BLASTX nr result

ID: Rehmannia27_contig00056218 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia27_contig00056218
         (509 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_012069482.1| PREDICTED: F-box/kelch-repeat protein At3g06...    56   3e-06
gb|EEF45421.1| ubiquitin-protein ligase, putative [Ricinus commu...    55   8e-06

>ref|XP_012069482.1| PREDICTED: F-box/kelch-repeat protein At3g06240-like isoform X1
           [Jatropha curcas]
          Length = 516

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 34/105 (32%), Positives = 56/105 (53%)
 Frame = -3

Query: 492 EVDLRAHNGMLCLIHFKRGCADIWVMENYGQLESWTKLYHNVCCPGNFQMRPIGLTHNEQ 313
           E D+ +HN             D WVM++YG+ ESWTK+  ++     F+M+P+GL    +
Sbjct: 425 ESDMTSHN-------------DFWVMKSYGRSESWTKIVISI---SYFRMKPLGLFGKHR 468

Query: 312 VVMEIQQRRIDVYDPRTRIFSHKSMYTYHVNAEFGAATYVESLVS 178
            ++EI  + + +Y+ +   +    ++   V  EF A  YVESLVS
Sbjct: 469 ALLEIDGKLV-MYNFKEDTYQDLIIHGIPVGIEFEAERYVESLVS 512


>gb|EEF45421.1| ubiquitin-protein ligase, putative [Ricinus communis]
          Length = 358

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 30/84 (35%), Positives = 46/84 (54%)
 Frame = -3

Query: 429 DIWVMENYGQLESWTKLYHNVCCPGNFQMRPIGLTHNEQVVMEIQQRRIDVYDPRTRIFS 250
           D WVM+ YG  +SWTK+  N+     F+M+P+G+  N + ++EI  + + +Y  R   + 
Sbjct: 265 DFWVMKRYGIRDSWTKVVINI---SYFRMKPLGVFDNHKALLEIDGKLV-LYSFREGTYQ 320

Query: 249 HKSMYTYHVNAEFGAATYVESLVS 178
              +    V  EF   TY ESLVS
Sbjct: 321 DLVIQGIPVGIEFDVETYAESLVS 344


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