Query: 373 KAEYRAIAQGICELIWLERLLSDLNIKTDGPI 278
+A++RA+AQG+CE +W++ +L DL +K D P+
Sbjct: 171 EAKFRALAQGMCEGLWMKIILDDLKVKVDNPV 202
Score = 32.3 bits (72), Expect(3) = 6e-07
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = -1
Query: 278 KLYSDSKSARANIHNPIQHDRM 213
+LY D+KS + HNP+QHDR+
Sbjct: 203 QLYCDNKSVMSIAHNPVQHDRI 224
Score = 24.3 bits (51), Expect(3) = 6e-07
Identities = 19/59 (32%), Positives = 26/59 (44%), Gaps = 12/59 (20%)
Frame = -3
Query: 213 EHVCIDRNFINSAYPM-----CHLDHKKMIFE-------QNHYLGSGSKLRMIDIHSPT 73
+H+ IDR+FI H+ + I + Q + SKL MIDIH PT
Sbjct: 225 KHIEIDRHFIKDNLDRGFVITTHVPTELQIADSFTKGLPQGRFQDLVSKLGMIDIHLPT 283
>emb|CAN71812.1| hypothetical protein VITISV_037409 [Vitis vinifera]
Length = 621
Score = 47.0 bits (110), Expect(2) = 6e-07
Identities = 19/32 (59%), Positives = 27/32 (84%)
Frame = -2
Query: 373 KAEYRAIAQGICELIWLERLLSDLNIKTDGPI 278
+AE+RA+AQG+C L+WL+ +L DL IK DGP+
Sbjct: 509 EAEFRAMAQGVCXLLWLKIVLEDLKIKWDGPM 540
Score = 33.1 bits (74), Expect(2) = 6e-07
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = -1
Query: 278 KLYSDSKSARANIHNPIQHDR 216
+LY D+KSA + HNP+QHDR
Sbjct: 541 RLYCDNKSAISIAHNPVQHDR 561
>emb|CAN60152.1| hypothetical protein VITISV_021503 [Vitis vinifera]
Length = 890
Score = 46.2 bits (108), Expect(2) = 8e-07
Identities = 18/33 (54%), Positives = 28/33 (84%)
Frame = -2
Query: 376 LKAEYRAIAQGICELIWLERLLSDLNIKTDGPI 278
+++E+R IAQG+CEL+W + +L+DL IK DGP+
Sbjct: 761 VESEFRVIAQGLCELLWPKIILNDLRIKXDGPM 793
Score = 33.5 bits (75), Expect(2) = 8e-07
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = -1
Query: 278 KLYSDSKSARANIHNPIQHDR 216
KLY D+KSA HNPIQHDR
Sbjct: 794 KLYCDNKSAINIAHNPIQHDR 814